Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0004270 | OGI:10017750 | 12/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:5843642-5849260 | ||||||||
| Gene Symbol | WAK108, OsWAK108 | ||||||||||
| DNA seq | tcacgcatcagtgtgttttatttgtgatctcttcatgccttgaagacattctgctatttctatcatctcttgccttttgttcacttcgagtttaagacattcagcgatgacccttacaaatttatgaagtaattccatatccctttccactataatatctttgtcaagtaattcaattattgctgcttccccatctgaatatgcatcaagaaacattttaacgagcctgttgttttcaccggtagctgcctttcgtcttgttaggagttccaatagcataacaccaaaactgtatacatcattctgctttgttaacaggcctgactgaagaaatattgggtccatatagcatatgtctcctgcaacacgtgtagtgtgtgttctatctattgcaatcagccttgagattccaaagtcagaaatttttggatcaaagttagaatccaaaagaatattaccaggtttgatatcaccgtgcaaaatagtggaagaagtcttcgagtgcatataagccaacccttctgctgctcctgcagcaatgtttaaacgtttgtctaaattaaggctcattttattgcttccgtgtaaaatgtcgtgaaggcttccctgtggaacaaactcgtagaccagtagtggaacatcaacctctagacaacaaccaatgagcttgacaatgttcttgtggatgactcgtgactggattatgatttcatttgcaaactgctgctcctgaaatttgtccacacggatggatttctttattgcaactacttgattatcaagcagacccttgtaaacctctccaaatccaccttttccgattacattagacttctgtattattggcttaagctcctcttttttgaataacttaatattattaacatgttcaagtatcggaccaccattttttaggaaaaactctctggtctttcttttctctgccagtagaagattgaacaagactataataacagtgatggacgtcagcccacctacacctgaaatatgtgttgccagatctggacttatcatttacggagtaggaaaatatatgaataaagtattttagtaatctaaatttaatgctcagcatatatttgggatgtagtgcagaaaattacaagagtactttatttgaataataagtgttgcactggtattattgaattttagttgttggtccagtatgtcattacgggcacctaggtaataaagtgaacacattagagcaatatgattatgaaactaaaatactccctccgtttcatatttcatattataagtcgctttgaattttttttatagtaatttttctttaaatttgatcaagtttatagaaaaatgtagaaatattttcaacatcataactaaacttttatataaacttgatcaaatttaaaaaaaattgattaaggaaaagtcaaaacgacttataatatgaaactgatgtagtatcattttgtcgtatgcttctacataatatttgggtaaattttaaaaaaataccggtaccagtaacgacaataataattttatgataacttaattagtaaatctacagttttacgatacctttatcttaaatagtagtttggtgatacatgttgatgctaattaagtatgtagtttcaagacaagatgccttaaatatgagttttgcgatagtttaattaaagtagttgtagttttgcaaaattaatatataatattttgatttgttttgatgagaaataaacaaaagcaggtccaattcatagttaattacagttcatcccagggaatgattctcgtatttaatcattcattcatgttgctcttaagttgttaccaatggtttatctatagttactactatacaccaaccattttttctttagatgacgttgattagttgaaactaaccaatgtcaaatataaaaatggagatattatataatttggtaaaacggaggctgaaaatgtgaacttctccgttatctgaaacactaaatttgagaaacatgcaactgatagttgcacaccattgacctctatcatttttcccccaagaaataaagatttatattccctttgtcgtttacatatttacatttatattgggtatatatctcaccttttattggttttggtagaaatgatatgatcaatttcaaacacattaattgaaaatgagcacagaaaataccattaatactgctacaggacatgtagttaatatacaaagcatcagaactcttgtatggcaaaattaaaacaagatgcttaccgactgtagtgacaactgccaggaggggaaacacctgtgtgcatgttccaatttttgcatcaccttttgtgccaaatttgcagtgacaatcgtagccccctatcttattcttgcatttcccatggcaaggatatatatcttgtaactctggttgttcatctcgaagaacacattcgtcgatatctgtaagtacactaaattagttaatggcacaccagagagaaaactcacttggcactgaactggtccaaaattcaaattagatccaatctaatttgaattttggaccagtttttcaagtagctgtcattgagttttgaatataagattgaccatttatcttattcaccaaaattaaatatgtgattataatttatttgttatgatttactttatcactaatggcagtttaagcataacttataagaaaacatccaaatacggccctaactattgcttggaagtatatagcacctaaactttaaaatcagacattcaacttccaaaatttacaataccatttatataataatctatataaccctaagggtggttttgttaagtagttttatattttgtttgtatatacataggatgagtttgactaagtgacatacacattggacatatgtgttaaaatcattagccaaatatttctttttcccccttttgcttgcattaacaaatgaataccaacataatattaccatgcatgacatcactgcagagtataaattaagaactatcgatatataaatatgttttataagttattgaaaaccactcatttaagcttccaaatacgcaaaaccatcgcctactgccacatttggagataatataaatgttattgtaaagagttccaaatacaccccctaattttagatggaaatctatttggcactctaaacactaaaccggacatccaccccagaattttacaataccattcatattaccccttaaggtgattttaggtagtggttttgcatacttgggatcttaaacaagtggctttaaacaactaatacaatatatttacgtgcgatcaattataggctagcaattgatactatacagtttaggggactgaatgtttagtttcgaacattaggatactatatggattttcaataaaagtttagcgggttacttgtactttttccaatgatattccaatgttttgtaggttagatgtccagttttaaatttcatttttgctgaatagattttcacccaaagtttagggaatatatggactttttcctaacctatatttttcatacttgcacagattgttttgaataagttaaaagaacaaacatatgaaaacaatcaacgacatcatatattgaaaccagatggagtattccatttttttaaaaaaacacagaacttaccaatttttatactattacgtacatttatgaaaatctgcaaaagttaaattttaattaagttcaaaacttttgctaactttggcagaaattaaataaataataataattcgatacaacaaatggtgatccggatcccgcaggtgaaagtacataaagtttgtgttagttgagtaatttcacaccttcctcctttgatatatctctaaatttggttaaagttgattgaaagaaattaggaaagtatttgtgatgagatggtgtatgttatcatcgtgtgtagaaatattataatccgaaattggggaggtcagtgaacattagttgatggttgactctctatgtttgaactggtgataagagcaaggttaatagtgtagccagctgctggtgagagatttttagttcgaatcctacatcccacactttatttttttgacttcgtatgtatctttagtactgggctaccggttatttcaacctgtactaagatctcgatttgctacaattggttctacaactgttactaaaatggttcccaaccggtgtcaaaactcagttctccactagtgtaagttaataacatatcactactacaaattatataatctcttaatattagtagtactgatacgttacattccgtagtagattaatttaatttggaacggaacgagtactagataggtgccattgttttggctgtctgaatttggaatttcacgtatagtactatgttcatctacaccatggaaacattagtctattcgaaaaatgctacgacactacagtctatatataaacacagagaaattttatggttcttgacaagaggtaccaaattttcttagcgtaaatttttttaccaaattgaacgaaaaatagcctgctataattactttcaaattacagcctgctgccacattctttttccaatgacagtaaagtcggtgacacatgtatatacataccttggcatccatcagggaggtatgggttgccgtcgaaaccatccttgcacttgcagaggtatcccgggccataggtggcgttgacacaacggctgttgccgctgcggcaagccgtcggcaacgtcttcccatccgccggacacgaatcattcctgatggcgaagtcgagcacgatggggacgccgcgtggaaacttgtggtaatcgcgttggccgtagatgtcctgcaacgagaagttgtaccacgacctgtccacggccatggcgtaggtgcacgggaaggtctcccacatggtgttcctctgccgcctcacgccgacgccgagttcgctgagccccggcgggaagtccgcctcgcagcagccgagccccgagcacgagccgttctgcgccgccgacggctcgtcgaagagcgaggtgcacgacgccgagtagttgctgctggtcaggccgccctcgacacgggcctggacgctctggccgacgccgaccagcgcgttccgcgtcgacgagaagaggaacgtgtcggtgaagttgacggtcatgacgaagatgctgagcgcgtggtaggtgtcgttggcgctgcagtcggagctcaccggcatggacacccgggcctcgccgcccacgacgtcgatgtcgacgaggtcgaccgtcgaccacgtcttgttcgtcacgatgccgaccgccgggtcgtcgctgttgccgaggtagtagccggtcatgttgtacacctgcggcacgccgagggtggcctggaacgcggtgcgctcgtcgcagatgacggagaagctgccgtcgaagtagcagccttccttgacgccgaatgggtaggggatgctgatgttgtcgcacctgtctgggcatccagggagagtgatcggccgctgttgattggcgccgacggcggccatggtcagaatggcaacgacggctagccggagtagcatttccagcaaatgacttttgggtctagctgacat
More
|
||||||||||
| CDS seq | atgtcagctagacccaaaagtcatttgctggaaatgctactccggctagccgtcgttgccattctgaccatggccgccgtcggcgccaatcaacagcggccgatcactctccctggatgcccagacaggtgcgacaacatcagcatcccctacccattcggcgtcaaggaaggctgctacttcgacggcagcttctccgtcatctgcgacgagcgcaccgcgttccaggccaccctcggcgtgccgcaggtgtacaacatgaccggctactacctcggcaacagcgacgacccggcggtcggcatcgtgacgaacaagacgtggtcgacggtcgacctcgtcgacatcgacgtcgtgggcggcgaggcccgggtgtccatgccggtgagctccgactgcagcgccaacgacacctaccacgcgctcagcatcttcgtcatgaccgtcaacttcaccgacacgttcctcttctcgtcgacgcggaacgcgctggtcggcgtcggccagagcgtccaggcccgtgtcgagggcggcctgaccagcagcaactactcggcgtcgtgcacctcgctcttcgacgagccgtcggcggcgcagaacggctcgtgctcggggctcggctgctgcgaggcggacttcccgccggggctcagcgaactcggcgtcggcgtgaggcggcagaggaacaccatgtgggagaccttcccgtgcacctacgccatggccgtggacaggtcgtggtacaacttctcgttgcaggacatctacggccaacgcgattaccacaagtttccacgcggcgtccccatcgtgctcgacttcgccatcaggaatgattcgtgtccggcggatgggaagacgttgccgacggcttgccgcagcggcaacagccgttgtgtcaacgccacctatggcccgggatacctctgcaagtgcaaggatggtttcgacggcaacccatacctccctgatggatgccaagatatcgacgaatgtgttcttcgagatgaacaaccagagttacaagatatatatccttgccatgggaaatgcaagaataagatagggggctacgattgtcactgcaaatttggcacaaaaggtgatgcaaaaattggaacatgcacacaggtgtttcccctcctggcagttgtcactacagtcggtgtaggtgggctgacgtccatcactgttattatagtcttgttcaatcttctactggcagagaaaagaaagaccagagagtttttcctaaaaaatggtggtccgatacttgaacatgttaataatattaagttattcaaaaaagaggagcttaagccaataatacagaagtctaatgtaatcggaaaaggtggatttggagaggtttacaagggtctgcttgataatcaagtagttgcaataaagaaatccatccgtgtggacaaatttcaggagcagcagtttgcaaatgaaatcataatccagtcacgagtcatccacaagaacattgtcaagctcattggttgttgtctagaggttgatgttccactactggtctacgagtttgttccacagggaagccttcacgacattttacacggaagcaataaaatgagccttaatttagacaaacgtttaaacattgctgcaggagcagcagaagggttggcttatatgcactcgaagacttcttccactattttgcacggtgatatcaaacctggtaatattcttttggattctaactttgatccaaaaatttctgactttggaatctcaaggctgattgcaatagatagaacacacactacacgtgttgcaggagacatatgctatatggacccaatatttcttcagtcaggcctgttaacaaagcagaatgatgtatacagttttggtgttatgctattggaactcctaacaagacgaaaggcagctaccggtgaaaacaacaggctcgttaaaatgtttcttgatgcatattcagatggggaagcagcaataattgaattacttgacaaagatattatagtggaaagggatatggaattacttcataaatttgtaagggtcatcgctgaatgtcttaaactcgaagtgaacaaaaggcaagagatgatagaaatagcagaatgtcttcaaggcatgaagagatcacaaataaaacacactgatgcgtga
More
|
||||||||||
| Protein seq | MSARPKSHLLEMLLRLAVVAILTMAAVGANQQRPITLPGCPDRCDNISIPYPFGVKEGCYFDGSFSVICDERTAFQATLGVPQVYNMTGYYLGNSDDPAVGIVTNKTWSTVDLVDIDVVGGEARVSMPVSSDCSANDTYHALSIFVMTVNFTDTFLFSSTRNALVGVGQSVQARVEGGLTSSNYSASCTSLFDEPSAAQNGSCSGLGCCEADFPPGLSELGVGVRRQRNTMWETFPCTYAMAVDRSWYNFSLQDIYGQRDYHKFPRGVPIVLDFAIRNDSCPADGKTLPTACRSGNSRCVNATYGPGYLCKCKDGFDGNPYLPDGCQDIDECVLRDEQPELQDIYPCHGKCKNKIGGYDCHCKFGTKGDAKIGTCTQVFPLLAVVTTVGVGGLTSITVIIVLFNLLLAEKRKTREFFLKNGGPILEHVNNIKLFKKEELKPIIQKSNVIGKGGFGEVYKGLLDNQVVAIKKSIRVDKFQEQQFANEIIIQSRVIHKNIVKLIGCCLEVDVPLLVYEFVPQGSLHDILHGSNKMSLNLDKRLNIAAGAAEGLAYMHSKTSSTILHGDIKPGNILLDSNFDPKISDFGISRLIAIDRTHTTRVAGDICYMDPIFLQSGLLTKQNDVYSFGVMLLELLTRRKAATGENNRLVKMFLDAYSDGEAAIIELLDKDIIVERDMELLHKFVRVIAECLKLEVNKRQEMIEIAECLQGMKRSQIKHTDA |
||||||||||
| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0004270 | OsLima_10g0004270.01 | Chr10 | 5843642 | 5849260 | - | NAM | ||
| CDS seq | atgtcagctagacccaaaagtcatttgctggaaatgctactccggctagccgtcgttgccattctgaccatggccgccgtcggcgccaatcaacagcggccgatcactctccctggatgcccagacaggtgcgacaacatcagcatcccctacccattcggcgtcaaggaaggctgctacttcgacggcagcttctccgtcatctgcgacgagcgcaccgcgttccaggccaccctcggcgtgccgcaggtgtacaacatgaccggctactacctcggcaacagcgacgacccggcggtcggcatcgtgacgaacaagacgtggtcgacggtcgacctcgtcgacatcgacgtcgtgggcggcgaggcccgggtgtccatgccggtgagctccgactgcagcgccaacgacacctaccacgcgctcagcatcttcgtcatgaccgtcaacttcaccgacacgttcctcttctcgtcgacgcggaacgcgctggtcggcgtcggccagagcgtccaggcccgtgtcgagggcggcctgaccagcagcaactactcggcgtcgtgcacctcgctcttcgacgagccgtcggcggcgcagaacggctcgtgctcggggctcggctgctgcgaggcggacttcccgccggggctcagcgaactcggcgtcggcgtgaggcggcagaggaacaccatgtgggagaccttcccgtgcacctacgccatggccgtggacaggtcgtggtacaacttctcgttgcaggacatctacggccaacgcgattaccacaagtttccacgcggcgtccccatcgtgctcgacttcgccatcaggaatgattcgtgtccggcggatgggaagacgttgccgacggcttgccgcagcggcaacagccgttgtgtcaacgccacctatggcccgggatacctctgcaagtgcaaggatggtttcgacggcaacccatacctccctgatggatgccaagatatcgacgaatgtgttcttcgagatgaacaaccagagttacaagatatatatccttgccatgggaaatgcaagaataagatagggggctacgattgtcactgcaaatttggcacaaaaggtgatgcaaaaattggaacatgcacacaggtgtttcccctcctggcagttgtcactacagtcggtgtaggtgggctgacgtccatcactgttattatagtcttgttcaatcttctactggcagagaaaagaaagaccagagagtttttcctaaaaaatggtggtccgatacttgaacatgttaataatattaagttattcaaaaaagaggagcttaagccaataatacagaagtctaatgtaatcggaaaaggtggatttggagaggtttacaagggtctgcttgataatcaagtagttgcaataaagaaatccatccgtgtggacaaatttcaggagcagcagtttgcaaatgaaatcataatccagtcacgagtcatccacaagaacattgtcaagctcattggttgttgtctagaggttgatgttccactactggtctacgagtttgttccacagggaagccttcacgacattttacacggaagcaataaaatgagccttaatttagacaaacgtttaaacattgctgcaggagcagcagaagggttggcttatatgcactcgaagacttcttccactattttgcacggtgatatcaaacctggtaatattcttttggattctaactttgatccaaaaatttctgactttggaatctcaaggctgattgcaatagatagaacacacactacacgtgttgcaggagacatatgctatatggacccaatatttcttcagtcaggcctgttaacaaagcagaatgatgtatacagttttggtgttatgctattggaactcctaacaagacgaaaggcagctaccggtgaaaacaacaggctcgttaaaatgtttcttgatgcatattcagatggggaagcagcaataattgaattacttgacaaagatattatagtggaaagggatatggaattacttcataaatttgtaagggtcatcgctgaatgtcttaaactcgaagtgaacaaaaggcaagagatgatagaaatagcagaatgtcttcaaggcatgaagagatcacaaataaaacacactgatgcgtga
More
|
|||||||
| Protein seq | MSARPKSHLLEMLLRLAVVAILTMAAVGANQQRPITLPGCPDRCDNISIPYPFGVKEGCYFDGSFSVICDERTAFQATLGVPQVYNMTGYYLGNSDDPAVGIVTNKTWSTVDLVDIDVVGGEARVSMPVSSDCSANDTYHALSIFVMTVNFTDTFLFSSTRNALVGVGQSVQARVEGGLTSSNYSASCTSLFDEPSAAQNGSCSGLGCCEADFPPGLSELGVGVRRQRNTMWETFPCTYAMAVDRSWYNFSLQDIYGQRDYHKFPRGVPIVLDFAIRNDSCPADGKTLPTACRSGNSRCVNATYGPGYLCKCKDGFDGNPYLPDGCQDIDECVLRDEQPELQDIYPCHGKCKNKIGGYDCHCKFGTKGDAKIGTCTQVFPLLAVVTTVGVGGLTSITVIIVLFNLLLAEKRKTREFFLKNGGPILEHVNNIKLFKKEELKPIIQKSNVIGKGGFGEVYKGLLDNQVVAIKKSIRVDKFQEQQFANEIIIQSRVIHKNIVKLIGCCLEVDVPLLVYEFVPQGSLHDILHGSNKMSLNLDKRLNIAAGAAEGLAYMHSKTSSTILHGDIKPGNILLDSNFDPKISDFGISRLIAIDRTHTTRVAGDICYMDPIFLQSGLLTKQNDVYSFGVMLLELLTRRKAATGENNRLVKMFLDAYSDGEAAIIELLDKDIIVERDMELLHKFVRVIAECLKLEVNKRQEMIEIAECLQGMKRSQIKHTDA
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0174800 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g09700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0174800 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0004340 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0004280 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004210 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0004530 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0004280 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0087700 | RBH | 0.0128745 | 0.018406 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0004420 | RBH | 0.0 | 0.071726 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0098700 | RBH | 0.0309355 | 0 | 0.0053305 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0004310 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0004430 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0004180 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0004520 | RBH | 0.0 | 0.688513 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G004370 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0004420 | RBH | 0.0 | 0.0 | 0.0 |
