Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0174800 | OGI:10012470 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:5201057-5203914 | ||||||||
| Gene Symbol | WAK108, OsWAK108 | ||||||||||
| DNA seq | TCAGGCTGCAGTTCTATCCACAACGACGGGAACCTGGGCAGCAGCCTCGTCGAGGGGATCCTCTGGTATATGCTGGCGAGTACAGCCGAGTACACAGTTTTTTCTTTGAAGACCATATAAGCACGTCTGGCCGTAAATCAAACGTTTGACTGAGTTTATATAAAAATATAATTCACCCTTATGGTTATCTTAATAAAATGAAGTTTTTAAGGAGCTCAGTTTTTTTTTCGCCGTTCATTATACTAGGAAGCAATGGTACGTGTGATCTATTAGGGCATGCACAACGGTATTATTATCTTAAAAAAAAGTATAACGGTATCTAATAACGGGCTCTTTTTCCGATGTGGAAGAGAGAGGGGAAGGAAAGGGAAACATAGTTGCTACGCATTACAACGGTTTTAGTCGACTCTTAGCATTTATTAGATAAAATTTTATTGCATGGGGTTAAAGAAAAGGAAACTAGGGTAATAAAAACTTACTTTCGTGCATTAATGGGTAAGATGTTTTGTTGTCTTAATTATTATAGAAAAAGTCTCTAAAAGCAAGTTTTACAGTGGAGGTTGATGTCACCTCTAATTTAAATCATATCATCTACTCATTAATTAAGAGGTAACAAGTACAACGTATCACATCTAATACACAAACCCTAACACCATCGTGCACTTTGCTTGAAAATTATGTGGAAGTTATCCCTTGCATGAGGAATGGCTTATTTTCTCTCCTAACTTCTTTCCTCTACGTCATTATCTAATCCTATGTGGCAAATTTTATGAGCAACATATAGGAGCTGATATGACTTGCTCTAAGTGATATGTATTAACTAAGAGCCTAAATCGAACTCTAGCTTTTTACATGCCCTTATCTGGTTGGAGGTAATACCTCAGAATAAGGAATGAAATATATCCCTTAATGTGCCATTAAAATTAACACTGTTCATAGGACACGTGGTGTAATTTGTAAAACTATATCACATATTTCTGTTTACAAATTTGAAATACAAATATGCCAATTATGTTTAGCACCCTGAATATAATTTGTTTGAATCAAATCTCAATCATATTTAAAATCAAGACTGGACCATAAAGGCAAGTCTTTTCTAATCTGATTTGAGAACACTAAAATATATAGACACTTAGAAAAGTATTATGCGATTTCTAATTTAAATGTATAGTAAAAAAATTGTGATGTACAGTATTTAAATTATATTCATGTATGATTTCACATATACATATTTTAAGAATAAATTGACGTGCTCATCTTCATTTCAATACATATCTATAGTTCCTAACTTCTACAAGCTTGCATAATTGAGTTATGGAAGGGCAATTAATGAGCGTTGGTCTTTTTAATTTTTTCTGTGATATATTAAATGAAAGGAGCAATTATATTTTTCTTAGGAAAAATATACTAGTAACAATTGTAGCCTGTTACATCCCTAGAGGTATGTTGGAGTACTGTAAAAGGGTTCTACAAGAATAAAGTCCACCCGGGACAAGTGCCCTTGTACCACACCATATGCTCCCAAAAATTTGTGAGCCTATCAATTACGGGTTGCGTTCTCTACTCAGTGTTCTCAACTTCATCCCACTTGTCTTTCACTCGTACGTCTCCTAAACGGTTAAACGGTGCGTATTTTTTAAAAAAATTATATAGAAAAGTTATTTTAAAAATCATATTAATCCATTTTAAAAAATAGCTAATATTTAATTAATCATGCACTAATGAGTCGCTTCGTTTTGCGTACGTGAGAGATGAGTTCCCAACTTAGTTTGTCTAACTCAGCCAAGTAGAGCTATTACAAAGCTACATATTGCATTCTTGTATAATCATTATAAATGCTTAGATCATAGTAGAATGGTTATTTTCTAGGATCATTAGATGTATTTCGAAACGAAGTGTTTTCTTGACTGTAAAGCAATAGTATATATGTAGAACGGTTCTTTTCGAAACGAAGTTGTTGATGAAGGGATTTGTATCCATGCATTATGAGTTCCTTCATGATGGCAGAAAAATATCACCGCGAATATAATGTCACGTACCTACAACAATCTTAGCCTGTAAAGGAAATTTCTCTGAGCAAGTTCCTGCTTTGCCATCACCGCTCATTCCACGTTTGCATGGACAATCATATCCGCCTGGTCTGTTCATGCAGATTCCATTTCTTGAACAAGGATACAGGACTCGGAGCTCAGGATGGCTATCTCGGAGGGCACATTCATCAATATCTGTGCGCAAACAGCAATTAATTTTCACATATCCGTGTACTCATGGTGTAATATTGTTATACTCCCTCCATATTTTAATGTATGACGCCGTTAACTTTTTAACCAACGTTTGACCATTCATCTTATTCAAAAATTTTATGCAAATATAAAAATACTTATGTCATGCTTAAAGAGCATTTGATGATAAATCAAGTCACAATAAAATAAATTATAATTACATAAAATTTTTGAATAAAACGAAAGGTCAAACGTTTGTCAAAAAGTCAACGGCGTCGTACATTAAAATACGGAGTGAGTATATCACATCAATGTCATCAAGAACGATAATATATGGATGTAGAGTTACAGAGAGGAGGAGAACGCACCATGACATCCGTTAGGTATGTAAGGATTCCCATCATATCCCTTACTACAGTTGCAGATGTAACCATCACCGTTGGTCACGTTGACGCATGAGCTGTTGCTGCTGACACAAGCATAGTTCGCCGGCGGCGCCTGGCCTGCCGCTGGGCAAAAACCATCCCTGATGGCGAAGTCAATCACTAGCGGGACACCCTTTGGATATTTCTTGGAGAAGTTGTCGGAATAGAGGTCCGGCGAAGTGAAGTTGTACCAGTCCTTCTCCACCACCAT
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| CDS seq | ATGGTGGTGGAGAAGGACTGGTACAACTTCACTTCGCCGGACCTCTATTCCGACAACTTCTCCAAGAAATATCCAAAGGGTGTCCCGCTAGTGATTGACTTCGCCATCAGGGATGGTTTTTGCCCAGCGGCAGGCCAGGCGCCGCCGGCGAACTATGCTTGTGTCAGCAGCAACAGCTCATGCGTCAACGTGACCAACGGTGATGGTTACATCTGCAACTGTAGTAAGGGATATGATGGGAATCCTTACATACCTAACGGATGTCATGATATTGATGAATGTGCCCTCCGAGATAGCCATCCTGAGCTCCGAGTCCTGTATCCTTGTTCAAGAAATGGAATCTGCATGAACAGACCAGGCGGATATGATTGTCCATGCAAACGTGGAATGAGCGGTGATGGCAAAGCAGGAACTTGCTCAGAGAAATTTCCTTTACAGGCTAAGATTGTTGTAGTCAAACGTTTGATTTACGGCCAGACGTGCTTATATGGTCTTCAAAGAAAAAACTGTGTACTCGGCTGTACTCGCCAGCATATACCAGAGGATCCCCTCGACGAGGCTGCTGCCCAGGTTCCCGTCGTTGTGGATAGAACTGCAGCCTGA
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| Protein seq | MVVEKDWYNFTSPDLYSDNFSKKYPKGVPLVIDFAIRDGFCPAAGQAPPANYACVSSNSSCVNVTNGDGYICNCSKGYDGNPYIPNGCHDIDECALRDSHPELRVLYPCSRNGICMNRPGGYDCPCKRGMSGDGKAGTCSEKFPLQAKIVVVKRLIYGQTCLYGLQRKNCVLGCTRQHIPEDPLDEAAAQVPVVVDRTAA |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0174800 | OsNip_10t0174800-00 | Chr10 | 5201057 | 5203914 | - | RAP2018-11-26 | ||
| CDS seq | ATGGTGGTGGAGAAGGACTGGTACAACTTCACTTCGCCGGACCTCTATTCCGACAACTTCTCCAAGAAATATCCAAAGGGTGTCCCGCTAGTGATTGACTTCGCCATCAGGGATGGTTTTTGCCCAGCGGCAGGCCAGGCGCCGCCGGCGAACTATGCTTGTGTCAGCAGCAACAGCTCATGCGTCAACGTGACCAACGGTGATGGTTACATCTGCAACTGTAGTAAGGGATATGATGGGAATCCTTACATACCTAACGGATGTCATGATATTGATGAATGTGCCCTCCGAGATAGCCATCCTGAGCTCCGAGTCCTGTATCCTTGTTCAAGAAATGGAATCTGCATGAACAGACCAGGCGGATATGATTGTCCATGCAAACGTGGAATGAGCGGTGATGGCAAAGCAGGAACTTGCTCAGAGAAATTTCCTTTACAGGCTAAGATTGTTGTAGTCAAACGTTTGATTTACGGCCAGACGTGCTTATATGGTCTTCAAAGAAAAAACTGTGTACTCGGCTGTACTCGCCAGCATATACCAGAGGATCCCCTCGACGAGGCTGCTGCCCAGGTTCCCGTCGTTGTGGATAGAACTGCAGCCTGA
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| Protein seq | MVVEKDWYNFTSPDLYSDNFSKKYPKGVPLVIDFAIRDGFCPAAGQAPPANYACVSSNSSCVNVTNGDGYICNCSKGYDGNPYIPNGCHDIDECALRDSHPELRVLYPCSRNGICMNRPGGYDCPCKRGMSGDGKAGTCSEKFPLQAKIVVVKRLIYGQTCLYGLQRKNCVLGCTRQHIPEDPLDEAAAQVPVVVDRTAA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g09620 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0174800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0004320 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0004280 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0004190 | SBH | 0.0 | 2.878206 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0004560 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0004290 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0089200 | RBH | 0.0189705 | 2.2982465 | 0.068011 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0004450 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0099800 | RBH | 0 | 0 | 0.0156665 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0004300 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0004340 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0004440 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0004210 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0004530 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G004410 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0004450 | RBH | 0.0 | 0.0 | 0.0 |
