Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0000490 | OGI:10003260 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:820453-824585 | ||||||||
| Gene Symbol | WAK95, OsWAK95 | ||||||||||
| DNA seq | atggcatcatcatggctgctggctggcctgctgcttctgtcttccgccgccgagatcatcgtcttcggccggtcagccggctgccaggctaggtgcggcgacgtcgacatcccatacccgttcggcatcggcggcggctgcttccgcagcgagggcttcgagatcgcctgcaacacaagcaacggcgacgacggcgacttggtgcccaccctcgccgccgccaacgacaccatccgagtgcagaggctgctggtggacccgcggccggaggtgaaggtgatgctgcccgtggcataccagtgctacaactccgccggcaacgtcacccgggatttctacggcgacgtagagctcaacaagaacggcgtgtaccgcatctccgacgagcgcaacgtgttcatcgtcctgggatgcaacaccgtggcgtggacacagaacggggacagcggcggcagaggcatctacagtagcctctactacaccggctgcgtcacctactgcagcgactcggggagcgccatggacggcaagtgcgccggcatcggctgctgccacgtcgacatcccgccggagctcaccgacaacgtcgtcaccttccagcaatggccgcgcggtgaccaggtggacttcagcccctgcgactacgccttcctcgtcgacaagaacgagtaccgcttccggaggtccgatctcaagatggagctgaaccggaggatgccggtgtggctggactgggccatccgcgaccgcgacggcaacgcctcctccgcggcgtcatgcccttcgctggaggtgcagacgacgaagaatacggcggctgggtacgcctgcgtgagcgccaacagcgagtgtgtcaactccaccaacggccctggttactattgcaagtgcagcaatggttacgagggtaacccctacgacgacagtccggacagaggatgcaagggtaactatactaccttcatttttaatatataacgtagtcaaacttttttaaaacttagaatataaatatttattcggttactcggttaagtaaagtgaaaagattaggattactattgatctttcaactaaagtactctaagcgtactttgagcgtattttctccgtttgaataaatatttctgtaaaagacggagagtcaaacaaattaataaagataattacatcatatatcgaaaaaggtagcggtttatcttttaagtatagaagatccttatatatatatatatatatatatatatatatatatatatatatatatatatgcaatctctaaatgcctctagaccaaaattaactcttacattcgaataaatctgcagacatcgatgagtgtgcacgccccagggataagtatccttgctacggtgtctgcaggaacaccccaggagattatgagtgcagctgccacataggttaccagccaagtggtggtggtccaaagaaacaggagtgcagcccaaagtttccttttccagcacgacttgccgttggtatttgccttcgagatacttttttaaagtaaattgcattcgcatcacaaaattataacttatttcattgtataccttaacttgttcatgatatgctttcccttcacaacaccatcatacatcatcaaacaacaaatagaaatttcataaaaaatgatctaacttcatgaagtgtcatgaattccactcatgctttacaagatttcccacaaattcagtgacacaaacctagtgcaaaattaaatggtgtaagtgtagacatgcatggactaaacttagtgtaaagtgaaacaaggaaaactctacctagtgtaacatggaattcaccaaactactttctcttaagttattatttaatttgaaatgtttacaagagcctcaaaagattcaatgaaatgggtatatttaatatgaaagttaagtatatgggcgattcttatacttgtgcgtgggtgtgttatccaagtctctgacctcgcaaaatgtattttctttggtccctgaacttatcttaggtgtcatataggttcaaaggtgctccaacccattccatgtgccaacgtggcgtgcctcatggtggctacgtgttagtacgactaatatgttagtcacatatagaaaagataaaatttaaaaacatagtttcacctcttaggtagagaagagaaaagataaaattaaaaaaaatatttttaaaaaatttacagtagagaggagaaaatatgctttttaattttattttttctgtgtgactggcatgtgagtctcactaacccgtaggaggcattgtggtgtgcaacgtcagcgtgcattgcggattggagcccatttggatatatatgatacccaaaacaagttggggatctagaaaatgtatttaaaatattaggggcttagatgatacaccagtacaagttttaggtaccatctctgcacttcactctaaaatgaaaatagttatgaaacttggtagagaaaattgtttatgtggcctcaactcttcattaagttccctacatggggacaaagaaagggacatagaataaaggaaaaagagaaaatttaaaagagaggaagtagaaaaaaattcattagaaaattccaaggcgttgatgatctctgataaaactcttgagcaaacaggaaatcggaaattgaaatgttagaataaaactcggagcaagacttttatagtgtggcaaaattagaactccaaaaactaggacatggtaggggccaacgatttgaggtttttcgcatatgaggttctcatatccttggagaggtatatattatcccctatctagctacatatgttgtggcaaaatgatacgaataacaactcatgtgaaaataattgttgagctaacatgactgtcgtacatgcataatgttaacgtatacatccgtttatgataacattcatcaaagtgagcatttgcttctctttagattataaatggaaatctcaattcattcgttggctcacatgactttgtgatctttgtaggcatcactttaggattatccttcctgattgttgttgttcttttcacactaatgatcgttcaaaagagaaaaatgaacgaatatttcaagaagaatgggggctcagtactacagaaattggacaatatcatgattttctccaaagatgagcttaagaaaatcctgaaaaacaattcagatgttattggtgaaggaggatttggtaaggtatacaaagggaaacttaaagatgatacgttggtggctgtgaagacttcaattgaggtaaatgaagctcgaaaagaggatttcacaaacgaagttattatacagtcacaaatgatgcacaataacattatcaggcttttgggttgctgcttggaggtggatgttcccatgttagtgtacgagtttgctgctaatggcagtctaaaagacattctccatggtgatgccaatcgtcttgttcatctctcactagacctacgcctagatattgcagttgaatctgcagaaggtctgaggtacatgcactcgtccataagtcataccatacggcatggtgatattaagccagctaacatacttctaactgacaagtttattgccaagatctcagactttggaacatctaagcttcttaccgcagacaaagaattcaccatggttgtggcagggagcatggggtacatagacccagtcttctatatgactggtcacttaacacagaagagtgacgtgtatagttttggagttgtgttgctagagcttatcagcagaaagccaacaatatacgacaagaactacagcctcatcattgagttccaaaaggcatatgatcgagcgaatagtgggagggcattgtttgataaggatattgcaattgaagaagatgtcttgatcttagaagaaattggtaggttggcaatggattgttttaatgaaaagattgaggaacgaccggatatgaaggaggtagctgcacggcttatgatgctacggagatctagaaacgatagacaaaaaaattataatgcaagtcctcaacagtactttgaggagattagtatcgaggaaaattgtaagaactttggtgctgatatccgaacgaatagcagcagaacacttcttttgcattcagtttag
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| CDS seq | atggcatcatcatggctgctggctggcctgctgcttctgtcttccgccgccgagatcatcgtcttcggccggtcagccggctgccaggctaggtgcggcgacgtcgacatcccatacccgttcggcatcggcggcggctgcttccgcagcgagggcttcgagatcgcctgcaacacaagcaacggcgacgacggcgacttggtgcccaccctcgccgccgccaacgacaccatccgagtgcagaggctgctggtggacccgcggccggaggtgaaggtgatgctgcccgtggcataccagtgctacaactccgccggcaacgtcacccgggatttctacggcgacgtagagctcaacaagaacggcgtgtaccgcatctccgacgagcgcaacgtgttcatcgtcctgggatgcaacaccgtggcgtggacacagaacggggacagcggcggcagaggcatctacagtagcctctactacaccggctgcgtcacctactgcagcgactcggggagcgccatggacggcaagtgcgccggcatcggctgctgccacgtcgacatcccgccggagctcaccgacaacgtcgtcaccttccagcaatggccgcgcggtgaccaggtggacttcagcccctgcgactacgccttcctcgtcgacaagaacgagtaccgcttccggaggtccgatctcaagatggagctgaaccggaggatgccggtgtggctggactgggccatccgcgaccgcgacggcaacgcctcctccgcggcgtcatgcccttcgctggaggtgcagacgacgaagaatacggcggctgggtacgcctgcgtgagcgccaacagcgagtgtgtcaactccaccaacggccctggttactattgcaagtgcagcaatgacatcgatgagtgtgcacgccccagggataagtatccttgctacggtgtctgcaggaacaccccaggagattatgagtgcagctgccacataggttaccagccaagtggtggtggtccaaagaaacaggagtgcagcccaaagtttccttttccagcacgacttgccgttggcatcactttaggattatccttcctgattgttgttgttcttttcacactaatgatcgttcaaaagagaaaaatgaacgaatatttcaagaagaatgggggctcagtactacagaaattggacaatatcatgattttctccaaagatgagcttaagaaaatcctgaaaaacaattcagatgttattggtgaaggaggatttggtaaggtatacaaagggaaacttaaagatgatacgttggtggctgtgaagacttcaattgaggtaaatgaagctcgaaaagaggatttcacaaacgaagttattatacagtcacaaatgatgcacaataacattatcaggcttttgggttgctgcttggaggtggatgttcccatgttagtgtacgagtttgctgctaatggcagtctaaaagacattctccatggtgatgccaatcgtcttgttcatctctcactagacctacgcctagatattgcagttgaatctgcagaaggtctgaggtacatgcactcgtccataagtcataccatacggcatggtgatattaagccagctaacatacttctaactgacaagtttattgccaagatctcagactttggaacatctaagcttcttaccgcagacaaagaattcaccatggttgtggcagggagcatggggtacatagacccagtcttctatatgactggtcacttaacacagaagagtgacgtgtatagttttggagttgtgttgctagagcttatcagcagaaagccaacaatatacgacaagaactacagcctcatcattgagttccaaaaggcatatgatcgagcgaatagtgggagggcattgtttgataaggatattgcaattgaagaagatgtcttgatcttagaagaaattggtaggttggcaatggattgttttaatgaaaagattgaggaacgaccggatatgaaggaggtagctgcacggcttatgatgctacggagatctagaaacgatagacaaaaaaattataatgcaagtcctcaacagtactttgaggagattagtatcgaggaaaattgtaagaactttggtgctgatatccgaacgaatagcagcagaacacttcttttgcattcagtttag
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| Protein seq | MASSWLLAGLLLLSSAAEIIVFGRSAGCQARCGDVDIPYPFGIGGGCFRSEGFEIACNTSNGDDGDLVPTLAAANDTIRVQRLLVDPRPEVKVMLPVAYQCYNSAGNVTRDFYGDVELNKNGVYRISDERNVFIVLGCNTVAWTQNGDSGGRGIYSSLYYTGCVTYCSDSGSAMDGKCAGIGCCHVDIPPELTDNVVTFQQWPRGDQVDFSPCDYAFLVDKNEYRFRRSDLKMELNRRMPVWLDWAIRDRDGNASSAASCPSLEVQTTKNTAAGYACVSANSECVNSTNGPGYYCKCSNDIDECARPRDKYPCYGVCRNTPGDYECSCHIGYQPSGGGPKKQECSPKFPFPARLAVGITLGLSFLIVVVLFTLMIVQKRKMNEYFKKNGGSVLQKLDNIMIFSKDELKKILKNNSDVIGEGGFGKVYKGKLKDDTLVAVKTSIEVNEARKEDFTNEVIIQSQMMHNNIIRLLGCCLEVDVPMLVYEFAANGSLKDILHGDANRLVHLSLDLRLDIAVESAEGLRYMHSSISHTIRHGDIKPANILLTDKFIAKISDFGTSKLLTADKEFTMVVAGSMGYIDPVFYMTGHLTQKSDVYSFGVVLLELISRKPTIYDKNYSLIIEFQKAYDRANSGRALFDKDIAIEEDVLILEEIGRLAMDCFNEKIEERPDMKEVAARLMMLRRSRNDRQKNYNASPQQYFEEISIEENCKNFGADIRTNSSRTLLLHSV |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0000490 | OsLima_10g0000490.01 | Chr10 | 820453 | 824585 | + | NAM | ||
| CDS seq | atggcatcatcatggctgctggctggcctgctgcttctgtcttccgccgccgagatcatcgtcttcggccggtcagccggctgccaggctaggtgcggcgacgtcgacatcccatacccgttcggcatcggcggcggctgcttccgcagcgagggcttcgagatcgcctgcaacacaagcaacggcgacgacggcgacttggtgcccaccctcgccgccgccaacgacaccatccgagtgcagaggctgctggtggacccgcggccggaggtgaaggtgatgctgcccgtggcataccagtgctacaactccgccggcaacgtcacccgggatttctacggcgacgtagagctcaacaagaacggcgtgtaccgcatctccgacgagcgcaacgtgttcatcgtcctgggatgcaacaccgtggcgtggacacagaacggggacagcggcggcagaggcatctacagtagcctctactacaccggctgcgtcacctactgcagcgactcggggagcgccatggacggcaagtgcgccggcatcggctgctgccacgtcgacatcccgccggagctcaccgacaacgtcgtcaccttccagcaatggccgcgcggtgaccaggtggacttcagcccctgcgactacgccttcctcgtcgacaagaacgagtaccgcttccggaggtccgatctcaagatggagctgaaccggaggatgccggtgtggctggactgggccatccgcgaccgcgacggcaacgcctcctccgcggcgtcatgcccttcgctggaggtgcagacgacgaagaatacggcggctgggtacgcctgcgtgagcgccaacagcgagtgtgtcaactccaccaacggccctggttactattgcaagtgcagcaatgacatcgatgagtgtgcacgccccagggataagtatccttgctacggtgtctgcaggaacaccccaggagattatgagtgcagctgccacataggttaccagccaagtggtggtggtccaaagaaacaggagtgcagcccaaagtttccttttccagcacgacttgccgttggcatcactttaggattatccttcctgattgttgttgttcttttcacactaatgatcgttcaaaagagaaaaatgaacgaatatttcaagaagaatgggggctcagtactacagaaattggacaatatcatgattttctccaaagatgagcttaagaaaatcctgaaaaacaattcagatgttattggtgaaggaggatttggtaaggtatacaaagggaaacttaaagatgatacgttggtggctgtgaagacttcaattgaggtaaatgaagctcgaaaagaggatttcacaaacgaagttattatacagtcacaaatgatgcacaataacattatcaggcttttgggttgctgcttggaggtggatgttcccatgttagtgtacgagtttgctgctaatggcagtctaaaagacattctccatggtgatgccaatcgtcttgttcatctctcactagacctacgcctagatattgcagttgaatctgcagaaggtctgaggtacatgcactcgtccataagtcataccatacggcatggtgatattaagccagctaacatacttctaactgacaagtttattgccaagatctcagactttggaacatctaagcttcttaccgcagacaaagaattcaccatggttgtggcagggagcatggggtacatagacccagtcttctatatgactggtcacttaacacagaagagtgacgtgtatagttttggagttgtgttgctagagcttatcagcagaaagccaacaatatacgacaagaactacagcctcatcattgagttccaaaaggcatatgatcgagcgaatagtgggagggcattgtttgataaggatattgcaattgaagaagatgtcttgatcttagaagaaattggtaggttggcaatggattgttttaatgaaaagattgaggaacgaccggatatgaaggaggtagctgcacggcttatgatgctacggagatctagaaacgatagacaaaaaaattataatgcaagtcctcaacagtactttgaggagattagtatcgaggaaaattgtaagaactttggtgctgatatccgaacgaatagcagcagaacacttcttttgcattcagtttag
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| Protein seq | MASSWLLAGLLLLSSAAEIIVFGRSAGCQARCGDVDIPYPFGIGGGCFRSEGFEIACNTSNGDDGDLVPTLAAANDTIRVQRLLVDPRPEVKVMLPVAYQCYNSAGNVTRDFYGDVELNKNGVYRISDERNVFIVLGCNTVAWTQNGDSGGRGIYSSLYYTGCVTYCSDSGSAMDGKCAGIGCCHVDIPPELTDNVVTFQQWPRGDQVDFSPCDYAFLVDKNEYRFRRSDLKMELNRRMPVWLDWAIRDRDGNASSAASCPSLEVQTTKNTAAGYACVSANSECVNSTNGPGYYCKCSNDIDECARPRDKYPCYGVCRNTPGDYECSCHIGYQPSGGGPKKQECSPKFPFPARLAVGITLGLSFLIVVVLFTLMIVQKRKMNEYFKKNGGSVLQKLDNIMIFSKDELKKILKNNSDVIGEGGFGKVYKGKLKDDTLVAVKTSIEVNEARKEDFTNEVIIQSQMMHNNIIRLLGCCLEVDVPMLVYEFAANGSLKDILHGDANRLVHLSLDLRLDIAVESAEGLRYMHSSISHTIRHGDIKPANILLTDKFIAKISDFGTSKLLTADKEFTMVVAGSMGYIDPVFYMTGHLTQKSDVYSFGVVLLELISRKPTIYDKNYSLIIEFQKAYDRANSGRALFDKDIAIEEDVLILEEIGRLAMDCFNEKIEERPDMKEVAARLMMLRRSRNDRQKNYNASPQQYFEEISIEENCKNFGADIRTNSSRTLLLHSV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0103140 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02250 | RBH | 0.0 | 0.055220 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0103140 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000520 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000520 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000560 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000470 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0000450 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0013600 | RBH | 0.0057725 | 0.005425 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0000490 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0013500 | RBH | 0.007145 | 0.094459 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000510 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000540 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0000490 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0000490 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000480 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000480 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000470 | RBH | 0.0 | 0.0 | 0.0 |
