Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNip_10g0103140 | OGI:10001630 | 16/16 | Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | Chr10:241302-242237 | ||||||||
| Gene Symbol | WAK93, OsWAK93, OsRLCK286, RLCK286, WAK95, OsWAK95, WAK103, OsWAK103, WAK105, OsWAK105, YK3 | ||||||||||
| DNA seq | AGTCGTTATGCTACCTCCTTCATATCAGGTCGTTCTTCAACCTTTTCTTTCAAACACTCCATTGCCAGCCTGCCAATTTCTTCAAGGATGAGGATGTCTTCTTCAATTTCAATATCCTTGTCGAACATCATTCTCCCACTATTCTCTTTATCGTAGGACTTCTGGAACTCAATGATCAGGCTACAATTTTCACCATATATTGTTGGCTTTCTACTTATGAGTTCAAGTAGTACAACTCCAAAGCTATACACATCACTCTTCTGTGTTAAATGACCAGTCTTATGGAACACTGGGTCTATGTAGCCCATGCTTCCTACCACAAACATGGTAAAGTCTTTGTCTACAGTAAGAAGCTTGGAAGTTCCAAAGTCTGATATCTTAGGGATGAACTTATCCGTTAGAAGTATGTTGGCTGGTTTGACATCGCCATGTCGTATGGTACGATTAGTTGAGGAGTGCATGTATCTTAGACCTTCGGCAGATTCAATTGCAATGTCTAGGCGTAAGTGTAATGGTAGAGGGATATTTCCATCACCATGGAGAATATCTTGCAGATTGCCATTAGCCGCAAATTCATATACCAACATCGGAACATCCACCTCCAAGCAACAACCCAAAAGTTTGATAATGTTGTTGTGCATCATTTGCGACTGAATAATTACCTCATTTGTGAAATCATCCTTTCGTGCTTCATTTACCTCAATTGAGGTCTTCACAGCGACAATAGTATTATCTCCAAGAGTCCCCTTGTATACCTTACCAAAGCCTCCTTGACCAAGAACCTCTGAATTGTTCTTTGTGATCTTTTTTAGCTCATCTTTGGAAAAAATCTAGACATTGTCCACTTTCTGTAGTATTGAAACACCATTCTTTTTGAAATATTCATTCATTTTCTGCTTTTGAAACATCACAAGTGTAATAAGAAAAGCGACAATC
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| CDS seq | ATTTTTTCCAAAGATGAGCTAAAAAAGATCACAAAGAACAATTCAGAGGTTCTTGGTCAAGGAGGCTTTGGTAAGGTATACAAGGGGACTCTTGGAGATAATACTATTGTCGCTGTGAAGACCTCAATTGAGGTAAATGAAGCACGAAAGGATGATTTCACAAATGAGGTAATTATTCAGTCGCAAATGATGCACAACAACATTATCAAACTTTTGGGTTGTTGCTTGGAGGTGGATGTTCCGATGTTGGTATATGAATTTGCGGCTAATGGCAATCTGCAAGATATTCTCCATGGTGATGGAAATATCCCTCTACCATTACACTTACGCCTAGACATTGCAATTGAATCTGCCGAAGGTCTAAGATACATGCACTCCTCAACTAATCGTACCATACGACATGGCGATGTCAAACCAGCCAACATACTTCTAACGGATAAGTTCATCCCTAAGATATCAGACTTTGGAACTTCCAAGCTTCTTACTGTAGACAAAGACTTTACCATGTTTGTGGTAGGAAGCATGGGCTACATAGACCCAGTGTTCCATAAGACTGGTCATTTAACACAGAAGAGTGATGTGTATAGCTTTGGAGTTGTACTACTTGAACTCATAAGTAGAAAGCCAACAATATATGGTGAAAATTGTAGCCTGATCATTGAGTTCCAGAAGTCCTACGATAAAGAGAATAGTGGGAGAATGATGTTCGACAAGGATATTGAAATTGAAGAAGACATCCTCATCCTTGAAGAAATTGGCAGGCTGGCAATGGAGTGTTTGAAAGAAAAGGTTGAAGAACGACCTGATATGAAGGAGGTAGCATAA
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| Protein seq | IFSKDELKKITKNNSEVLGQGGFGKVYKGTLGDNTIVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAANGNLQDILHGDGNIPLPLHLRLDIAIESAEGLRYMHSSTNRTIRHGDVKPANILLTDKFIPKISDFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDVYSFGVVLLELISRKPTIYGENCSLIIEFQKSYDKENSGRMMFDKDIEIEEDILILEEIGRLAMECLKEKVEERPDMKEVA |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNip_10g0103140 | OsNip_10t0103140-00 | Chr10 | 241302 | 242237 | - | RAP2018-11-26 | ||
| CDS seq | ATTTTTTCCAAAGATGAGCTAAAAAAGATCACAAAGAACAATTCAGAGGTTCTTGGTCAAGGAGGCTTTGGTAAGGTATACAAGGGGACTCTTGGAGATAATACTATTGTCGCTGTGAAGACCTCAATTGAGGTAAATGAAGCACGAAAGGATGATTTCACAAATGAGGTAATTATTCAGTCGCAAATGATGCACAACAACATTATCAAACTTTTGGGTTGTTGCTTGGAGGTGGATGTTCCGATGTTGGTATATGAATTTGCGGCTAATGGCAATCTGCAAGATATTCTCCATGGTGATGGAAATATCCCTCTACCATTACACTTACGCCTAGACATTGCAATTGAATCTGCCGAAGGTCTAAGATACATGCACTCCTCAACTAATCGTACCATACGACATGGCGATGTCAAACCAGCCAACATACTTCTAACGGATAAGTTCATCCCTAAGATATCAGACTTTGGAACTTCCAAGCTTCTTACTGTAGACAAAGACTTTACCATGTTTGTGGTAGGAAGCATGGGCTACATAGACCCAGTGTTCCATAAGACTGGTCATTTAACACAGAAGAGTGATGTGTATAGCTTTGGAGTTGTACTACTTGAACTCATAAGTAGAAAGCCAACAATATATGGTGAAAATTGTAGCCTGATCATTGAGTTCCAGAAGTCCTACGATAAAGAGAATAGTGGGAGAATGATGTTCGACAAGGATATTGAAATTGAAGAAGACATCCTCATCCTTGAAGAAATTGGCAGGCTGGCAATGGAGTGTTTGAAAGAAAAGGTTGAAGAACGACCTGATATGAAGGAGGTAGCATAA
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| Protein seq | IFSKDELKKITKNNSEVLGQGGFGKVYKGTLGDNTIVAVKTSIEVNEARKDDFTNEVIIQSQMMHNNIIKLLGCCLEVDVPMLVYEFAANGNLQDILHGDGNIPLPLHLRLDIAIESAEGLRYMHSSTNRTIRHGDVKPANILLTDKFIPKISDFGTSKLLTVDKDFTMFVVGSMGYIDPVFHKTGHLTQKSDVYSFGVVLLELISRKPTIYGENCSLIIEFQKSYDKENSGRMMFDKDIEIEEDILILEEIGRLAMECLKEKVEERPDMKEVA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0248600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g06030 | SBH | 0.0 | 0.080615 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0103140 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000160 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000160 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0002680 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000180 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002610 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0006500 | RBH | 0 | 0.0070585 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0000160 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0005500 | RBH | 0.006177 | 0.0184895 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000150 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000160 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0000160 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002630 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000150 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000170 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000160 | RBH | 0.000000 | 0.000000 | 0.000000 |
