Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_09g0013700 | OGI:09052630 | 14/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr09:18689934-18695474 | ||||||||
| Gene Symbol | WAK82, OsWAK82, OsRLCK274, RLCK274, WAK85, OsWAK85, YK10 | ||||||||||
| DNA seq | cgacgctaacaccaagattgttgagtgtattccttgagcagccgccaacattactttgttgtcctacatacaatgcaagtaattttgccaacaatatgatattgcatatttactgtaataagatctgtgatatgattattttaagtagataatactgacattgcccaccgagattttgaaaaaaaaagtatagctactacctccctgaatctagctccatgacaccttttctctctatgctgaaatttcctgtactggtataccttgagctgaccatggacgattctccaagcaaactctccaactcttctgaattctgttctgcccatggatgttgcataacctttctcagcctgtcaagattatctgcaatgtgcttcattgatggcctattcacaccagacatctccaagcattgtgctgccaactctgcaatctcttcgagaaatggcatattctcactattcttgatctggtcatctaatatatctgcaagcttattattcttcattgcattgagaaacctcattgataggcttttctcatgttcaggtgcattgaggttgaacgctttctggcatgtgagaagctctacgagaacaactccgaagctatatacgtcactcttatctgttaattgacacaactgcatgtactctgggtcaagatatccacaagttccttgaaccagtgtgacaaactgtgactcatctgttggtgctagaatggaagcaccaaaatctgaaacctttgctatcaggtttctatcaaggaggatgttggatgatttgatgtcaccatgaaggattggtggtgaagcacatgaatggagataagtaagtgcctcagctgactcatgggcaatctgaagacgagtggccagggagatctggtgaccatggttaccatggatgagatcgaaaagcgtgccgttcgggatgaactcgtatactagcatagggacctctacttcaagacaacaacctaatagtttgacaatatttttgtggttgatttgagataaaattagcatttctttaccaaattctttcttctgatgctcattgattgtcatgcatcttttgacagctacttccatgttgcccttcagaagccccttgtaaacagttccatggcctccttgcccaagaatctgttgttcattgaacctatttgttgcttcctgtaattcttcatgtgagaagattttgaatgcaacaccttgttgcgatttcatctcttcaaataacagcagaccaccatgctgtcggaagtaatgttgtttgatgagctgtagctttcttctctctttgatcaagtaagcacacattatggtaatcaccaggacaacagatatgatacttgcgcctgcacgttgttggaaaatgatatggatgaaattccatcacctagccagcaattacatttttttttctatggaccaatactgagcagatttaaggctatccctgcaatgtcgcaatgaagaaaggtgctagagttgtgtcttgttggccaacgcgactacacaaaatttggccaaacaagttttttttaattattacttatttcagaaaagctctggtgttgtttagagggagaagtgttggattgtcatattgtatggtatgactacacactacgcagtatttaaactggtgatccatagacatggtagtagttcttacagaatataggagctcacctactaccacaggcactgagtcaaaacgtagtttcttctttggcatacaatctccattcatcatataacttcctggggagcatgagcaggtgaaattccccaacgtgttggtgcatatccccttgcaagggtaagtagcattgttgaggcactcatcaatatctgaaatcgaaccaccacaatgggtcagaattgtcacattacatacaagtgtacataagcagcagacacaaaattaaaggtgcaacacagtacctttgcaaccatcctttatgtacgggttgccttcatatccattggagcacttgcagcggtaaccttgtgcgttcgtcaggttgtcaatgcactgactgttgttactaatacatgcgtaggaagtcttgtttcttctagcttctgtacatgtttttgatgttatggcccagtcgtagacaaccggaactccccccttgtacgtgtcataaaatacgctggatgtgaggtaacttgtgctaaagttgaatgctgcggtttccatcactgccatgtagctgcaagggctgctcatccatattttagtggtgttgtagccttcgttgaaataaccctggtagtactgtatgctcttaggaacatttgcctggcagcagccagcgccagagcatgaaccattcttgggagttagtttgttcactttgttgtcgcatgctgacgaacacccgattacatactgcatttgttacatatggatgcagaaagctatttagttgaagatcaaaagcaacgaatattcaatgaaatttgtacaattctttacaccttgcgcttttaattccttagaccttgcccttttttacagttcttttttattcttgtaattgtaacttttacttctatattcaataaaattggcacatctttaccagttcgttaaaaaaaagcaacaaatattttttttcatgattaacaaattactctctctgttcctgttacatattctaagttgttttagttttatattcaaagtcaaaattttctaactttaaacataagagaagtgcaccacacctacaacatcaatttagtttttattaaatccataaaaaatatgtcttaatagtgtatttatttggtatatattataaatatatttttctataaacttatatcaaagtttgtaaattttatcccacccaacctaatagctaatagttgactgtagaagacaacatcaatggcaattgatgcaataaccgcacattattgaaatgcatgtgaaaaaccggatcgttcttaatttttacttctcctcttattataaatatttgacatttagctaagatgagatctgatcagaccttcgaaactttgattatcaataatttctcaaatgtttaattttactagaaaaaatacacgtgtgttgcaacgggtgaaggttattttaatcttattattattatacggtttagttaagataaaattcactatggaaattcgcgtgaatatatagctttttatgaaaccatgaactgcaattaagagtccaatcatctcaaaataacatacgagtttttttaaagagatttcttatacgactccttatgtattttcaaaagtaaacgaacttaaaaactgactcaaatatagatatatatttccaaaagcgaataaacttaaaaaccgactcatacacggatgacgtacaaaagtaccgacaaaaacatcttcaatttttataatagtagagaagagaaaaagaaataatatatgtagattttccttgaaaagttctaataatattaaatatggagtatcataaacttacatatgttataaatttatttaatatcatgcttcacgcacttaggtgtagtattcgactgcaactagggacacaactagcgtgtttgaatctcctgaagatgaagataaagattaagattaagtgtttaacgcaaaatcaggtggtaataacgtgtgattaattgagttttaattattacaaacttgaaaaatagattaatcttatatttttagaacaactttcatatagaaaattttcacacaaaacgcaccgtttagcaatttgaaaaacgtgccacgagtatccaaaagtttatccaacttttattagagaaaagaacataagcaaatgggataataatatctattcccaatcaatctatggacgcagggacggaccaacaaaacaccgtaatatttcaactctaatcttagaccaagatgacatgggcctgcttcgggagcttaagattctgagaagcagctggttggtagcaagctggcttctagttcattttatagattctacaactacagcttctcaaaatctggaccaaaagctagactgtttagggggagcttctgattctgggagaagctgcaacagctagaaactcccccaaacatgcccataagctggtccaggtcttatgagaaaccttggtccaccccttatggacatctataaatctctatctctactattataaaaattgaaaatatttttgttgacattttggtgcattgttcgtatttgagtcagtttttaagagcatcaccaacagattatctataatcttccctccaaaaattgtttttgggtttcctaaactgaaaataggaagtgaaaaaactcctccctctaacagataacctaaattaaatccctaaaacttaaaatggacccttctgttaaactactaacaaaaaattctattttttcttccatcgcagaaagatcactatctcccacacgcgggaacgggaggagagatgcgggagtgcaagattgagagcgacttttgtgagaacacgcatcagcatataaatggagcgaggaatcgggagaagagaactccaaaacttgggtaggtgagtaggggatctgttggagctatttttttgtttattaaaatccctccaaatcagttttgaaaatcagatagatagactgttggtgatgctctaagttcattcacttttaaaagtacataaagagtcgtataaaaatctttttaaaaaactcgcatattaacttgggacgagagttggacttctaattgctttagaattcttgctaaaccataaaaaatagcaacgtaggatatggccatcattccaataaaagttccaaattagatatcaatactatcaaaataaaaatcccatatattgtttaaaaaaatctaacaataatatgattaaaatagttttcacccgttgcaacacacgggtattttttttctagtttctaaaaaaagtaaaataaaaataagggtgactcatttttacacctttgtgaaaatcagatttactaaattatactgaaatagtacttacagaatcggtcgtcatgtaggcgagagtcttgcatccgatcacggtaattttgttatccgtgtccgataaccagaaagatgaaccactcaaattcgccgatgcgtcgctgtatgacataccgcccgtggattggttgtagcactgcctggacatgtacgccttcacccagaccttgccgtcttccatggagatcttgatcacctcgaagtccccccagaaaggcttctgattgctggtgcctttcgtggcgttgtcgcactcgagccgaaaaccctcgtgaatcgcgcagtgatcgccgatgccgaaggggaacgggatgtcgacgtccccgcacctcgtctggcagccggggcgtccggcagcagccgcggccaacccgatggcgcctgaaatgcagatgagaaggcaggcggagtggagaagcttggtcatttggttaattctctcttggtggttgtgtgtttctgaattctgagtacgtgtgatgctgc
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| CDS seq | atgaccaagcttctccactccgcctgccttctcatctgcatttcaggcgccatcgggttggccgcggctgctgccggacgccccggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcgatcactgcgcgattcacgagggttttcggctcgagtgcgacaacgccacgaaaggcaccagcaatcagaagcctttctggggggacttcgaggtgatcaagatctccatggaagacggcaaggtctgggtgaaggcgtacatgtccaggcagtgctacaaccaatccacgggcggtatgtcatacagcgacgcatcggcgaatttgagtggttcatctttctggttatcggacacggataacaaaattaccgtgatcggatgcaagactctcgcctacatgacgaccgattcttatgtaatcgggtgttcgtcagcatgcgacaacaaagtgaacaaactaactcccaagaatggttcatgctctggcgctggctgctgccaggcaaatgttcctaagagcatacagtactaccagggttatttcaacgaaggctacaacaccactaaaatatggatgagcagcccttgcagctacatggcagtgatggaaaccgcagcattcaactttagcacaagttacctcacatccagcgtattttatgacacgtacaaggggggagttccggttgtctacgactgggccataacatcaaaaacatgtacagaagctagaagaaacaagacttcctacgcatgtattagtaacaacagtcagtgcattgacaacctgacgaacgcacaaggttaccgctgcaagtgctccaatggatatgaaggcaacccgtacataaaggatggttgcaaagatattgatgagtgcctcaacaatgctacttacccttgcaaggggatatgcaccaacacgttggggaatttcacctgctcatgctccccaggaagttatatgatgaatggagattgtatgccaaagaagaaactacgttttgactcagtgcctgtggtagtaggcgcaagtatcatatctgttgtcctggtgattaccataatgtgtgcttacttgatcaaagagagaagaaagctacagctcatcaaacaacattacttccgacagcatggtggtctgctgttatttgaagagatgaaatcgcaacaaggtgttgcattcaaaatcttctcacatgaagaattacaggaagcaacaaataggttcaatgaacaacagattcttgggcaaggaggccatggaactgtttacaaggggcttctgaagggcaacatggaagtagctgtcaaaagatgcatgacaatcaatgagcatcagaagaaagaatttggtaaagaaatgctaattttatctcaaatcaaccacaaaaatattgtcaaactattaggttgttgtcttgaagtagaggtccctatgctagtatacgagttcatcccgaacggcacgcttttcgatctcatccatggtaaccatggtcaccagatctccctggccactcgtcttcagattgcccatgagtcagctgaggcacttacttatctccattcatgtgcttcaccaccaatccttcatggtgacatcaaatcatccaacatcctccttgatagaaacctgatagcaaaggtttcagattttggtgcttccattctagcaccaacagatgagtcacagtttgtcacactggttcaaggaacttgtggatatcttgacccagagtacatgcagttgtgtcaattaacagataagagtgacgtatatagcttcggagttgttctcgtagagcttctcacatgccagaaagcgttcaacctcaatgcacctgaacatgagaaaagcctatcaatgaggtttctcaatgcaatgaagaataataagcttgcagatatattagatgaccagatcaagaatagtgagaatatgccatttctcgaagagattgcagagttggcagcacaatgcttggagatgtctggtgtgaataggccatcaatgaagcacattgcagataatcttgacaggctgagaaaggttatgcaacatccatgggcagaacagaattcagaagagttggagagtttgcttggagaatcgtccatggtcagctcaaggtataccagtacaggaaatttcagcatagagagaaaaggtgtcatggagctagattcagggaggtag
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| Protein seq | MTKLLHSACLLICISGAIGLAAAAAGRPGCQTRCGDVDIPFPFGIGDHCAIHEGFRLECDNATKGTSNQKPFWGDFEVIKISMEDGKVWVKAYMSRQCYNQSTGGMSYSDASANLSGSSFWLSDTDNKITVIGCKTLAYMTTDSYVIGCSSACDNKVNKLTPKNGSCSGAGCCQANVPKSIQYYQGYFNEGYNTTKIWMSSPCSYMAVMETAAFNFSTSYLTSSVFYDTYKGGVPVVYDWAITSKTCTEARRNKTSYACISNNSQCIDNLTNAQGYRCKCSNGYEGNPYIKDGCKDIDECLNNATYPCKGICTNTLGNFTCSCSPGSYMMNGDCMPKKKLRFDSVPVVVGASIISVVLVITIMCAYLIKERRKLQLIKQHYFRQHGGLLLFEEMKSQQGVAFKIFSHEELQEATNRFNEQQILGQGGHGTVYKGLLKGNMEVAVKRCMTINEHQKKEFGKEMLILSQINHKNIVKLLGCCLEVEVPMLVYEFIPNGTLFDLIHGNHGHQISLATRLQIAHESAEALTYLHSCASPPILHGDIKSSNILLDRNLIAKVSDFGASILAPTDESQFVTLVQGTCGYLDPEYMQLCQLTDKSDVYSFGVVLVELLTCQKAFNLNAPEHEKSLSMRFLNAMKNNKLADILDDQIKNSENMPFLEEIAELAAQCLEMSGVNRPSMKHIADNLDRLRKVMQHPWAEQNSEELESLLGESSMVSSRYTSTGNFSIERKGVMELDSGR |
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| Function | Wall-associated receptor kinase 2 [UniProtKB/Swiss-Prot:Q9LMP1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_09g0013700 | OsLima_09g0013700.01 | Chr09 | 18689934 | 18695474 | - | NAM | ||
| CDS seq | atgaccaagcttctccactccgcctgccttctcatctgcatttcaggcgccatcgggttggccgcggctgctgccggacgccccggctgccagacgaggtgcggggacgtcgacatcccgttccccttcggcatcggcgatcactgcgcgattcacgagggttttcggctcgagtgcgacaacgccacgaaaggcaccagcaatcagaagcctttctggggggacttcgaggtgatcaagatctccatggaagacggcaaggtctgggtgaaggcgtacatgtccaggcagtgctacaaccaatccacgggcggtatgtcatacagcgacgcatcggcgaatttgagtggttcatctttctggttatcggacacggataacaaaattaccgtgatcggatgcaagactctcgcctacatgacgaccgattcttatgtaatcgggtgttcgtcagcatgcgacaacaaagtgaacaaactaactcccaagaatggttcatgctctggcgctggctgctgccaggcaaatgttcctaagagcatacagtactaccagggttatttcaacgaaggctacaacaccactaaaatatggatgagcagcccttgcagctacatggcagtgatggaaaccgcagcattcaactttagcacaagttacctcacatccagcgtattttatgacacgtacaaggggggagttccggttgtctacgactgggccataacatcaaaaacatgtacagaagctagaagaaacaagacttcctacgcatgtattagtaacaacagtcagtgcattgacaacctgacgaacgcacaaggttaccgctgcaagtgctccaatggatatgaaggcaacccgtacataaaggatggttgcaaagatattgatgagtgcctcaacaatgctacttacccttgcaaggggatatgcaccaacacgttggggaatttcacctgctcatgctccccaggaagttatatgatgaatggagattgtatgccaaagaagaaactacgttttgactcagtgcctgtggtagtaggcgcaagtatcatatctgttgtcctggtgattaccataatgtgtgcttacttgatcaaagagagaagaaagctacagctcatcaaacaacattacttccgacagcatggtggtctgctgttatttgaagagatgaaatcgcaacaaggtgttgcattcaaaatcttctcacatgaagaattacaggaagcaacaaataggttcaatgaacaacagattcttgggcaaggaggccatggaactgtttacaaggggcttctgaagggcaacatggaagtagctgtcaaaagatgcatgacaatcaatgagcatcagaagaaagaatttggtaaagaaatgctaattttatctcaaatcaaccacaaaaatattgtcaaactattaggttgttgtcttgaagtagaggtccctatgctagtatacgagttcatcccgaacggcacgcttttcgatctcatccatggtaaccatggtcaccagatctccctggccactcgtcttcagattgcccatgagtcagctgaggcacttacttatctccattcatgtgcttcaccaccaatccttcatggtgacatcaaatcatccaacatcctccttgatagaaacctgatagcaaaggtttcagattttggtgcttccattctagcaccaacagatgagtcacagtttgtcacactggttcaaggaacttgtggatatcttgacccagagtacatgcagttgtgtcaattaacagataagagtgacgtatatagcttcggagttgttctcgtagagcttctcacatgccagaaagcgttcaacctcaatgcacctgaacatgagaaaagcctatcaatgaggtttctcaatgcaatgaagaataataagcttgcagatatattagatgaccagatcaagaatagtgagaatatgccatttctcgaagagattgcagagttggcagcacaatgcttggagatgtctggtgtgaataggccatcaatgaagcacattgcagataatcttgacaggctgagaaaggttatgcaacatccatgggcagaacagaattcagaagagttggagagtttgcttggagaatcgtccatggtcagctcaaggtataccagtacaggaaatttcagcatagagagaaaaggtgtcatggagctagattcagggaggtag
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| Protein seq | MTKLLHSACLLICISGAIGLAAAAAGRPGCQTRCGDVDIPFPFGIGDHCAIHEGFRLECDNATKGTSNQKPFWGDFEVIKISMEDGKVWVKAYMSRQCYNQSTGGMSYSDASANLSGSSFWLSDTDNKITVIGCKTLAYMTTDSYVIGCSSACDNKVNKLTPKNGSCSGAGCCQANVPKSIQYYQGYFNEGYNTTKIWMSSPCSYMAVMETAAFNFSTSYLTSSVFYDTYKGGVPVVYDWAITSKTCTEARRNKTSYACISNNSQCIDNLTNAQGYRCKCSNGYEGNPYIKDGCKDIDECLNNATYPCKGICTNTLGNFTCSCSPGSYMMNGDCMPKKKLRFDSVPVVVGASIISVVLVITIMCAYLIKERRKLQLIKQHYFRQHGGLLLFEEMKSQQGVAFKIFSHEELQEATNRFNEQQILGQGGHGTVYKGLLKGNMEVAVKRCMTINEHQKKEFGKEMLILSQINHKNIVKLLGCCLEVEVPMLVYEFIPNGTLFDLIHGNHGHQISLATRLQIAHESAEALTYLHSCASPPILHGDIKSSNILLDRNLIAKVSDFGASILAPTDESQFVTLVQGTCGYLDPEYMQLCQLTDKSDVYSFGVVLVELLTCQKAFNLNAPEHEKSLSMRFLNAMKNNKLADILDDQIKNSENMPFLEEIAELAAQCLEMSGVNRPSMKHIADNLDRLRKVMQHPWAEQNSEELESLLGESSMVSSRYTSTGNFSIERKGVMELDSGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.167251 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0471800 | RBH | 0.497643 | 0.098424 | 3.332339 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g29600 | RBH | 0.333541 | 0.065610 | 0.850184 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0471800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013660 | RBH | 0.000000 | 4.255207 | 0.511444 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013610 | RBH | 0.176626 | 0.440920 | 1.761555 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0013870 | RBH | 0.398294 | 2.801260 | 3.188827 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013690 | RBH | 0.000000 | 0.119165 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0013810 | RBH | 0.251369 | 0.0 | 10.763715 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0301200 | SBH | 0.2532495 | 1.187333 | 0.223327 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013710 | RBH | 0.078057 | 0.096996 | 0.049796 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0290800 | RBH | 0.4039655 | 1.277264 | 1.4154025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020210 | SBH | 0.034985 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0013510 | RBH | 0.147394 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0013600 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013470 | RBH | 0.000000 | 0.0 | 0.093014 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013530 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013990 | RBH | 0.126694 | 0.0 | 0.570636 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013770 | RBH | 0.000000 | 1.597190 | 1.534230 |
