Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_09g0008200 | OGI:09036970 | 8/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr09:13035012-13038034 | ||||||||
| Gene Symbol | WAK79, OsWAK79 | ||||||||||
| DNA seq | ttagcaccctgatttgagacgcttcatagcgttcttctcaatgctgaaactttttgtgctctcaacagttgagttgatcacataagatgaatccccaagaaagctctccatctcttctgggttctgtcttgcgcattggtgttccatgaccttccttagcctaccaagttcgtctccaatttccttcattgatggcctatttatggaagacatgtctaagcattttcttgctaactctgccatttcttccagaaactccatattctcattattcttaatttgatcatccaacatatcctcgagcttgttctccttcatcgcagagagaaacatcatcgacaagactttctcatgttctggtgcatcaaggttgaatgccttcttgcgtgtgagaagttcgagaagaacaactccgaagctatacacatcactcttatctgttaattggcatgtttgcatgtactctgggtcaagatacccacaagttctttggactagcgtaacaaactgcatctcattcgttggagccaagatagaagcaccgaagtctgagactttcgctgagaagttGttgtcaaggaggatgttggatgacttgacatcaccatctaggattggtggtgaagcacaagagtggaggtaggcaagcgcctcagcagactcatgggcaatccgaaggcgagtgattagagagatgtgattaccatggttttcatggatgagatggaagagtgtaccgttcgggatgaactcgtacacaagcatggggacctccacttcgaggcaacaacctaatagtttaacaatgtttttgtggttgatctgggataggattaccatttctttaccaaactctttcttcttttgctcgtcaattgtcatgcattttttgacagctacttccgagttgctcttgagaagccccttgtaaacaattccattgcctccttggcctagaatttcttgttcattaaatttgtttgtcgcttgttgcaattcttcttcggagaagattttgaatgcatgaccttattgagatttcatctcttcaaatagtatccgaccaccatgctgttgaaaataattgttttttatatgttgtagttttcttctctgttggacatagcatgcaaaagttatggcaatcactacgatgacgaacccaacacttgcacctgcacaattcaaaagtaaactagagttatgaTttttttttttgaaatgtacagaaaggctgtgtttagttcccttcaaacttccaactttttcgtcaaatcaaatgtttggacacatgcatgaagcattaaatatggaaaaaaaaaccaattacatagtttgcatgtaaattgcgagacaaatctttcgagcctaattactccatgatttgacaatatggtgctacagtaaatatttgctaatgacggattaattaggcttaatagattcgtctcgcagtttacaggtgaaatatgtaattgttttgttattagtctacgtttaatactttaaatatggacttgtttggttctttaccctaccaattcattggtagtgccaaagtctaggcaaactttggcactaccaaaatattggtagggtaaaattatttagcaatcatttggattgttaccaatataaagccAaattctcattgtataaggaagaaatttctagaatatgaccaaataggattggggcactatcaaatatttggctcaatccaaactaacacatatactattcaatttgtttataaattggtagggcatattttttggtatcaaaccaaaacaaccctatgtgtccgtatagtcaaaatatttttgccaaaacaactaaacacgaccaagatccatggcaaacacgaccaagatccatgcatggcctaatgattatttggtccttgtttaggttatgcgatcttggcttggatcttgtttgttttaggctatttaaacaagttctttttgaatAaaatggtagaaaactgtgtgtacaatactagataaatctgctagcaataatatctcatgggtaaccatgaagtttcgtgatacgaagtcacatagactttattttactccatctaatatcaaatattggtcgttttatactgctacgcaagtttaagatcgtacattaaaacgcacttgtccgcattcattaatacaataaaaatgatcaatcattcattcatgagagggatattatttattcaagtaactatgaatctaattctactccctccagtcagaaagaatgtgtttaattatttattatttaaagtgtaggtttcaggtatatacgtgaaaatgatatagccaaaagtttatcataacaaaagctttcgtgtacctttttttaagaaggtagcgtattctctattacaaattttgtaccttttaatatctcagttaacaagagataatatatcaaattttacgctAaaaattatagtacctcttcgtatgttctttaaacaaaagaaaattctcaattcgtaatgatgagctcttgtatttgaaatcaaggattgagtgagtaatgtgggcgcaatctttaattactactttcaggttgatgcccacacatgtaattatctttttgtacggaagaaaggagcctatacctattacatgcctagcaggaaaagtggacttttgattaggcaggcagaatccattcttcatataacttcctgggtagcatgagcaatcgaaactccctatcgtattcttgcatattcccatgcatgggtaagtagcgttgtcaaggcactcattgatatctgaaataaaaccaccacgcttggttaacattaatatttctgctatcttatatgaatgtattaatAtatagcgcatagctgtacctttgcatccatctttaatgtatgggttgccttcgtatccatgggagcacttgcaacggtaacctccctttatatcatcgacacagttactgtttccactaatacacgcatatgaagtggtgttttttatagcaatatcacatacatccat
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| CDS seq | atggatgtatgtgatattgctataaaaaacaccacttcatatgcgtgtattagtggaaacagtaactgtgtcgatgatataaagggaggttaccgttgcaagtgctcccatggatacgaaggcaacccatacattaaagatggatgcaaagatatcaatgagtgccttgacaacgctacttacccatgcatgggaatatgcaagaatacgatagggagtttcgattgctcatgctacccaggaagttatatgaagaatggattctgcctgcctaatcaaaagtccacttttcctgctaggcatgtaataggtcatgcattcaaaatcttctccgaagaagaattgcaacaagcgacaaacaaatttaatgaacaagaaattctaggccaaggaggcaatggaattgtttacaaggggcttctcaagagcaactcggaagtagctgtcaaaaaatgcatgacaattgacgagcaaaagaagaaagagtttggtaaagaaatggtaatcctatcccagatcaaccacaaaaacattgttaaactattaggttgttgcctcgaagtggaggtccccatgcttgtgtacgagttcatcccgaacggtacactcttccatctcatccatgaaaaccatggtaatcacatctctctaatcactcgccttcggattgcccatgagtctgctgaggcgcttgcctacctccactcttgtgcttcaccaccaatcctagatggtgatgtcaagtcatccaacatcctccttgacaaCaacttctcagcgaaagtctcagacttcggtgcttctatcttggctccaacgaatgagatgcagtttgttacgctagtccaaagaacttgtgggtatcttgacccagagtacatgcaaacatgccaattaacagataagagtgatgtgtatagcttcggagttgttcttctcgaacttctcacacgcaagaaggcattcaaccttgatgcaccagaacatgagaaagtcttgtcgatgatgtttctctctgcgatgaaggagaacaagctcgaggatatgttggatgatcaaattaagaataatgagaatatggagtttctggaagaaatggcagagttagcaagaaaatgcttagacatgtcttccataaataggccatcaatgaaggaaattggagacgaacttggtaggctaaggaaggtcatggaacaccaatgcgcaagacagaacccagaagagatggagagctttcttggggattcatcttatgtgatcaactcaactgttgagagcacaaaaagtttcagcattgagaagaacgctatgaagcgtctcaaatcagggtgctaa
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| Protein seq | MDVCDIAIKNTTSYACISGNSNCVDDIKGGYRCKCSHGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFDCSCYPGSYMKNGFCLPNQKSTFPARHVIGHAFKIFSEEELQQATNKFNEQEILGQGGNGIVYKGLLKSNSEVAVKKCMTIDEQKKKEFGKEMVILSQINHKNIVKLLGCCLEVEVPMLVYEFIPNGTLFHLIHENHGNHISLITRLRIAHESAEALAYLHSCASPPILDGDVKSSNILLDNNFSAKVSDFGASILAPTNEMQFVTLVQRTCGYLDPEYMQTCQLTDKSDVYSFGVVLLELLTRKKAFNLDAPEHEKVLSMMFLSAMKENKLEDMLDDQIKNNENMEFLEEMAELARKCLDMSSINRPSMKEIGDELGRLRKVMEHQCARQNPEEMESFLGDSSYVINSTVESTKSFSIEKNAMKRLKSGC |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_09g0008200 | OsLima_09g0008200.01 | Chr09 | 13035012 | 13038034 | - | NAM | ||
| CDS seq | atggatgtatgtgatattgctataaaaaacaccacttcatatgcgtgtattagtggaaacagtaactgtgtcgatgatataaagggaggttaccgttgcaagtgctcccatggatacgaaggcaacccatacattaaagatggatgcaaagatatcaatgagtgccttgacaacgctacttacccatgcatgggaatatgcaagaatacgatagggagtttcgattgctcatgctacccaggaagttatatgaagaatggattctgcctgcctaatcaaaagtccacttttcctgctaggcatgtaataggtcatgcattcaaaatcttctccgaagaagaattgcaacaagcgacaaacaaatttaatgaacaagaaattctaggccaaggaggcaatggaattgtttacaaggggcttctcaagagcaactcggaagtagctgtcaaaaaatgcatgacaattgacgagcaaaagaagaaagagtttggtaaagaaatggtaatcctatcccagatcaaccacaaaaacattgttaaactattaggttgttgcctcgaagtggaggtccccatgcttgtgtacgagttcatcccgaacggtacactcttccatctcatccatgaaaaccatggtaatcacatctctctaatcactcgccttcggattgcccatgagtctgctgaggcgcttgcctacctccactcttgtgcttcaccaccaatcctagatggtgatgtcaagtcatccaacatcctccttgacaaCaacttctcagcgaaagtctcagacttcggtgcttctatcttggctccaacgaatgagatgcagtttgttacgctagtccaaagaacttgtgggtatcttgacccagagtacatgcaaacatgccaattaacagataagagtgatgtgtatagcttcggagttgttcttctcgaacttctcacacgcaagaaggcattcaaccttgatgcaccagaacatgagaaagtcttgtcgatgatgtttctctctgcgatgaaggagaacaagctcgaggatatgttggatgatcaaattaagaataatgagaatatggagtttctggaagaaatggcagagttagcaagaaaatgcttagacatgtcttccataaataggccatcaatgaaggaaattggagacgaacttggtaggctaaggaaggtcatggaacaccaatgcgcaagacagaacccagaagagatggagagctttcttggggattcatcttatgtgatcaactcaactgttgagagcacaaaaagtttcagcattgagaagaacgctatgaagcgtctcaaatcagggtgctaa
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| Protein seq | MDVCDIAIKNTTSYACISGNSNCVDDIKGGYRCKCSHGYEGNPYIKDGCKDINECLDNATYPCMGICKNTIGSFDCSCYPGSYMKNGFCLPNQKSTFPARHVIGHAFKIFSEEELQQATNKFNEQEILGQGGNGIVYKGLLKSNSEVAVKKCMTIDEQKKKEFGKEMVILSQINHKNIVKLLGCCLEVEVPMLVYEFIPNGTLFHLIHENHGNHISLITRLRIAHESAEALAYLHSCASPPILDGDVKSSNILLDNNFSAKVSDFGASILAPTNEMQFVTLVQRTCGYLDPEYMQTCQLTDKSDVYSFGVVLLELLTRKKAFNLDAPEHEKVLSMMFLSAMKENKLEDMLDDQIKNNENMEFLEEMAELARKCLDMSSINRPSMKEIGDELGRLRKVMEHQCARQNPEEMESFLGDSSYVINSTVESTKSFSIEKNAMKRLKSGC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0373800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g20740 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0373800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013650 | SBH | 0.0 | 6.404607 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013600 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0013860 | SBH | 0.0 | 0.494785 | 0.090946 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013660 | SBH | 0.000000 | 0.059288 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0008290 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0301200 | SBH | 0.2532495 | 1.187333 | 0.223327 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013660 | SBH | 0.0 | 0.179175 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0194900 | SBH | 4.9785885 | 0.172745 | 0.2012335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0015640 | SBH | 0.0 | 0.059551 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0008020 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0007920 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013420 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0013480 | SBH | 0.0 | 0.619602 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013960 | SBH | 0.159791 | 1.844438 | 0.178197 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013740 | SBH | 0.086221 | 1.981473 | 0.393440 |
