Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_09g0013480 | OGI:09052540 | 12/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr09:18911780-18915883 | ||||||||
| Gene Symbol | WAK80, OsWAK80 | ||||||||||
| DNA seq | ttaacggcctgattctagacactgaagttcactattgatgctgaaatttcctgtattctcaaccgttgagttgttgatctcgtaagaagagtccccaagtaagctctccatctcttcaggattttgttgtgcccatggatgttgcattaccttcctcaacctatcgagcttgtctgcaacttccttcatcaacggtctattctcaccagacatttccaagcattgctttgctaactctgcaatctcttcaagaaactccaaattatctcccgtcatgattagatcatctaaaatatcagaaagtcttttttccttcatggctgatagaaacctcatggctaggctcctctcatcttcagggctttcaaggttgaatgctttctttcttgtgagcaattctagaataacaactccaaagctatatacatcacttttatctgttaactggcatgtttgcatgtactctggatcgaggtatccacaagttccttgaacgagagtgacgaactgcgactcatcagttggtgctaggatggaagcaccgaagtcagaaacttttgctacataatctttgtctaagaggatatttgaggacttgacatcgccatggaggatcggtggtgatgcccatgagtgtaaataggcaagagcctctgcagattcatgtgcaatgcgtaagcgagtatccaaggagatgtgttgattgtggttcccgtggatgagagagaacaatgtgccatttggaatgaactcatagacaagcatcggaacttctacttcgaggcagcaacccaataatttgacaacgttcctatggttgatttgggacaagattagcatttccttgccgaattctttcttttgtttcatatcaattgtgatgcatcttttgacggctatttccatgtttcccttgagaagtcccttgtaaacagttgcattgcctccttggccaaggacttgttgtttgtcaaacttgtttgttgcttgttgcaattcttcttctgagaagaTtttgaatgaaatgccttgttgagattttatctcttcgaatagcaacataccaccatgttggcggaagtaccgccttttgacatactgtagcattctcttctctctgatgaagcatgcataagttactataatcactagtaatacggccccaacacttgctcctgcatatATAatagaaaactttagaattgctatgaaaagattattggaatgtgtagttgatccctttatgctagccccagggaagtcccacatatgccacatcggcattggtagaggaagattcactaaattattttttttctttagcaacttgaggagttcgtgaggatttcatcattagttggaacatgaaatgttcatgatcaaaaaatgtgtccattcttcttactatagaaaaatacacaccatgcatgcatgattcatcagtggttgctggtcttgctatggtgtacaaattaATtttaggaatatctagaaaagagatatagttgcaagaatgaatgtatactaaatgctaaagtaaaagggtagataaatgagggctagcttcagaatgaaaaatacattaattatgcatacacaccttattgtttaaacttgaaagccagaacgaataccatttttaaacatataACTatatatatagtagaggcattgtaaattaggattatatttttctatatctgcatgaggaaaacgatagagctactatatagtaaataactaaatatagcacaaatgtataagcaaaaacataaatgtatatcgatctcacatgccattttaattcttataggaagagacgaactcacctattacaagatttttaggaaaaccagacttctgatttggaatgcaaattccattcatcatatagtttccagggtagcatgagcaggtgaaattccccaacgtattcttacatattcccggacaagggtaagtagcattgTtgaggcactcattaatatctgaagccaaaccatcaacacacttggttaaaattgttgcattatcttatacatttgtaacaaagataggcagcaggcataagaaggtgtgtatgactatacctttgcatccatccttaacgtatggattgccttcatatccatcAGagcacttgcagcggtaacctccctttggatcatCAAcacaacgactttttccactaatgcatgcatatgaagtagtgtttcttttgactcgatcacatgaatccattgttatgatccaatctagggaaaccttagctaaCccattgtatgtgtcatagaatgtagtggagttgaaataatttttgttgaagttgaaggTtgtggtttccatcactgttatgaagctgcaaggactgctgttattatttcttttactgaaataagtactatagtaccatgtgccattggggaaatcaagtttgcagcaacccgcttcaccggaacatataccgtccttggggtcgtttccgcatgagggcacacaacctgttaaaacctgcacatgttacgtaTtatatatacaccttaatacaagatttgacaatgatccaaataattCcccccccccccccacacacatcctatttgggaattgacacgattttcaagcacactctttaattttgagaaaggccgtgtttagattcatttttttttgccaaaaacatcgcatcgaatgtttggacacatgttagagcattaaatgtggaacaaaaaaaccaattgtatagtttgtatgtaaattgcgagatgaatcatttgagcctaattacaccattatttgacaatgtgatgctacaataaacatttgctaatgacgaattaattagtcataataaattcgtctcgcagtttacaggcggaatgtataatttattttgctattagtttatgtttaatactttaaatgtgtgttgtatacttaaaaaaaaattggccaaggaactaaacacacccagagtatgtttgtattcacaatttcatatactgcatcaaaagtatcaaaaggctctgaattgtaggtaggcacatgtatttccattgaacgaatatgctcatatgtactccttactcctaatgtcgatggacactaatatgaaatgtaggatttaaacattgataggcttacaatcacaccacccagccatttggccacatgccaacttccaaccactacaaaattatatatacttatgctctgaatttctcatatatacacactacctccaattcacaagtaagtgttgttttggatacctacacaatcaccaatacatcactttgattattaattactaatattaaaatgtacacaaaatatagcacatttataatattttgaaagtacttttaaaggaaaatattgtcatatcgttttcaaaagtcaacttgaaatagcagcggtcaaattttccacacgcattccacatgcatgtgaaagggagaaactaataatattctcacatgacaaatcctaagtcgtccttgatatataaaggaataataatttagactatcatgtattttaaaggccatatattatgaacacatttgagtatttgtgatctaatgcaaccagattgacgaattatgggcatatacttacattattgatctgcatatacgaaaacgtttcgcacccgatgacgatgatcttgttatccctgtccgatatccagaaaggcgagcggctgaagctcacagatgttgtgttggtgttgtcctccctggtgcccgtcgactggttgtagcagttcttggatatgttcatcttcatccaggccttgccgtcttccatggagatcttggtcacctccatacccctgaagaaaggcttgctggtgccgtcaacgggcttgcagtcgaacttgaacgggtagtttgtgtaaggcgcctcgagcccgcagtgctcgccgatgccgaacgggaacgggatgtccacggcgccgcacttggtcgggcagcccggcttcgagacggccgccaccggcgccggcacgttgccggctgcggccggcggcgccgagacggcaaggcagagcagcagcagcgacgagtactgcagaagaagcggcgggcggctggccat
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| CDS seq | atggccagccgcccgccgcttcttctgcagtactcgtcgctgctgctgctctgccttgccgtctcggcgccgccggccgcagccggcaacgtgccggcgccggtggcggccgtctcgaagccgggctgcccgaccaagtgcggcgccgtggacatcccgttcccgttcggcatcggcgagcactgcgggctcgaggcgccttacacaaactacccgttcaagttcgactgcaagcccgttgacggcaccagcaagcctttcttcaggggtatggaggtgaccaagatctccatggaagacggcaaggcctggatgaagatgaacatatccaagaactgctacaaccagtcgacgggcaccagggaggacaacaccaacacaacatctgtgagcttcagccgctcgcctttctggatatcggacagggataacaagatcatcgtcatcgggtgcgaaacgttttcgtatatgcagatcaataatgttttaacaggttgtgtgccctcatgcggaaacgaccccaaggacggtatatgttccggtgaagcgggttgctgcaaacttgatttccccaatggcacatggtactatagtacttatttcagtaaaagaaataataacagcagtccttgcagcttcataacagtgatggaaaccacaAccttcaacttcaacaaaaattatttcaactccactacattctatgacacatacaatggGttagctaaggtttccctagattggatcataacaatggattcatgtgatcgagtcaaaagaaacactacttcatatgcatgcattagtggaaaaagtcgttgtgTTGatgatccaaagggaggttaccgctgcaagtgctCTgatggatatgaaggcaatccatacgttaaggatggatgcaaagatattaatgagtgcctcaAcaatgctacttacccttgtccgggaatatgtaagaatacgttggggaatttcacctgctcatgctaccctggaaactatatgatgaatggaatttgcattccaaatcagaagtctggttttcctaaaaatcttgtaataggagcaagtgttggggccgtattactagtgattatagtaacttatgcatgcttcatcagagagaagagaatgctacagtatgtcaaaaggcggtacttccgccaacatggtggtatgttgctattcgaagagataaaatctcaacaaggcatttcattcaaaAtcttctcagaagaagaattgcaacaagcaacaaacaagtttgacaaacaacaagtccttggccaaggaggcaatgcaactgtttacaagggacttctcaagggaaacatggaaatagccgtcaaaagatgcatcacaattgatatgaaacaaaagaaagaattcggcaaggaaatgctaatcttgtcccaaatcaaccataggaacgttgtcaaattattgggttgctgcctcgaagtagaagttccgatgcttgtctatgagttcattccaaatggcacattgttctctctcatccacgggaaccacaatcaacacatctccttggatactcgcttacgcattgcacatgaatctgcagaggctcttgcctatttacactcatgggcatcaccaccgatcctccatggcgatgtcaagtcctcaaatatcctcttagacaaagattatgtagcaaaagtttctgacttcggtgcttccatcctagcaccaactgatgagtcgcagttcgtcactctcgttcaaggaacttgtggatacctcgatccagagtacatgcaaacatgccagttaacagataaaagtgatgtatatagctttggagttgttattctagaattgctcacaagaaagaaagcattcaaccttgaaagccctgaagatgagaggagcctagccatgaggtttctatcagccatgaaggaaaaaagactttctgatattttagatgatctaatcatgacgggagataatttggagtttcttgaagagattgcagagttagcaaagcaatgcttggaaatgtctggtgagaatagaccgttgatgaaggaagttgcagacaagctcgataggttgaggaaggtaatgcaacatccatgggcacaacaaaatcctgaagagatggagagcttacttggggactcttcttacgagatcaacaactcaacggttgagaatacaggaaatttcagcatcaatagtgaacttcagtgtctagaatcaggccgttaa
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| Protein seq | MASRPPLLLQYSSLLLLCLAVSAPPAAAGNVPAPVAAVSKPGCPTKCGAVDIPFPFGIGEHCGLEAPYTNYPFKFDCKPVDGTSKPFFRGMEVTKISMEDGKAWMKMNISKNCYNQSTGTREDNTNTTSVSFSRSPFWISDRDNKIIVIGCETFSYMQINNVLTGCVPSCGNDPKDGICSGEAGCCKLDFPNGTWYYSTYFSKRNNNSSPCSFITVMETTTFNFNKNYFNSTTFYDTYNGLAKVSLDWIITMDSCDRVKRNTTSYACISGKSRCVDDPKGGYRCKCSDGYEGNPYVKDGCKDINECLNNATYPCPGICKNTLGNFTCSCYPGNYMMNGICIPNQKSGFPKNLVIGASVGAVLLVIIVTYACFIREKRMLQYVKRRYFRQHGGMLLFEEIKSQQGISFKIFSEEELQQATNKFDKQQVLGQGGNATVYKGLLKGNMEIAVKRCITIDMKQKKEFGKEMLILSQINHRNVVKLLGCCLEVEVPMLVYEFIPNGTLFSLIHGNHNQHISLDTRLRIAHESAEALAYLHSWASPPILHGDVKSSNILLDKDYVAKVSDFGASILAPTDESQFVTLVQGTCGYLDPEYMQTCQLTDKSDVYSFGVVILELLTRKKAFNLESPEDERSLAMRFLSAMKEKRLSDILDDLIMTGDNLEFLEEIAELAKQCLEMSGENRPLMKEVADKLDRLRKVMQHPWAQQNPEEMESLLGDSSYEINNSTVENTGNFSINSELQCLESGR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_09g0013480 | OsLaMu_09g0013480.01 | Chr09 | 18911780 | 18915883 | - | NAM | ||
| CDS seq | atggccagccgcccgccgcttcttctgcagtactcgtcgctgctgctgctctgccttgccgtctcggcgccgccggccgcagccggcaacgtgccggcgccggtggcggccgtctcgaagccgggctgcccgaccaagtgcggcgccgtggacatcccgttcccgttcggcatcggcgagcactgcgggctcgaggcgccttacacaaactacccgttcaagttcgactgcaagcccgttgacggcaccagcaagcctttcttcaggggtatggaggtgaccaagatctccatggaagacggcaaggcctggatgaagatgaacatatccaagaactgctacaaccagtcgacgggcaccagggaggacaacaccaacacaacatctgtgagcttcagccgctcgcctttctggatatcggacagggataacaagatcatcgtcatcgggtgcgaaacgttttcgtatatgcagatcaataatgttttaacaggttgtgtgccctcatgcggaaacgaccccaaggacggtatatgttccggtgaagcgggttgctgcaaacttgatttccccaatggcacatggtactatagtacttatttcagtaaaagaaataataacagcagtccttgcagcttcataacagtgatggaaaccacaAccttcaacttcaacaaaaattatttcaactccactacattctatgacacatacaatggGttagctaaggtttccctagattggatcataacaatggattcatgtgatcgagtcaaaagaaacactacttcatatgcatgcattagtggaaaaagtcgttgtgTTGatgatccaaagggaggttaccgctgcaagtgctCTgatggatatgaaggcaatccatacgttaaggatggatgcaaagatattaatgagtgcctcaAcaatgctacttacccttgtccgggaatatgtaagaatacgttggggaatttcacctgctcatgctaccctggaaactatatgatgaatggaatttgcattccaaatcagaagtctggttttcctaaaaatcttgtaataggagcaagtgttggggccgtattactagtgattatagtaacttatgcatgcttcatcagagagaagagaatgctacagtatgtcaaaaggcggtacttccgccaacatggtggtatgttgctattcgaagagataaaatctcaacaaggcatttcattcaaaAtcttctcagaagaagaattgcaacaagcaacaaacaagtttgacaaacaacaagtccttggccaaggaggcaatgcaactgtttacaagggacttctcaagggaaacatggaaatagccgtcaaaagatgcatcacaattgatatgaaacaaaagaaagaattcggcaaggaaatgctaatcttgtcccaaatcaaccataggaacgttgtcaaattattgggttgctgcctcgaagtagaagttccgatgcttgtctatgagttcattccaaatggcacattgttctctctcatccacgggaaccacaatcaacacatctccttggatactcgcttacgcattgcacatgaatctgcagaggctcttgcctatttacactcatgggcatcaccaccgatcctccatggcgatgtcaagtcctcaaatatcctcttagacaaagattatgtagcaaaagtttctgacttcggtgcttccatcctagcaccaactgatgagtcgcagttcgtcactctcgttcaaggaacttgtggatacctcgatccagagtacatgcaaacatgccagttaacagataaaagtgatgtatatagctttggagttgttattctagaattgctcacaagaaagaaagcattcaaccttgaaagccctgaagatgagaggagcctagccatgaggtttctatcagccatgaaggaaaaaagactttctgatattttagatgatctaatcatgacgggagataatttggagtttcttgaagagattgcagagttagcaaagcaatgcttggaaatgtctggtgagaatagaccgttgatgaaggaagttgcagacaagctcgataggttgaggaaggtaatgcaacatccatgggcacaacaaaatcctgaagagatggagagcttacttggggactcttcttacgagatcaacaactcaacggttgagaatacaggaaatttcagcatcaatagtgaacttcagtgtctagaatcaggccgttaa
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| Protein seq | MASRPPLLLQYSSLLLLCLAVSAPPAAAGNVPAPVAAVSKPGCPTKCGAVDIPFPFGIGEHCGLEAPYTNYPFKFDCKPVDGTSKPFFRGMEVTKISMEDGKAWMKMNISKNCYNQSTGTREDNTNTTSVSFSRSPFWISDRDNKIIVIGCETFSYMQINNVLTGCVPSCGNDPKDGICSGEAGCCKLDFPNGTWYYSTYFSKRNNNSSPCSFITVMETTTFNFNKNYFNSTTFYDTYNGLAKVSLDWIITMDSCDRVKRNTTSYACISGKSRCVDDPKGGYRCKCSDGYEGNPYVKDGCKDINECLNNATYPCPGICKNTLGNFTCSCYPGNYMMNGICIPNQKSGFPKNLVIGASVGAVLLVIIVTYACFIREKRMLQYVKRRYFRQHGGMLLFEEIKSQQGISFKIFSEEELQQATNKFDKQQVLGQGGNATVYKGLLKGNMEIAVKRCITIDMKQKKEFGKEMLILSQINHRNVVKLLGCCLEVEVPMLVYEFIPNGTLFSLIHGNHNQHISLDTRLRIAHESAEALAYLHSWASPPILHGDVKSSNILLDKDYVAKVSDFGASILAPTDESQFVTLVQGTCGYLDPEYMQTCQLTDKSDVYSFGVVILELLTRKKAFNLESPEDERSLAMRFLSAMKEKRLSDILDDLIMTGDNLEFLEEIAELAKQCLEMSGENRPLMKEVADKLDRLRKVMQHPWAQQNPEEMESLLGDSSYEINNSTVENTGNFSINSELQCLESGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.619602 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0471200 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g29510 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0471200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013650 | SBH | 0.0 | 6.404607 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0013570 | RBH | 0.0 | 0.452611 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0013830 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013660 | SBH | 0.000000 | 0.059288 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0013760 | RBH | 0.0 | 1.628055 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0300400 | RBH | 0.0478365 | 3.6356185 | 0.2252375 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013660 | RBH | 0.0 | 0.179175 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0290800 | RBH | 0.4039655 | 1.277264 | 1.4154025 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013650 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0013460 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0013550 | RBH | 0.0 | 2.821381 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0013420 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020540 | SBH | 0.000000 | 0.888510 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013960 | SBH | 0.159791 | 1.844438 | 0.178197 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013730 | RBH | 0.0 | 3.324332 | 0.0 |
