Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_07g0017620 | OGI:07058770 | 13/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr07:21919299-21936871 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggccacctttgcgcgccaccgcgtcctcctcctctgccgcctcgccgcggcgctcctcctcgcgccggtggcggcggcccagccgtggcagttctgcgggcagggcggcaactactcggcgaacggcacctaccagtccaacctcgccgggctctccgccaccctccccaagaacgcctccgcgtcccggacgctcttcgccaaggacagcctcggcgccgtcccggacatcgtctacgcgctcgcgctctgccgcggcgacgtcgccaacgccaccgcctgcgagtcctgcgtcgccacggcgttccaggacgcgcagcagctgtgcccctacgacaaggacgcgttcatcgtctacgacctctgctacctcgccttctccaacaggaacatcctcgccgccgccgccgacgacgacgggagccccaggttcctgatgaacacgcagaacgcgagcgcgccggcggaggtgttcgacgccgccgtcgccaccctcctcaacgccaccagcagctacgccgcggagaactcgtccaggcggttcgccacgggggaggaggccttcgatgccgccgctactccgaccatctacgggctgtcccagtgcacgccggacatgtcgccggacgactgccggagctgcctcgggcgcataatcgcgctgatccctcggtacctcagccggaggaagggcgggagggctatcgggatgcgctgcaatttcaggtacgaggtgggtcctttcttcgccggaggctcgatgctgcggctcccggcgccggcgaactcgacgccgacggcgccaaccggaggtgtgttgcagacaaaggggatccacttcttttgcagtaatttatcttggtatttaattagcgcgacaacatctgctcataattaattttccatcaattttgacaaaatgaagacaaccaaacgactattgaagaagaaaactctaaacaaacttgtactatgtgtttaaattgtttctgctgtttaggtaaaaaatgttaccgcgttaagaattgtggtttgctttgcagtactgttgaattgcaaaaataacaaaaaaaaatgtggggaaatataaaaatatctcaatcatggcaactggttgcatggggattactggtcaaagcagcctggtacgctggtagctatcacatattataaccctgtacacttttcttccttttttgggttgatcttgacatttctttagtcctgtttctatcggattcttgaccagaaatggcgaaaagcacgtcttactcaacatttccaactgcaatgcatttatttaccaataaataatactagtatgatgttttcaggaatacttttagaagtacttttccttatcacttgatcacgtctccttcactttccataaatttccccacaatctttcatatttttatttgtattcaattatcctggttgtctactttgccgagatttgtggataccaccagtaataatAaaaagaattgtagatctgatcactccagcgccagagctaggtgaatatggtttcatcttctcgtgtcttttccaattgagcctgattacttggtcagttcacacatttattccaatgtagtgttggtaattaactgcacttccattatgcaacttgtatgtatgtgctttacatgtaaagttcaacaatgattttggtttcctccatgttttcccgtttaattaggaaaagacacgagaagatgaaaccatattctaaaataccttttttaacagtcaaaatagtcctttataatatattgaaaagtgcttgactttattagctttgcggtgtgctgtataggtcaaagtgttgacctgcactaaataagtttctggtgtgacttcgtagcatgtacctttttgaacagaaactttaattatagtggatatgtgtcatcatatttaggttatgaattagtcttgttaagttctatacttctatatgtctgtcttcgcaacaaaaacaagttttatctgtctgaagctgaaatcacttgcctgcaggaagaaagaaaaataaaagtggcacagctctagccattgcactgcccctagttgttatattgttggctacggttgccatttgtctttctgttcagtggtggagaagaagatcaaggtcaaaacagcaaccttcaagtaagttcaccaacaattttgattatagttagagggaaacagtgattccctttgattatctgaatatttttattccctagaaatgaaaaagggtttcatagttggaaatgacgtcatatttcaggaaaacttaatatttcagttaaatcgcatcataatgtgttgttgcccttttttgatagattcaattcaaatggctgaggacattgaaaacacggattcactttttatcgatctatcaacactgcgtgctgcaacgggtaacttttctgagagcaataggattggtgaaggaggatttggttcagtttataaggtaccaatcatatatcattcactttattttagtgcataactatgaacatgctctgcttcagtaagtgagtgcttgcacttatgcagggcgtccttcctagtggtgaagagatagctgtaaagaggctctctatgagttcaagacaaggaatagaagagctaaaaaatgagcttgttttggttgccaaacttcagcagaagaatcttgttaggcttgttggtgtctgcttgcaagaacatgagaaattgcttgtgtatgaatacatgcccaatagaagtatcgacaccattctatttggtactattttctactcagaattcaacaattgcacaagcactactagatctgaactgtacatttccttgccaaaatgtgtttctttacccccccccccccccccaccttcttgaatcaggtcttcaacccaagccaaacacttggaattcacatgcacttgtcatcatgaatatatcttagtggtaaaactgtggtttactaagacatttcttgttcaattgacagatcttgagaaaaggaaggagttagactggggaaaaagatttaggataataaatggaattgctcgcgcattacagtatcttcatgaagattctcaactgagaataattcaccgagacctcaaagcaagcaatgttctattagactccgattatacccctaagatttcagattttggcttggcaagactatttgggggtgatcaaacaagggaagtcacgagccgtgtagtaggaacatagtaagtattgtctaaactaacccaatcagatacaaatagtatgctggcatgagtaactttattctcttactgcagcggatatatggcaccagaatatgcgatgcgtggccactattctgtaaagtcagacgtctttagctttggcatattgatgatagaaattgtgacaggaagaagaagcagtggttcatatagctttgatcaatcatatgatctcctaagccgtgttagtcctttttcctggactattctacaaagctaatcagaatgatctcctaacttgttacaaaaattctgaatcatctttgccaatatgatgcaggtatgggagcactggaccatgggaacaattttggagatgatggatccctctcttacaagccatgctcctcgagaccagatgctcaagtgtattcacattgggctactgtgtgttcaagataacccagcagatcgacctatgatgtcaacagtgaatatcatgcttagcagcaacacagtgtctcttcaatccccatccaaaccatcatttttcattcccaagagtggtacagactcaaatatatactcggaatcatacccacaaacttcccaaccgacccataggtctgggatgatgtcagttaatgatgtgtctgttacagagcttgaaccaagataaataaatcaattttctgaatgaaagataggaaaatcaattgcaaggacaatcagattgctatctgtcaaacttacagggagaaagccttcgataatttgtattactgaattctgaatgcatttctccattgattgagtcaatatattatgttttagtttatttgttaattgttagtacacgtcacatttgtttacgatttggaaaagggctattcatcaagtgacagaaatttcaatgcctcccacttttcctatcctttggatgagatctaactacgctcatcattcccacaacttttctcattgtttctttttatacaggttgaacaaattaatctaaccatacaataaatttcaaaatgacgaacctatacaaaaatgtaaatacagaatactgaggtaacgtaaacccaagtacataaacaaaattgcagtgaagtttaactaaagttagccttgcaatttttggtgactacaagataataaaacttcaagcaaccaaaatttagcaaaaccttgtcaacaaaaactttacccttttctccatgcgcttctattaaaaagagcaattttacagtgcttgaggaggttccatgaattaccaaaaatttaatgtaaaatttggtacctcatattacctaggtaacaaatttacaatagaaaaagtaaaacctcatgtaacctcttcaaggactgtaaaattactctctattacaaaagtttacaaatattttgaaatcactggtttgtagcacaggaactcaggctccatggagccactgaaccacaagttttcagtatattttgctgtctttgattcttttggtaatcagtctggtacattgcgttatatacttatgaaagcctaacctaacctggcaaagaatccttcagcggaatggcagatcccacacagcgagcacagtttcaccgttgcacacttctacagttacttgccttgcaccgacgccgccgtcgacgtaccagacgacgtgccccccgagctggcaccggcaccgccgccgccgccgccgttcctcctggcacagaacgccggcttggacggcgccctgagcgagaccgtgtcgctgccgagcat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| CDS seq | atggccacctttgcgcgccaccgcgtcctcctcctctgccgcctcgccgcggcgctcctcctcgcgccggtggcggcggcccagccgtggcagttctgcgggcagggcggcaactactcggcgaacggcacctaccagtccaacctcgccgggctctccgccaccctccccaagaacgcctccgcgtcccggacgctcttcgccaaggacagcctcggcgccgtcccggacatcgtctacgcgctcgcgctctgccgcggcgacgtcgccaacgccaccgcctgcgagtcctgcgtcgccacggcgttccaggacgcgcagcagctgtgcccctacgacaaggacgcgttcatcgtctacgacctctgctacctcgccttctccaacaggaacatcctcgccgccgccgccgacgacgacgggagccccaggttcctgatgaacacgcagaacgcgagcgcgccggcggaggtgttcgacgccgccgtcgccaccctcctcaacgccaccagcagctacgccgcggagaactcgtccaggcggttcgccacgggggaggaggccttcgatgccgccgctactccgaccatctacgggctgtcccagtgcacgccggacatgtcgccggacgactgccggagctgcctcgggcgcataatcgcgctgatccctcggtacctcagccggaggaagggcgggagggctatcgggatgcgctgcaatttcaggtacgaggtgggtcctttcttcgccggaggctcgatgctgcggctcccggcgccggcgaactcgacgccgacggcgccaaccggaggaagaaagaaaaataaaagtggcacagctctagccattgcactgcccctagttgttatattgttggctacggttgccatttgtctttctgttcagtggtggagaagaagatcaaggtcaaaacagcaaccttcaaattcaattcaaatggctgaggacattgaaaacacggattcactttttatcgatctatcaacactgcgtgctgcaacgggtaacttttctgagagcaataggattggtgaaggaggatttggttcagtttataagggcgtccttcctagtggtgaagagatagctgtaaagaggctctctatgagttcaagacaaggaatagaagagctaaaaaatgagcttgttttggttgccaaacttcagcagaagaatcttgttaggcttgttggtgtctgcttgcaagaacatgagaaattgcttgtgtatgaatacatgcccaatagaagtatcgacaccattctatttggtactattttctactcagaattcaacaattgcacaagcactactagatctgaactcggatatatggcaccagaatatgcgatgcgtggccactattctgtaaagtcagacgtctttagctttggcatattgatgatagaaattgtgacaggaagaagaagcagtggttcatatagctttgatcaatcatatgatctcctaagccgtgtatgggagcactggaccatgggaacaattttggagatgatggatccctctcttacaagccatgctcctcgagaccagatgctcaagtgtattcacattgggctactgtgtgttcaagataacccagcagatcgacctatgatgtcaacagtgaatatcatgcttagcagcaacacagtgtctcttcaatccccatccaaaccatcatttttcattcccaagagtggtacagactcaaatatatactcggaatcatacccacaaacttcccaaccgacccataggtctgggatgatgtcagctcagagttgccgcgcaaggttcgtccgtcaaagaagggaaagaggaattgtacgttgcattctgccggccgcggcaatgctcgcagttgtagtcgtcgtcgttgccgtgctgctgccgctcgccgcggcgcagcagaccatgcagttctcgtcatgcgccagcggcgcctacgcggcgaacagcacgtacgaggcgaacctcgccgtcctcgcggcggcgctcccgggcaacgcgtccaccgcggtggcgggggcggcggccggctacgccacggccaccgtcggcgcggtgcccgaccaggtgtccgcgctggcgctgtgccgcggcgacgcgaacgccacggcgtgccgcgcgtgcgtcgcggcgtcgttccgcgtcgcgcggcgggactgcccccgcagcaaggacgccaccacctaccaggacggctgcatcgtccgcttctccgaccagcggttcctcgacttcgtcggcgtgaactcgccggtcagcgagctctactccgacgccgacagcaacatcacggccgtcccggtggcctggttcaacgccgccgtcgtcgcgctgatgaacgcgacggtggacacggccgtggccgccggcagcggcagcaacaacaccaagaagtacttcgccacggcggtggagggcttcgacccgaagcactacccgaagatttacgggatggcgcagtgcgcgccggtgatgacggcggcgcagtgccggagctgcctcggcggcttcgtctcgtcgatcccatggttcttgaacgggaagcccggagggagagttcttgggatttggtgcaacctgaggtacagcgtgaagccgttctatcagggccagccaatgctgcagatttctgcgccgccggagccaccgccgccggccatgccttcacttgctgctccgccgactagaacagcgaggagaaggagagttgcagggatctctgcaggcgtcgcttgcttcgttgtcttgatgttgatactgtcagcttatgctttcattcgtttcaagagaaagaaggctgcaaagaaagacaacttattgaagaaaatggcaagaggaaaatgcacgatctttgatttggctacactgaaagaggcaactgagaacttctcagagaagcataagcttggagaaggcggatttggtactgtatataagggaaaattaccagacggccaagaaatagcagtaaagaagctcatagaaagttgtgggcatggactgaatcagctacacaatgaagtgctggtgttggcagagcttcagcacaagaaccttgttaggctacaggggttttgcgtccataaggatgagatgttgcttgtttatgaatacataaaaaatgggagcctcgacaactttttatttgcacatgctagtagaggaaatgcactaagttgggaccaacagtacaacatcatttttggaattgccaagggaataatgtaccttcacgaggactcaagcataaggatcatccacagagaccttaaagctaacaatattctgcttgatgaggatatggatccaaaaattgcagactttggactagcaagactgataggaggaggtcatactcacacaaagacaactagaattgttggaacatacggatatatggcaccagagtatgcaatacacggaaatgtgtcaccaaagattgacattttcagctttggcgtgctggtacttgaaattgtaaccaagagaaagaactgcagctatggcgatggcaccactgacacagtgaatctcctaagtgatgtatggagttactggaccgaaggtgtgatttcacaggtaattgaccaatcacttgaagggcactttcgaaaccaggcgctaagatgcatccacattgggctgctgtgtgtccaatcagatcctgacgacaggccggacattccatcagtcattttcatgctaaccagggataacatggagcttcagccaccaacagagcctgcattcttcttcaacggaaactcgaactcagcttctcaaacatctgaccagcgcgtctatgtgtacgatcggtctggtaagatctatgaagaggatatctctgcgaatgggatcacacttactgacatatatcctagatag
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| Protein seq | MATFARHRVLLLCRLAAALLLAPVAAAQPWQFCGQGGNYSANGTYQSNLAGLSATLPKNASASRTLFAKDSLGAVPDIVYALALCRGDVANATACESCVATAFQDAQQLCPYDKDAFIVYDLCYLAFSNRNILAAAADDDGSPRFLMNTQNASAPAEVFDAAVATLLNATSSYAAENSSRRFATGEEAFDAAATPTIYGLSQCTPDMSPDDCRSCLGRIIALIPRYLSRRKGGRAIGMRCNFRYEVGPFFAGGSMLRLPAPANSTPTAPTGGRKKNKSGTALAIALPLVVILLATVAICLSVQWWRRRSRSKQQPSNSIQMAEDIENTDSLFIDLSTLRAATGNFSESNRIGEGGFGSVYKGVLPSGEEIAVKRLSMSSRQGIEELKNELVLVAKLQQKNLVRLVGVCLQEHEKLLVYEYMPNRSIDTILFGTIFYSEFNNCTSTTRSELGYMAPEYAMRGHYSVKSDVFSFGILMIEIVTGRRSSGSYSFDQSYDLLSRVWEHWTMGTILEMMDPSLTSHAPRDQMLKCIHIGLLCVQDNPADRPMMSTVNIMLSSNTVSLQSPSKPSFFIPKSGTDSNIYSESYPQTSQPTHRSGMMSAQSCRARFVRQRRERGIVRCILPAAAMLAVVVVVVAVLLPLAAAQQTMQFSSCASGAYAANSTYEANLAVLAAALPGNASTAVAGAAAGYATATVGAVPDQVSALALCRGDANATACRACVAASFRVARRDCPRSKDATTYQDGCIVRFSDQRFLDFVGVNSPVSELYSDADSNITAVPVAWFNAAVVALMNATVDTAVAAGSGSNNTKKYFATAVEGFDPKHYPKIYGMAQCAPVMTAAQCRSCLGGFVSSIPWFLNGKPGGRVLGIWCNLRYSVKPFYQGQPMLQISAPPEPPPPAMPSLAAPPTRTARRRRVAGISAGVACFVVLMLILSAYAFIRFKRKKAAKKDNLLKKMARGKCTIFDLATLKEATENFSEKHKLGEGGFGTVYKGKLPDGQEIAVKKLIESCGHGLNQLHNEVLVLAELQHKNLVRLQGFCVHKDEMLLVYEYIKNGSLDNFLFAHASRGNALSWDQQYNIIFGIAKGIMYLHEDSSIRIIHRDLKANNILLDEDMDPKIADFGLARLIGGGHTHTKTTRIVGTYGYMAPEYAIHGNVSPKIDIFSFGVLVLEIVTKRKNCSYGDGTTDTVNLLSDVWSYWTEGVISQVIDQSLEGHFRNQALRCIHIGLLCVQSDPDDRPDIPSVIFMLTRDNMELQPPTEPAFFFNGNSNSASQTSDQRVYVYDRSGKIYEEDISANGITLTDIYPR |
||||||||||
| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0017620 | OsLima_07g0017620.02 | Chr07 | 21931875 | 21936871 | + | NAM | ||
| CDS seq | atgcagatattctgcctattgagaaaaaaaaaattctccccttccccccttcccccctttgctgcgatgatgctcgccggctatggcatcctcgccgttgtcctcgtcctcctgccgccgtcggccacgccggctgggatcgctgactgcgacctcggcgtcggcaacacgtacgtgggcaacagcacgttcgaggcgaacctgaaccacctcgccgcggagctccccggcaacgtctccacggcgcataccggcggcttcgcggtcgccaccgtcggcgcggatcccgaccaggtgttcgcgctggcgctctgccgcggcgacgtgaacgccacagcctgccgcgcgtgcgtcgcggcggcgttcgtcgacgggaagaatgcttgccccggcatcaatggcgtcaccgtgtacgaggacgcctgcgtagttcgcttctccggccagaggttcatggatttcctcagtccggatcagtggcaggtcaccgagatgatttgggttcccgagcaagcctcggagagcgtcaatgcgccggcggttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgaccacgccgtggccacggcgacgggcaacaactcgaccaccaagaagtatttcgccacgggtgaggaggacttcgaccccaacatctacgggttcgcgcagtgcgtgccggacctgacgccggagcagtgcaaggaatgcctcaacaccttcctttttcaagcaaaacaagtgtactttggcaagagccttagctgggttggtatgaattcggtgtggtgcagactgatgtatagtgtgcggccgttctacggaggccgggcgatgctgcagctgtcggcgccaccaccaccagcagccgaggctccggttctatctctagagcctggagcagggaagaaaaagagtgcagctggaatcgctgccgtcgtcgcttcttcagttgtggtattgttgatcctttcattttttgcagttgttctcttcaggagaaggtccaaggttactgagactgaccaccagttgaggaagataacaagagcacaatgcttgatttttgacctgccagctctgcaagaggcaacggataacttctcggacaataataagctcggagaaggtggttatggtattgtatacaagggagtactctcagatggacaagaagtagcagtgaagaaacttttgggaacaagtgagcatggattggatcagctacaaaatgaggtgttgttattggcagagcttcaacacaagaaccttgttaagctacaagggttttgcttgcatcagggggaaacactgcttgtttatgaatacgtcaagaacgggagcctggataactttctattcgataccagtaggggaaacacaccaaactggaagcaactgtacaacatcatttttggaattgccaagggaatattgtatcttcacgaggactcaagcttgaggatcattcaccgagacctgaaatcaaacaacatcctacttggggaggacatggaaccaaaaattgcagattttggattggcaaggctactagaagaaggtcatactaatactcggacaactagaattgttggaacattgtaa
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| Protein seq | MQIFCLLRKKKFSPSPLPPFAAMMLAGYGILAVVLVLLPPSATPAGIADCDLGVGNTYVGNSTFEANLNHLAAELPGNVSTAHTGGFAVATVGADPDQVFALALCRGDVNATACRACVAAAFVDGKNACPGINGVTVYEDACVVRFSGQRFMDFLSPDQWQVTEMIWVPEQASESVNAPAVGWFNAAVAKILAALVDHAVATATGNNSTTKKYFATGEEDFDPNIYGFAQCVPDLTPEQCKECLNTFLFQAKQVYFGKSLSWVGMNSVWCRLMYSVRPFYGGRAMLQLSAPPPPAAEAPVLSLEPGAGKKKSAAGIAAVVASSVVVLLILSFFAVVLFRRRSKVTETDHQLRKITRAQCLIFDLPALQEATDNFSDNNKLGEGGYGIVYKGVLSDGQEVAVKKLLGTSEHGLDQLQNEVLLLAELQHKNLVKLQGFCLHQGETLLVYEYVKNGSLDNFLFDTSRGNTPNWKQLYNIIFGIAKGILYLHEDSSLRIIHRDLKSNNILLGEDMEPKIADFGLARLLEEGHTNTRTTRIVGTL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_07g0017620 | OsLima_07g0017620.01 | Chr07 | 21919299 | 21931952 | + | NAM | ||
| CDS seq | atggccacctttgcgcgccaccgcgtcctcctcctctgccgcctcgccgcggcgctcctcctcgcgccggtggcggcggcccagccgtggcagttctgcgggcagggcggcaactactcggcgaacggcacctaccagtccaacctcgccgggctctccgccaccctccccaagaacgcctccgcgtcccggacgctcttcgccaaggacagcctcggcgccgtcccggacatcgtctacgcgctcgcgctctgccgcggcgacgtcgccaacgccaccgcctgcgagtcctgcgtcgccacggcgttccaggacgcgcagcagctgtgcccctacgacaaggacgcgttcatcgtctacgacctctgctacctcgccttctccaacaggaacatcctcgccgccgccgccgacgacgacgggagccccaggttcctgatgaacacgcagaacgcgagcgcgccggcggaggtgttcgacgccgccgtcgccaccctcctcaacgccaccagcagctacgccgcggagaactcgtccaggcggttcgccacgggggaggaggccttcgatgccgccgctactccgaccatctacgggctgtcccagtgcacgccggacatgtcgccggacgactgccggagctgcctcgggcgcataatcgcgctgatccctcggtacctcagccggaggaagggcgggagggctatcgggatgcgctgcaatttcaggtacgaggtgggtcctttcttcgccggaggctcgatgctgcggctcccggcgccggcgaactcgacgccgacggcgccaaccggaggaagaaagaaaaataaaagtggcacagctctagccattgcactgcccctagttgttatattgttggctacggttgccatttgtctttctgttcagtggtggagaagaagatcaaggtcaaaacagcaaccttcaaattcaattcaaatggctgaggacattgaaaacacggattcactttttatcgatctatcaacactgcgtgctgcaacgggtaacttttctgagagcaataggattggtgaaggaggatttggttcagtttataagggcgtccttcctagtggtgaagagatagctgtaaagaggctctctatgagttcaagacaaggaatagaagagctaaaaaatgagcttgttttggttgccaaacttcagcagaagaatcttgttaggcttgttggtgtctgcttgcaagaacatgagaaattgcttgtgtatgaatacatgcccaatagaagtatcgacaccattctatttggtactattttctactcagaattcaacaattgcacaagcactactagatctgaactcggatatatggcaccagaatatgcgatgcgtggccactattctgtaaagtcagacgtctttagctttggcatattgatgatagaaattgtgacaggaagaagaagcagtggttcatatagctttgatcaatcatatgatctcctaagccgtgtatgggagcactggaccatgggaacaattttggagatgatggatccctctcttacaagccatgctcctcgagaccagatgctcaagtgtattcacattgggctactgtgtgttcaagataacccagcagatcgacctatgatgtcaacagtgaatatcatgcttagcagcaacacagtgtctcttcaatccccatccaaaccatcatttttcattcccaagagtggtacagactcaaatatatactcggaatcatacccacaaacttcccaaccgacccataggtctgggatgatgtcagctcagagttgccgcgcaaggttcgtccgtcaaagaagggaaagaggaattgtacgttgcattctgccggccgcggcaatgctcgcagttgtagtcgtcgtcgttgccgtgctgctgccgctcgccgcggcgcagcagaccatgcagttctcgtcatgcgccagcggcgcctacgcggcgaacagcacgtacgaggcgaacctcgccgtcctcgcggcggcgctcccgggcaacgcgtccaccgcggtggcgggggcggcggccggctacgccacggccaccgtcggcgcggtgcccgaccaggtgtccgcgctggcgctgtgccgcggcgacgcgaacgccacggcgtgccgcgcgtgcgtcgcggcgtcgttccgcgtcgcgcggcgggactgcccccgcagcaaggacgccaccacctaccaggacggctgcatcgtccgcttctccgaccagcggttcctcgacttcgtcggcgtgaactcgccggtcagcgagctctactccgacgccgacagcaacatcacggccgtcccggtggcctggttcaacgccgccgtcgtcgcgctgatgaacgcgacggtggacacggccgtggccgccggcagcggcagcaacaacaccaagaagtacttcgccacggcggtggagggcttcgacccgaagcactacccgaagatttacgggatggcgcagtgcgcgccggtgatgacggcggcgcagtgccggagctgcctcggcggcttcgtctcgtcgatcccatggttcttgaacgggaagcccggagggagagttcttgggatttggtgcaacctgaggtacagcgtgaagccgttctatcagggccagccaatgctgcagatttctgcgccgccggagccaccgccgccggccatgccttcacttgctgctccgccgactagaacagcgaggagaaggagagttgcagggatctctgcaggcgtcgcttgcttcgttgtcttgatgttgatactgtcagcttatgctttcattcgtttcaagagaaagaaggctgcaaagaaagacaacttattgaagaaaatggcaagaggaaaatgcacgatctttgatttggctacactgaaagaggcaactgagaacttctcagagaagcataagcttggagaaggcggatttggtactgtatataagggaaaattaccagacggccaagaaatagcagtaaagaagctcatagaaagttgtgggcatggactgaatcagctacacaatgaagtgctggtgttggcagagcttcagcacaagaaccttgttaggctacaggggttttgcgtccataaggatgagatgttgcttgtttatgaatacataaaaaatgggagcctcgacaactttttatttgcacatgctagtagaggaaatgcactaagttgggaccaacagtacaacatcatttttggaattgccaagggaataatgtaccttcacgaggactcaagcataaggatcatccacagagaccttaaagctaacaatattctgcttgatgaggatatggatccaaaaattgcagactttggactagcaagactgataggaggaggtcatactcacacaaagacaactagaattgttggaacatacggatatatggcaccagagtatgcaatacacggaaatgtgtcaccaaagattgacattttcagctttggcgtgctggtacttgaaattgtaaccaagagaaagaactgcagctatggcgatggcaccactgacacagtgaatctcctaagtgatgtatggagttactggaccgaaggtgtgatttcacaggtaattgaccaatcacttgaagggcactttcgaaaccaggcgctaagatgcatccacattgggctgctgtgtgtccaatcagatcctgacgacaggccggacattccatcagtcattttcatgctaaccagggataacatggagcttcagccaccaacagagcctgcattcttcttcaacggaaactcgaactcagcttctcaaacatctgaccagcgcgtctatgtgtacgatcggtctggtaagatctatgaagaggatatctctgcgaatgggatcacacttactgacatatatcctagatag
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| Protein seq | MATFARHRVLLLCRLAAALLLAPVAAAQPWQFCGQGGNYSANGTYQSNLAGLSATLPKNASASRTLFAKDSLGAVPDIVYALALCRGDVANATACESCVATAFQDAQQLCPYDKDAFIVYDLCYLAFSNRNILAAAADDDGSPRFLMNTQNASAPAEVFDAAVATLLNATSSYAAENSSRRFATGEEAFDAAATPTIYGLSQCTPDMSPDDCRSCLGRIIALIPRYLSRRKGGRAIGMRCNFRYEVGPFFAGGSMLRLPAPANSTPTAPTGGRKKNKSGTALAIALPLVVILLATVAICLSVQWWRRRSRSKQQPSNSIQMAEDIENTDSLFIDLSTLRAATGNFSESNRIGEGGFGSVYKGVLPSGEEIAVKRLSMSSRQGIEELKNELVLVAKLQQKNLVRLVGVCLQEHEKLLVYEYMPNRSIDTILFGTIFYSEFNNCTSTTRSELGYMAPEYAMRGHYSVKSDVFSFGILMIEIVTGRRSSGSYSFDQSYDLLSRVWEHWTMGTILEMMDPSLTSHAPRDQMLKCIHIGLLCVQDNPADRPMMSTVNIMLSSNTVSLQSPSKPSFFIPKSGTDSNIYSESYPQTSQPTHRSGMMSAQSCRARFVRQRRERGIVRCILPAAAMLAVVVVVVAVLLPLAAAQQTMQFSSCASGAYAANSTYEANLAVLAAALPGNASTAVAGAAAGYATATVGAVPDQVSALALCRGDANATACRACVAASFRVARRDCPRSKDATTYQDGCIVRFSDQRFLDFVGVNSPVSELYSDADSNITAVPVAWFNAAVVALMNATVDTAVAAGSGSNNTKKYFATAVEGFDPKHYPKIYGMAQCAPVMTAAQCRSCLGGFVSSIPWFLNGKPGGRVLGIWCNLRYSVKPFYQGQPMLQISAPPEPPPPAMPSLAAPPTRTARRRRVAGISAGVACFVVLMLILSAYAFIRFKRKKAAKKDNLLKKMARGKCTIFDLATLKEATENFSEKHKLGEGGFGTVYKGKLPDGQEIAVKKLIESCGHGLNQLHNEVLVLAELQHKNLVRLQGFCVHKDEMLLVYEYIKNGSLDNFLFAHASRGNALSWDQQYNIIFGIAKGIMYLHEDSSIRIIHRDLKANNILLDEDMDPKIADFGLARLIGGGHTHTKTTRIVGTYGYMAPEYAIHGNVSPKIDIFSFGVLVLEIVTKRKNCSYGDGTTDTVNLLSDVWSYWTEGVISQVIDQSLEGHFRNQALRCIHIGLLCVQSDPDDRPDIPSVIFMLTRDNMELQPPTEPAFFFNGNSNSASQTSDQRVYVYDRSGKIYEEDISANGITLTDIYPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.020201 | 0.093346 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0537600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35330 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0537600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017990 | RBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017900 | RBH | 0.0 | 2.270456 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017860 | SBH | 0.103705 | 1.116436 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017780 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017880 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0343900 | RBH | 0.3214865 | 7.772769 | 0.2566145 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018370 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358400 | RBH | 1.1841445 | 13.820534 | 1.580925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017940 | SBH | 0.026354 | 0.135489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017780 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017720 | RBH | 0.0 | 3.643550 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018000 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017790 | RBH | 0.0 | 1.885295 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017780 | RBH | 0.000000 | 0.000000 | 0.088755 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017630 | RBH | 0.466285 | 10.423672 | 0.741305 |
