Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0011200 | OGI:06026520 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:9581837-9585241 | ||||||||
| Gene Symbol | OsSERL2, SERL2, SERK1, OsBAK1-7, BAK1-7 | ||||||||||
| DNA seq | atggagccgcccttcttcttcctcctcctgctgctgctcgtggtctcctcctcctctccttccgccgccctcctctccgccaagggcgtcaacaacgaaggtaaggttcagttcagttcatcccttcctctctcttgtttcctctgttcgtttcttgcatttgggtgtgtgctgattgattgattggttggttgattggcagtgcaagctctgattgtgatcaagaacctgctcaaggacccccatggcgtgctcaagagctgggaccagaactccgtcgacccctgcagctgggccatgatcacctgctcccctgatttcctcgtcactggcctgtatgtgaactctcaccttccattgcttcacattctcaatccacctctcaccatttgttctcttctcttctcttctctgctgcttctctgaatactctgaatattttttcagggaagctccaagccagcatctctctggcctgctcgcaccaagcatcggcaacctgaccaatcttgagactgtgtcagtagtgttcttcttcttcttcttcttctacttcacatcaatccatagccttatcacggtcagttcttgtacttaaacagagtgtttcttttctttgatgtgctggtgggtgcagtctcctgcagaacaacaacataaccgggccaatcccagcagagattggcaggctggagaacctcaagacgcttgatctctccagcaacagcttctatggcgaaatccccagctctgtgggccacctcgagagcctccagtacttgtgagtcgagagctccactgttcaaagcctctgaatactgttccatttattttgtagtaaagataattataagcacactgttcttgattatgatatctagatatgtagcagtatcatatcatatctacacatagttattgtggttgttctccgtttttttgttgccatgttaattaagtttgagttaactctgttgctgtgaaatttgatcaggaggctcaacaacaacaccctgtctggtccattcccttctgcatcagctaacctgtcacaccttgttttcctgtgagtaaattcatctcagttttgggttgttgcaattaatcagttcgattttgtctcaacctgcttactggtgtcattcattcagagatgctttgtcttgctctgctctttcttgagctatattaacttattttaagtgtactattcagtttggtttgtctcatcactctgcatacactttgtgttcttcttcagagatttgtcatataacaacctgagtggcccgattccaggatcattggcaagaacttacaagtaaggctgcagtttcaagttcatcaattcttccaacaagaagaaaaaaaaatcttccaatttttttttgttgggttcatgaacaattgcatatggtttttttcttgcagcatagtggggaatcccctcatctgcgacgccaacagggagcaggattgctacgggacggcgccgatgccgatgagctacagcctgaacggctcgcggggcggcgcgctgccgccggcggcgagggacagggggcacaagttcgccgtcgcgttcggctccaccgccggctgcatgggcctcctcctcctcgccgccggtttcctcttctggtggcgccaccgccgcaaccggcagatcctcttcgacgtcgacggtaaacctcggtcttttctcgcagctaacctacctgcatttcatcatccataattcttagagaaattattttcaggcttttgtccagagttttattgtggattatttgctccacgcttctttaaaaaaaaacgatttttcgaaaaaaaaagactatttgttctaagcttttggtaccttgtaataccttaattttacgctagtgccttcttcgaagtcgatggtaacatcaatctttttccaaaacaacctgcatttcgtcattaattccaagagaaattattgtcagcttttgtctaagatttttggtacggattattcgctccatgcttcttagaattctaaaaagaaaaaaaaaacttctgctgtcatattcacctgttctaaactattgtgaagtttatttctcaaaatattgatttattgtgttaagtaagtaaacaatccgcctcaataattcacacaaaaatcttatttcaaacatcgagtacacaaaattatagcgtaaaatttgatatctcatgacatctaaataatgcaaacccaccgacattcacactagtggtatcttccgaaggaccgtaaaatcactccaattttgaacactaacaaggtctattactattaaatctctaataaatctgattattaatgttaataaactaaaattgcagagcagcagattgagaacgtgaacctggggaacgtgaagaggttcagcttcagggagctgcaggcggcgacggaggggttcagcgggaagaacatcctggggaaaggagggttcgggaacgtgtacagggggcagctccccgacgggacgctggtggcggtgaagcggctcaaggacggcaacgccgccggcggcgaggcccagttccagacggaggtggagatgatcagcctcgccctccaccgcaacctcctccgcctctacggcttctgcatgaccgccaccgagcgcctcctcgtctaccccttcatgtccaacggcagcgtcgcctcccgcctcaaaggtaaccaaaccaaattcgtactacaaattattatttctagtactgtatctatttttcctttcttctcaagattatgaattgctctttttttttgtcctaaaatatataacaatctagtagtatgaaatgagatacatcataataatatgaattcaaacagattttctgttcgggttcgtaatgttaggatatgtctcatctcagtactaggttgctatattttactctctctattttaaaacaaagtaaaatagtacgagatgcgatacattataatactatgaattgaaacaggcattatgttcagatttgaagtattatgatatatcacatctagtactgaattctatattttaagagataaattttaccatttttgagaggtatgaaaatgtaccaaaatttattgcaaatttccgtaactcctaggtatatataccaaattttatactgaaaaatatagtacatctcaatatctcattaagaacggtaaaatcactcattttgagggagaggcagtacaagattcagacaatgaccacggacagagtccggtagaattcctccaacatgcagcagctcgaatgttcttttctcgatatgacagcagaaatctgagtggaacaacagcagcagcatatgttctttgctggatttttcatatcataccggacctaaaagagaggtgcagaatcgaaagactga
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| CDS seq | atggagccgcccttcttcttcctcctcctgctgctgctcgtggtctcctcctcctctccttccgccgccctcctctccgccaagggcgtcaacaacgaagtgcaagctctgattgtgatcaagaacctgctcaaggacccccatggcgtgctcaagagctgggaccagaactccgtcgacccctgcagctgggccatgatcacctgctcccctgatttcctcgtcactggcctggaagctccaagccagcatctctctggcctgctcgcaccaagcatcggcaacctgaccaatcttgagactgttctcctgcagaacaacaacataaccgggccaatcccagcagagattggcaggctggagaacctcaagacgcttgatctctccagcaacagcttctatggcgaaatccccagctctgtgggccacctcgagagcctccagtacttgaggctcaacaacaacaccctgtctggtccattcccttctgcatcagctaacctgtcacaccttgttttcctagatttgtcatataacaacctgagtggcccgattccaggatcattggcaagaacttacaacatagtggggaatcccctcatctgcgacgccaacagggagcaggattgctacgggacggcgccgatgccgatgagctacagcctgaacggctcgcggggcggcgcgctgccgccggcggcgagggacagggggcacaagttcgccgtcgcgttcggctccaccgccggctgcatgggcctcctcctcctcgccgccggtttcctcttctggtggcgccaccgccgcaaccggcagatcctcttcgacgtcgacgagcagcagattgagaacgtgaacctggggaacgtgaagaggttcagcttcagggagctgcaggcggcgacggaggggttcagcgggaagaacatcctggggaaaggagggttcgggaacgtgtacagggggcagctccccgacgggacgctggtggcggtgaagcggctcaaggacggcaacgccgccggcggcgaggcccagttccagacggaggtggagatgatcagcctcgccctccaccgcaacctcctccgcctctacggcttctgcatgaccgccaccgagcgcctcctcgtctaccccttcatgtccaacggcagcgtcgcctcccgcctcaaagaatcgaaagactga
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| Protein seq | MEPPFFFLLLLLLVVSSSSPSAALLSAKGVNNEVQALIVIKNLLKDPHGVLKSWDQNSVDPCSWAMITCSPDFLVTGLEAPSQHLSGLLAPSIGNLTNLETVLLQNNNITGPIPAEIGRLENLKTLDLSSNSFYGEIPSSVGHLESLQYLRLNNNTLSGPFPSASANLSHLVFLDLSYNNLSGPIPGSLARTYNIVGNPLICDANREQDCYGTAPMPMSYSLNGSRGGALPPAARDRGHKFAVAFGSTAGCMGLLLLAAGFLFWWRHRRNRQILFDVDEQQIENVNLGNVKRFSFRELQAATEGFSGKNILGKGGFGNVYRGQLPDGTLVAVKRLKDGNAAGGEAQFQTEVEMISLALHRNLLRLYGFCMTATERLLVYPFMSNGSVASRLKESKD |
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| Function | LRR receptor kinase SERL2 [UniProtKB/Swiss-Prot:Q9FP13] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0011200 | OsLima_06g0011200.01 | Chr06 | 9581837 | 9585241 | + | NAM | ||
| CDS seq | atggagccgcccttcttcttcctcctcctgctgctgctcgtggtctcctcctcctctccttccgccgccctcctctccgccaagggcgtcaacaacgaagtgcaagctctgattgtgatcaagaacctgctcaaggacccccatggcgtgctcaagagctgggaccagaactccgtcgacccctgcagctgggccatgatcacctgctcccctgatttcctcgtcactggcctggaagctccaagccagcatctctctggcctgctcgcaccaagcatcggcaacctgaccaatcttgagactgttctcctgcagaacaacaacataaccgggccaatcccagcagagattggcaggctggagaacctcaagacgcttgatctctccagcaacagcttctatggcgaaatccccagctctgtgggccacctcgagagcctccagtacttgaggctcaacaacaacaccctgtctggtccattcccttctgcatcagctaacctgtcacaccttgttttcctagatttgtcatataacaacctgagtggcccgattccaggatcattggcaagaacttacaacatagtggggaatcccctcatctgcgacgccaacagggagcaggattgctacgggacggcgccgatgccgatgagctacagcctgaacggctcgcggggcggcgcgctgccgccggcggcgagggacagggggcacaagttcgccgtcgcgttcggctccaccgccggctgcatgggcctcctcctcctcgccgccggtttcctcttctggtggcgccaccgccgcaaccggcagatcctcttcgacgtcgacgagcagcagattgagaacgtgaacctggggaacgtgaagaggttcagcttcagggagctgcaggcggcgacggaggggttcagcgggaagaacatcctggggaaaggagggttcgggaacgtgtacagggggcagctccccgacgggacgctggtggcggtgaagcggctcaaggacggcaacgccgccggcggcgaggcccagttccagacggaggtggagatgatcagcctcgccctccaccgcaacctcctccgcctctacggcttctgcatgaccgccaccgagcgcctcctcgtctaccccttcatgtccaacggcagcgtcgcctcccgcctcaaagaatcgaaagactga
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| Protein seq | MEPPFFFLLLLLLVVSSSSPSAALLSAKGVNNEVQALIVIKNLLKDPHGVLKSWDQNSVDPCSWAMITCSPDFLVTGLEAPSQHLSGLLAPSIGNLTNLETVLLQNNNITGPIPAEIGRLENLKTLDLSSNSFYGEIPSSVGHLESLQYLRLNNNTLSGPFPSASANLSHLVFLDLSYNNLSGPIPGSLARTYNIVGNPLICDANREQDCYGTAPMPMSYSLNGSRGGALPPAARDRGHKFAVAFGSTAGCMGLLLLAAGFLFWWRHRRNRQILFDVDEQQIENVNLGNVKRFSFRELQAATEGFSGKNILGKGGFGNVYRGQLPDGTLVAVKRLKDGNAAGGEAQFQTEVEMISLALHRNLLRLYGFCMTATERLLVYPFMSNGSVASRLKESKD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.156665 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0274500 | RBH | 2.534365 | 1.250660 | 1.614542 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g16330 | RBH | 1.659398 | 0.819720 | 0.402405 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0274500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011200 | RBH | 0.579223 | 0.000000 | 6.665795 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011110 | RBH | 0.125185 | 3.053854 | 2.537802 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011100 | RBH | 0.571027 | 2.594407 | 4.833282 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011120 | RBH | 0.263135 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0011220 | RBH | 2.354060 | 3.962999 | 11.367749 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0154000 | SBH | 4.045681 | 6.677874 | 0.811108 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0010800 | RBH | 0.451812 | 0.182667 | 0.664456 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0151300 | SBH | 4.2011605 | 2.4113525 | 4.978639 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0031940 | RBH | 0.000000 | 0.333659 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011050 | RBH | 0.0 | 1.859119 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011080 | RBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0011230 | RBH | 0.149205 | 0.000000 | 0.751478 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0010990 | RBH | 0.097085 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G010900 | RBH | 0.659281 | 0.0 | 2.097502 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011220 | RBH | 1.178591 | 6.479115 | 2.862407 |
