Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0009850 | OGI:06021510 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:7888899-7897166 | ||||||||
| Gene Symbol | OsDRP2A, DRP2A | ||||||||||
| DNA seq | gttctcgtctcgcccaaatccaccgcccccacgtctctcgtgcctcctcccccatcccatccccacgcagatttcaaacccgcgtcgcctcggccctggtcgccgccgccgccgccgccgtcgcagcagcagcagcagcgggagcccccgatccgtcgagatccggcgcggggagagggagagggagaggaagggcggggacgcgggagacgatggaggccgtcgaggagctcgcgcagctgtcggaggcgatgcgccaggcggcgtcgctgctggccgacgacgacccctccgacgactccgccccacgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcgtaagtataataggccgccgccgccgttggagccgccgcgatccgcccgcccgctcgctcgctcgctcgtgcgctcccccgatctgatccagttctgatctgcttcgtgcagggggcgggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctggtgagctcgtgctactactactactactactacccgacaactagctcttcgcctatttccattttttgattcttagatttgggggtggtggtggtgcttggggtgcagccgacgggggagaacggggcgacgagggcgccaattgtggtggacctgcagagggacccgggcctcagcagcaagtccatcgtgctgcaaatcgacagcaagtcgcagcaggtgtccgcaagtcagtgggatctcgcaaactttgcgttgctcgattctgtggatgtacttgcgcccgtgggttttcgagatggatatggcgctgaatttgtgatgtctgctgttctcaggttcgctgcggcattcgctgcaggacaggctcagcaagggggcgtccagcggatccagtaggggccgtgtagaggggatcaatctcaagctgcggacgagtacaggttcgtccgcgagtaacatggcgattctggctaacccgttcctgcctcttgttccattagaaatgtagataatatagtgtagaatgatatgtatgatatactgccatgttaggacttggtgaggtattccttgtagtcatggcgcacagatcaaagagataaaatttgggttgttatattgaagttcattgcattttatatgctgtttgtattttgtgctgaagaaagttataaagaatcttcatgttaaaaagaaagttacagagaatcttgtgatgtgtaattgcaaagtagaagtgatccaactttgtttacaacttaatatttcaatgctaactgttgatgagtttatgcttatttttctgtacaaatatgttcttatttcatgtctttctgttgtgcttccctctataaatgtctcacagtacctggcccttcttttttattttcagctcccccactaaagctggttgatttacctgggatagaccagcgagctgttgacgattcaatggtaggttattaaattgtgttggttttcctcattacttgcccattagtacttcttgtatggtaggtgatcaaaaaaataatttaaccactcactattactgtcagtttacatgctatgtgagtataacggtagaaggaataactttttttacggggaggtaacatgaatatcttgtatgatccgtgacattcatatatctgaaaaatggtagcatctaggaaacttcacaatgtgcagttacttcatagattgaattttcccttgaagcgttcatactcatctactatagagagaacaccacatgcattcttctttgatgttttcatgctttccaattttatgctgcagaattctgactgttttctgaattcagattaatgaatatgctgggcacaatgatgcaatactgctagttgtgatacctgcaatgcaagcagctgatgttgcgtcatctcgagctcttaggctggccaaggatattgatgcagatggtctgtctttcaggagtaaatatcttctatagtaccattcattcatttcatcgcaagtgatatttacccatttgttgcaggcaccagaactgtaggtgtgataagtaaagttgatcaagcagaaggagatgcaaaaactatagcttgtgttcaggcccttctgtcgaataagggcccaaaaaaccttccagatatcgagtgggttgctctgataggacaatcagttgcaattgcgtcagctcaagcagcaggttctgaaaactcactagaaacagcatggaatgctgaagctgaaaccctcagatccatcttaactggagctccaaaaagtaaactaggtagaatagctctggttgacaccattgctaagcagatacgtaaacggatgaaagtgcgacttcctaacctattgagtgggtaagaattgtgctttatgcttcaattactgttgtatattgtacctagcatctcttaattatttatcgatgctgcatggtgttagatgaattcatgttcttgctacagtgctgttactcatttcgttgatataatatagcatataattcgaattggttccctcgtacatactgcatgtcatttagtgagtgtttgccgaccatttcccgccctccctctacctctctcgtacgcatttagtttctaccacttttccaccgacacaaagtattctcacacacagaacaatcatgaaagtgtacaattcatttgctcttacatctttcttaatttcatcacctttttaatccttgtgcaaaatctaacatgccttctgttaatggagggaataattcactactatgtgtggtctagtgctaaacttacatacaattgcttcatatgctgctacttcagtcttcagggtaagtcccagatggttcaagatgaactggcacggctgggagaatctatggtacaaagtgctgaagggactcgggctgttgctttggaactctgccgggaattcgaggataagtttcttgctcatattacatctggcgaggttagtaaagagcttcaaacctacttagattttaatcataccttcctaaactgcacaagcaattacaataacaatatactgtcttgtataaataggggtctggttggaaagttgttgcaagttttgaagggaaattcccagagagaattaaacagctgccactggacaggcactttgacctcagcaatgttaaaagggtaagattggatccagtttcaggattagtgctactatcaggcattttcccatcttttatgaacactgaacagtattctctgacattctagattgtcttggaagccgatggttatcaaccgtacctgatatctccagagaaagggttgaggtccttgataaagatagtattggatatggcaaaggagccatcacgactctgtgttgaagaggtatgttctactttattcaaataaagtcttgttaccaataaaaatataacatgtttagatctgttcctttttttcctctcaaggctaagaacgttgtagaaataatgtgtttgtgtttgtaagttactgcaataagaaaatgatgctttttattctctaccagaaaagcgttatcctaaatttgacttttggaggctgggttgggtgcatttgattgaggtagcaatttgttctatggattgagttttttagataagaggtaaaattagggttccattgtttcaacaaataagatacggatgcatgggactacctatctgcttgagttccatacttccatatggtcagatttttgtttatttggtgttatcaattgttgtgtggtatttctatgttatgtactggtgtatattgttatctttgtattgaaaattgtgaacttcttagtttattgcctaggaaaagtaatagttatctttcttaatgcactaggtacatcgtgtattgttagacattgtcaatgcttcagcaaatgccacaccaggacttggaagatatcctccattcaagcgcgaggtatcacctagctattttagagtttctttcctttcgagtttcacgttggtagagtttattgttgactgatgtgagtaaaaaatctatgtttcctttcgcaaggtcattgcaatagcatcaaatgcactagacagcttcaaaaatgatgcaaaaaagatggttgttgcacttgttgatatggagcgcgcctttgttcctcctcagcatttcatccgtctagtgcaaagaaggttgatttttggctagttttcccccttcaattttagttatcatttgtctccaatagttagttaacatttctccctgttcaatttctatacttactttttgataaaatatttgtgttcattcgatttataaattcatttcctgtaatattttgatgttatgaatttagcatggaaatcttagtatgtttcctacgtacgccttcaaagaagtatctttaagtgatccatgaacactgaaggacacatgcaacttcaggttaacttcagctattcttttctagggtctgctttggtagggatgatttatctccaaattcttatcctctttttagagttagatctttaggatattgctcaaattgagctataccaacaattgtcaaagcaatccccagcatccaaacacccccttatcttgaatcagtcgaacatatgattaccagggatatacaatctctttgttgaaattcagcaagttgccctttgcttgataatcaatctttccattatttatattttgtaaagataagataattttatggctacacagttacactatggaatgttgagccttgtcaattttttttaacaatactggcagaatggaaaggcaacgccgtgaggatgaattaaaaaatcgatcctccaagaaaccacaggatgctgaccaacccatgggaaaaagggtaaggcagcctaaatggattttgattcacactgacttgttttgttaggaatacacttatttagattattagacatggtatttcttcttttcaccattacaaggctgaaataactatgctttggttctaggcctccagtccccagacaggatctgagaaagacacaaaagacaaatcagcgaaagacaaagacaaagacaaatcaggccagcaagacaaagacgcaaaagaggggtcctctgtgcaggttgctggttcttctggtgaaattactgcaggtaagaatgtgtcaaatcatgctgtgctcaagctagccattatggaaaaccacaaattttttattgaatttaggctcaagacaggcttaaagcacttctattctagtctaaaaactcattctgtaagaatccaggagttggagctctggtaaacaggccctttgaaccatttggtgaaatgaaacatttgttttgtctcattgtaaaaaagtacatgcaaatataaatattcgttaattttgtacatttttcttcaggttaccttttgaagaaaagtgcaaaaacaaatggatggagtaggaggtggtttgtcctcaatgagaaaagcggaaaggttaatcagagttcaatcatcatcttttagttttgtttgtctttttgcactaacaggaggaatatcaggataatttatttatgtattttccgatggacttctatgcatgggtggttggttaaccttctatttttatcagcttggctacacgaagaaacaagaggagagacattttcgtggtgtcatcactcttgaggtgtgtgcgcaaaccttgtccttaaatttgcatgtaatttattctaccattattgggtttgtttttttgccttatcccttggaaagagctatctgatattggaagaaacatcacatatacatcaacaaatgctgtaaaatgaacttagttggtaacttgaatttgacatcattgtgcaggagtgtaaccttgaagaagtagaggaggaagaacctcctaaaagtttgaaggattcaaaaaaggcaaatgggccagagaaaggcccaagtctcgtctttaagataactaacagggttgcctacaaaacagttctaaaaggttaagatccctgaatacctcagcttgatttttttctttataagacccttgttgtctaaatggtgtatttccttttacagctcatagtgctgttgtattgaaagctgagagcacggccgacaaagttgagtgggtaaataagatacgggctgtaattcaaagcaaagggggatcattcaagggtccaaatactgatggtggttccatgagacaaagcaattccgatggtgctctggtagtttctagctatatccattcctacgcttttagccctctggctctaattttctccttgtcaaactctttcttattttgatgttaagactgtaaaactttatttcatgttccttaagataaacatgttgtattgttgttgttggcatgagttacttacttccatttgacctttcaattgacatctgatccctgcacttttcaaaggatactatggcacggagacctgctgatcctgaagaagaacttagatggatgtcccatgaagttcgtggttatgttgaggctgttttgaatagtctggcagcaaatgtcccaaaggtttacattAaaaaaaagctagcattgctcatttcattggaccctgtcattgtggcaatgttcttattgttttttccccttctcttatcaggctattgtgttgtgccaagtggagaaggcaaaggaagatatgctaaaccagctatatagttcaataaggttgatgaatacttctcttatcttctggaggctataatactgtttctagctttttgcattttttccccacctgacagtttcagattctttgtgctgcaatagtgtcatcatgagccatctggatcaaaagggtgccatgggaatcctgtagatctattttctatgcatatgattttgatcttgctatttagtaatccctatagtgtgtataaacctcagaatcattctggcatattatcttttttctggttacatgaaaaagaaatattggcaccagaagaatgttgtcataccactttgttgtattctttgggagggattttagttattttagttctaactgattgtcaaaaatacagtttcgtgggacaggtgttgggatccacatgttattccagcacttcgttgttcattgatgctatttgcagtttgtttattcttagcttatattatagacttgcttaaatggtacacctaagctatttatactatatgctgtttttaatgccattattatctaatcttaattcctttgctttttttgtcattaccagtgggcaaagcaatgcaaaaattgaagagcttctgcaagaggaccataatgctaaacgtagaagggaaaaataccaaaaacaatcatctctcttgtcaaagcttacccgtcaacttagtgtccatgacaacagggctgcttcttatgccaatgatatctctgaagctggtaagcttactatactttcaatgcctgagaagtaatagcaaatacaattgtatggtattttacatctcctttgtaactagttgttaatgttgttcattacctgtcattgatatagttacccagctgaccattcaccccttttataactcatatttctacatgttgaatcatagggtgactaatgtagattgcatgttacttttcttctgttaatttgtcacaaatttcttaaacggaatcatttgcagagagcccccggacacccaaccgcccaggtgaggattggaggtctgccttcgattccgcatccaacggacccagctcaggcagcgaatcaaggtcaagaagcgctgatggacgcagagggcgctatgaaaacggcgacgtgacctccggtgccaactccggcagccgacgcactccaaaccggttacctccagcacctcctaaatactaatcacgctgattagtatatatccatgaacgagcgccgtgatgtattcttgctaggcaccacgccctgtttctgattgatattggtggctggggtgagcggatttgggggatttggactatagagagagaagcgtcttgttagtggagagattgcatgaacaatttgtaagcagggtaccctgagttgtttatagaaatataaataggtaatccatccattatctctattgtttcgtcatctttttttgactcattcatgtctgattaatccccctgcttataggattttgtgggacgatcagtctagctttgtactatatcatactgtatacttatatatcattgtacgcgtacacttcgaaacggt
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| CDS seq | atggaggccgtcgaggagctcgcgcagctgtcggaggcgatgcgccaggcggcgtcgctgctggccgacgacgacccctccgacgactccgccccacgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcggggcgggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctgccgacgggggagaacggggcgacgagggcgccaattgtggtggacctgcagagggacccgggcctcagcagcaagtccatcgtgctgcaaatcgacagcaagtcgcagcaggtgtccgcaagttcgctgcggcattcgctgcaggacaggctcagcaagggggcgtccagcggatccagtaggggccgtgtagaggggatcaatctcaagctgcggacgagtacagctcccccactaaagctggttgatttacctgggatagaccagcgagctgttgacgattcaatgattaatgaatatgctgggcacaatgatgcaatactgctagttgtgatacctgcaatgcaagcagctgatgttgcgtcatctcgagctcttaggctggccaaggatattgatgcagatggcaccagaactgtaggtgtgataagtaaagttgatcaagcagaaggagatgcaaaaactatagcttgtgttcaggcccttctgtcgaataagggcccaaaaaaccttccagatatcgagtgggttgctctgataggacaatcagttgcaattgcgtcagctcaagcagcaggttctgaaaactcactagaaacagcatggaatgctgaagctgaaaccctcagatccatcttaactggagctccaaaaagtaaactaggtagaatagctctggttgacaccattgctaagcagatacgtaaacggatgaaaatggttcaagatgaactggcacggctgggagaatctatggtacaaagtgctgaagggactcgggctgttgctttggaactctgccgggaattcgaggataagtttcttgctcatattacatctggcgaggggtctggttggaaagttgttgcaagttttgaagggaaattcccagagagaattaaacagctgccactggacaggcactttgacctcagcaatgttaaaaggattgtcttggaagccgatggttatcaaccgtacctgatatctccagagaaagggttgaggtccttgataaagatagtattggatatggcaaaggagccatcacgactctgtgttgaagaggtacatcgtgtattgttagacattgtcaatgcttcagcaaatgccacaccaggacttggaagatatcctccattcaagcgcgaggtcattgcaatagcatcaaatgcactagacagcttcaaaaatgatgcaaaaaagatggttgttgcacttgttgatatggagcgcgcctttgttcctcctcagcatttcatccgtctagtgcaaagaagaatggaaaggcaacgccgtgaggatgaattaaaaaatcgatcctccaagaaaccacaggatgctgaccaacccatgggaaaaagggcctccagtccccagacaggatctgagaaagacacaaaagacaaatcagcgaaagacaaagacaaagacaaatcaggccagcaagacaaagacgcaaaagaggggtcctctgtgcaggttgctggttcttctggtgaaattactgcaggttaccttttgaagaaaagtgcaaaaacaaatggatggagtaggaggtggtttgtcctcaatgagaaaagcggaaagcttggctacacgaagaaacaagaggagagacattttcgtggtgtcatcactcttgaggagtgtaaccttgaagaagtagaggaggaagaacctcctaaaagtttgaaggattcaaaaaaggcaaatgggccagagaaaggcccaagtctcgtctttaagataactaacagggttgcctacaaaacagttctaaaagctcatagtgctgttgtattgaaagctgagagcacggccgacaaagttgagtgggtaaataagatacgggctgtaattcaaagcaaagggggatcattcaagggtccaaatactgatggtggttccatgagacaaagcaattccgatggtgctctggatactatggcacggagacctgctgatcctgaagaagaacttagatggatgtcccatgaagttcgtggttatgttgaggctgttttgaatagtctggcagcaaatgtcccaaaggctattgtgttgtgccaagtggagaaggcaaaggaagatatgctaaaccagctatatagttcaataagtgggcaaagcaatgcaaaaattgaagagcttctgcaagaggaccataatgctaaacgtagaagggaaaaataccaaaaacaatcatctctcttgtcaaagcttacccgtcaacttagtgtccatgacaacagggctgcttcttatgccaatgatatctctgaagctggcagcgaatcaaggtcaagaagcgctgatggacgcagagggcgctatgaaaacggcgacgtgacctccggtgccaactccggcagccgacgcactccaaaccggttacctccagcacctcctaaatactaa
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| Protein seq | MEAVEELAQLSEAMRQAASLLADDDPSDDSAPRRPSTFLNAVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQRDPGLSSKSIVLQIDSKSQQVSASSLRHSLQDRLSKGASSGSSRGRVEGINLKLRTSTAPPLKLVDLPGIDQRAVDDSMINEYAGHNDAILLVVIPAMQAADVASSRALRLAKDIDADGTRTVGVISKVDQAEGDAKTIACVQALLSNKGPKNLPDIEWVALIGQSVAIASAQAAGSENSLETAWNAEAETLRSILTGAPKSKLGRIALVDTIAKQIRKRMKMVQDELARLGESMVQSAEGTRAVALELCREFEDKFLAHITSGEGSGWKVVASFEGKFPERIKQLPLDRHFDLSNVKRIVLEADGYQPYLISPEKGLRSLIKIVLDMAKEPSRLCVEEVHRVLLDIVNASANATPGLGRYPPFKREVIAIASNALDSFKNDAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKNRSSKKPQDADQPMGKRASSPQTGSEKDTKDKSAKDKDKDKSGQQDKDAKEGSSVQVAGSSGEITAGYLLKKSAKTNGWSRRWFVLNEKSGKLGYTKKQEERHFRGVITLEECNLEEVEEEEPPKSLKDSKKANGPEKGPSLVFKITNRVAYKTVLKAHSAVVLKAESTADKVEWVNKIRAVIQSKGGSFKGPNTDGGSMRQSNSDGALDTMARRPADPEEELRWMSHEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSVHDNRAASYANDISEAGSESRSRSADGRRGRYENGDVTSGANSGSRRTPNRLPPAPPKY |
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| Function | Dynamin-2B [UniProtKB/Swiss-Prot:Q9LQ55] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0009850 | OsLima_06g0009850.01 | Chr06 | 7888899 | 7896800 | + | NAM | ||
| CDS seq | atggaggccgtcgaggagctcgcgcagctgtcggaggcgatgcgccaggcggcgtcgctgctggccgacgacgacccctccgacgactccgccccacgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcggggcgggcaagtcggccgtgctgaacagcctcatcggccaccccgtgctgccgacgggggagaacggggcgacgagggcgccaattgtggtggacctgcagagggacccgggcctcagcagcaagtccatcgtgctgcaaatcgacagcaagtcgcagcaggtgtccgcaagttcgctgcggcattcgctgcaggacaggctcagcaagggggcgtccagcggatccagtaggggccgtgtagaggggatcaatctcaagctgcggacgagtacagctcccccactaaagctggttgatttacctgggatagaccagcgagctgttgacgattcaatgattaatgaatatgctgggcacaatgatgcaatactgctagttgtgatacctgcaatgcaagcagctgatgttgcgtcatctcgagctcttaggctggccaaggatattgatgcagatggcaccagaactgtaggtgtgataagtaaagttgatcaagcagaaggagatgcaaaaactatagcttgtgttcaggcccttctgtcgaataagggcccaaaaaaccttccagatatcgagtgggttgctctgataggacaatcagttgcaattgcgtcagctcaagcagcaggttctgaaaactcactagaaacagcatggaatgctgaagctgaaaccctcagatccatcttaactggagctccaaaaagtaaactaggtagaatagctctggttgacaccattgctaagcagatacgtaaacggatgaaaatggttcaagatgaactggcacggctgggagaatctatggtacaaagtgctgaagggactcgggctgttgctttggaactctgccgggaattcgaggataagtttcttgctcatattacatctggcgaggggtctggttggaaagttgttgcaagttttgaagggaaattcccagagagaattaaacagctgccactggacaggcactttgacctcagcaatgttaaaaggattgtcttggaagccgatggttatcaaccgtacctgatatctccagagaaagggttgaggtccttgataaagatagtattggatatggcaaaggagccatcacgactctgtgttgaagaggtacatcgtgtattgttagacattgtcaatgcttcagcaaatgccacaccaggacttggaagatatcctccattcaagcgcgaggtcattgcaatagcatcaaatgcactagacagcttcaaaaatgatgcaaaaaagatggttgttgcacttgttgatatggagcgcgcctttgttcctcctcagcatttcatccgtctagtgcaaagaagaatggaaaggcaacgccgtgaggatgaattaaaaaatcgatcctccaagaaaccacaggatgctgaccaacccatgggaaaaagggcctccagtccccagacaggatctgagaaagacacaaaagacaaatcagcgaaagacaaagacaaagacaaatcaggccagcaagacaaagacgcaaaagaggggtcctctgtgcaggttgctggttcttctggtgaaattactgcaggttaccttttgaagaaaagtgcaaaaacaaatggatggagtaggaggtggtttgtcctcaatgagaaaagcggaaagcttggctacacgaagaaacaagaggagagacattttcgtggtgtcatcactcttgaggagtgtaaccttgaagaagtagaggaggaagaacctcctaaaagtttgaaggattcaaaaaaggcaaatgggccagagaaaggcccaagtctcgtctttaagataactaacagggttgcctacaaaacagttctaaaagctcatagtgctgttgtattgaaagctgagagcacggccgacaaagttgagtgggtaaataagatacgggctgtaattcaaagcaaagggggatcattcaagggtccaaatactgatggtggttccatgagacaaagcaattccgatggtgctctggatactatggcacggagacctgctgatcctgaagaagaacttagatggatgtcccatgaagttcgtggttatgttgaggctgttttgaatagtctggcagcaaatgtcccaaaggctattgtgttgtgccaagtggagaaggcaaaggaagatatgctaaaccagctatatagttcaataagtgggcaaagcaatgcaaaaattgaagagcttctgcaagaggaccataatgctaaacgtagaagggaaaaataccaaaaacaatcatctctcttgtcaaagcttacccgtcaacttagtgtccatgacaacagggctgcttcttatgccaatgatatctctgaagctggcagcgaatcaaggtcaagaagcgctgatggacgcagagggcgctatgaaaacggcgacgtgacctccggtgccaactccggcagccgacgcactccaaaccggttacctccagcacctcctaaatactaa
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| Protein seq | MEAVEELAQLSEAMRQAASLLADDDPSDDSAPRRPSTFLNAVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQRDPGLSSKSIVLQIDSKSQQVSASSLRHSLQDRLSKGASSGSSRGRVEGINLKLRTSTAPPLKLVDLPGIDQRAVDDSMINEYAGHNDAILLVVIPAMQAADVASSRALRLAKDIDADGTRTVGVISKVDQAEGDAKTIACVQALLSNKGPKNLPDIEWVALIGQSVAIASAQAAGSENSLETAWNAEAETLRSILTGAPKSKLGRIALVDTIAKQIRKRMKMVQDELARLGESMVQSAEGTRAVALELCREFEDKFLAHITSGEGSGWKVVASFEGKFPERIKQLPLDRHFDLSNVKRIVLEADGYQPYLISPEKGLRSLIKIVLDMAKEPSRLCVEEVHRVLLDIVNASANATPGLGRYPPFKREVIAIASNALDSFKNDAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDELKNRSSKKPQDADQPMGKRASSPQTGSEKDTKDKSAKDKDKDKSGQQDKDAKEGSSVQVAGSSGEITAGYLLKKSAKTNGWSRRWFVLNEKSGKLGYTKKQEERHFRGVITLEECNLEEVEEEEPPKSLKDSKKANGPEKGPSLVFKITNRVAYKTVLKAHSAVVLKAESTADKVEWVNKIRAVIQSKGGSFKGPNTDGGSMRQSNSDGALDTMARRPADPEEELRWMSHEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSSISGQSNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSVHDNRAASYANDISEAGSESRSRSADGRRGRYENGDVTSGANSGSRRTPNRLPPAPPKY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0009850 | OsLima_06g0009850.02 | Chr06 | 7892976 | 7897166 | + | IsoSeq | ||
| CDS seq | atgctgaccaacccatgggaaaaagggcctccagtccccagacaggatctgagaaagacacaaaagacaaatcagcgaaagacaaagacaaagacaaatcaggccagcaagacaaagacgcaaaagaggggtcctctgtgcaggttgctggttcttctggtgaaattactgcaggttacc |
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| Protein seq | MLTNPWEKGPPVPRQDLRKTQKTNQRKTKTKTNQASKTKTQKRGPLCRLLVLLVKLLQVT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr06 | 7896343 | 7896670 | + | OsLima_06g0009850.02 | OsLima_06g0009850.01,OsLima_06g0009850.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.407057 | 1.383744 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0247800 | RBH | 6.414512 | 5.195527 | 15.869887 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g13820 | RBH | 4.222841 | 3.208918 | 3.992475 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0247800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0009840 | RBH | 1.743348 | 29.584913 | 21.728407 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0009740 | RBH | 0.843312 | 10.329166 | 9.971623 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0009730 | RBH | 4.623206 | 35.596676 | 48.792763 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0009730 | RBH | 0.569770 | 1.066242 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0009830 | RBH | 18.677061 | 47.374500 | 51.603134 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0127300 | RBH | 27.7166175 | 60.202261 | 99.8335415 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0009390 | RBH | 0.963785 | 2.320555 | 3.829710 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0130200 | RBH | 30.6269465 | 65.751602 | 56.317938 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0032780 | RBH | 0.258336 | 0.557466 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0009660 | RBH | 1.424868 | 35.268066 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0009710 | RBH | 17.200626 | 88.121910 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0030230 | RBH | 2.486184 | 0.0 | 5.228936 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0009620 | RBH | 1.372782 | 35.260555 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G009560 | RBH | 2.028663 | 14.203327 | 9.762374 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0009830 | RBH | 3.028127 | 74.362144 | 23.411182 |
