Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0032780 | OGI:02087640 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:32800536-32810216 | ||||||||
| Gene Symbol | BC3, bc3, bc-3, OsDRP2B, DRP2B | ||||||||||
| DNA seq | atctcgacaatgggccttcattttggtaagaaatggcgcactatgtggtcacacgaacacaagggttaccatgtagtacatttttcccgtggttcttcaaaggaagccagtcatcaaagaattgcacagtataaacacatattagtgatccggtgtgccccacaaataaagaatgactcgtgttaaaaagaatggaagaaataatacattgccaagttgatggaagaattacaacagcagagtacaagaccaagatcaaccgatctgtggtaacaaaatcccacacccacaggctgagcgagcctcagacagatcaatatgccaaaatgatcgtgaaacaactgtagatAaactataggagtatatttctatgaacaactgagatcctctggatacacaccattcatgcaaatctctcgtcagctctattcttcgagcccatgcatgccatccccctgaatcaaatggttctcgatgcatcaattccgttgtacttcatacctagcatgaaaatatgatgttggcggatgatgatcaacatgcttaatatttttgccctggaggtgctggtggcaaacggtttggtgtgcgtcggctgccagagttaccaccattcacgtccccattttcatagcgtttgccacggctgtcagcacttcttgaccttgtttcattgtgtgaactggatcgatcaacagagccatttgatgcagaatcgaacgcagacctccagtcctcacctgactggccagaggtccgtgggctactctctgcaaatgatttgttttgtttagtcagggttaagtgcttgatatttcctaccaggtagccaaagaaatatgaacgaaaatacaaaatcattcaccattatatctacgcagtctcaatccatatacagagtcacagatagtagacacttctagaatatgcaggaaaatttaaatgtgaacagcaagtgttctgtcttgctcagttgttattagctagatatcagctaggtcatttatcttgttcagttatcgtcatttctgttaaaatttacaaatcatggttgcagacttgtgccattaaaatttccaataattgcaaagcccaaactatgccaagaatagctggcaaacatgggccatgaatataaaccagattaccaagatgatgttgttacccatgaacctaggccagcattaccctcttatgttttggcaaaatgatgcatgcaatgtcatcatcgacccaaccttaatggcaacagaatagttagataaaaccctcacctagtatgagaacctatcatattgcagtattcaggcttgtttgtgaactaatgagatctgaagttttgaagctgatagtcatgatcatgcaaaacatcaagatgcgtgctaatacccttagcatactatctctaaatttcaaattttgatcttccaaacgaaattgattatgatattgagatatcgaaatttaggttgtataatatagtatcatttcccttgcatatgattttgagcaaatttgtacacaatttgtttggtgatggtttcagtgattgcactaaattggtggtgttctacttaatacttccctagatgaagaggcagcaaagcaaacttgctaagttttagttatcttaattttcatgctaagttgtcatcacacaaattctgctaaagttgaaccatcatatgtactcgtgctgtcctgaagtgcttgttcatgtggcagaacaattatggtcatgatcagatgagttgtaattcaacaaggtttcaaacatggccatcgtagtaaattccattggcttgcagaaaatatactaggaaaactcaatattatgatgggaaaacaaccaattaaagttcagaagaaaagaaaacacacctacaaaagaaatggacaaatttgcaagcacacaaaactattgcatttgctactatcaactaagtatttgaaatgtagccaacttaccagctccagaactatcattggtatacgatgcaacagaagctctattgtcatggatactaagctgacgagtaagctttgacaatagagatgattgtttttggtacttctcccgtctacgtttagcattgtggtcctcttggagaagttcttcaatctttgcattggtttgagcactaatgatgagagttgtaacaagattagcagcaagttacaaaaggaacggaatgactatgaaataaacacttaacatgtatgtggagcgtgtaacagttttattttttcaggtgtgctttacttaatggaatttctaccatttagtgcaccatatgtcatgtatctacttgtgatatgccatgtgaaggaatgtcatgaatagaaatAaaaataataaataaaatatgagttatgcgaacaatgttcagtagcgcctgcagacattgcagtaagtcctttaagttgaaaaaggaaaactaagggtatatccatttagtgaaatatctgcaggtgctcaccaaagtctttgtgttggcagttttctcttgttaacaactgatccaagtgttaacagtggcgtgttaacaagagaaaactgagttgaaaaggaaaaaaaaaagacaatatctatacttaaggtcaatgcagttccatctaggggtatgtccatttagtggagaaaaagaaagaagcgaaaccttatgcaatgcacaaatacaaagaaagaatacgcatcaaaccttattttgctgtagagctgatttagcatatcttcctttgctttctccacttggcaaagtacgattgcctgatcatgaaaaagacaataataacaattgcaactatgaccatgttaaattgagtttAaaaaatagtatgactgttgaaacaattgtgaggttcaaatgtaaacctttggaacatttgctgccaaactgttcaaaacagcctctacataaccacgaacttcttgagacatccaccgaagttcttcttcaggatcagcaggcttccgggccatcgtatccttaagggagagtaattgtgtcacaggcaattcaaaatttgtgtttgacacattcaaaaaataatcatggccgtgggaaagtggaacaggttgatatgagtgttcagttaagatagttgcacaaaacaagtggctttaatttcttagagaaattcaaatgataaacatggtcactggtaaagtagaaaacttgccacaagcatccactgaagagagggtaaaaatagcttaggcaataactcagaattgtagatgttaaaagctttacaatgacaatagcataaaaaatgtcaaataaggaacatacaaggGAcccatcagaatggctttgcctcatggaaccaccctcaggagtatttaaacccttcacagaaccccctttgctttgaatgacacctcttatcttcttcatccattcaaccttgtcagcaatagtctcggCcttcagtataacagcactatgagctgcaacatgaaattcacactttaagcaacataattagcatttaaaacctcagcatataacgtttagagacactaacatttcagcacagttttgtaggcaactctgttagtaatcttaaatacaagacttgggcctttctctgccccattggccttctttgaatccttcaaactcttggaaagctcttcctcttctatctcttccagattacattcctgaatcacgcagcaaattgtgttattaagttcatatctcatctctcatagttgtgcacacaacTtttttagtttgaatcatcgaatgtgaactggaaccacaaggactgtaaaattacaagtctaaggtgtaaactaaagtatcgtagatcactgttgagcatgaacacagaagtataaaaagttaagtgcacacctccaggacaataacacctcgaaaatgtctctcctcttgtttcttggtgtacccaagctggacatgAaaaaaaaaaacagtaaatgacaccaaattcttaaataaataaaggacatttgaaaatcggcagcaaatgacaagattatcataagttattattcagaaaaatcaaatatggggaacaccagtacatcagtgtacgagatatattaacctttccactcttctcatttaggacaaaccatcttttgctccattcattattttttgcacttttcttcaaaaggtagcctgagtagaaaagaagaaatcatcttatatgcaaaaaagccaaaccaggatacagaattaaccaaaaccatctgcagttacttgtaactacaaatgaaagattacactagctgtgaagagccagagtaaataaaaaaaaactacaggaatgataacctatggtgcatcagcgcatcattatacctgcagttatttcaccaccaggcccagcaacctgcaaatttggtccctcttttgcatctttatctttgtcttgctgactgaatttttctttcaacgatttcaaggcaccaccagattgctcagatcctgtgcctgagccctaatacagaaggcaaccaatgttcagggccaaacaaacgcaagaaaaaggaatcttgcagtcattacttttagcatgacctttcagtaagcacatttgtgcaaggtgcaagaggcagaaatcataccttgttggactgttctgcatcttgggctttcttagatgacctgtttttcacctcatcctcacgacgttgcctttccattctgcaatgtcatatcaaaccaaatataaggattgaacaatgctattataaatcatgaaaacatcgtaaaggtctttcagctcatagacagacactagtatggaaacattatccacttcaactaagggatgaaactatatttctctaacaaagaagttgtaatgaagtggtatacttcgtgggcacatcactctgtacagaaaatatgccggccttttttccatttggatttaggcagttgatgctatttctataagactacaagtcaatgttattcttccctatcagcttttgtggtggaaattatttactgaagttacattagagcagattgaaaccaaaccaactgtaaagttattcaattaagagcctgacataccttctttgtactaaacggatgaagtgttgtggtgggacaaaggcacgctccatatcaacaagtgcaactaccatcttttttgcatcacttttgaagacatccaatgcattggttgcaatttcaacgaccttcagaaaagagatgatgggatgttgtgctcaggaagcaggtgaaagggaagtagaatgcattgtaagttggtgaaatagaacaaagtggtacctcgcgtttgaatggaggatatcttccaagtcctggtgtagcatttgcagaagcatttactatgtccaataatacacggtgtacctagtatattgacaaaatgtatttagtttacatattgacactacactggcaagcatagttattagaagcagaccggaccggcggttcacccggaataaaccggaaccaacactcttagcggcctggttcgattaaaagaccagtgcacaatcggaccggtaaacacctgatcaaactgaacggttctctatcttttgggtcggctataaaccggtgactgcccacgtgggcctgtcaagtggagtggactcgtcagccatgcatgcgagtaacacaaaaattgagggaaaaaagggtgaagactgggattcgaacccgtgaccaagctacaacaccaaaaatattccaccgttGggctatgacagctgttgtgattatagtgcagcatatgtctatttAaaccggatcaaagcggcggtctaaccggttagaccagtaaaccactgaaccgagCccatcagatgttcaattatcgatctggtcttaataactatgctggcaagtgcctacccatgcacagtaacaaaatgattaattaatgcatcataaacttcattggaagttacaaagtttaaaattagaaggataaatatagccaccaaaatccacttctgacattcatccaaagggtaaaaatgaaattgcatctcaactattcatattttacctttttaagtgggttagtaaattatacatataggggatcaaaaaagacatacctcttcaacacacagccgtgatggctcctttgccatttcaagtactccttttattaaggattttaaacctttctctggagatatcaaatatggttgataaccatcggcttccaggacaatctagaatataaagataacagtaatcatcataagcaaagtgtgcccactctaaaattaattctagaagggcttttgaatttacccttttgacattgttaatatcaaaatgcctgtccaaaggaagctgtttgatcctatctggaaacttcccctcaaagcttgcaacaattttccaaccagaCcccttttgattgaataacagccttgtaatcaggtatttcatttggcacatactaattaaggtatatataaagaccatacttgagcttatcactaacctcaccagaagtaacatgggcaagaaacttgtcttcgaattcacggcaaagctccaaagcaacagccctggttccttcagcgcttgataccatctgttctcccaaccttgcaagttcattttgcactatctgagacttcccctgaagcctgcaattgtagcaaggtacatatatcagcaatttaacaagaaattaaaatcaacttattttacagaaggccagagtgtccatgatccattgtgtgatgataacattacatcgatagatcaaataagggtcatttatgccgcggaaaagttcatgaactacataaatttaaatttggagtttaaaaggtagtttaagcttgacattttgtagccaagtagaaactgttcacacatcttttatacttggcatttctcttgtcatggatgcatgtgtgttgtaagtatgtagttgcagatgcaaaaagattggccaaatgcacagaagttcagaagaaatgagtagataaccatgtttgacatcatctaaatgtaccaagctaggtcaaataggaaattggagcttggaagtgctgacaaaaaaacaacttgattccacaggtgcataaacacaagagaaggtacaagctCcaataatggtactgcggaggggatatctagatacatgaaatatgattgcgacatagaacctggacaatttgtgctacatgcatattgtttacttttaactacaacgatactgtagaagggaaatcttagtgaaatgaaatgtgaaagatgttttgacatccaaattccatgtgaaagatgttttgacatccaaattccaagaccatctaagtttcagttttcttaaaagttggggttgtgcttagtttactttaaaaataaaataaagttcaattatttaggaaaataaaaataataaaaaagggcaatgcacttacccggacaaaaggttaggtagccgaattttcatccttttacgtatctgcttagcaatggtatccacgagagcaattctccctagcttacttcgaggagctccagttaggatggatttgagtgtctctgcttcagcctgccaggcagtttccagtgagttctcagaaccaactgatccagcttgggccgatgcaattgagacagattgccctattagagcaacccactcaatttcagctgctgctcgtggtgcacccttgttagacaagatagcctgaacacaagatacagtttttgcatctgcagatgcttgatcaattttacttaaaacacctattgttctggttcctacaacaagatgaacaaggataaacatcagtttctacttgctacggagagaatggtatgcattgcctattgggcaggattataagaattttataacagaccatctggatcaatatccttcgctagtctgagagctcgagatgatgcaacatcagcagcttgcattgctggtatcacaacaatcaatattgcatcattatgtccagcatattcactgatctgaaatgtggagaaaagtcaatatccaacacttgtgagaagatgcaacaaacatggttcagatacttaagatattcgtgctcttttatgtaataagtgcaagcaactaatatatccatggagggcattcaatgcttctcagtcaaagtgcatgcacaatgtcattactatgatgcttccaaccttttctaaagggaatattttccaccaatacattgattagataataagtttatccaattcataaacacattcatatgttagttatgaggactctggattattctacatgcggttcaatcatcgttgtgtaattgagcaagaaactgcaaatactcacagttgaatcatccataactcgttggtctatgccaggcaaatcgaccaattttattggaggagctggaaaaaaacaaaagatgctgaagtgagaattcattaccaatataaacttgtgagcctaacggccaaggctagagatgtaaaccatttccatcatctaaaaattaccaatataaacaaagggaagcaaacagaagaaattattgtacatgtagcagtacaatatccaaaattgtgcttattctaagtatggtactcaatcgttgtagtgttgcaaaaacctgagagcacattctaacaactgtatcagaagacactcttgataccgtttttctacaaccacttattgtcttaccatttcagctttctataacacataaaatacacaaggcatcaatgtccgacaattacaggggcagtatgggcagtggcgcaaacattagcacgactcagcacatggcacatgctcactatacatctggcttaccaacattgtgcaatgtaagagtaaaagtgaagcccagcaacaaacctgtacttgtccgcagcttgaggtaaatctcatcgtttcggcctttccctgatccaccggacgCccccttgctcagcctgtcctgcagcgaatggcggagagcacctgcacgccacaacgccaccagaaagggccaccaaactcagcacaccaaccagccggcgcccattgccagatccagctagccaagggaagatctcactcacttgccgacacctgctgcgacttgctgtcgatctgcaggacgatggatttgctgctcagccccggatccccctgcaggtcgaccactatcggcgcccgcgtcgccccgttctcacccgtcggctgcatcaccacacagcaaccaccacccaaagcttcacaaaaaccgaatgccacaaaagcagaagagagagaagcgagctaaacccgaagcacactcaccagcacggggtggccgatgaggctgttgagcacggccgacttgccggcgccctgcacggaacaacaacatgccggatcgagtcagatcgggcggaggagagagggggagctgccgcgggcggcggcggcggcggctccggtggaagcaaaacacttacgacgttgccgagcgcgacggcgttgaggaaggtggaggggcggcgcgggctggcctcgtcggaggggtcgtcgtcggccaggagggaggcggcctggcgcatggactcggcgagctggacgagctcgtccatggcctccatggccgacgacgacatgggcgctgggatctcgaggctggtcgggggtgggagagatctcggggggcgtggtggcgtctggtgtgatgtgatgtggttG
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| CDS seq | atgtcgtcgtcggccatggaggccatggacgagctcgtccagctcgccgagtccatgcgccaggccgcctccctcctggccgacgacgacccctccgacgaggccagcccgcgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcggcgccggcaagtcggccgtgctcaacagcctcatcggccaccccgtgctgccgacgggtgagaacggggcgacgcgggcgccgatagtggtcgacctgcagggggatccggggctgagcagcaaatccatcgtcctgcagatcgacagcaagtcgcagcaggtgtcggcaagtgctctccgccattcgctgcaggacaggctgagcaaggggGcgtccggtggatcagggaaaggccgaaacgatgagatttacctcaagctgcggacaagtacaggtttgttgctgggcttcacttttactcttacattgcacaatgttgctcctccaataaaattggtcgatttgcctggcatagaccaacgagttatggatgattcaactatcagtgaatatgctggacataatgatgcaatattgattgttgtgataccagcaatgcaagctgctgatgttgcatcatctcgagctctcagactagcgaaggatattgatccagatggaaccagaacaataggtgttttaagtaaaattgatcaagcatctgcagatgcaaaaactgtatcttgtgttcaggctatcttgtctaacaagggtgcaccacgagcagcagctgaaattgagtgggttgctctaatagggcaatctgtctcaattgcatcggcccaagctggatcagttggttctgagaactcactggaaactgcctggcaggctgaagcagagacactcaaatccatcctaactggagctcctcgaagtaagctagggagaattgctctcgtggataccattgctaagcagatacgtaaaaggatgaaaattcggctacctaaccttttgtccgggcttcaggggaagtctcagatagtgcaaaatgaacttgcaaggttgggagaacagatggtatcaagcgctgaaggaaccagggctgttgctttggagctttgccgtgaattcgaagacaagtttcttgcccatgttacttctggtgagggGtctggttggaaaattgttgcaagctttgaggggaagtttccagataggatcaaacagcttcctttggacaggcattttgatattaacaatgtcaaaaggattgtcctggaagccgatggttatcaaccatatttgatatctccagagaaaggtttaaaatccttaataaaaggagtacttgaaatggcaaaggagccatcacggctgtgtgttgaagaggtacaccgtgtattattggacatagtaaatgcttctgcaaatgctacaccaggacttggaagatatcctccattcaaacgcgaggtcgttgaaattgcaaccaatgcattggatgtcttcaaaagtgatgcaaaaaagatggtagttgcacttgttgatatggagcgtgcctttgtcccaccacaacacttcatccgtttagtacaaagaagaatggaaaggcaacgtcgtgaggatgaggtgaaaaacaggtcatctaagaaagcccaagatgcagaacagtccaacaagggctcaggcacaggatctgagcaatctggtggtgccttgaaatcgttgaaagaaaaattcagtcagcaagacaaagataaagatgcaaaagagggaccaaatttgcaggttgctgggcctggtggtgaaataactgcaggctaccttttgaagaaaagtgcaaaaaataatgaatggagcaaaagatggtttgtcctaaatgagaagagtggaaagcttgggtacaccaagaaacaagaggagagacattttcgaggtgttattgtcctggaggaatgtaatctggaagagatagaagaggaagagctttccaagagtttgaaggattcaaagaaggccaatggggcagagaaaggcccaagtcttgtatttaagattactaacagagttgcctacaaaactgtgctgaaatctcatagtgctgttatactgaagGccgagactattgctgacaaggttgaatggatgaagaagataagaggtgtcattcaaagcaaagggggttctgtgaagggtttaaatactcctgagggtggttccatgaggcaaagccattctgatgggTCccttgatacgatggcccggaagcctgctgatcctgaagaagaacttcggtggatgtctcaagaagttcgtggttatgtagaggctgttttgaacagtttggcagcaaatgttccaaaggcaatcgtactttgccaagtggagaaagcaaaggaagatatgctaaatcagctctacagcaaaataagtgctcaaaccaatgcaaagattgaagaacttctccaagaggaccacaatgctaaacgtagacgggagaagtaccaaaaacaatcatctctattgtcaaagcttactcgtcagcttagtatccatgacaatagagcttctgttgcatcgtataccaatgatagttctggagctgagagtagcccacggacctctggccagtcaggtgaggactggaggtctgcgttcgattctgcatcaaatggctctgttgatcgatccagttcacacaatgaaacaaggtcaagaagtgctgacagccgtggcaaacgctatgaaaatggggacgtgaatggtggtaactctggcagccgacgcacaccaaaccgtttgccaccagcacctccagggcaaaaatattaa
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| Protein seq | MSSSAMEAMDELVQLAESMRQAASLLADDDPSDEASPRRPSTFLNAVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQGDPGLSSKSIVLQIDSKSQQVSASALRHSLQDRLSKGASGGSGKGRNDEIYLKLRTSTGLLLGFTFTLTLHNVAPPIKLVDLPGIDQRVMDDSTISEYAGHNDAILIVVIPAMQAADVASSRALRLAKDIDPDGTRTIGVLSKIDQASADAKTVSCVQAILSNKGAPRAAAEIEWVALIGQSVSIASAQAGSVGSENSLETAWQAEAETLKSILTGAPRSKLGRIALVDTIAKQIRKRMKIRLPNLLSGLQGKSQIVQNELARLGEQMVSSAEGTRAVALELCREFEDKFLAHVTSGEGSGWKIVASFEGKFPDRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLKSLIKGVLEMAKEPSRLCVEEVHRVLLDIVNASANATPGLGRYPPFKREVVEIATNALDVFKSDAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDEVKNRSSKKAQDAEQSNKGSGTGSEQSGGALKSLKEKFSQQDKDKDAKEGPNLQVAGPGGEITAGYLLKKSAKNNEWSKRWFVLNEKSGKLGYTKKQEERHFRGVIVLEECNLEEIEEEELSKSLKDSKKANGAEKGPSLVFKITNRVAYKTVLKSHSAVILKAETIADKVEWMKKIRGVIQSKGGSVKGLNTPEGGSMRQSHSDGSLDTMARKPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSKISAQTNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRASVASYTNDSSGAESSPRTSGQSGEDWRSAFDSASNGSVDRSSSHNETRSRSADSRGKRYENGDVNGGNSGSRRTPNRLPPAPPGQKY |
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| Function | Dynamin-2B [UniProtKB/Swiss-Prot:Q9LQ55] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0032780 | OsLima_02g0032780.02 | Chr02 | 32800703 | 32810216 | - | NAM | ||
| CDS seq | atgtcgtcgtcggccatggaggccatggacgagctcgtccagctcgccgagtccatgcgccaggccgcctccctcctggccgacgacgacccctccgacgaggccagcccgcgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcggcgccggcaagtcggccgtgctcaacagcctcatcggccaccccgtgctgccgacgggtgagaacggggcgacgcgggcgccgatagtggtcgacctgcagggggatccggggctgagcagcaaatccatcgtcctgcagatcgacagcaagtcgcagcaggtgtcggcaagtgctctccgccattcgctgcaggacaggctgagcaaggggGcgtccggtggatcagggaaaggccgaaacgatgagatttacctcaagctgcggacaagtacaggtttgttgctgggcttcacttttactcttacattgcacaatgttgctcctccaataaaattggtcgatttgcctggcatagaccaacgagttatggatgattcaactatcagtgaatatgctggacataatgatgcaatattgattgttgtgataccagcaatgcaagctgctgatgttgcatcatctcgagctctcagactagcgaaggatattgatccagatggaaccagaacaataggtgttttaagtaaaattgatcaagcatctgcagatgcaaaaactgtatcttgtgttcaggctatcttgtctaacaagggtgcaccacgagcagcagctgaaattgagtgggttgctctaatagggcaatctgtctcaattgcatcggcccaagctggatcagttggttctgagaactcactggaaactgcctggcaggctgaagcagagacactcaaatccatcctaactggagctcctcgaagtaagctagggagaattgctctcgtggataccattgctaagcagatacgtaaaaggatgaaaattcggctacctaaccttttgtccgggcttcaggggaagtctcagatagtgcaaaatgaacttgcaaggttgggagaacagatggtatcaagcgctgaaggaaccagggctgttgctttggagctttgccgtgaattcgaagacaagtttcttgcccatgttacttctggtgagggGtctggttggaaaattgttgcaagctttgaggggaagtttccagataggatcaaacagcttcctttggacaggcattttgatattaacaatgtcaaaaggattgtcctggaagccgatggttatcaaccatatttgatatctccagagaaaggtttaaaatccttaataaaaggagtacttgaaatggcaaaggagccatcacggctgtgtgttgaagaggtcgttgaaattgcaaccaatgcattggatgtcttcaaaagtgatgcaaaaaagatggtagttgcacttgttgatatggagcgtgcctttgtcccaccacaacacttcatccgtttagtacaaagaagaatggaaaggcaacgtcgtgaggatgaggtgaaaaacaggtcatctaagaaagcccaagatgcagaacagtccaacaagggctcaggcacaggatctgagcaatctggtggtgccttgaaatcgttgaaagaaaaattcagtcagcaagacaaagataaagatgcaaaagagggaccaaatttgcaggttgctgggcctggtggtgaaataactgcaggctaccttttgaagaaaagtgcaaaaaataatgaatggagcaaaagatggtttgtcctaaatgagaagagtggaaagcttgggtacaccaagaaacaagaggagagacattttcgaggtgttattgtcctggaggaatgtaatctggaagagatagaagaggaagagctttccaagagtttgaaggattcaaagaaggccaatggggcagagaaaggcccaagtcttgtatttaagattactaacagagttgcctacaaaactgtgctgaaatctcatagtgctgttatactgaagGccgagactattgctgacaaggttgaatggatgaagaagataagaggtgtcattcaaagcaaagggggttctgtgaagggtttaaatactcctgagggtggttccatgaggcaaagccattctgatgggTCccttgatacgatggcccggaagcctgctgatcctgaagaagaacttcggtggatgtctcaagaagttcgtggttatgtagaggctgttttgaacagtttggcagcaaatgttccaaaggcaatcgtactttgccaagtggagaaagcaaaggaagatatgctaaatcagctctacagcaaaataagtgctcaaaccaatgcaaagattgaagaacttctccaagaggaccacaatgctaaacgtagacgggagaagtaccaaaaacaatcatctctattgtcaaagcttactcgtcagcttagtatccatgacaatagagcttctgttgcatcgtataccaatgatagttctggagctgagagtagcccacggacctctggccagtcaggtgaggactggaggtctgcgttcgattctgcatcaaatggctctgttgatcgatccagttcacacaatgaaacaaggtcaagaagtgctgacagccgtggcaaacgctatgaaaatggggacgtgaatggtggtaactctggcagccgacgcacaccaaaccgtttgccaccagcacctccagggcaaaaatattaa
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| Protein seq | MSSSAMEAMDELVQLAESMRQAASLLADDDPSDEASPRRPSTFLNAVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQGDPGLSSKSIVLQIDSKSQQVSASALRHSLQDRLSKGASGGSGKGRNDEIYLKLRTSTGLLLGFTFTLTLHNVAPPIKLVDLPGIDQRVMDDSTISEYAGHNDAILIVVIPAMQAADVASSRALRLAKDIDPDGTRTIGVLSKIDQASADAKTVSCVQAILSNKGAPRAAAEIEWVALIGQSVSIASAQAGSVGSENSLETAWQAEAETLKSILTGAPRSKLGRIALVDTIAKQIRKRMKIRLPNLLSGLQGKSQIVQNELARLGEQMVSSAEGTRAVALELCREFEDKFLAHVTSGEGSGWKIVASFEGKFPDRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLKSLIKGVLEMAKEPSRLCVEEVVEIATNALDVFKSDAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDEVKNRSSKKAQDAEQSNKGSGTGSEQSGGALKSLKEKFSQQDKDKDAKEGPNLQVAGPGGEITAGYLLKKSAKNNEWSKRWFVLNEKSGKLGYTKKQEERHFRGVIVLEECNLEEIEEEELSKSLKDSKKANGAEKGPSLVFKITNRVAYKTVLKSHSAVILKAETIADKVEWMKKIRGVIQSKGGSVKGLNTPEGGSMRQSHSDGSLDTMARKPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSKISAQTNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRASVASYTNDSSGAESSPRTSGQSGEDWRSAFDSASNGSVDRSSSHNETRSRSADSRGKRYENGDVNGGNSGSRRTPNRLPPAPPGQKY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0032780 | OsLima_02g0032780.01 | Chr02 | 32800536 | 32810216 | - | NAM | ||
| CDS seq | atgtcgtcgtcggccatggaggccatggacgagctcgtccagctcgccgagtccatgcgccaggccgcctccctcctggccgacgacgacccctccgacgaggccagcccgcgccgcccctccaccttcctcaacgccgtcgcgctcggcaacgtcggcgccggcaagtcggccgtgctcaacagcctcatcggccaccccgtgctgccgacgggtgagaacggggcgacgcgggcgccgatagtggtcgacctgcagggggatccggggctgagcagcaaatccatcgtcctgcagatcgacagcaagtcgcagcaggtgtcggcaagtgctctccgccattcgctgcaggacaggctgagcaaggggGcgtccggtggatcagggaaaggccgaaacgatgagatttacctcaagctgcggacaagtacaggtttgttgctgggcttcacttttactcttacattgcacaatgttgctcctccaataaaattggtcgatttgcctggcatagaccaacgagttatggatgattcaactatcagtgaatatgctggacataatgatgcaatattgattgttgtgataccagcaatgcaagctgctgatgttgcatcatctcgagctctcagactagcgaaggatattgatccagatggaaccagaacaataggtgttttaagtaaaattgatcaagcatctgcagatgcaaaaactgtatcttgtgttcaggctatcttgtctaacaagggtgcaccacgagcagcagctgaaattgagtgggttgctctaatagggcaatctgtctcaattgcatcggcccaagctggatcagttggttctgagaactcactggaaactgcctggcaggctgaagcagagacactcaaatccatcctaactggagctcctcgaagtaagctagggagaattgctctcgtggataccattgctaagcagatacgtaaaaggatgaaaattcggctacctaaccttttgtccgggcttcaggggaagtctcagatagtgcaaaatgaacttgcaaggttgggagaacagatggtatcaagcgctgaaggaaccagggctgttgctttggagctttgccgtgaattcgaagacaagtttcttgcccatgttacttctggtgagggGtctggttggaaaattgttgcaagctttgaggggaagtttccagataggatcaaacagcttcctttggacaggcattttgatattaacaatgtcaaaaggattgtcctggaagccgatggttatcaaccatatttgatatctccagagaaaggtttaaaatccttaataaaaggagtacttgaaatggcaaaggagccatcacggctgtgtgttgaagaggtacaccgtgtattattggacatagtaaatgcttctgcaaatgctacaccaggacttggaagatatcctccattcaaacgcgaggtcgttgaaattgcaaccaatgcattggatgtcttcaaaagtgatgcaaaaaagatggtagttgcacttgttgatatggagcgtgcctttgtcccaccacaacacttcatccgtttagtacaaagaagaatggaaaggcaacgtcgtgaggatgaggtgaaaaacaggtcatctaagaaagcccaagatgcagaacagtccaacaagggctcaggcacaggatctgagcaatctggtggtgccttgaaatcgttgaaagaaaaattcagtcagcaagacaaagataaagatgcaaaagagggaccaaatttgcaggttgctgggcctggtggtgaaataactgcaggctaccttttgaagaaaagtgcaaaaaataatgaatggagcaaaagatggtttgtcctaaatgagaagagtggaaagcttgggtacaccaagaaacaagaggagagacattttcgaggtgttattgtcctggaggaatgtaatctggaagagatagaagaggaagagctttccaagagtttgaaggattcaaagaaggccaatggggcagagaaaggcccaagtcttgtatttaagattactaacagagttgcctacaaaactgtgctgaaatctcatagtgctgttatactgaagGccgagactattgctgacaaggttgaatggatgaagaagataagaggtgtcattcaaagcaaagggggttctgtgaagggtttaaatactcctgagggtggttccatgaggcaaagccattctgatgggTCccttgatacgatggcccggaagcctgctgatcctgaagaagaacttcggtggatgtctcaagaagttcgtggttatgtagaggctgttttgaacagtttggcagcaaatgttccaaaggcaatcgtactttgccaagtggagaaagcaaaggaagatatgctaaatcagctctacagcaaaataagtgctcaaaccaatgcaaagattgaagaacttctccaagaggaccacaatgctaaacgtagacgggagaagtaccaaaaacaatcatctctattgtcaaagcttactcgtcagcttagtatccatgacaatagagcttctgttgcatcgtataccaatgatagttctggagctgagagtagcccacggacctctggccagtcaggtgaggactggaggtctgcgttcgattctgcatcaaatggctctgttgatcgatccagttcacacaatgaaacaaggtcaagaagtgctgacagccgtggcaaacgctatgaaaatggggacgtgaatggtggtaactctggcagccgacgcacaccaaaccgtttgccaccagcacctccagggcaaaaatattaa
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| Protein seq | MSSSAMEAMDELVQLAESMRQAASLLADDDPSDEASPRRPSTFLNAVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIVVDLQGDPGLSSKSIVLQIDSKSQQVSASALRHSLQDRLSKGASGGSGKGRNDEIYLKLRTSTGLLLGFTFTLTLHNVAPPIKLVDLPGIDQRVMDDSTISEYAGHNDAILIVVIPAMQAADVASSRALRLAKDIDPDGTRTIGVLSKIDQASADAKTVSCVQAILSNKGAPRAAAEIEWVALIGQSVSIASAQAGSVGSENSLETAWQAEAETLKSILTGAPRSKLGRIALVDTIAKQIRKRMKIRLPNLLSGLQGKSQIVQNELARLGEQMVSSAEGTRAVALELCREFEDKFLAHVTSGEGSGWKIVASFEGKFPDRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLKSLIKGVLEMAKEPSRLCVEEVHRVLLDIVNASANATPGLGRYPPFKREVVEIATNALDVFKSDAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREDEVKNRSSKKAQDAEQSNKGSGTGSEQSGGALKSLKEKFSQQDKDKDAKEGPNLQVAGPGGEITAGYLLKKSAKNNEWSKRWFVLNEKSGKLGYTKKQEERHFRGVIVLEECNLEEIEEEELSKSLKDSKKANGAEKGPSLVFKITNRVAYKTVLKSHSAVILKAETIADKVEWMKKIRGVIQSKGGSVKGLNTPEGGSMRQSHSDGSLDTMARKPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAIVLCQVEKAKEDMLNQLYSKISAQTNAKIEELLQEDHNAKRRREKYQKQSSLLSKLTRQLSIHDNRASVASYTNDSSGAESSPRTSGQSGEDWRSAFDSASNGSVDRSSSHNETRSRSADSRGKRYENGDVNGGNSGSRRTPNRLPPAPPGQKY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr02 | 32805726 | 32806624 | - | OsLima_02g0032780.01 | OsLima_02g0032780.01,OsLima_02g0032780.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.258336 | 0.557466 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0738900 | RBH | 2.704866 | 0.813198 | 8.701267 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g50550 | RBH | 1.749610 | 0.560073 | 2.133637 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0738900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033020 | RBH | 0.300639 | 30.872108 | 28.769369 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0033110 | RBH | 0.262508 | 15.016749 | 7.247626 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0033000 | RBH | 0.937701 | 43.650547 | 30.307867 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0032590 | RBH | 0.071883 | 2.406530 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0032720 | RBH | 3.340280 | 61.913937 | 42.595436 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0506300 | RBH | 16.3522255 | 28.9238605 | 25.561281 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0032500 | RBH | 0.208057 | 4.359591 | 2.877644 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0535500 | RBH | 17.5499815 | 17.3942845 | 47.532572 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0009850 | RBH | 1.407057 | 1.383744 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0032560 | RBH | 0.348313 | 40.551575 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0032900 | RBH | 1.798265 | 70.180244 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0032740 | RBH | 0.922298 | 3.982085 | 2.627623 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032370 | RBH | 0.104184 | 30.076710 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033060 | RBH | 0.876825 | 28.816870 | 10.995859 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0032790 | RBH | 1.260971 | 33.122746 | 12.948990 |
