Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_06g0004020 | OGI:06008120 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr06:2957040-2963721 | ||||||||
| Gene Symbol | DSG1, OsMAPK6, MAPK6, OsMPK6, OsSIPK, SIPK, OsMAPK1, MAPK1, MPK1, OsMPK1, MPK6, OsDSG1 | ||||||||||
| DNA seq | gagggagtctacaacttagaagaatctcgaagtaatgtttccagtcttgtgatcaactccaaactgccaccactgaatcaagagtcaatatatcctctttcattgaccacgtcttacaacatggagcattaagtaaaaccatgagaaatccatgaatcgacaagaaaatgggaaatttgatgataaccgctgaatttaggccgtcatcgttcatgaactaactcttcttacaaaagggactaaaaacatttaagatggaaaaaaatcccacatgaaacaacatacataagcataagaatggcatagcagctacccaggaacttgatcacaaagtacatttctactcttagaacaacaccttcagctttgaaccagggaggatttttcaggtgaggcaattatttacaactagtgatcactgtcggcgaccttttgtggcgcaggaggaaaaaactccatgaatagaatcaatccaaggctgaaatagaacaccagctactggtaatcagggttgaacgcaaggccttcttggtagattagatccttcatttgttcctcggacaatgcatgctgctcgaagtcaaagctgaagggtgatgagcagactggctcatcacttatgtcatgcagcgatgccaggtaaggatgtgcaagggcaccttcaactggataagaagaaataggagaaaagataagggggcacagagaaaatatgaaacatgcagagaaaatcaggtcgaaagttttgacacagggaacaatgcatttttaccattagaaaacttggcaatgactctttcaacattcccacctaattaagaatgatgctcgattcacgcattaagaataaagtgatgacacacctataccacctggattagctttagggtggatcaagagataaaaaggattgacatagttttttaaaaaaatatatatttaggttcgcatgtgatttagtaatatagaagtcatgcacagatgctctacaaatatatttaagtatccactgcagttcttactttctatcttaaaacagataggaagtggtaaacgctaactagaaatggccagtggcagattaaaagaaaggtacacatggtgtttaaaaaaaaacatagtttatgagagctttcaaaggcttctttcactcttttctttctttaggagaaaggcctatttttgcttgctattagcaagatagattcttgatggcaaaaacagcattcaaataccctttaaatcactaaaacatactatgccaatactgacctgttattctctgtctaggatcaaatgtcagcatcttttcaaccagatcaattgctaaaggatgaacatgcggaaatttttcaggaaaggactgccttgcatgtctaggaagttggcgaatgtatcttcttgcattttcatttacaaaatccagatcagcttcatttggcgttccaatgagctgcaattaaggaatttatgataggaaaatcaaacacacgataatgtgaaacagatagtatataaatcctctagtgagaaatgcatttgtattaatagccaaaactcagaattcaatatccttcatatcagccagaaagccaagaccttcttgagcaacataaattctctcctctttgcattttccttagttttaacatattcccataggataatcaacatattatatatttccaaaacagtactccagttatgctaaatatatgaccgcacaacataacctgatcaattcaatataaaataaagttcaaaagataataatagtgtgttctaacctccattagtagacgtaattgatggacatgatctcttccaggaaacaaaggtttacgatccatgagttccataaaaatacagcccacggaccacacatcaattgctgcagtatattcagaggaattcaacagaagttccggtgccctataccatcttgtgacaacgtactcagtcataaaatcggtttctgaggtggtacgagcaagtccaaaatcacaaattttgagatcacaatttgcattcaaaagtaggttgctgggcttcaagtctcggtgaaggacatttgctgaatgtatatacttcaagccacggagaatctgataaaggaaatactgcacaaaaaggtaaagaattacgcaagaacagttataccaaacatgtattatttcccagaacatggtagatgcatgcacaaggaaaatacaagagaacacaatcaagttatctggataagaaaagataggtgaggcagccattctagagttccactcaagaaaaggagagatatatctgtagcattgatcataagagcttgcaagctgcaatacagcaagacctctccagtgtgattgggcattgaacccttctcacgttgaatgtgttatgtgggaaatcctttgaatgtctcaagaacacgagagttctgtgagcgcgcatggcacgccacagcgtcgttctcgccgttatctgttgcttgcattagataagagttatcccttaagatttgaggtttgtttcagttagttccgattcattagcatattgtaatcgcctatataaggccactcttcctttctctgtttctcctcaccacggctttgtgggaggcaagggcattggcatcgccctcccgtcaagcactactacaaccttcggagctgcagtgccttgccgccagctcctaacagtatgtggtctactgataaatagcaatcaactcattattggattttatatcaaaggttagcaaataatatggtatctcgataaatagcaatcaactcattattggattttatatcaaaggttagcaaataatatggtatctcgataaatagcaatcaactcattattggattttatatcaaaggttagcaaataatatggtatctcgataaatagcaatcaactcattattggattttatatcaaaggttagcaaataatatggtatctccagagataaaactaattgtagcactttgcatatatgccttgcagggcaaaggtacgttcaggtatattagtaggtcgctaaattcgtttcttaatttcaaagattatgcatacctgcagagttcttaaaatgtgatacaaagttaccataaaagctttacattcaaccatttgtaccaaatttcttatagttcttacacaaaacatttataaaccatcaatacatacttcaatacttcccgctttttagttcttgaaagctcaatttgagcagaggcctagacaagcaagagaatccaagcagaccggaaaagccatttgtatgaaataaatgctaaagtggaaataaagttatgtttttgttttgaagaaggtacctggcagtgctcctctgacaatgcttgatttgagcgaataatttgatgcagatcagtatccatcaattcatatgcaatataaacgtcattgaatgaattcctttgtggaggaggtatgatatcccttatggcaacaatctgcatcacataagtaggaagttgagacaagttttgccttttggagcatccatgtacaaacacaagagctatgctactatggatatgtgaaatacaacagaccagctccaaatatcttataggagtagataaaataagtaaatcaactatgtccagaccaaccaaagcaagaacaaacatattgcatggaccaggaaataccatatgaaaatgacttgacaaagagatctatcttattcatgatggcctaatgttatagctcaagtgtttttgtcatttaagcactcaaacatagcggttgttttaaggaggcagaccaacgtgcatttcacttaaaatgaaaattagagtgtgtaatggggatgaacagcaagctaatgaggacttgaatagtgactagtaaagggctttagacgaagatggacatagaatagaaggaagcaatggaggagactttgcataattcctgaacagaacacaatgctcctttatgtagaggatcctaataatttatctcatagataagctgagcaaacgtgtgtgtagcacagtggtagagtctccggtagaggggacaccgacccgggctcgagcccaggttttgcacaaaaaaatcccccctcgttaatgctggtagaagagtgctccctgcatgaggttaagcatgcccagtgacacgccacgttcaggggcatttttctcgacttagctgaatgccgcgagccatcctaacccacggtctttttttttgtttgtttttttatctcatagataagcttaacagcttagtgcacttcataattaaatgacaatttggtattgaagtaatatactgcagacagaaatcgctactcgggctgctgccctctgtctgcagccaacctgcagcacgtgcacatgacaaaaaaaaaagttccaatatatctttcagaatacaggatcaccaatttggaagtaatgttttatgtaataatgcaaaataaccattttttgtgcaagctatattttaaaagtagaattggacttgataaacaaatcttagcttatgtttccaactttccgtacatacaattgcatttttatccagatttgaaaagtagaattggacttgatacacaatcttggctgatggcaataaagcaggtgcattatctaaggacttctactccaaaatttgcctaatctgatcgttttctacaaacacccgtaactggtataactcccaaaagcctcccctgcataattggagcactaaaacctgaaattaaacacttctctttctgcagtaggatacaaacaaagcggatcagttttagtttgaaaaaacttccaaaaaaaggcatgaggatgcatttgtgtatgcctgtgtcaaccagtctatggttcaacaaaagcagtatctgagcaactttttgtatgaaccttttttagggaagtatcaattgatctattatgttataataaagagggtgcaaaagggagccacctcgttcaatctagaagcctagaaataacgacgttaatagagggaaaaagataaatatatgcccgtttaatatagtggtgggcctagattacaacggtccaggttgaccagtaaattctatacaaaatataactctaattttaaatctagctcctctcatactctcatatttgcgcgggaaaatccactagtttaattataacggaatatttatgaccatccaaatttaattcacctcttcagaagaagctgagtttttctagggctggctatgaagatatggcctattctctaatccacttcccctgtggctgtctttctaccactaaccataaaaaaaaatatgttgcctctggtaagctgaaaatgatacttcaggcctatgctggaaatacaaccgtgggctactcctattagtcagtctttaaattggtaaaattcaaaggtccaagtccaacatccacacaaaaagtcaatcttaaaactttacaacaataacacaattcctagtactcctattccctaattccctccccactggcagtcactcccactgcattcagactggaTtttttttttttgtggggaagcattcagactggatttgactgacttaggaaaaaggtataacaccagattggtcctcctcctcctcaagctagttgtggcttgtgacatcagcacgtacaagaatcatgtgatgttgctactctccaggtcaggtctgttcacatcactcgctcccccccccccccccccccccccccccccccccccccccccccccccccattcaagaacacaatgaataacaacatccccaaaaggcagatggcttctttaaaggcatctccaaagttaccactatttctgaagctcccagctagccatgagccatccactcatcatcagcggcaagaaaggaggaaaaagctctaccaaattaggccgagcagtgacgaactcaatcatttggtaacctaaccctcacctcctcctcctttccccatttaatgcaaccaacttaactaaccagaggcaagagcattcaacgagaatctcaaaatctgcgcctaaaaatcgagggtgggaggggggggggggagggaattccgtggtcgaaacaatggagcggatcggagcactgacattctcgtggtccatatggcggagcagcttgatctccctgagcgtgcgcttggcgtcgatcttgttgtcgaacgcgttggcgatcttcttgatcgccacctgctcccccgtctccgagttgagcgccgagctgccatcccaatccaaaaatccaaaccccaaaacgaaatcagacgccgctgccaatggaatgggagacggggagagggggggagcaaacgaaccagacgatgccgtaggcgcccttgccgatggggaggatggggggcttgtacttggcggtgacctcgaacacgttcccgaagatgttgtactggatgaacctcccgccatggctcagcgtcgcctggatgttctccatcatccccgcccccgcccccgccgccgacgcagccgcagcaggcggctgctgcccgccgccgccgccgccgccggcctccgccatctccgtgtccgacggctgcgccccggcgtccatggccggattcggatttggatcgcgacgaggaggtggaggtggaggaagggaagggaagggaaagtggaggcggaattcgtcgcgagattt
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| CDS seq | atggacgccggggcgcagccgtcggacacggagatggcggaggccggcggcggcggcggcggcgggcagcagccgcctgctgcggctgcgtcggcggcgggggcgggggcggggatgatggagaacatccaggcgacgctgagccatggcgggaggttcatccagtacaacatcttcgggaacgtgttcgaggtcaccgccaagtacaagccccccatcctccccatcggcaagggcgcctacggcatcgtctgctcggcgctcaactcggagacgggggagcaggtggcgatcaagaagatcgccaacgcgttcgacaacaagatcgacgccaagcgcacgctcagggagatcaagctgctccgccatatggaccacgagaatattgttgccataagggatatcatacctcctccacaaaggaattcattcaatgacgtttatattgcatatgaattgatggatactgatctgcatcaaattattcgctcaaatcaagcattgtcagaggagcactgccagtatttcctttatcagattctccgtggcttgaagtatatacattcagcaaatgtccttcaccgagacttgaagcccagcaacctacttttgaatgcaaattgtgatctcaaaatttgtgattttggacttgctcgtaccacctcagaaaccgattttatgactgagtacgttgtcacaagatggtatagggcaccggaacttctgttgaattcctctgaatatactgcagcaattgatgtgtggtccgtgggctgtatttttatggaactcatggatcgtaaacctttgtttcctggaagagatcatgtccatcaattacgtctactaatggagctcattggaacgccaaatgaagctgatctggattttgtaaatgaaaatgcaagaagatacattcgccaacttcctagacatgcaaggcagtcctttcctgaaaaatttccgcatgttcatcctttagcaattgatctggttgaaaagatgctgacatttgatcctagacagagaataacagttgaaggtgcccttgcacatccttacctggcatcgctgcatgacataagtgatgagccagtctgctcatcacccttcagctttgacttcgagcagcatgcattgtccgaggaacaaatgaaggatctaatctaccaagaaggccttgcgttcaaccctgattaccagtag
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| Protein seq | MDAGAQPSDTEMAEAGGGGGGGQQPPAAAASAAGAGAGMMENIQATLSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNSSEYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPNEADLDFVNENARRYIRQLPRHARQSFPEKFPHVHPLAIDLVEKMLTFDPRQRITVEGALAHPYLASLHDISDEPVCSSPFSFDFEQHALSEEQMKDLIYQEGLAFNPDYQ |
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| Function | Mitogen-activated protein kinase 1 [UniProtKB/Swiss-Prot:Q84UI5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_06g0004020 | OsLima_06g0004020.01 | Chr06 | 2957040 | 2963721 | - | NAM | ||
| CDS seq | atggacgccggggcgcagccgtcggacacggagatggcggaggccggcggcggcggcggcggcgggcagcagccgcctgctgcggctgcgtcggcggcgggggcgggggcggggatgatggagaacatccaggcgacgctgagccatggcgggaggttcatccagtacaacatcttcgggaacgtgttcgaggtcaccgccaagtacaagccccccatcctccccatcggcaagggcgcctacggcatcgtctgctcggcgctcaactcggagacgggggagcaggtggcgatcaagaagatcgccaacgcgttcgacaacaagatcgacgccaagcgcacgctcagggagatcaagctgctccgccatatggaccacgagaatattgttgccataagggatatcatacctcctccacaaaggaattcattcaatgacgtttatattgcatatgaattgatggatactgatctgcatcaaattattcgctcaaatcaagcattgtcagaggagcactgccagtatttcctttatcagattctccgtggcttgaagtatatacattcagcaaatgtccttcaccgagacttgaagcccagcaacctacttttgaatgcaaattgtgatctcaaaatttgtgattttggacttgctcgtaccacctcagaaaccgattttatgactgagtacgttgtcacaagatggtatagggcaccggaacttctgttgaattcctctgaatatactgcagcaattgatgtgtggtccgtgggctgtatttttatggaactcatggatcgtaaacctttgtttcctggaagagatcatgtccatcaattacgtctactaatggagctcattggaacgccaaatgaagctgatctggattttgtaaatgaaaatgcaagaagatacattcgccaacttcctagacatgcaaggcagtcctttcctgaaaaatttccgcatgttcatcctttagcaattgatctggttgaaaagatgctgacatttgatcctagacagagaataacagttgaaggtgcccttgcacatccttacctggcatcgctgcatgacataagtgatgagccagtctgctcatcacccttcagctttgacttcgagcagcatgcattgtccgaggaacaaatgaaggatctaatctaccaagaaggccttgcgttcaaccctgattaccagtag
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| Protein seq | MDAGAQPSDTEMAEAGGGGGGGQQPPAAAASAAGAGAGMMENIQATLSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNSSEYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPNEADLDFVNENARRYIRQLPRHARQSFPEKFPHVHPLAIDLVEKMLTFDPRQRITVEGALAHPYLASLHDISDEPVCSSPFSFDFEQHALSEEQMKDLIYQEGLAFNPDYQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.254407 | 0.591054 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0154500 | RBH | 5.401667 | 2.253600 | 14.096676 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g06090 | RBH | 3.253549 | 1.473647 | 3.295213 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0154500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0004050 | RBH | 1.164796 | 49.839325 | 10.890113 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0003940 | RBH | 0.824063 | 11.713743 | 10.201847 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0003880 | RBH | 2.271103 | 69.522537 | 22.136238 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0003990 | RBH | 0.250041 | 1.491889 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0003890 | RBH | 8.014277 | 52.388702 | 42.366985 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0047300 | RBH | 26.215826 | 37.532963 | 33.077326 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0003790 | RBH | 1.061755 | 4.430677 | 4.049363 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0048600 | RBH | 28.2978525 | 28.7404365 | 35.6914825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0013300 | RBH | 0.214740 | 0.454927 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0003890 | RBH | 0.891193 | 18.022493 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0003930 | RBH | 3.144565 | 18.071333 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0003910 | RBH | 1.542401 | 2.922730 | 3.863767 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0003760 | RBH | 1.237674 | 21.504457 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G003760 | RBH | 1.180942 | 17.688375 | 8.518901 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0003940 | RBH | 2.575342 | 55.069756 | 24.584360 |
