Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_05g0022390 OGI:05066960 | 16/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) Chr05:25802926-25808789
Gene Symbol SDRLK-4
DNA seq

gaacgcgtcactcgcgcgaaccgcgacgaatcgaccatatggccatccatcagctcagctccgtgctcctcctcatgctgctcgcgccggcgacgtcgcgtgcccgcgacagcatcgcgccgggcgagccgctcgcgggccacgacacgctcgtctctgccggcgccggcgacggcggcggcttcgcgctcgggttcttcaccccgccgggatccaacgacacctacgtcggggtgtggtacgcgcgggtgtccccccgcaccgtcgtctgggtcgccaaccgcgccgaccccgtcccgggccccgtcgacggcaacgccggcgccacgctgtccgtgtcccgcgcctgcgagctcgccgtcgccgacgccaactccaccgtcgtgtggtcggtctcgccggcgacgacagggccctgcacggcgaggatacgggacgacggcaacctggtcgtcaccgacgagcgcggccgggtggcgtggcaggggttcgaccaccccaccgacacgctgctccccgggatgaggattggggtggacttcgccgccggcaacaacatgacgctgacggcgtggaagagcccctccgacccgtcgccgagctctgtggtcgtggccatggacacctccggcgatccggaggtgttcctctggaacgggccgaacaaggtgtggcgctccggcccctgggacggcatgcagttcaccggcgtcccggacaccatcacctacaagaacttcagcttcagcttcgtgaacagcgcccgggaggtcacctacagcttccaggtgcccgacgcgagcatcatgtcgcggctggtgctgaacagcagcggcggcgggctggtgcagcggtggacgtgggtggaggcggcgggggcgtggaacctgtactggtacgcgcccaaggaccagtgcgacgccgtgtctccgtgcggcgccaacGgggtgtgcgacaccaacagcctccccgtgtgctcctgcctccgcgggttcttgccgcggtcgccggcggcgtgggcgctgcgggacggccgcgacgggtgcgcgcgggagacgccgctcggttgcgccaacggcaccgacgggttcgccgtggtgcggcacgccaaggcgcccgacacgaccgccgcgacggtggactacgacgccgacctccagctgtgccggcggaggtgcctgggcaactgctcgtgcacggcgtacgccaacgccaacctcagcgcgccgcccgggcgccgcggctgcgtcatgtggaccggcgagctggaagaccttcgagtgtacccggccttcggccaggacctctacgtccgcctcgccgccgccgatctcggtatgtttcacttcaccgtctgatacagttgtttttctggtccttcctgcaattatttctcgatccatgattgcacactggttagtgagttttttttttttttgggtgatgtcataggacgttttacctcatgagatgtttaaagttactcctaataccataggaatagttacacaaattatgacaaactataacaaaaacgggtataatctgaatttattatccgacatgtttcaagtttaaaattttaacccgaACacacacacacagacagagagagagagagagagagagagactaggtacacaatgcagtatgcactaatcacaagtgaattagtccTtttttccccacgccatgtagattgagtttagctatgaatttcctttttgccatttagtatctgtagattactactagattgtcatgatcaaagtagcaaaggaatcaaggtagaccgctttttattgcggaaaagcagtcagatgtatgcattcatatgtttctaagtcagtactagttcagtcagtgagagggcactatttcttctgctcaagttagctgtgaactttactgtagcattcaagtcgaacttgcttcacgtaacttgtttttaaaaaaaataaagaaaaagaaaactacttcatggataaactggaccttacctaacctgtgcctttgtagcctgtaagtcccatctccacgaagtagaaaacattcctgtattgtgcctttcagtttcagatgctctgccggtctgcccaacccacatactcctatgatcctatccctctatccatctgatgctgtactgcaatccaatgaaagcgagattaggAaaaaaaaggttacctgacaatgtatgaatagattcgtttccaagtaaccccagaattattgggaagactttttgtgcccgtccaatcattcatccacagttcatagctgttatagctgcacatgataaaccggtaccttacccggcaacttagcatgtttcacttcgcttcggccctgcttctgcatagctccagtcctaatcttatctgcctgacggcactgctaagcaaaatggacacgactgttttcttcccttacctgagacatgaacacgttattttcgtgttgcatcagtacaagtcgccatcgctgataagtaaagtccatgttaccatctagtccaaattttagcctgcagacagaatcacagaatagaatgagtaatactacgtagttagcaatgactcaggcatgcatgaatcaatatgagtttattgcatgtgttgtgtttttgacatgtggttaatgtgcatgagccatgaggtccaacccctacgatgttgcatccacaaaattcaactggaagcctggaagcgaccaaaaagtttgttagtttcacatgttaggtggtcaaaatgaatatgcgttacattggtaaatgggaaaacataccaatttgccttctaatggagctcagcagatgatgttagatagcctacctcaataacatgagtaaaacttacggaacagtagcaccatatccatatatatgttccaTtttcaaaggatcatcaagccaaaagcaagtaaacaaaatcagcgtaccctgacttgctggtgcctggtgccatcacaaatttgtgttgtcaccttcatggctagcaacacgcgactgaactatctgcagtgaatcgatgtgcactgcaactccaggctattgctgatggggttaaggtggcaCcccctttccagcactgcaacatgatctaaacgctttaaacaaggtaaaatcccatgtttccttcatcgtccagatattttggttggacaagagacaagatggagaaattccatcctctttacgctgcaatattattgaaggcgtgcatggaccctctgcgttgcatgtttgtgttcagagtttccacggaacaggaccaccgatggtaccaaggcatccagttaacacaagttaatgtgatatgcaataatgcaattcatttggtgcattagaacattattattcaatctgtggggagaatgttcagcatgaactagggagctcccacgaaccatctcctgcaaaatatCAcacatcatgttttacatccagaatttcttcattagatagcactacaaaaggtagtactaaaatggaccaacctagaaaatggatgcctgagtttacctgatgcatttgaccatgcttgcaggtagacttctgaagtgaaaatccaatataaatttacgattctaaggccaatggtttgcaatctttctgatatgttttcttggcaatactcattatttggcaaccttctgagtttatacatcatcagaaggaatgctcatgtacaaaaaactagacaagaaagttgtaggtacagacaatcatgcagaactaatagttgttattcttgcacagattcaacaagcaagtctaagaagaagacgcacattataattgcagtagttgtcagcatctgtgcgctggcaattattttagcccttactgggatgtacatttggagaacaaagaagacAaaagcaaggcgacaaggtaacacctctgatcctaaacatatatagacaaaaattacctcttaaatccaaatgtaaaaaagggAacaaaaatcgaTCtttgtttgcttgtgtttcttaactttgataaattttcAaataggaccaagtaactggagtggtggtttacacagtagagagctccacagtgaaggaaatagCcatggggatgacctggatctgcctctatttgatttggagacaatagcatcagccacaaatggtttctcagcagACAacaaacttggagaaggtggctttgggccagtatacaaggtatgcacagatatctaactaattcatatatcagaagttgattaccataatcaaggttcatctaagatttcacaaacagttccttgactcaaacacatcatgatagctaatgttagcaacggaagcatcggtaaatcaaaattttatgtcttgcaggacacaagtaatagttgaaataaccagcaaagatggcattctaacttttcacatactatgaaatgtcagtacacacctgattgaaagtacttgacttcaaaattacagggtacactagaggatgggcaagaaatagcagttaaaacactttcaaagacgtcagtacagggtcttgatgagttcaggaatgaggttatgttgatagctaaactccagcatcgaaatcttgttcaacttattggctacagcgtttgtggacaagaaaagatgcttctatacgaatttatggaaaacaaaagcctggactgtttcctgtttggtatgcctttaacctttgtgagcatgaaaaattccatatctatcaaggaacaaacagaaatcttcctatgttctcagacaaatccaagagcaagctacttgactggcaaacaagataccacATaatcgaggggattgcccgaggtttgctgtatcttcaccaggactcaagatatagaatcatccacagagacctgaagacaagcaacaTtcttctggataaggagatgactcctaaaatttcagactttggtatggcaagaatgtttggcagtgacgacacggaaataaatacagttagagtggttggcacatagtaaggaccgaataacaaacacgttttaatacacaatttattaatctcctagtgttgactttgtcatttaatctcctaaaattgactatcttttcatggttttctacagcggctatatggcccccgagtacgcaatggatggagtattttcagtgaaatcagatgtattcagtttcggcgtcatagtgctagAaatcatttctggtaaaaggaacaggggtgtctacagctactccagccacctaaaccttctagcacgtgtaagcatgaatctgactcatttactctacgacaattgatgttgatttgattaattgaaaccacaaccaagaaaatatctctgaacctttttttgccgactaaatcctctaagcttttaccaggcatggagctcatggagtgaagggaacagcctcgatctcgtcgacaaaacactgaacggctcattcaaccaagaggaagtgctaaaatgcctcaaagtGgggctcctatgtgtccaggagaacccggacgaccgtcctctcatgtcccaggtgctcctgatgctggccagcgccgatgccgcctcattgccagatcccaggaagcctgggttcgtcgcaagaagaactgcaacggaggacacgtcgtcgagcagaccagactgcagcttcgtggacagcatgaccatcaccatgatcgagggcaggtaggaatttaggatcggagtcggagcgcgacattgtactgaagattactagaacgcctttgcctttgcattttctaggtattctgtgtagaatcatatatagtcttgtgattgattaaccctagcactgagttgcgaattcgatcccacccaaataaccagaaatcgagatgctacaaccatggtaaggaccaa

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CDS seq

atggccatccatcagctcagctccgtgctcctcctcatgctgctcgcgccggcgacgtcgcgtgcccgcgacagcatcgcgccgggcgagccgctcgcgggccacgacacgctcgtctctgccggcgccggcgacggcggcggcttcgcgctcgggttcttcaccccgccgggatccaacgacacctacgtcggggtgtggtacgcgcgggtgtccccccgcaccgtcgtctgggtcgccaaccgcgccgaccccgtcccgggccccgtcgacggcaacgccggcgccacgctgtccgtgtcccgcgcctgcgagctcgccgtcgccgacgccaactccaccgtcgtgtggtcggtctcgccggcgacgacagggccctgcacggcgaggatacgggacgacggcaacctggtcgtcaccgacgagcgcggccgggtggcgtggcaggggttcgaccaccccaccgacacgctgctccccgggatgaggattggggtggacttcgccgccggcaacaacatgacgctgacggcgtggaagagcccctccgacccgtcgccgagctctgtggtcgtggccatggacacctccggcgatccggaggtgttcctctggaacgggccgaacaaggtgtggcgctccggcccctgggacggcatgcagttcaccggcgtcccggacaccatcacctacaagaacttcagcttcagcttcgtgaacagcgcccgggaggtcacctacagcttccaggtgcccgacgcgagcatcatgtcgcggctggtgctgaacagcagcggcggcgggctggtgcagcggtggacgtgggtggaggcggcgggggcgtggaacctgtactggtacgcgcccaaggaccagtgcgacgccgtgtctccgtgcggcgccaacGgggtgtgcgacaccaacagcctccccgtgtgctcctgcctccgcgggttcttgccgcggtcgccggcggcgtgggcgctgcgggacggccgcgacgggtgcgcgcgggagacgccgctcggttgcgccaacggcaccgacgggttcgccgtggtgcggcacgccaaggcgcccgacacgaccgccgcgacggtggactacgacgccgacctccagctgtgccggcggaggtgcctgggcaactgctcgtgcacggcgtacgccaacgccaacctcagcgcgccgcccgggcgccgcggctgcgtcatgtggaccggcgagctggaagaccttcgagtgtacccggccttcggccaggacctctacgtccgcctcgccgccgccgatctcgattcaacaagcaagtctaagaagaagacgcacattataattgcagtagttgtcagcatctgtgcgctggcaattattttagcccttactgggatgtacatttggagaacaaagaagacAaaagcaaggcgacaaggaccaagtaactggagtggtggtttacacagtagagagctccacagtgaaggaaatagCcatggggatgacctggatctgcctctatttgatttggagacaatagcatcagccacaaatggtttctcagcagACAacaaacttggagaaggtggctttgggccagtatacaagggtacactagaggatgggcaagaaatagcagttaaaacactttcaaagacgtcagtacagggtcttgatgagttcaggaatgaggttatgttgatagctaaactccagcatcgaaatcttgttcaacttattggctacagcgtttgtggacaagaaaagatgcttctatacgaatttatggaaaacaaaagcctggactgtttcctgtttgacaaatccaagagcaagctacttgactggcaaacaagataccacATaatcgaggggattgcccgaggtttgctgtatcttcaccaggactcaagatatagaatcatccacagagacctgaagacaagcaacaTtcttctggataaggagatgactcctaaaatttcagactttggtatggcaagaatgtttggcagtgacgacacggaaataaatacagttagagtggttggcacatacggctatatggcccccgagtacgcaatggatggagtattttcagtgaaatcagatgtattcagtttcggcgtcatagtgctagAaatcatttctggtaaaaggaacaggggtgtctacagctactccagccacctaaaccttctagcacgtgcatggagctcatggagtgaagggaacagcctcgatctcgtcgacaaaacactgaacggctcattcaaccaagaggaagtgctaaaatgcctcaaagtGgggctcctatgtgtccaggagaacccggacgaccgtcctctcatgtcccaggtgctcctgatgctggccagcgccgatgccgcctcattgccagatcccaggaagcctgggttcgtcgcaagaagaactgcaacggaggacacgtcgtcgagcagaccagactgcagcttcgtggacagcatgaccatcaccatgatcgagggcaggtag

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Protein seq

MAIHQLSSVLLLMLLAPATSRARDSIAPGEPLAGHDTLVSAGAGDGGGFALGFFTPPGSNDTYVGVWYARVSPRTVVWVANRADPVPGPVDGNAGATLSVSRACELAVADANSTVVWSVSPATTGPCTARIRDDGNLVVTDERGRVAWQGFDHPTDTLLPGMRIGVDFAAGNNMTLTAWKSPSDPSPSSVVVAMDTSGDPEVFLWNGPNKVWRSGPWDGMQFTGVPDTITYKNFSFSFVNSAREVTYSFQVPDASIMSRLVLNSSGGGLVQRWTWVEAAGAWNLYWYAPKDQCDAVSPCGANGVCDTNSLPVCSCLRGFLPRSPAAWALRDGRDGCARETPLGCANGTDGFAVVRHAKAPDTTAATVDYDADLQLCRRRCLGNCSCTAYANANLSAPPGRRGCVMWTGELEDLRVYPAFGQDLYVRLAAADLDSTSKSKKKTHIIIAVVVSICALAIILALTGMYIWRTKKTKARRQGPSNWSGGLHSRELHSEGNSHGDDLDLPLFDLETIASATNGFSADNKLGEGGFGPVYKGTLEDGQEIAVKTLSKTSVQGLDEFRNEVMLIAKLQHRNLVQLIGYSVCGQEKMLLYEFMENKSLDCFLFDKSKSKLLDWQTRYHIIEGIARGLLYLHQDSRYRIIHRDLKTSNILLDKEMTPKISDFGMARMFGSDDTEINTVRVVGTYGYMAPEYAMDGVFSVKSDVFSFGVIVLEIISGKRNRGVYSYSSHLNLLARAWSSWSEGNSLDLVDKTLNGSFNQEEVLKCLKVGLLCVQENPDDRPLMSQVLLMLASADAASLPDPRKPGFVARRTATEDTSSSRPDCSFVDSMTITMIEGR

Function Receptor-like serine/threonine-protein kinase SD1-8 [UniProtKB/Swiss-Prot:O81905]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_05g0022390 OsLima_05g0022390.01 Chr05 25802926 25808789 + NAM
CDS seq

atggccatccatcagctcagctccgtgctcctcctcatgctgctcgcgccggcgacgtcgcgtgcccgcgacagcatcgcgccgggcgagccgctcgcgggccacgacacgctcgtctctgccggcgccggcgacggcggcggcttcgcgctcgggttcttcaccccgccgggatccaacgacacctacgtcggggtgtggtacgcgcgggtgtccccccgcaccgtcgtctgggtcgccaaccgcgccgaccccgtcccgggccccgtcgacggcaacgccggcgccacgctgtccgtgtcccgcgcctgcgagctcgccgtcgccgacgccaactccaccgtcgtgtggtcggtctcgccggcgacgacagggccctgcacggcgaggatacgggacgacggcaacctggtcgtcaccgacgagcgcggccgggtggcgtggcaggggttcgaccaccccaccgacacgctgctccccgggatgaggattggggtggacttcgccgccggcaacaacatgacgctgacggcgtggaagagcccctccgacccgtcgccgagctctgtggtcgtggccatggacacctccggcgatccggaggtgttcctctggaacgggccgaacaaggtgtggcgctccggcccctgggacggcatgcagttcaccggcgtcccggacaccatcacctacaagaacttcagcttcagcttcgtgaacagcgcccgggaggtcacctacagcttccaggtgcccgacgcgagcatcatgtcgcggctggtgctgaacagcagcggcggcgggctggtgcagcggtggacgtgggtggaggcggcgggggcgtggaacctgtactggtacgcgcccaaggaccagtgcgacgccgtgtctccgtgcggcgccaacGgggtgtgcgacaccaacagcctccccgtgtgctcctgcctccgcgggttcttgccgcggtcgccggcggcgtgggcgctgcgggacggccgcgacgggtgcgcgcgggagacgccgctcggttgcgccaacggcaccgacgggttcgccgtggtgcggcacgccaaggcgcccgacacgaccgccgcgacggtggactacgacgccgacctccagctgtgccggcggaggtgcctgggcaactgctcgtgcacggcgtacgccaacgccaacctcagcgcgccgcccgggcgccgcggctgcgtcatgtggaccggcgagctggaagaccttcgagtgtacccggccttcggccaggacctctacgtccgcctcgccgccgccgatctcgattcaacaagcaagtctaagaagaagacgcacattataattgcagtagttgtcagcatctgtgcgctggcaattattttagcccttactgggatgtacatttggagaacaaagaagacAaaagcaaggcgacaaggaccaagtaactggagtggtggtttacacagtagagagctccacagtgaaggaaatagCcatggggatgacctggatctgcctctatttgatttggagacaatagcatcagccacaaatggtttctcagcagACAacaaacttggagaaggtggctttgggccagtatacaagggtacactagaggatgggcaagaaatagcagttaaaacactttcaaagacgtcagtacagggtcttgatgagttcaggaatgaggttatgttgatagctaaactccagcatcgaaatcttgttcaacttattggctacagcgtttgtggacaagaaaagatgcttctatacgaatttatggaaaacaaaagcctggactgtttcctgtttgacaaatccaagagcaagctacttgactggcaaacaagataccacATaatcgaggggattgcccgaggtttgctgtatcttcaccaggactcaagatatagaatcatccacagagacctgaagacaagcaacaTtcttctggataaggagatgactcctaaaatttcagactttggtatggcaagaatgtttggcagtgacgacacggaaataaatacagttagagtggttggcacatacggctatatggcccccgagtacgcaatggatggagtattttcagtgaaatcagatgtattcagtttcggcgtcatagtgctagAaatcatttctggtaaaaggaacaggggtgtctacagctactccagccacctaaaccttctagcacgtgcatggagctcatggagtgaagggaacagcctcgatctcgtcgacaaaacactgaacggctcattcaaccaagaggaagtgctaaaatgcctcaaagtGgggctcctatgtgtccaggagaacccggacgaccgtcctctcatgtcccaggtgctcctgatgctggccagcgccgatgccgcctcattgccagatcccaggaagcctgggttcgtcgcaagaagaactgcaacggaggacacgtcgtcgagcagaccagactgcagcttcgtggacagcatgaccatcaccatgatcgagggcaggtag

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Protein seq

MAIHQLSSVLLLMLLAPATSRARDSIAPGEPLAGHDTLVSAGAGDGGGFALGFFTPPGSNDTYVGVWYARVSPRTVVWVANRADPVPGPVDGNAGATLSVSRACELAVADANSTVVWSVSPATTGPCTARIRDDGNLVVTDERGRVAWQGFDHPTDTLLPGMRIGVDFAAGNNMTLTAWKSPSDPSPSSVVVAMDTSGDPEVFLWNGPNKVWRSGPWDGMQFTGVPDTITYKNFSFSFVNSAREVTYSFQVPDASIMSRLVLNSSGGGLVQRWTWVEAAGAWNLYWYAPKDQCDAVSPCGANGVCDTNSLPVCSCLRGFLPRSPAAWALRDGRDGCARETPLGCANGTDGFAVVRHAKAPDTTAATVDYDADLQLCRRRCLGNCSCTAYANANLSAPPGRRGCVMWTGELEDLRVYPAFGQDLYVRLAAADLDSTSKSKKKTHIIIAVVVSICALAIILALTGMYIWRTKKTKARRQGPSNWSGGLHSRELHSEGNSHGDDLDLPLFDLETIASATNGFSADNKLGEGGFGPVYKGTLEDGQEIAVKTLSKTSVQGLDEFRNEVMLIAKLQHRNLVQLIGYSVCGQEKMLLYEFMENKSLDCFLFDKSKSKLLDWQTRYHIIEGIARGLLYLHQDSRYRIIHRDLKTSNILLDKEMTPKISDFGMARMFGSDDTEINTVRVVGTYGYMAPEYAMDGVFSVKSDVFSFGVIVLEIISGKRNRGVYSYSSHLNLLARAWSSWSEGNSLDLVDKTLNGSFNQEEVLKCLKVGLLCVQENPDDRPLMSQVLLMLASADAASLPDPRKPGFVARRTATEDTSSSRPDCSFVDSMTITMIEGR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0501400 RBH 0.257826 0.090645 0.866289
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g42210 RBH 0.174927 0.061167 0.360851
Nipponbare | IRGSP 1.0 | RAP-db Os05g0501400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0022630 RBH 0.000000 0.0 1.882727
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0022560 RBH 0.0 0.0 0.828567
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0022510 RBH 0.303136 0.000000 1.927463
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0022480 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0022570 RBH 1.152473 0.0 5.931616
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0382700 RBH 1.4183505 0.7231515 2.1638965
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0022170 RBH 0.034879 0.000000 0.398360
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0392800 RBH 1.1359995 0.163461 1.970359
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0034960 SBH 0.173435 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0022300 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0022430 RBH 0.000000 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0022490 RBH 0.0 0.0 0.153958
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0022470 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G021920 RBH 0.0 0.0 0.227276
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0022330 RBH 0.0 1.436371 1.555127
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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