Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_04g0007240 | OGI:04046380 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr04:14519507-14519848 | ||||||||
| Gene Symbol | WAK32, OsWAK32 | ||||||||||
| DNA seq | atgaggatctctgatgcagtacttcctctgctcctacttgtgtttgctgtggccactctcgtgcaagcctaccatggaaacatgagccttccatccgctgccatgcttgctggttgcaaaagaagctgcggcaatctgaccttcgactatcccttcggcactggatcatcacattgcttcaggcagcccgacttcgagctcatatgtgacgacaccacacggccaccgaggttgtttttcaggaatagcaccactgagatcgtcgaatcccctgattctggtaagatatcatataccattgattcaattcaggatccaacactaacttcagataagagataa |
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| CDS seq | atgaggatctctgatgcagtacttcctctgctcctacttgtgtttgctgtggccactctcgtgcaagcctaccatggaaacatgagccttccatccgctgccatgcttgctggttgcaaaagaagctgcggcaatctgaccttcgactatcccttcggcactggatcatcacattgcttcaggcagcccgacttcgagctcatatgtgacgacaccacacggccaccgaggttgtttttcaggaatagcaccactgagatcgtcgaatcccctgattctggtaagatatcatataccattgattcaattcaggatccaacactaacttcagataagagataa |
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| Protein seq | MRISDAVLPLLLLVFAVATLVQAYHGNMSLPSAAMLAGCKRSCGNLTFDYPFGTGSSHCFRQPDFELICDDTTRPPRLFFRNSTTEIVESPDSGKISYTIDSIQDPTLTSDKR |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_04g0007240 | OsLima_04g0007240.01 | Chr04 | 14519507 | 14519848 | + | NAM | ||
| CDS seq | atgaggatctctgatgcagtacttcctctgctcctacttgtgtttgctgtggccactctcgtgcaagcctaccatggaaacatgagccttccatccgctgccatgcttgctggttgcaaaagaagctgcggcaatctgaccttcgactatcccttcggcactggatcatcacattgcttcaggcagcccgacttcgagctcatatgtgacgacaccacacggccaccgaggttgtttttcaggaatagcaccactgagatcgtcgaatcccctgattctggtaagatatcatataccattgattcaattcaggatccaacactaacttcagataagagataa
More
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| Protein seq | MRISDAVLPLLLLVFAVATLVQAYHGNMSLPSAAMLAGCKRSCGNLTFDYPFGTGSSHCFRQPDFELICDDTTRPPRLFFRNSTTEIVESPDSGKISYTIDSIQDPTLTSDKR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0367201 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g29880 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0367201 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0009890 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0010640 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0010470 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0007570 | SBH | 0.0 | 0.072966 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0007630 | RBH | 0.0 | 0.000000 | 2.082394 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0225700 | RBH | 0.240014 | 1.414716 | 0.6980905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0007380 | RBH | 0.0 | 0.0 | 0.192101 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0226200 | SBH | 0.301192 | 0.262669 | 5.2724215 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0007300 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0007490 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007630 | SBH | 0.0 | 3.005310 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0007540 | SBH | 0.106444 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0007770 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G007440 | RBH | 0.0 | 0.000000 | 0.494728 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0007560 | RBH | 0.0 | 0.0 | 0.0 |
