Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0025980 | OGI:02071730 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:27212796-27216054 | ||||||||
| Gene Symbol | WAK15, OsWAK15, OsRLCK76, RLCK76 | ||||||||||
| DNA seq | ctagcgtggcaaactgactgaggatgataattcttgctccaaactgtagcaactggagatcccttcatatgataaatcgcctgcactggtatagttgttctgtgcttgggatttaccagcatttgggcttaaaaggtgctgaatctctccaccacttcctgggactgggagaaattggaattttcttagcctcttagttctcaggaattgcagcctcatctctacttctttcatagtaggtctatctcctcctctgagtttcaagcatgcctctgtaagtgaggcaatatcatcaatgtcttccctgtgagcctcttcaagaacctgataatctattatttcgataagagatccctcacggagtctgtcaacgaaataatgagacaaactttgttttgtgcctacatcgtttatgaaaatcggtttctttcttgtcaaaagttccaccagaatcactccaaaactatatacatcactcttttcagttagttgtccagtatggtaatactctgggtctaaataaccaaatgtgccttggacaatagtcaccacatgagtctcatcgagtgaaacagatcttgaagcaccaaagtcagagacctttgtagtaaagctgccatccaagagtatattggaagatttcacatctcgatggaaaataggtattgcagcagccgaatgcagataagcaagtgcccctgctgcttctgaagcaatcctaattcgatcatcccatgataatgaggatttaacactaacatcagtatgaagacgatcatgcaatgtaccatttggtatgaactcatataccagtaagggcacctcagattcgagacagcaaccaaaaagcttcaccacattgcgatggataatttgagataaaatagcaacctcattgataaactgatctatctcagtttgttccacaatttttgattttttaatggccaccacactctggtcagatagaatccctttataaactgtgccatgtcctccacgaccaagaacacgagtagcatcaaagttgttggttgcctcttctagttcctccaaggaaaatatccttgttttatttgtggcgctttcatctgagattagctgttccaagagtaggccctgatttttcttgaagtatgctcttctaattctcttttggatgcttttcttccacttattggctagaataattgcacctaatgcaataattatggaaccaatgccacaagtaataccagttgtaatacctacagccattcattaattttctgccgtgaagccactttgcattatcttaatgcaataagattgactaatctgtcagctatgacttacctataataagattgtgttgcttagctgatgcaacacactgtcttgtaattggattaaactcttttctgtgggggcaactagtgcatgtaaaacctccaggaaaattttgacatgtcccattgcagtagtttggcagtgagcattcatcaatatctgcaattaactcttcagttttttttttatattggtacaacgtatagacataggctaggcactagtacagccttgttcggttagagagggattggaggggattaattccaatcccgcttgatccccttgtagatgggattaaccgaacaaggctaaaggggaaatgccatggctaaactatccacataaaacttccataaaattcttaaacaattgcaaataggaggggaatgaacaggaacaaacctttacatccatctcggatatatggatttccttgaaaaccaggaagacacttgcaacgatatcccatgaatatgtttgcgtgggtgacgtttaggcaatcgctatggatactgcggcatgcatatgtagcattcttttttatatcggtatcacaagttaaattggctacggcccactttataacaatgttgtattctaaagagaagtcaaatcgatcttcaacaggaccataaatcactgtatcaccatattggtcaccttgagttattagtatctctctcccatatttcgtattattcaacaaattacttatagtcagagtcccatcttcaacggacacattagtcacaataaattgtgcttctcttgtttccaaaactgtgatatgatctggtgtacaattaagtcgaaaccttttgtttgcgaaacaaccttcttccagaccaaaagggaagggaatgatcatggttccgcatgatgtcggacagtgttctttatgcttggggttgtaatctgtcccacaaagagagtgacaagggatgaaagttagatatatatcgatatgtgtgtcttattttgcaggaaattaaaggtggtaggaagtaccttgcatgttgcatcctcccaaaatgtaaggattgccttgtagataacgattggtgcactcacaggtgtaacctcccgatgatatattttggcaattgctgccggtggtacaagcataacttgatttgtttaccagtgcacttccacagcttggttggtccgtgatggcaaactgaagcacggctccctcaacgttgctcacattcgtccaactcaagaaaagatcactcgcattacgtacgtaataatccgtatatgacatgaaagccatgatcccatgatgcagcggatctgatatttgtgctgcagcttcagcttgaacaagtgttgactgaaatccccgcatgtcccttgataacttgatggagcaacatccgttcccattacaaggctgtcctattgctattggtgccttctcaatgtcacatctactcatacaagaaccaacgaaatctcccgtaccaaactcgaacaaggtggcatcaaaattacaaccgacaacatagaaagtgttctcatctgaaattttaatacccttagctggcgacacccatgaaatgttgtaggtgtccataccttgccttgtcgtaaaattgaagtacataggagcgaaagccatgtcatattccattgctgttatctgggttgtactattggcaacaaggagcttgggagttttggtggcggtgttgcaggtaagctcgaagccgtcccgaaagcagcctcgcccaatcccgaaggggtaggagatgccatcgacttccccgcagctagaggggcagtgagcgagggagtcattagaagggacaatcaagagccctccaccaactccatagactgaagccaatactcgtggcgtagctgccgagcacaccagcacaaaagaagtggcacaaactgccagaaagctcgagctcat
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| CDS seq | atgagctcgagctttctggcagtttgtgccacttcttttgtgctggtgtgctcggcagctacgccacgagtattggcttcagtctatggagttggtggagggctcttgattgtcccttctaatgactccctcgctcactgcccctctagctgcggggaagtcgatggcatctcctaccccttcgggattgggcgaggctgctttcgggacggcttcgagcttacctgcaacaccgccaccaaaactcccaagctccttgttgccaatagtacaacccagataacagcaatggaatatgacatggctttcgctcctatgtacttcaattttacgacaaggcaaggtatggacacctacaacatttcatgggtgtcgccagctaagggtattaaaatttcagatgagaacactttctatgttgtcggttgtaattttgatgccaccttgttcgagtttggtacgggagatttcgttggttcttgtatgagtagatgtgacattgagaaggcaccaatagcaataggacagccttgtaatgggaacggatgttgctccatcaagttatcaagggacatgcggggatttcagtcaacacttgttcaagctgaagctgcagcacaaatatcagatccgctgcatcatgggatcatggctttcatgtcatatacggattattacgtacgtaatgcgagtgatcttttcttgagttggacgaatgtgagcaacgttgagggagccgtgcttcagtttgccatcacggaccaaccaagctgtggaagtgcactggtaaacaaatcaagttatgcttgtaccaccggcagcaattgccaaaatatatcatcgggaggttacacctgtgagtgcaccaatcgttatctacaaggcaatccttacattttgggaggatgcaacatgcaagattacaaccccaagcataaagaacactgtccgacatcatgcggaaccatgatcattcccttcccttttggtctggaagaaggttgtttcgcaaacaaaaggtttcgacttaattgtacaccagatcatatcacagttttggaaacaagagaagcacaatttattgtgactaatgtgtccgttgaagatgggactctgactataagtaatttgttgaataatacgaaatatgggagagagatactaataactcaaggtgaccaatatggtgatacagtgatttatggtcctgttgaagatcgatttgacttctctttagaatacaacattgttataaagtgggccgtagccaatttaacttgtgataccgatataaaaaagaatgctacatatgcatgccgcagtatccatagcgattgcctaaacgtcacccacgcaaacatattcatgggatatcgttgcaagtgtcttcctggttttcaaggaaatccatatatccgagatggatgtaaaggtattacaactggtattacttgtggcattggttccataattattgcattaggtgcaattattctagccaataagtggaagaaaagcatccaaaagagaattagaagagcatacttcaagaaaaatcagggcctactcttggaacagctaatctcagatgaaagcgccacaaataaaacaaggatattttccttggaggaactagaagaggcaaccaacaactttgatgctactcgtgttcttggtcgtggaggacatggcacagtttataaagggattctatctgaccagagtgtggtggccattaaaaaatcaaaaattgtggaacaaactgagatagatcagtttatcaatgaggttgctattttatctcaaattatccatcgcaatgtggtgaagctttttggttgctgtctcgaatctgaggtgcccttactggtatatgagttcataccaaatggtacattgcatgatcgtcttcatactgatgttagtgttaaatcctcattatcatgggatgatcgaattaggattgcttcagaagcagcaggggcacttgcttatctgcattcggctgctgcaatacctattttccatcgagatgtgaaatcttccaatatactcttggatggcagctttactacaaaggtctctgactttggtgcttcaagatctgtttcactcgatgagactcatgtggtgactattgtccaaggcacatttggttatttagacccagagtattaccatactggacaactaactgaaaagagtgatgtatatagttttggagtgattctggtggaacttttgacaagaaagaaaccgattttcataaacgatgtaggcacaaaacaaagtttgtctcattatttcgttgacagactccgtgagggatctcttatcgaaataatagattatcaggttcttgaagaggctcacagggaagacattgatgatattgcctcacttacagaggcatgcttgaaactcagaggaggagatagacctactatgaaagaagtagagatgaggctgcaattcctgagaactaagaggctaagaaaattccaatttctcccagtcccaggaagtggtggagagattcagcaccttttaagcccaaatgctggtaaatcccaagcacagaacaactataccagtgcaggcgatttatcatatgaagggatctccagttgctacagtttggagcaagaattatcatcctcagtcagtttgccacgctag
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| Protein seq | MSSSFLAVCATSFVLVCSAATPRVLASVYGVGGGLLIVPSNDSLAHCPSSCGEVDGISYPFGIGRGCFRDGFELTCNTATKTPKLLVANSTTQITAMEYDMAFAPMYFNFTTRQGMDTYNISWVSPAKGIKISDENTFYVVGCNFDATLFEFGTGDFVGSCMSRCDIEKAPIAIGQPCNGNGCCSIKLSRDMRGFQSTLVQAEAAAQISDPLHHGIMAFMSYTDYYVRNASDLFLSWTNVSNVEGAVLQFAITDQPSCGSALVNKSSYACTTGSNCQNISSGGYTCECTNRYLQGNPYILGGCNMQDYNPKHKEHCPTSCGTMIIPFPFGLEEGCFANKRFRLNCTPDHITVLETREAQFIVTNVSVEDGTLTISNLLNNTKYGREILITQGDQYGDTVIYGPVEDRFDFSLEYNIVIKWAVANLTCDTDIKKNATYACRSIHSDCLNVTHANIFMGYRCKCLPGFQGNPYIRDGCKGITTGITCGIGSIIIALGAIILANKWKKSIQKRIRRAYFKKNQGLLLEQLISDESATNKTRIFSLEELEEATNNFDATRVLGRGGHGTVYKGILSDQSVVAIKKSKIVEQTEIDQFINEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFIPNGTLHDRLHTDVSVKSSLSWDDRIRIASEAAGALAYLHSAAAIPIFHRDVKSSNILLDGSFTTKVSDFGASRSVSLDETHVVTIVQGTFGYLDPEYYHTGQLTEKSDVYSFGVILVELLTRKKPIFINDVGTKQSLSHYFVDRLREGSLIEIIDYQVLEEAHREDIDDIASLTEACLKLRGGDRPTMKEVEMRLQFLRTKRLRKFQFLPVPGSGGEIQHLLSPNAGKSQAQNNYTSAGDLSYEGISSCYSLEQELSSSVSLPR |
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| Function | Wall-associated receptor kinase 5 [UniProtKB/Swiss-Prot:Q9LMN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0025980 | OsLima_02g0025980.01 | Chr02 | 27212796 | 27216054 | - | NAM | ||
| CDS seq | atgagctcgagctttctggcagtttgtgccacttcttttgtgctggtgtgctcggcagctacgccacgagtattggcttcagtctatggagttggtggagggctcttgattgtcccttctaatgactccctcgctcactgcccctctagctgcggggaagtcgatggcatctcctaccccttcgggattgggcgaggctgctttcgggacggcttcgagcttacctgcaacaccgccaccaaaactcccaagctccttgttgccaatagtacaacccagataacagcaatggaatatgacatggctttcgctcctatgtacttcaattttacgacaaggcaaggtatggacacctacaacatttcatgggtgtcgccagctaagggtattaaaatttcagatgagaacactttctatgttgtcggttgtaattttgatgccaccttgttcgagtttggtacgggagatttcgttggttcttgtatgagtagatgtgacattgagaaggcaccaatagcaataggacagccttgtaatgggaacggatgttgctccatcaagttatcaagggacatgcggggatttcagtcaacacttgttcaagctgaagctgcagcacaaatatcagatccgctgcatcatgggatcatggctttcatgtcatatacggattattacgtacgtaatgcgagtgatcttttcttgagttggacgaatgtgagcaacgttgagggagccgtgcttcagtttgccatcacggaccaaccaagctgtggaagtgcactggtaaacaaatcaagttatgcttgtaccaccggcagcaattgccaaaatatatcatcgggaggttacacctgtgagtgcaccaatcgttatctacaaggcaatccttacattttgggaggatgcaacatgcaagattacaaccccaagcataaagaacactgtccgacatcatgcggaaccatgatcattcccttcccttttggtctggaagaaggttgtttcgcaaacaaaaggtttcgacttaattgtacaccagatcatatcacagttttggaaacaagagaagcacaatttattgtgactaatgtgtccgttgaagatgggactctgactataagtaatttgttgaataatacgaaatatgggagagagatactaataactcaaggtgaccaatatggtgatacagtgatttatggtcctgttgaagatcgatttgacttctctttagaatacaacattgttataaagtgggccgtagccaatttaacttgtgataccgatataaaaaagaatgctacatatgcatgccgcagtatccatagcgattgcctaaacgtcacccacgcaaacatattcatgggatatcgttgcaagtgtcttcctggttttcaaggaaatccatatatccgagatggatgtaaaggtattacaactggtattacttgtggcattggttccataattattgcattaggtgcaattattctagccaataagtggaagaaaagcatccaaaagagaattagaagagcatacttcaagaaaaatcagggcctactcttggaacagctaatctcagatgaaagcgccacaaataaaacaaggatattttccttggaggaactagaagaggcaaccaacaactttgatgctactcgtgttcttggtcgtggaggacatggcacagtttataaagggattctatctgaccagagtgtggtggccattaaaaaatcaaaaattgtggaacaaactgagatagatcagtttatcaatgaggttgctattttatctcaaattatccatcgcaatgtggtgaagctttttggttgctgtctcgaatctgaggtgcccttactggtatatgagttcataccaaatggtacattgcatgatcgtcttcatactgatgttagtgttaaatcctcattatcatgggatgatcgaattaggattgcttcagaagcagcaggggcacttgcttatctgcattcggctgctgcaatacctattttccatcgagatgtgaaatcttccaatatactcttggatggcagctttactacaaaggtctctgactttggtgcttcaagatctgtttcactcgatgagactcatgtggtgactattgtccaaggcacatttggttatttagacccagagtattaccatactggacaactaactgaaaagagtgatgtatatagttttggagtgattctggtggaacttttgacaagaaagaaaccgattttcataaacgatgtaggcacaaaacaaagtttgtctcattatttcgttgacagactccgtgagggatctcttatcgaaataatagattatcaggttcttgaagaggctcacagggaagacattgatgatattgcctcacttacagaggcatgcttgaaactcagaggaggagatagacctactatgaaagaagtagagatgaggctgcaattcctgagaactaagaggctaagaaaattccaatttctcccagtcccaggaagtggtggagagattcagcaccttttaagcccaaatgctggtaaatcccaagcacagaacaactataccagtgcaggcgatttatcatatgaagggatctccagttgctacagtttggagcaagaattatcatcctcagtcagtttgccacgctag
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| Protein seq | MSSSFLAVCATSFVLVCSAATPRVLASVYGVGGGLLIVPSNDSLAHCPSSCGEVDGISYPFGIGRGCFRDGFELTCNTATKTPKLLVANSTTQITAMEYDMAFAPMYFNFTTRQGMDTYNISWVSPAKGIKISDENTFYVVGCNFDATLFEFGTGDFVGSCMSRCDIEKAPIAIGQPCNGNGCCSIKLSRDMRGFQSTLVQAEAAAQISDPLHHGIMAFMSYTDYYVRNASDLFLSWTNVSNVEGAVLQFAITDQPSCGSALVNKSSYACTTGSNCQNISSGGYTCECTNRYLQGNPYILGGCNMQDYNPKHKEHCPTSCGTMIIPFPFGLEEGCFANKRFRLNCTPDHITVLETREAQFIVTNVSVEDGTLTISNLLNNTKYGREILITQGDQYGDTVIYGPVEDRFDFSLEYNIVIKWAVANLTCDTDIKKNATYACRSIHSDCLNVTHANIFMGYRCKCLPGFQGNPYIRDGCKGITTGITCGIGSIIIALGAIILANKWKKSIQKRIRRAYFKKNQGLLLEQLISDESATNKTRIFSLEELEEATNNFDATRVLGRGGHGTVYKGILSDQSVVAIKKSKIVEQTEIDQFINEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFIPNGTLHDRLHTDVSVKSSLSWDDRIRIASEAAGALAYLHSAAAIPIFHRDVKSSNILLDGSFTTKVSDFGASRSVSLDETHVVTIVQGTFGYLDPEYYHTGQLTEKSDVYSFGVILVELLTRKKPIFINDVGTKQSLSHYFVDRLREGSLIEIIDYQVLEEAHREDIDDIASLTEACLKLRGGDRPTMKEVEMRLQFLRTKRLRKFQFLPVPGSGGEIQHLLSPNAGKSQAQNNYTSAGDLSYEGISSCYSLEQELSSSVSLPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0632900 | RBH | 0.442298 | 0.075332 | 0.233727 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42160 | RBH | 0.206847 | 0.082306 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0632900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026160 | RBH | 0.0 | 1.345268 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0026280 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026110 | RBH | 0.000000 | 0.0 | 0.229882 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025680 | RBH | 0.034686 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025790 | SBH | 1.948071 | 0.0 | 0.463558 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0412400 | RBH | 0.5389205 | 0.3288485 | 0.6038495 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025660 | SBH | 0.123555 | 0.0 | 0.054398 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0441100 | RBH | 0.9225525 | 0.1917245 | 1.911297 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026010 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025680 | SBH | 0.105345 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026020 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025880 | SBH | 0.075280 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025490 | SBH | 0.130379 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026100 | SBH | 0.034894 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025920 | SBH | 0.0 | 0.000000 | 0.0 |
