Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0025900 | OGI:02071800 | 1/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:27148210-27152147 | ||||||||
| Gene Symbol | OsWee1, Wee1 | ||||||||||
| DNA seq | ttagcgcgggatattgattgaggatgaaaattcttgttcattactgtagcaactagagattccttcagatgttaaatcactagcgccgacaaagctgttctgtgcatgagatttactagcatttgggcatataaggtccttaatctctccatcaatttctacagtaagttgagaTttttttaacctcttagttctgaggaactgcaacctcatctgtacttctttcatagtaggcctatctcctcctctgggtttcaagcatacttctgtaagtgaggcaatatcattgatctcttccttatttgcctcttcaacaacctgagtatccattatttcaatgagagatccctcttgaagtccttcgacaaaatagtgagacaagctttgttttgcacctacatcattaataaaaattggttttttccttgtcaaaagttccacaagtattactccaaaactgtatacatcactcttttcagttaactgcccagtatggtagtagtctggatctagatagccaaatgtgccttggacaatagtcactacatgtgtctcatcaagtgaaacagatcttgaagcgccaaaatcagaaacctttgtagtgaagctgtcatctaagagtatgttggaagacttcacatctctatggaaaattggtattgcagcagctgagtgtagatatgcaagtgcccctgcagcttctactgcaattctaatacgatcatcccatgacaacaagcatttggcgctaacatcggtatggagaaggtcatataatgttccattagatatgaactcatataccagtaatggcacctcagattcaaggcagcaaccgaacaactttaccacattgcggtggatgatttgagacaatatggcaacctcattgataaactgatctatctcagtttgctctacaatttttgattttttaattgccaccacgcgctggtcagatagaatccctttgtaaactgtgccatgtcctccacgaccaagaacacgtgtagcatcaaagttgttggttgcctcctctaatttctccaaagaaaaaatctttgttttgtttgtggcactttcatctgagattagttgctctaatagcagtccttggtttttcttgaaatatgcttttcggattctcttctggatacctttcttccacttattggcaagcatagttgcacaaaatgcaagaactatggatccaaggccagaactgattccaactgcaatacctgtaggaagatttccttgcttaacagactcaattgaacacctacatcatttttcagtttgataattgtagtgttggaatgttaggtatcttacctagaataagattgcgcttcttagccgatgtaatacatcttccttttgtacggtcaaattccttaccatgtgggcaaggggtacaactatgggtcccaggtaaatttttgcatattccatcacatgaatttggctgtaagcactcgtcaatatctgcaaatagattggcatgcagtgagctctcattgtgatctatttgtcacatttatggtccggtttggtggcgatagatgtgcatccatgtttctcaatgtgaattcttgaatctagatttttcctaatgttatataatattgtgggacaacatagcgcacaattgaagtttgcatgtaaatggtaatggcacatacgacccttctgcttttccttcatatattaatttttagcggtataaacaataaaataaaaaggaaatagaagtccctatgcagacacggagacacctccctggcaattgctcaatgaggtttgtccggcacactaatctgatatgctgatacggcgactgactcgtatatgaattgatgactctgaattggatcaagttgtgctcatttatcatctcaataaattgaacacccataaattcataggttcatcttgtttgctatagtcatgcattccacgttctcctttatatgaaacatatgtaatttactagttttcttgactaaaattactttaatcgtagtataatctaatgatgaattcagatacatgttgtgtagttgaaactgaatagcaaatggaagcaatttgtgtttacgtgcaatatggcgcccagagggaggtagagtgagatacctgtgcagccatcttcgcctttgatgtatggattgccctcgaagccagcagagcactggcaacgataaccaagacgtatcttcccgcgcgtgacattaaggcatttgctatggtcgctgatgcatgcatatgtcgtgctcctctgtgaggctgtttcgcaggttagattggcaatcgcccatttcatattcatatcgaattcttcagagaactcaaaaagatcttgcacgtcctctaatgggtcgtccatgagttcaccatcaacggtgtgaattataaccaattcgtcctccccttggcttgtaccattcagtatattgcttacagtcaggtacccctcgttcgctgcaaccattgaaacatggaattttgttcttcctctgccgataattgtaaggttgtctgacgtacaactaagttgaaacttcttgtttgcaaagcagccttcttcaagcccaaaagggtatgggatgggcaagtttccacatgaccccttacagtttcttctagtaggattgggattgtaacctgatccgggccaaatagatacataagtgcaaatagaaataaaacaatagaaccaaaaagagattacttgctactatctatcatcaatatatctattactaaactgagtaggcaaggaatatgaagtaaacagtggtttttactgcttatggagttgagactacagcagtaatgacgtaacctatctaaactggttagtttttactcAaaaaaatttcttggttggtttctgtaccatccaatttttggtgtacctaaaaatatggcactataaatacaaatatagctacacgcctacaccctgaaacaaaaggtaagccgagactcgaaccttcaatgcagccgtccagaacgtaggggttggccaggctgccactaaaacgttcattattgcaatggcagttgtaaccgaatgacgcatctctacaaaagctattagtgccacatgcataactttccttgtccaatgaggcaatttcacaacttggctgatcaacgatagcagagtcaagcaacgcaccataataataattattgcttgtatttatccaacttgagtaaagatcattcggatcaaatgcataatcttcggttacgaaaaccttgacagtggagggcaccacttctgattgtgatgtgatactgtcatggtggattatcttgagcctaaagcctcgtagcccttccggcaaactaccaatagcgcagcagcccaatccaacacaaccctgcacatttgctagttccctttccatgattgttctgtcatttatgcatgtgctaatgcaagcaccgacggtctggttcgtgtcgatatcaaacaagtagacctcgaccccgcaaccaagaacatatagatgattataatgactgatgttaaaacccttagcaggggactcccacgacaagttgtagacactcgtacctggaattatggtaacgttgaagccaatagagacatatacaaactcgtcttccagtaggtctgtaatctcggttgtactattgcccaggaagagcttgggaagacgggtggtgttgtcgcaggtgacctcgaagccttgccggaagcaaccaggccctatcccgaatggataagagatgtttacattcccgcaacgggaagggcagtgtgcgagggagtcattcgaagggatagacaagagccctccgccaactccatagaccgcatccgatgctgggggcgtagctgccgagcacaccagcacaaaagaaatggcacaaactatcactaacaagctcgagctcat
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| CDS seq | atgagctcgagcttgttagtgatagtttgtgccatttcttttgtgctggtgtgctcggcagctacgcccccagcatcggatgcggtctatggagttggcggagggctcttgtctatcccttcgaatgactccctcgcacactgcccttcccgttgcgggaatgtaaacatctcttatccattcgggatagggcctggttgcttccggcaaggcttcgaggtcacctgcgacaacaccacccgtcttcccaagctcttcctgggcaatagtacaaccgagattacagacctactggaagacgagtttgtatatgtctctattggcttcaacgttaccataattccaggtacgagtgtctacaacttgtcgtgggagtcccctgctaagggttttaacatcagtcattataatcatctatatgttcttggttgcggggtcgaggtctacttgtttgatatcgacacgaaccagaccgtcggtgcttgcattagcacatgcataaatgacagaacaatcatggaaagggaactagcaaatgtgcagggttgtgttggattgggctgctgcgctattggtagtttgccggaagggctacgaggctttaggctcaagataatccaccatgacagtatcacatcacaatcagaagtggtgccctccactgtcaaggttttcgtaaccgaagattatgcatttgatccgaatgatctttactcaagttggataaatacaagcaataattattattatggtgcgttgcttgactctgctatcgttgatcagccaagttgtgaaattgcctcattggacaaggaaagttatgcatgtggcactaatagcttttgtagagatgcgtcattcggttacaactgccattgcaataatgaacgttttagtggcagcctggccaacccctacgttctggacggctgcattgaaggttacaatcccaatcctactagaagaaactgtaaggggtcatgtggaaacttgcccatcccatacccttttgggcttgaagaaggctgctttgcaaacaagaagtttcaacttagttgtacgtcagacaaccttacaattatcggcagaggaagaacaaaattccatgtttcaatggttgcagcgaacgaggggtacctgactgtaagcaatatactgaatggtacaagccaaggggaggacgaattggttataattcacaccgttgatggtgaactcatggacgacccattagaggacgtgcaagatctttttgagttctctgaagaattcgatatgaatatgaaatgggcgattgccaatctaacctgcgaaacagcctcacagaggagcacgacatatgcatgcatcagcgaccatagcaaatgccttaatgtcacgcgcgggaagatacgtcttggttatcgttgccagtgctctgctggcttcgagggcaatccatacatcaaaggcgaagatggctgcacaggtattgcagttggaatcagttctggccttggatccatagttcttgcattttgtgcaactatgcttgccaataagtggaagaaaggtatccagaagagaatccgaaaagcatatttcaagaaaaaccaaggactgctattagagcaactaatctcagatgaaagtgccacaaacaaaacaaagattttttctttggagaaattagaggaggcaaccaacaactttgatgctacacgtgttcttggtcgtggaggacatggcacagtttacaaagggattctatctgaccagcgcgtggtggcaattaaaaaatcaaaaattgtagagcaaactgagatagatcagtttatcaatgaggttgccatattgtctcaaatcatccaccgcaatgtggtaaagttgttcggttgctgccttgaatctgaggtgccattactggtatatgagttcatatctaatggaacattatatgaccttctccataccgatgttagcgccaaatgcttgttgtcatgggatgatcgtattagaattgcagtagaagctgcaggggcacttgcatatctacactcagctgctgcaataccaattttccatagagatgtgaagtcttccaacatactcttagatgacagcttcactacaaaggtttctgattttggcgcttcaagatctgtttcacttgatgagacacatgtagtgactattgtccaaggcacatttggctatctagatccagactactaccatactgggcagttaactgaaaagagtgatgtatacagttttggagtaatacttgtggaacttttgacaaggaaaaaaccaatttttattaatgatgtaggtgcaaaacaaagcttgtctcactattttgtcgaaggacttcaagagggatctctcattgaaataatggatactcaggttgttgaagaggcaaataaggaagagatcaatgatattgcctcacttacagaagtatgcttgaaacccagaggaggagataggcctactatgaaagaagtacagatgaggttgcagttcctcagaactaagaggttaaaaaaAtctcaacttactgtagaaattgatggagagattaaggaccttatatgcccaaatgctagtaaatctcatgcacagaacagctttgtcggcgctagtgatttaacatctgaaggaatctctagttgctacagtaatgaacaagaattttcatcctcaatcaatatcccgcgctaa
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| Protein seq | MSSSLLVIVCAISFVLVCSAATPPASDAVYGVGGGLLSIPSNDSLAHCPSRCGNVNISYPFGIGPGCFRQGFEVTCDNTTRLPKLFLGNSTTEITDLLEDEFVYVSIGFNVTIIPGTSVYNLSWESPAKGFNISHYNHLYVLGCGVEVYLFDIDTNQTVGACISTCINDRTIMERELANVQGCVGLGCCAIGSLPEGLRGFRLKIIHHDSITSQSEVVPSTVKVFVTEDYAFDPNDLYSSWINTSNNYYYGALLDSAIVDQPSCEIASLDKESYACGTNSFCRDASFGYNCHCNNERFSGSLANPYVLDGCIEGYNPNPTRRNCKGSCGNLPIPYPFGLEEGCFANKKFQLSCTSDNLTIIGRGRTKFHVSMVAANEGYLTVSNILNGTSQGEDELVIIHTVDGELMDDPLEDVQDLFEFSEEFDMNMKWAIANLTCETASQRSTTYACISDHSKCLNVTRGKIRLGYRCQCSAGFEGNPYIKGEDGCTGIAVGISSGLGSIVLAFCATMLANKWKKGIQKRIRKAYFKKNQGLLLEQLISDESATNKTKIFSLEKLEEATNNFDATRVLGRGGHGTVYKGILSDQRVVAIKKSKIVEQTEIDQFINEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLYDLLHTDVSAKCLLSWDDRIRIAVEAAGALAYLHSAAAIPIFHRDVKSSNILLDDSFTTKVSDFGASRSVSLDETHVVTIVQGTFGYLDPDYYHTGQLTEKSDVYSFGVILVELLTRKKPIFINDVGAKQSLSHYFVEGLQEGSLIEIMDTQVVEEANKEEINDIASLTEVCLKPRGGDRPTMKEVQMRLQFLRTKRLKKSQLTVEIDGEIKDLICPNASKSHAQNSFVGASDLTSEGISSCYSNEQEFSSSINIPR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0025900 | OsLima_02g0025900.01 | Chr02 | 27148210 | 27152147 | - | NAM | ||
| CDS seq | atgagctcgagcttgttagtgatagtttgtgccatttcttttgtgctggtgtgctcggcagctacgcccccagcatcggatgcggtctatggagttggcggagggctcttgtctatcccttcgaatgactccctcgcacactgcccttcccgttgcgggaatgtaaacatctcttatccattcgggatagggcctggttgcttccggcaaggcttcgaggtcacctgcgacaacaccacccgtcttcccaagctcttcctgggcaatagtacaaccgagattacagacctactggaagacgagtttgtatatgtctctattggcttcaacgttaccataattccaggtacgagtgtctacaacttgtcgtgggagtcccctgctaagggttttaacatcagtcattataatcatctatatgttcttggttgcggggtcgaggtctacttgtttgatatcgacacgaaccagaccgtcggtgcttgcattagcacatgcataaatgacagaacaatcatggaaagggaactagcaaatgtgcagggttgtgttggattgggctgctgcgctattggtagtttgccggaagggctacgaggctttaggctcaagataatccaccatgacagtatcacatcacaatcagaagtggtgccctccactgtcaaggttttcgtaaccgaagattatgcatttgatccgaatgatctttactcaagttggataaatacaagcaataattattattatggtgcgttgcttgactctgctatcgttgatcagccaagttgtgaaattgcctcattggacaaggaaagttatgcatgtggcactaatagcttttgtagagatgcgtcattcggttacaactgccattgcaataatgaacgttttagtggcagcctggccaacccctacgttctggacggctgcattgaaggttacaatcccaatcctactagaagaaactgtaaggggtcatgtggaaacttgcccatcccatacccttttgggcttgaagaaggctgctttgcaaacaagaagtttcaacttagttgtacgtcagacaaccttacaattatcggcagaggaagaacaaaattccatgtttcaatggttgcagcgaacgaggggtacctgactgtaagcaatatactgaatggtacaagccaaggggaggacgaattggttataattcacaccgttgatggtgaactcatggacgacccattagaggacgtgcaagatctttttgagttctctgaagaattcgatatgaatatgaaatgggcgattgccaatctaacctgcgaaacagcctcacagaggagcacgacatatgcatgcatcagcgaccatagcaaatgccttaatgtcacgcgcgggaagatacgtcttggttatcgttgccagtgctctgctggcttcgagggcaatccatacatcaaaggcgaagatggctgcacaggtattgcagttggaatcagttctggccttggatccatagttcttgcattttgtgcaactatgcttgccaataagtggaagaaaggtatccagaagagaatccgaaaagcatatttcaagaaaaaccaaggactgctattagagcaactaatctcagatgaaagtgccacaaacaaaacaaagattttttctttggagaaattagaggaggcaaccaacaactttgatgctacacgtgttcttggtcgtggaggacatggcacagtttacaaagggattctatctgaccagcgcgtggtggcaattaaaaaatcaaaaattgtagagcaaactgagatagatcagtttatcaatgaggttgccatattgtctcaaatcatccaccgcaatgtggtaaagttgttcggttgctgccttgaatctgaggtgccattactggtatatgagttcatatctaatggaacattatatgaccttctccataccgatgttagcgccaaatgcttgttgtcatgggatgatcgtattagaattgcagtagaagctgcaggggcacttgcatatctacactcagctgctgcaataccaattttccatagagatgtgaagtcttccaacatactcttagatgacagcttcactacaaaggtttctgattttggcgcttcaagatctgtttcacttgatgagacacatgtagtgactattgtccaaggcacatttggctatctagatccagactactaccatactgggcagttaactgaaaagagtgatgtatacagttttggagtaatacttgtggaacttttgacaaggaaaaaaccaatttttattaatgatgtaggtgcaaaacaaagcttgtctcactattttgtcgaaggacttcaagagggatctctcattgaaataatggatactcaggttgttgaagaggcaaataaggaagagatcaatgatattgcctcacttacagaagtatgcttgaaacccagaggaggagataggcctactatgaaagaagtacagatgaggttgcagttcctcagaactaagaggttaaaaaaAtctcaacttactgtagaaattgatggagagattaaggaccttatatgcccaaatgctagtaaatctcatgcacagaacagctttgtcggcgctagtgatttaacatctgaaggaatctctagttgctacagtaatgaacaagaattttcatcctcaatcaatatcccgcgctaa
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| Protein seq | MSSSLLVIVCAISFVLVCSAATPPASDAVYGVGGGLLSIPSNDSLAHCPSRCGNVNISYPFGIGPGCFRQGFEVTCDNTTRLPKLFLGNSTTEITDLLEDEFVYVSIGFNVTIIPGTSVYNLSWESPAKGFNISHYNHLYVLGCGVEVYLFDIDTNQTVGACISTCINDRTIMERELANVQGCVGLGCCAIGSLPEGLRGFRLKIIHHDSITSQSEVVPSTVKVFVTEDYAFDPNDLYSSWINTSNNYYYGALLDSAIVDQPSCEIASLDKESYACGTNSFCRDASFGYNCHCNNERFSGSLANPYVLDGCIEGYNPNPTRRNCKGSCGNLPIPYPFGLEEGCFANKKFQLSCTSDNLTIIGRGRTKFHVSMVAANEGYLTVSNILNGTSQGEDELVIIHTVDGELMDDPLEDVQDLFEFSEEFDMNMKWAIANLTCETASQRSTTYACISDHSKCLNVTRGKIRLGYRCQCSAGFEGNPYIKGEDGCTGIAVGISSGLGSIVLAFCATMLANKWKKGIQKRIRKAYFKKNQGLLLEQLISDESATNKTKIFSLEKLEEATNNFDATRVLGRGGHGTVYKGILSDQRVVAIKKSKIVEQTEIDQFINEVAILSQIIHRNVVKLFGCCLESEVPLLVYEFISNGTLYDLLHTDVSAKCLLSWDDRIRIAVEAAGALAYLHSAAAIPIFHRDVKSSNILLDDSFTTKVSDFGASRSVSLDETHVVTIVQGTFGYLDPDYYHTGQLTEKSDVYSFGVILVELLTRKKPIFINDVGAKQSLSHYFVEGLQEGSLIEIMDTQVVEEANKEEINDIASLTEVCLKPRGGDRPTMKEVQMRLQFLRTKRLKKSQLTVEIDGEIKDLICPNASKSHAQNSFVGASDLTSEGISSCYSNEQEFSSSINIPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.203078 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0632100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42150 | SBH | 0.102612 | 0.000000 | 0.143043 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0632100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026140 | SBH | 0.074024 | 0.000000 | 0.411168 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0026260 | SBH | 0.084580 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026110 | SBH | 0.000000 | 0.0 | 0.229882 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025680 | SBH | 0.034686 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025790 | SBH | 1.948071 | 0.0 | 0.463558 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0411800 | SBH | 0.449585 | 1.3569995 | 1.193446 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025660 | SBH | 0.123555 | 0.0 | 0.054398 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0440400 | SBH | 0.6720785 | 1.042034 | 1.201829 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025670 | SBH | 0.268750 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026010 | SBH | 9.600235 | 10.190819 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025880 | SBH | 0.075280 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025490 | SBH | 0.130379 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026100 | SBH | 0.034894 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025910 | SBH | 0.124499 | 0.0 | 0.0 |
