Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0023360 | OGI:02066020 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:24661711-24663896 | ||||||||
| Gene Symbol | CYP94E1, OsCYP94E1 | ||||||||||
| DNA seq | ggacaaaattaaactatgctttcttctttggaaataaaggtacatacacgggcagacatactctttaagaggtagaatacacttgtttagtatcacaatgtttagcatccatccgctctaaaataaactatcttcgtactaacatacgaatttagatatagagtccacttattttgggacggatggggtacaccagagatgaacacacatacacagtcacacaggcaagaaaaatattcggagtagtaagcagaaaatgtctgatgatttgatcgatcgcgtctttttccgccacactgtagtccagcgcgagacggcaccagctgctcttcactcttgagctgtttcacagtacagcgatcagtccagtcctcgagattacgattttttaatgacaattagcgcgggaaagcaatgtgtgtgagtagtttgttaattagcaatgcggagtaacgacagagactgtttggttggttagagatggttactgttgcagcttccgacagcaacgtggcgaccggctgcaacgtcgtcgtcgtcgtcgtcgtcggcgacgacgtggcgcggcggcggcgacggtggcggcggcgacctcctcctgaagcgcaccatgaggccgttcttcatgtacagcgtcgtggtcagcttcggcttcacctcctgcccgggcaccacctcgacggcgaacctggacagcaccgccgccgccgcggtcttcatctgcgtgtaggcgaaccgcttcccgatgcacagcctcgggccggcgttgaacaccgcgtacttgaacgggctctcgccgccggcgaacgcgccgccgcgcatccaccgctcgggccggaacgcggccgcgtcgtcgccccacgacgccgggtcgcgcccgatcgcgtaggtgtagtagatcacgcgctgccgcgctcgcaccggcgtgccgtccgggagcacgtcgtcggcgagggcctccttgaagtcgacgggcaccggcgggtacagccgcatcgcctccgtgagcgccgcgtggaggtagtccatcctcttgatgtcgccgcccgcggcgaggacgtcgccgacgacgcgggactcgacgtcggggtggccggcgagcagccagaagaaccaggcgagccccacggagctcgtgtcgcggcccgcgaggatgaagctgatgcagaagtcgcggaggaactcgttggagtagtcggcgcccggcgccgacgacatgagccgcgacaggaggtcgcaccggccgcgcaggctcccgaccttgcgcatctcgttccggcggtcggcgaccgcccgctcggcgaactcgcggacggcgcgcgtggcctcgacgagccgccgctcgctgccggcgcggaggagccgcttggccttccagatgaagggcggggtgacgaaccgcaggagcgagagctccgtggcgagctcgaacgcgcgcgcgaacggcacgtcggggaggccgtcggcgaggcacccggcgtccaccccgaacgccacggcgcagatgttgtcgaacgtgaaccggagcagcacctcctggaggtcgacggcggcgccgccgccactcagccgctcggccagcggcacgaggcggccgtacaccagctgctcgatgctcctcaccgagaactccacgaaccgcgacgagtgcatctcggcggtggccgcccggcgctgggcgcgccacgcctcgccgtcggcgttgaagataccgccgccgagcagctcgacgaagcgctcccggtagtagggccccttggggtagttgccgaagttggccctgagcacgtgctcgacgttggccggcgcggaggttatgacgccggaggagcccccgccccacgtgccgcggtacgggaacacgccgccggcgcgcagcagcgcggcggagccccactcgtagatgtcgtcgcggtggacgaacagcgtgggcacgatgcccactagcggccacagcaccggcgccccgcggcgccgcgcccgcaccgcgctcacggcggcgctgaacgcgaacagcaccgcgccggccaccgccaggtcgctcgcccgcacgtgctcccgcaccgcgccgacgatcgcggcggcggcggcggcggccatggacgcgatcgccatcgatcgtgtcgtgtctctctccggcgccggcgaagctgcgagactcagtgacccgtttcgatcgatggcgc
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| CDS seq | atggcgatcgcgtccatggccgccgccgccgccgccgcgatcgtcggcgcggtgcgggagcacgtgcgggcgagcgacctggcggtggccggcgcggtgctgttcgcgttcagcgccgccgtgagcgcggtgcgggcgcggcgccgcggggcgccggtgctgtggccgctagtgggcatcgtgcccacgctgttcgtccaccgcgacgacatctacgagtggggctccgccgcgctgctgcgcgccggcggcgtgttcccgtaccgcggcacgtggggcgggggctcctccggcgtcataacctccgcgccggccaacgtcgagcacgtgctcagggccaacttcggcaactaccccaaggggccctactaccgggagcgcttcgtcgagctgctcggcggcggtatcttcaacgccgacggcgaggcgtggcgcgcccagcgccgggcggccaccgccgagatgcactcgtcgcggttcgtggagttctcggtgaggagcatcgagcagctggtgtacggccgcctcgtgccgctggccgagcggctgagtggcggcggcgccgccgtcgacctccaggaggtgctgctccggttcacgttcgacaacatctgcgccgtggcgttcggggtggacgccgggtgcctcgccgacggcctccccgacgtgccgttcgcgcgcgcgttcgagctcgccacggagctctcgctcctgcggttcgtcaccccgcccttcatctggaaggccaagcggctcctccgcgccggcagcgagcggcggctcgtcgaggccacgcgcgccgtccgcgagttcgccgagcgggcggtcgccgaccgccggaacgagatgcgcaaggtcgggagcctgcgcggccggtgcgacctcctgtcgcggctcatgtcgtcggcgccgggcgccgactactccaacgagttcctccgcgacttctgcatcagcttcatcctcgcgggccgcgacacgagctccgtggggctcgcctggttcttctggctgctcgccggccaccccgacgtcgagtcccgcgtcgtcggcgacgtcctcgccgcgggcggcgacatcaagaggatggactacctccacgcggcgctcacggaggcgatgcggctgtacccgccggtgcccgtcgacttcaaggaggccctcgccgacgacgtgctcccggacggcacgccggtgcgagcgcggcagcgcgtgatctactacacctacgcgatcgggcgcgacccggcgtcgtggggcgacgacgcggccgcgttccggcccgagcggtggatgcgcggcggcgcgttcgccggcggcgagagcccgttcaagtacgcggtgttcaacgccggcccgaggctgtgcatcgggaagcggttcgcctacacgcagatgaagaccgcggcggcggcggtgctgtccaggttcgccgtcgaggtggtgcccgggcaggaggtgaagccgaagctgaccacgacgctgtacatgaagaacggcctcatggtgcgcttcaggaggaggtcgccgccgccaccgtcgccgccgccgcgccacgtcgtcgccgacgacgacgacgacgacgacgttgcagccggtcgccacgttgctgtcggaagctgcaacagtaaccatctctaa
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| Protein seq | MAIASMAAAAAAAIVGAVREHVRASDLAVAGAVLFAFSAAVSAVRARRRGAPVLWPLVGIVPTLFVHRDDIYEWGSAALLRAGGVFPYRGTWGGGSSGVITSAPANVEHVLRANFGNYPKGPYYRERFVELLGGGIFNADGEAWRAQRRAATAEMHSSRFVEFSVRSIEQLVYGRLVPLAERLSGGGAAVDLQEVLLRFTFDNICAVAFGVDAGCLADGLPDVPFARAFELATELSLLRFVTPPFIWKAKRLLRAGSERRLVEATRAVREFAERAVADRRNEMRKVGSLRGRCDLLSRLMSSAPGADYSNEFLRDFCISFILAGRDTSSVGLAWFFWLLAGHPDVESRVVGDVLAAGGDIKRMDYLHAALTEAMRLYPPVPVDFKEALADDVLPDGTPVRARQRVIYYTYAIGRDPASWGDDAAAFRPERWMRGGAFAGGESPFKYAVFNAGPRLCIGKRFAYTQMKTAAAAVLSRFAVEVVPGQEVKPKLTTTLYMKNGLMVRFRRRSPPPPSPPPRHVVADDDDDDDVAAGRHVAVGSCNSNHL |
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| Function | Cytochrome P450 86B1 [UniProtKB/Swiss-Prot:Q9FMY1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0023360 | OsLima_02g0023360.01 | Chr02 | 24661711 | 24663896 | - | NAM | ||
| CDS seq | atggcgatcgcgtccatggccgccgccgccgccgccgcgatcgtcggcgcggtgcgggagcacgtgcgggcgagcgacctggcggtggccggcgcggtgctgttcgcgttcagcgccgccgtgagcgcggtgcgggcgcggcgccgcggggcgccggtgctgtggccgctagtgggcatcgtgcccacgctgttcgtccaccgcgacgacatctacgagtggggctccgccgcgctgctgcgcgccggcggcgtgttcccgtaccgcggcacgtggggcgggggctcctccggcgtcataacctccgcgccggccaacgtcgagcacgtgctcagggccaacttcggcaactaccccaaggggccctactaccgggagcgcttcgtcgagctgctcggcggcggtatcttcaacgccgacggcgaggcgtggcgcgcccagcgccgggcggccaccgccgagatgcactcgtcgcggttcgtggagttctcggtgaggagcatcgagcagctggtgtacggccgcctcgtgccgctggccgagcggctgagtggcggcggcgccgccgtcgacctccaggaggtgctgctccggttcacgttcgacaacatctgcgccgtggcgttcggggtggacgccgggtgcctcgccgacggcctccccgacgtgccgttcgcgcgcgcgttcgagctcgccacggagctctcgctcctgcggttcgtcaccccgcccttcatctggaaggccaagcggctcctccgcgccggcagcgagcggcggctcgtcgaggccacgcgcgccgtccgcgagttcgccgagcgggcggtcgccgaccgccggaacgagatgcgcaaggtcgggagcctgcgcggccggtgcgacctcctgtcgcggctcatgtcgtcggcgccgggcgccgactactccaacgagttcctccgcgacttctgcatcagcttcatcctcgcgggccgcgacacgagctccgtggggctcgcctggttcttctggctgctcgccggccaccccgacgtcgagtcccgcgtcgtcggcgacgtcctcgccgcgggcggcgacatcaagaggatggactacctccacgcggcgctcacggaggcgatgcggctgtacccgccggtgcccgtcgacttcaaggaggccctcgccgacgacgtgctcccggacggcacgccggtgcgagcgcggcagcgcgtgatctactacacctacgcgatcgggcgcgacccggcgtcgtggggcgacgacgcggccgcgttccggcccgagcggtggatgcgcggcggcgcgttcgccggcggcgagagcccgttcaagtacgcggtgttcaacgccggcccgaggctgtgcatcgggaagcggttcgcctacacgcagatgaagaccgcggcggcggcggtgctgtccaggttcgccgtcgaggtggtgcccgggcaggaggtgaagccgaagctgaccacgacgctgtacatgaagaacggcctcatggtgcgcttcaggaggaggtcgccgccgccaccgtcgccgccgccgcgccacgtcgtcgccgacgacgacgacgacgacgacgttgcagccggtcgccacgttgctgtcggaagctgcaacagtaaccatctctaa
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| Protein seq | MAIASMAAAAAAAIVGAVREHVRASDLAVAGAVLFAFSAAVSAVRARRRGAPVLWPLVGIVPTLFVHRDDIYEWGSAALLRAGGVFPYRGTWGGGSSGVITSAPANVEHVLRANFGNYPKGPYYRERFVELLGGGIFNADGEAWRAQRRAATAEMHSSRFVEFSVRSIEQLVYGRLVPLAERLSGGGAAVDLQEVLLRFTFDNICAVAFGVDAGCLADGLPDVPFARAFELATELSLLRFVTPPFIWKAKRLLRAGSERRLVEATRAVREFAERAVADRRNEMRKVGSLRGRCDLLSRLMSSAPGADYSNEFLRDFCISFILAGRDTSSVGLAWFFWLLAGHPDVESRVVGDVLAAGGDIKRMDYLHAALTEAMRLYPPVPVDFKEALADDVLPDGTPVRARQRVIYYTYAIGRDPASWGDDAAAFRPERWMRGGAFAGGESPFKYAVFNAGPRLCIGKRFAYTQMKTAAAAVLSRFAVEVVPGQEVKPKLTTTLYMKNGLMVRFRRRSPPPPSPPPRHVVADDDDDDDVAAGRHVAVGSCNSNHL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0596300 | RBH | 0.0 | 0.0 | 1.612412 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g38290 | RBH | 0.0 | 0.0 | 0.566938 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0596300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0023500 | RBH | 0.0 | 0.0 | 4.390234 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0023610 | RBH | 0.0 | 0.0 | 1.382392 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0023580 | RBH | 0.0 | 0.0 | 4.854840 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0023290 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023180 | RBH | 0.0 | 0.0 | 15.442440 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0378900 | RBH | 0.1911475 | 0.002493 | 0.0294085 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0022970 | RBH | 0.0 | 0.0 | 0.480008 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0407000 | RBH | 0.6594755 | 0 | 0.0160905 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0012300 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0023200 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0023530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0023240 | RBH | 0.0 | 0.0 | 0.223306 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0023060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G023490 | RBH | 0.0 | 0.0 | 0.649300 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0023340 | RBH | 0.0 | 0.0 | 11.884831 |
