Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0012620 | OGI:02029370 | 5/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:10832230-10837311 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgtggaaagataaaactgtcagctttattaaggctatgacctcaagtatagttccctgtttctcatcgaatgtacattttttgtccacagggtgaaaactacggagtactatctagactccaatcatcatgagcttatcaaagagcattgggttcattactggcatcaatgagtgtgtaaatttttttcagtgggctaggtctaccatttcatatcttcacggtcgatggagccgcacttacgagcaaaagcttctagatgaagtatcacagttgcagagtggcctacaacgtcttagagacactcttcctgcaaagtatgatctcattgatcgagctgagtggatgagccacaaagattgtgtggccaagctccttccaaatcttaaggatgcgttgtatgatgctgatgatcttcttgatgagtttgtatggtatgaacaaaagatggttttggagggtaatgaactaagccaacctccgtttttgcacttctacgataatgtccttcaaggaagcttcaataaagtgaatgatatcatggaaaggttgaataatatttctagccaactggagaagatgggattggatgaagttactcatcgattcgacaaattactcaggccagagactagctctttcccaaatgaaagaagaatatttggtcgcgataatgaactgcagcaagtgatggagttgcttggtatacctaaaaatgacacaggtgctcatttcaaacgcaagagagagagtaaaaatgtgtcaacaagcacatcagcatgcaaccaagatagtattcctgttttgccaataactggaattgggggtgttggaaagaccactttggcccaacatatctgccatgatcgacaagtaaagtctcattttgacctagtaatttggatttgtgtttcagatgactttgatgtgaagaggttaaccaaagaagccatacaatcctcttctataaaagaggctgataatttggatcatcttcagcatgttttgttggaagaagtgaggaacaagagattgttgattatacttgatgacgtgtgggatgatgccttgagggaaagcggacagtgttggaagaggttttgtgcacctttgacaaatgcgctattgggaagtatggtgttagtcaccactagatccccagtagttgctcatgaggtgaaaacaatggaacccatcttattagaaggattgaaggaagatgcattttggaatttcttcaaactatgcgcatttggatctgagagtgctaatactgatcctgagttagagtgtatcggttcaaaaatagtcccaaagttgaagggatcacctttagctgcgaaaacactgggacgtttattgagaatgtgccttgacacaacacattggaataacatactacacagtgaattatgggagctgagacaacagaatactgacattttgccagctcttcggttgagctacttgtatttaccgttccacttgaagagatgcttctcattctgtgctgtttacccaaaagatcacaaattcgaaaaggtcagtttagctgaaatttggattgcagaaggttttgtggaacctgaaggtagcactccaattctagatactggctgtcagtactttgaagaccttgtaaaccggtctttctttcagaaaattgatggcaaatatgtaatccatgatctgatgcatgacatggcacaactagtttcaaagcatgactgcttcatcttaaaagacaaggatgattttgataaagttccttcaagtgttcgtcatctattcatactctctagcacaaaattagattgtactcgcttgctgagcctacgtaagcacacaaagctgcgcactctactttgctacaggtctctacggaataaaactctagcttgtgttatggacagttggtgcagtgaactccagcatatgcgtgtgattttttgtgcctacacaaaggagcttccggagagtattgggaaattgaagcatctacggtaccttgaaatctctggggcttgtcctttcaaaagcctcccttcagagttatgccacctgtataatttgcagattttttcagctagaaaatgcaagttagaaagcttgccgagtgacttcagtaagttgagaaatttacggagatttgattcatgggcatttcacggtgatcccaagggtgaaagtcattttgatgcatctaatggacaggaagtaggaactatattgttgaagaatgtgaaccagatttttggaggtttgacgatagataatctcggtgcaataagcaaggatattgcagcaaaagctgaactaaataatatgagatatcttgataggctgaccttgaaatggtcttctaagggacaacaagaacagaatgagatagaggtgcttcaggtcctaattcctcccaccactctcaaacatctgaacatcatgggttatccaggtgaatctcttccaagatggtttcatcctcgcaacttaccaaccttgacatcccttgagtttgttgattgtcatggtcttggaaccatacctatatcgccgtgcatagacctgaatgagatatcaggggatggaaacaatactggcatccatggaatattctccgcattgactggcctaaccattaagtgttgtagtaatttatcaagcctcaaccaatttctacatccagcttatgtaccagccattaagagaataagcatagaatcctgtgaacagttagtttcactgccaattgacaggtttggtgaatttcattaccttgaagaattggaactgtcatattgcccaaaactgaatgattatcgaagcgtatccatacctaccctcaagaagctcaatctgagaaagtctgggaatctcccagtgaatattctgtgctcctcgctaacctccttgatattaaccaattttaaagagaaaaccattcccttgcatgtgtggagcagtaactttccagctttacaaaaattagatgtttcggattgtgggaaccttaaatctgttggagaatatgaatcatcagtcttcattgaccattctcagagagacagctttagggttgcaacattctcatcccttactgccctaaaaattgaaaagtgtagaagactggcaacccttggtgaccttctattgcctgagtatcaacctgccatggagaaaatttatgttggcttttgtagcgagcttttgtccctgccgggtgaaaggtttggaaaatattctgttctgaaggatctaactatttgtcattgtccaatgctcaagtggcataggggccttgttttaccatcatctctccaaaggctctccttagctagatgtggggatatctctccctgtgtacccagctgcctggagaaccttgcctccctcgtgtcactggagatcacctcttgctcacgtatagcatacattccatcttcactgtggagcagtagtctctcgtcactccagaatttgattattgtaaattgtgaccttgtatcaattggtggagcagatgcaattgagaaaataaacaaggtgaagatagcatactgtccaaagttgcaggaaatagagcaaccaatgagcagaggtggtctgtaggcttcatggtgagagcgtggattcaatctccgagtccttattcgtatgtagtactccctctgtccctaaatattacaccgttgattttttagcatatgtttaaccgttcgtcttatttaaaaacttttgtgaaatatgtaaaactatatgatatataaaagtatatttaacaatgaatcaagtgataggaaaataattaataatcacttaaatattttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaatatttagggacatagggagtatatgataactctggaaacttcccttcctgctcttaccgagattttctctttctacctgacctagaagagacaattgtgtccttagctagtttgcatcctatatgagtatatatcatcatcagctcgctgcacaagcaaaacttgttgtacatactgtttttccattaattacttgcctctaaaccttagccagatacagtatatccttaatctataataattacaaatactttagaaatagtataaaattaaacagcaaaagaacatgtatcattaacctattgtagtaacatagtattgttgaaactttaagcagcaaataagactgactaacactctacccaactgctgccggtatatattgggaagtttgaaactttcttttttctgttgagtgcactgtactgggaaatcttggagagctagttatcctttttaatgatcttgcatatcagtacagtgaactagtttacctacaattttcactgatgagatcctagattttttttcagggcttatcatggtgccaaacgaagtctgcaacacagtgctgacaggaacgcctgcagcgagctcaaaagttagaaatgacagcagatgccatttgacatcagctgaagggaataattgtgcacatagataccttgctgaagaggtcccaaaattatggtgctaaacatagtctgcgtggttgctgaaaacggagcatctgcaaatgagttccaaaattagaaatggaagcgaggtagcaagatactgataaaacgcaaagaaaccatcgatcctgatgaggctgccgcacagcagtattggtctgataggaatacttgatgagaagatgttctgtcatatagtgagcttctaactgtattttgttttgtcaactacgatgtagctataatccataaaggaatatatacatcatgcaatgatgagttagttctgtttaatcatactacgtatgttagcacgaatttctttttttttttttgtgtcaacatgcggtacaccattttaggcactaaactttttctgtgatctgtaatttgttgggtttttcagtgacaaaataggagaaactgaggctccccgtgtcattccgctccagggcgacacgagcggcgacgccacaaaccccaccgccaccccctccctccactcccccgcgtcgccgccacccgagtaa
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| CDS seq | atgtggaaagataaaactgtcagctttattaaggctatgacctcaagtatagttccctgtttctcatcgaattgggctaggtctaccatttcatatcttcacggtcgatggagccgcacttacgagcaaaagcttctagatgaagtatcacagttgcagagtggcctacaacgtcttagagacactcttcctgcaaagtatgatctcattgatcgagctgagtggatgagccacaaagattgtgtggccaagctccttccaaatcttaaggatgcgttgtatgatgctgatgatcttcttgatgagtttgtatggtatgaacaaaagatggttttggagggtaatgaactaagccaacctccgtttttgcacttctacgataatgtccttcaaggaagcttcaataaagtgaatgatatcatggaaaggttgaataatatttctagccaactggagaagatgggattggatgaagttactcatcgattcgacaaattactcaggccagagactagctctttcccaaatgaaagaagaatatttggtcgcgataatgaactgcagcaagtgatggagttgcttggtatacctaaaaatgacacaggtgctcatttcaaacgcaagagagagagtaaaaatgtgtcaacaagcacatcagcatgcaaccaagatagtattcctgttttgccaataactggaattgggggtgttggaaagaccactttggcccaacatatctgccatgatcgacaagtaaagtctcattttgacctagtaatttggatttgtgtttcagatgactttgatgtgaagaggttaaccaaagaagccatacaatcctcttctataaaagaggctgataatttggatcatcttcagcatgttttgttggaagaagtgaggaacaagagattgttgattatacttgatgacgtgtgggatgatgccttgagggaaagcggacagtgttggaagaggttttgtgcacctttgacaaatgcgctattgggaagtatggtgttagtcaccactagatccccagtagttgctcatgaggtgaaaacaatggaacccatcttattagaaggattgaaggaagatgcattttggaatttcttcaaactatgcgcatttggatctgagagtgctaatactgatcctgagttagagtgtatcggttcaaaaatagtcccaaagttgaagggatcacctttagctgcgaaaacactgggacgtttattgagaatgtgccttgacacaacacattggaataacatactacacagtgaattatgggagctgagacaacagaatactgacattttgccagctcttcggttgagctacttgtatttaccgttccacttgaagagatgcttctcattctgtgctgtttacccaaaagatcacaaattcgaaaaggtcagtttagctgaaatttggattgcagaaggttttgtggaacctgaaggtagcactccaattctagatactggctgtcagtactttgaagaccttgtaaaccggtctttctttcagaaaattgatggcaaatatgtaatccatgatctgatgcatgacatggcacaactagtttcaaagcatgactgcttcatcttaaaagacaaggatgattttgataaagttccttcaagtgttcgtcatctattcatactctctagcacaaaattagattgtactcgcttgctgagcctacgtaagcacacaaagctgcgcactctactttgctacaggtctctacggaataaaactctagcttgtgttatggacagttggtgcagtgaactccagcatatgcgtgtgattttttgtgcctacacaaaggagcttccggagagtattgggaaattgaagcatctacggtaccttgaaatctctggggcttgtcctttcaaaagcctcccttcagagttatgccacctgtataatttgcagattttttcagctagaaaatgcaagttagaaagcttgccgagtgacttcagtaagttgagaaatttacggagatttgattcatgggcatttcacggtgatcccaagggtgaaagtcattttgatgcatctaatggacaggaagtaggaactatattgttgaagaatgtgaaccagatttttggaggtttgacgatagataatctcggtgcaataagcaaggatattgcagcaaaagctgaactaaataatatgagatatcttgataggctgaccttgaaatggtcttctaagggacaacaagaacagaatgagatagaggtgcttcaggtcctaattcctcccaccactctcaaacatctgaacatcatgggttatccaggtgaatctcttccaagatggtttcatcctcgcaacttaccaaccttgacatcccttgagtttgttgattgtcatggtcttggaaccatacctatatcgccgtgcatagacctgaatgagatatcaggggatggaaacaatactggcatccatggaatattctccgcattgactggcctaaccattaagtgttgtagtaatttatcaagcctcaaccaatttctacatccagcttatgtaccagccattaagagaataagcatagaatcctgtgaacagttagtttcactgccaattgacaggtttggtgaatttcattaccttgaagaattggaactgtcatattgcccaaaactgaatgattatcgaagcgtatccatacctaccctcaagaagctcaatctgagaaagtctgggaatctcccagtgaatattctgtgctcctcgctaacctccttgatattaaccaattttaaagagaaaaccattcccttgcatgtgtggagcagtaactttccagctttacaaaaattagatgtttcggattgtgggaaccttaaatctgttggagaatatgaatcatcagtcttcattgaccattctcagagagacagctttagggttgcaacattctcatcccttactgccctaaaaattgaaaagtgtagaagactggcaacccttggtgaccttctattgcctgagtatcaacctgccatggagaaaatttatgttggcttttgtagcgagcttttgtccctgccgggtgaaaggtttggaaaatattctgttctgaaggatctaactatttgtcattgtccaatgctcaagtggcataggggccttgttttaccatcatctctccaaaggctctccttagctagatgtggggatatctctccctgtgtacccagctgcctggagaaccttgcctccctcgtgtcactggagatcacctcttgctcacgtatagcatacattccatcttcactgtggagcagtagtctctcgtcactccagaatttgattattgtaaattgtgaccttgtatcaattggtggagcagatgcaattgagaaaataaacaagaaatggaagcgaggtagcaagatactgataaaacgcaaagaaaccatcgatcctgatgaggctgccgcacagcagtattgtgacaaaataggagaaactgaggctccccgtgtcattccgctccagggcgacacgagcggcgacgccacaaaccccaccgccaccccctccctccactcccccgcgtcgccgccacccgagtaa
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| Protein seq | MWKDKTVSFIKAMTSSIVPCFSSNWARSTISYLHGRWSRTYEQKLLDEVSQLQSGLQRLRDTLPAKYDLIDRAEWMSHKDCVAKLLPNLKDALYDADDLLDEFVWYEQKMVLEGNELSQPPFLHFYDNVLQGSFNKVNDIMERLNNISSQLEKMGLDEVTHRFDKLLRPETSSFPNERRIFGRDNELQQVMELLGIPKNDTGAHFKRKRESKNVSTSTSACNQDSIPVLPITGIGGVGKTTLAQHICHDRQVKSHFDLVIWICVSDDFDVKRLTKEAIQSSSIKEADNLDHLQHVLLEEVRNKRLLIILDDVWDDALRESGQCWKRFCAPLTNALLGSMVLVTTRSPVVAHEVKTMEPILLEGLKEDAFWNFFKLCAFGSESANTDPELECIGSKIVPKLKGSPLAAKTLGRLLRMCLDTTHWNNILHSELWELRQQNTDILPALRLSYLYLPFHLKRCFSFCAVYPKDHKFEKVSLAEIWIAEGFVEPEGSTPILDTGCQYFEDLVNRSFFQKIDGKYVIHDLMHDMAQLVSKHDCFILKDKDDFDKVPSSVRHLFILSSTKLDCTRLLSLRKHTKLRTLLCYRSLRNKTLACVMDSWCSELQHMRVIFCAYTKELPESIGKLKHLRYLEISGACPFKSLPSELCHLYNLQIFSARKCKLESLPSDFSKLRNLRRFDSWAFHGDPKGESHFDASNGQEVGTILLKNVNQIFGGLTIDNLGAISKDIAAKAELNNMRYLDRLTLKWSSKGQQEQNEIEVLQVLIPPTTLKHLNIMGYPGESLPRWFHPRNLPTLTSLEFVDCHGLGTIPISPCIDLNEISGDGNNTGIHGIFSALTGLTIKCCSNLSSLNQFLHPAYVPAIKRISIESCEQLVSLPIDRFGEFHYLEELELSYCPKLNDYRSVSIPTLKKLNLRKSGNLPVNILCSSLTSLILTNFKEKTIPLHVWSSNFPALQKLDVSDCGNLKSVGEYESSVFIDHSQRDSFRVATFSSLTALKIEKCRRLATLGDLLLPEYQPAMEKIYVGFCSELLSLPGERFGKYSVLKDLTICHCPMLKWHRGLVLPSSLQRLSLARCGDISPCVPSCLENLASLVSLEITSCSRIAYIPSSLWSSSLSSLQNLIIVNCDLVSIGGADAIEKINKKWKRGSKILIKRKETIDPDEAAAQQYCDKIGETEAPRVIPLQGDTSGDATNPTATPSLHSPASPPPE |
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| Function | Putative disease resistance protein RGA1 [UniProtKB/Swiss-Prot:Q7XA42] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0012620 | OsLima_02g0012620.01 | Chr02 | 10832230 | 10837311 | + | NAM | ||
| CDS seq | atgtggaaagataaaactgtcagctttattaaggctatgacctcaagtatagttccctgtttctcatcgaattgggctaggtctaccatttcatatcttcacggtcgatggagccgcacttacgagcaaaagcttctagatgaagtatcacagttgcagagtggcctacaacgtcttagagacactcttcctgcaaagtatgatctcattgatcgagctgagtggatgagccacaaagattgtgtggccaagctccttccaaatcttaaggatgcgttgtatgatgctgatgatcttcttgatgagtttgtatggtatgaacaaaagatggttttggagggtaatgaactaagccaacctccgtttttgcacttctacgataatgtccttcaaggaagcttcaataaagtgaatgatatcatggaaaggttgaataatatttctagccaactggagaagatgggattggatgaagttactcatcgattcgacaaattactcaggccagagactagctctttcccaaatgaaagaagaatatttggtcgcgataatgaactgcagcaagtgatggagttgcttggtatacctaaaaatgacacaggtgctcatttcaaacgcaagagagagagtaaaaatgtgtcaacaagcacatcagcatgcaaccaagatagtattcctgttttgccaataactggaattgggggtgttggaaagaccactttggcccaacatatctgccatgatcgacaagtaaagtctcattttgacctagtaatttggatttgtgtttcagatgactttgatgtgaagaggttaaccaaagaagccatacaatcctcttctataaaagaggctgataatttggatcatcttcagcatgttttgttggaagaagtgaggaacaagagattgttgattatacttgatgacgtgtgggatgatgccttgagggaaagcggacagtgttggaagaggttttgtgcacctttgacaaatgcgctattgggaagtatggtgttagtcaccactagatccccagtagttgctcatgaggtgaaaacaatggaacccatcttattagaaggattgaaggaagatgcattttggaatttcttcaaactatgcgcatttggatctgagagtgctaatactgatcctgagttagagtgtatcggttcaaaaatagtcccaaagttgaagggatcacctttagctgcgaaaacactgggacgtttattgagaatgtgccttgacacaacacattggaataacatactacacagtgaattatgggagctgagacaacagaatactgacattttgccagctcttcggttgagctacttgtatttaccgttccacttgaagagatgcttctcattctgtgctgtttacccaaaagatcacaaattcgaaaaggtcagtttagctgaaatttggattgcagaaggttttgtggaacctgaaggtagcactccaattctagatactggctgtcagtactttgaagaccttgtaaaccggtctttctttcagaaaattgatggcaaatatgtaatccatgatctgatgcatgacatggcacaactagtttcaaagcatgactgcttcatcttaaaagacaaggatgattttgataaagttccttcaagtgttcgtcatctattcatactctctagcacaaaattagattgtactcgcttgctgagcctacgtaagcacacaaagctgcgcactctactttgctacaggtctctacggaataaaactctagcttgtgttatggacagttggtgcagtgaactccagcatatgcgtgtgattttttgtgcctacacaaaggagcttccggagagtattgggaaattgaagcatctacggtaccttgaaatctctggggcttgtcctttcaaaagcctcccttcagagttatgccacctgtataatttgcagattttttcagctagaaaatgcaagttagaaagcttgccgagtgacttcagtaagttgagaaatttacggagatttgattcatgggcatttcacggtgatcccaagggtgaaagtcattttgatgcatctaatggacaggaagtaggaactatattgttgaagaatgtgaaccagatttttggaggtttgacgatagataatctcggtgcaataagcaaggatattgcagcaaaagctgaactaaataatatgagatatcttgataggctgaccttgaaatggtcttctaagggacaacaagaacagaatgagatagaggtgcttcaggtcctaattcctcccaccactctcaaacatctgaacatcatgggttatccaggtgaatctcttccaagatggtttcatcctcgcaacttaccaaccttgacatcccttgagtttgttgattgtcatggtcttggaaccatacctatatcgccgtgcatagacctgaatgagatatcaggggatggaaacaatactggcatccatggaatattctccgcattgactggcctaaccattaagtgttgtagtaatttatcaagcctcaaccaatttctacatccagcttatgtaccagccattaagagaataagcatagaatcctgtgaacagttagtttcactgccaattgacaggtttggtgaatttcattaccttgaagaattggaactgtcatattgcccaaaactgaatgattatcgaagcgtatccatacctaccctcaagaagctcaatctgagaaagtctgggaatctcccagtgaatattctgtgctcctcgctaacctccttgatattaaccaattttaaagagaaaaccattcccttgcatgtgtggagcagtaactttccagctttacaaaaattagatgtttcggattgtgggaaccttaaatctgttggagaatatgaatcatcagtcttcattgaccattctcagagagacagctttagggttgcaacattctcatcccttactgccctaaaaattgaaaagtgtagaagactggcaacccttggtgaccttctattgcctgagtatcaacctgccatggagaaaatttatgttggcttttgtagcgagcttttgtccctgccgggtgaaaggtttggaaaatattctgttctgaaggatctaactatttgtcattgtccaatgctcaagtggcataggggccttgttttaccatcatctctccaaaggctctccttagctagatgtggggatatctctccctgtgtacccagctgcctggagaaccttgcctccctcgtgtcactggagatcacctcttgctcacgtatagcatacattccatcttcactgtggagcagtagtctctcgtcactccagaatttgattattgtaaattgtgaccttgtatcaattggtggagcagatgcaattgagaaaataaacaagaaatggaagcgaggtagcaagatactgataaaacgcaaagaaaccatcgatcctgatgaggctgccgcacagcagtattgtgacaaaataggagaaactgaggctccccgtgtcattccgctccagggcgacacgagcggcgacgccacaaaccccaccgccaccccctccctccactcccccgcgtcgccgccacccgagtaa
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| Protein seq | MWKDKTVSFIKAMTSSIVPCFSSNWARSTISYLHGRWSRTYEQKLLDEVSQLQSGLQRLRDTLPAKYDLIDRAEWMSHKDCVAKLLPNLKDALYDADDLLDEFVWYEQKMVLEGNELSQPPFLHFYDNVLQGSFNKVNDIMERLNNISSQLEKMGLDEVTHRFDKLLRPETSSFPNERRIFGRDNELQQVMELLGIPKNDTGAHFKRKRESKNVSTSTSACNQDSIPVLPITGIGGVGKTTLAQHICHDRQVKSHFDLVIWICVSDDFDVKRLTKEAIQSSSIKEADNLDHLQHVLLEEVRNKRLLIILDDVWDDALRESGQCWKRFCAPLTNALLGSMVLVTTRSPVVAHEVKTMEPILLEGLKEDAFWNFFKLCAFGSESANTDPELECIGSKIVPKLKGSPLAAKTLGRLLRMCLDTTHWNNILHSELWELRQQNTDILPALRLSYLYLPFHLKRCFSFCAVYPKDHKFEKVSLAEIWIAEGFVEPEGSTPILDTGCQYFEDLVNRSFFQKIDGKYVIHDLMHDMAQLVSKHDCFILKDKDDFDKVPSSVRHLFILSSTKLDCTRLLSLRKHTKLRTLLCYRSLRNKTLACVMDSWCSELQHMRVIFCAYTKELPESIGKLKHLRYLEISGACPFKSLPSELCHLYNLQIFSARKCKLESLPSDFSKLRNLRRFDSWAFHGDPKGESHFDASNGQEVGTILLKNVNQIFGGLTIDNLGAISKDIAAKAELNNMRYLDRLTLKWSSKGQQEQNEIEVLQVLIPPTTLKHLNIMGYPGESLPRWFHPRNLPTLTSLEFVDCHGLGTIPISPCIDLNEISGDGNNTGIHGIFSALTGLTIKCCSNLSSLNQFLHPAYVPAIKRISIESCEQLVSLPIDRFGEFHYLEELELSYCPKLNDYRSVSIPTLKKLNLRKSGNLPVNILCSSLTSLILTNFKEKTIPLHVWSSNFPALQKLDVSDCGNLKSVGEYESSVFIDHSQRDSFRVATFSSLTALKIEKCRRLATLGDLLLPEYQPAMEKIYVGFCSELLSLPGERFGKYSVLKDLTICHCPMLKWHRGLVLPSSLQRLSLARCGDISPCVPSCLENLASLVSLEITSCSRIAYIPSSLWSSSLSSLQNLIIVNCDLVSIGGADAIEKINKKWKRGSKILIKRKETIDPDEAAAQQYCDKIGETEAPRVIPLQGDTSGDATNPTATPSLHSPASPPPE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.110557 | 0.274318 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0282000 | SBH | 0.695014 | 0.769451 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g18080 | SBH | 0.470005 | 0.517520 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0282000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0012440 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0012610 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0012460 | SBH | 0.0 | 0.0 | 0.185471 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0012280 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0012180 | SBH | 0.0 | 1.912112 | 0.635613 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0163500 | RBH | 0.289234 | 27.807004 | 4.1507255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0012060 | RBH | 0.064375 | 0.426873 | 0.041000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0175400 | SBH | 0.234382 | 0.59623 | 0.059391 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0012210 | RBH | 0.0 | 2.002438 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0012600 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0012490 | RBH | 0.000000 | 0.476903 | 0.253674 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0012230 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G012600 | SBH | 0.088130 | 0.119195 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0012370 | SBH | 0.133571 | 0.0 | 0.569775 |
