Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_02g0009770 | OGI:02021150 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr02:7438371-7441784 | ||||||||
| Gene Symbol | RLCK70, OsRLCK70, RLK5, OsRLK5, - | ||||||||||
| DNA seq | aatatccaaattaaacaatacaatccgaagaatcatcgatgtcaaacacgcctttagctactacgccatcgctatgtgttccgctatgatcaaactgcatgagccggtggagaacatcattcatcggaggcctcgacgccggctcctcactggtgcaaaccacgccgagctcgaacacggccaccatgtcatccaggtaggaaggatcctgaatctcgccgtcgaccaagtcggcgaccgggccaccattgttgtaccgcttcgatgcccatttggccaagcagctgccagactccgtgccaccatcttccggccctcggccggtggccagctctagcagcaccacaccgaaactgtatacgtccaccttaacgcttacctttgacctgtatacgtactctgcaataagcaaattaatacaccaaatgtatgcacacctcaaattcagacagattataatggaacattatgatattctctatgtgccctctagtgtagattgcgacaaaaataaatgagtattttaataaaccctttgctggaagagttctaatacaaatagaaatagtagtaggaattttttagccgaaattggtcaactataccctatcgcttctacttccaataattaattaaggtgataaagatatgacgacttcgcttaaaaaacatataagttgaaatcatttctacaacagtagagagcatgataaaagttatataaatacagtagatacctggagcaatgtagccaaaggtgccacagacagcggaggccgattcggactcaccagacttggcaaggatacgagcaagcccaaaatcagcgatcttggctctgaactcgcggtcgagaagaatgttgctacacttgacatcgcggtggatgaccggctgcacaaattcctcatgcatgtagctgaggcctctagctacatcaatggcgatggccaccctcgtcggccagtccaacggcccgcttttgccggctcgcttgtagcggtgcagccattgatcgaggctcccgttctccatgtgctcgtagacgagcagcttcgtctcctggctagagatgcagcagagaaggtcgacgatgttgctatgccggaggtcacccaacgtcctcacctccgactcaaactccttgtcgaggttcgtgtccagcttgctggtgttgccgatcctcttcacggccaccgtccttggggtacagccaccgccatgtcgtcccgccttgatgtcgccgccaaggtggatacggtacactttccctgagccacccctaccaatcacattgcactcgctgatattgctgacgatgtcatgctcggtgaaatctatcgttctgaattgtgtcatcttccacgacgtgacatcttgtggacctttcttgcgcctgaggaggagaagccatccggtgactaatatggctagagcaatgcaaggaagaatgaccaatatggctcttatgctcagtgcaaggtgatcatggctcatgctttgactccagggacatgtcctgatgtgcatgccggattctgattgacaacagagactagggttatccaagaagctgtcctcgtatgctagcgtttgcaatgctgctgggacctcaccggagagctggttggatgagaggttgagaaagttgacatgtagatcattgaattcctgaggtatgtgaccagtgagcttgttgttcgaaaggtcaagaatgtttagatccattaacccaagtactgcagggatctctccggaaatctggttgctgctaaggttgagggaggtcagctttgtcaaagattgcatagatggtggaatcaagccggacaacctattcccagcaaggtccagctcggtgagattagcgaaccttgacatgtcatctggtagtgctccagagaactggttgttctccgccatgaagttcttcagggcgatggcggcggatgggagggcaccggagaacatattgttccctatctcaattctagtgatgttgaatgatatctcactcggtagattgccggtgaagttgttgttgtaaatcatgatgttgatgagctttgcgaatgaccatatattctcagggaagtccccgacaaagtggttgttgtatgccatgatgttgttgatggtgtcgcagtccccaaggttcattgggaacacgccggagaagctattgttgaacaccacaaggtcgtagagctttttgttgaagcagagcgtatcaggcaactcaccagacaggttgttgttgcacacctcaaaatttcccaattctgaatatttcccaagctcagggggtaagggcccggagagcttattattgaagagccgaatgtcggtaaggtttggaagcatactgacaccttttggaatggatccagtgaggttgttgtagtacaagtatagcagtctcaaattcttcaagtttgcaatgtcctctggtattgatccggtgagcttgttcatggatagatcaagctcctgcatattgagtgttgagatgtcaggaccaatctcgccactgaaattgcttgcaaagaggtacaacatctcgagcttctgaagcttccatatccacttcgggatctttccttgcatcttattctttgacaaatccaatagtatgagctccttcaacgctgacagagcatcagggatgtcaccagtcagattcatccaggataaccacagatatgtcagctttgtaagcttgctaaactcattcggaattggacccggcataaacgggttggatgccaacgtcagtatctcaagctccacaaggcctccaatggaagcacctggatagctcccattaaagctgttagtgtcaaggaccagtgacttgagcttcaagaacctggcaatagccgagggaacatcaccaataaaataattgcttgacaagttgaggtgctgcatccccaaggacaacttgtcgatgttgctaggaaggcttccggtcaattcattgtttgacaggtcaaggaattgcaaagctgagcaattgtagagcactgtggggaaatcaccggtgaggttgttgtaagagaggtctaagtacttcaggttcttaaggctacaaatagaagctgggattggattggctatttggaagctctggaaggagagggatgtaacctggccatctgtacaagcaactcctacccaatcacagtaaccaaaagaattagaacttctcacctcccatgagctgaatgcagcagggctaccccaatgccgcttgatggtcagaagcgtttggagctcgccgccgtcatcaagctccgcactggagccggagaagaagaggagcagtagtaacaaaagattatcggtactattggtcattttttgttactagttacgagtggtgatgcttgtttaatgtggacttgtgagact
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| CDS seq | atgaccaatagtaccgataatcttttgttactactgctcctcttcttctccggctccagtgcggagcttgatgacggcggcgagctccaaacgcttctgaccatcaagcggcattggggtagccctgctgcattcagctcatgggaggtgagaagttctaattcttttggttactgtgattgggtaggagttgcttgtacagatggccaggttacatccctctccttccagagcttccaaatagccaatccaatcccagcttctatttgtagccttaagaacctgaagtacttagacctctcttacaacaacctcaccggtgatttccccacagtgctctacaattgctcagctttgcaattccttgacctgtcaaacaatgaattgaccggaagccttcctagcaacatcgacaagttgtccttggggatgcagcacctcaacttgtcaagcaattattttattggtgatgttccctcggctattgccaggttcttgaagctcaagtcactggtccttgacactaacagctttaatgggagctatccaggtgcttccattggaggccttgtggagcttgagatactgacgttggcatccaacccgtttatgccgggtccaattccgaatgagtttagcaagcttacaaagctgacatatctgtggttatcctggatgaatctgactggtgacatccctgatgctctgtcagcgttgaaggagctcatactattggatttgtcaaagaataagatgcaaggaaagatcccgaagtggatatggaagcttcagaagctcgagatgttgtacctctttgcaagcaatttcagtggcgagattggtcctgacatctcaacactcaatatgcaggagcttgatctatccatgaacaagctcaccggatcaataccagaggacattgcaaacttgaagaatttgagactgctatacttgtactacaacaacctcactggatccattccaaaaggtgtcagtatgcttccaaaccttaccgacattcggctcttcaataataagctctccgggcccttaccccctgagcttgggaaatattcagaattgggaaattttgaggtgtgcaacaacaacctgtctggtgagttgcctgatacgctctgcttcaacaaaaagctctacgaccttgtggtgttcaacaatagcttctccggcgtgttcccaatgaaccttggggactgcgacaccatcaacaacatcatggcatacaacaaccactttgtcggggacttccctgagaatatatggtcattcgcaaagctcatcaacatcatgatttacaacaacaacttcaccggcaatctaccgagtgagatatcattcaacatcactagaattgagatagggaacaatatgttctccggtgccctcccatccgccgccatcgccctgaagaacttcatggcggagaacaaccagttctctggagcactaccagatgacatgtcaaggttcgctaatctcaccgagctggaccttgctgggaataggcgcaagaaaggtccacaagatgtcacgtcgtggaagatgacacaattcagaacgatagatttcaccgagcatgacatcgtcagcaatatcagcgagtgcaatgtgattggtaggggtggctcagggaaagtgtaccgtatccaccttggcggcgacatcaaggcgggacgacatggcggtggctgtaccccaaggacggtggccgtgaagaggatcggcaacaccagcaagctggacacgaacctcgacaaggagtttgagtcggaggtgaggacgttgggtgacctccggcatagcaacatcgtcgaccttctctgctgcatctctagccaggagacgaagctgctcgtctacgagcacatggagaacgggagcctcgatcaatggctgcaccgctacaagcgagccggcaaaagcgggccgttggactggccgacgagggtaagcgttaaggtggacgtatacagtttcggtgtggtgctgctagagctggccaccggccgagggccggaagatggtggcacggagtctggcagctgcttggccaaatgggcatcgaagcggtacaacaatggtggcccggtcgccgacttggtcgacggcgagattcaggatccttcctacctggatgacatggtggccgtgttcgagctcggcgtggtttgcaccagtgaggagccggcgtcgaggcctccgatgaatgatgttctccaccggctcatgcagtttgatcatagcggaacacatagcgatggcgtagtagctaaaggcgtgtttgacatcgatgattcttcggattgtattgtttaa
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| Protein seq | MTNSTDNLLLLLLLFFSGSSAELDDGGELQTLLTIKRHWGSPAAFSSWEVRSSNSFGYCDWVGVACTDGQVTSLSFQSFQIANPIPASICSLKNLKYLDLSYNNLTGDFPTVLYNCSALQFLDLSNNELTGSLPSNIDKLSLGMQHLNLSSNYFIGDVPSAIARFLKLKSLVLDTNSFNGSYPGASIGGLVELEILTLASNPFMPGPIPNEFSKLTKLTYLWLSWMNLTGDIPDALSALKELILLDLSKNKMQGKIPKWIWKLQKLEMLYLFASNFSGEIGPDISTLNMQELDLSMNKLTGSIPEDIANLKNLRLLYLYYNNLTGSIPKGVSMLPNLTDIRLFNNKLSGPLPPELGKYSELGNFEVCNNNLSGELPDTLCFNKKLYDLVVFNNSFSGVFPMNLGDCDTINNIMAYNNHFVGDFPENIWSFAKLINIMIYNNNFTGNLPSEISFNITRIEIGNNMFSGALPSAAIALKNFMAENNQFSGALPDDMSRFANLTELDLAGNRRKKGPQDVTSWKMTQFRTIDFTEHDIVSNISECNVIGRGGSGKVYRIHLGGDIKAGRHGGGCTPRTVAVKRIGNTSKLDTNLDKEFESEVRTLGDLRHSNIVDLLCCISSQETKLLVYEHMENGSLDQWLHRYKRAGKSGPLDWPTRVSVKVDVYSFGVVLLELATGRGPEDGGTESGSCLAKWASKRYNNGGPVADLVDGEIQDPSYLDDMVAVFELGVVCTSEEPASRPPMNDVLHRLMQFDHSGTHSDGVVAKGVFDIDDSSDCIV |
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| Function | Receptor-like protein 52 [UniProtKB/Swiss-Prot:Q7FZR1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_02g0009770 | OsLima_02g0009770.01 | Chr02 | 7438371 | 7441784 | - | NAM | ||
| CDS seq | atgaccaatagtaccgataatcttttgttactactgctcctcttcttctccggctccagtgcggagcttgatgacggcggcgagctccaaacgcttctgaccatcaagcggcattggggtagccctgctgcattcagctcatgggaggtgagaagttctaattcttttggttactgtgattgggtaggagttgcttgtacagatggccaggttacatccctctccttccagagcttccaaatagccaatccaatcccagcttctatttgtagccttaagaacctgaagtacttagacctctcttacaacaacctcaccggtgatttccccacagtgctctacaattgctcagctttgcaattccttgacctgtcaaacaatgaattgaccggaagccttcctagcaacatcgacaagttgtccttggggatgcagcacctcaacttgtcaagcaattattttattggtgatgttccctcggctattgccaggttcttgaagctcaagtcactggtccttgacactaacagctttaatgggagctatccaggtgcttccattggaggccttgtggagcttgagatactgacgttggcatccaacccgtttatgccgggtccaattccgaatgagtttagcaagcttacaaagctgacatatctgtggttatcctggatgaatctgactggtgacatccctgatgctctgtcagcgttgaaggagctcatactattggatttgtcaaagaataagatgcaaggaaagatcccgaagtggatatggaagcttcagaagctcgagatgttgtacctctttgcaagcaatttcagtggcgagattggtcctgacatctcaacactcaatatgcaggagcttgatctatccatgaacaagctcaccggatcaataccagaggacattgcaaacttgaagaatttgagactgctatacttgtactacaacaacctcactggatccattccaaaaggtgtcagtatgcttccaaaccttaccgacattcggctcttcaataataagctctccgggcccttaccccctgagcttgggaaatattcagaattgggaaattttgaggtgtgcaacaacaacctgtctggtgagttgcctgatacgctctgcttcaacaaaaagctctacgaccttgtggtgttcaacaatagcttctccggcgtgttcccaatgaaccttggggactgcgacaccatcaacaacatcatggcatacaacaaccactttgtcggggacttccctgagaatatatggtcattcgcaaagctcatcaacatcatgatttacaacaacaacttcaccggcaatctaccgagtgagatatcattcaacatcactagaattgagatagggaacaatatgttctccggtgccctcccatccgccgccatcgccctgaagaacttcatggcggagaacaaccagttctctggagcactaccagatgacatgtcaaggttcgctaatctcaccgagctggaccttgctgggaataggcgcaagaaaggtccacaagatgtcacgtcgtggaagatgacacaattcagaacgatagatttcaccgagcatgacatcgtcagcaatatcagcgagtgcaatgtgattggtaggggtggctcagggaaagtgtaccgtatccaccttggcggcgacatcaaggcgggacgacatggcggtggctgtaccccaaggacggtggccgtgaagaggatcggcaacaccagcaagctggacacgaacctcgacaaggagtttgagtcggaggtgaggacgttgggtgacctccggcatagcaacatcgtcgaccttctctgctgcatctctagccaggagacgaagctgctcgtctacgagcacatggagaacgggagcctcgatcaatggctgcaccgctacaagcgagccggcaaaagcgggccgttggactggccgacgagggtaagcgttaaggtggacgtatacagtttcggtgtggtgctgctagagctggccaccggccgagggccggaagatggtggcacggagtctggcagctgcttggccaaatgggcatcgaagcggtacaacaatggtggcccggtcgccgacttggtcgacggcgagattcaggatccttcctacctggatgacatggtggccgtgttcgagctcggcgtggtttgcaccagtgaggagccggcgtcgaggcctccgatgaatgatgttctccaccggctcatgcagtttgatcatagcggaacacatagcgatggcgtagtagctaaaggcgtgtttgacatcgatgattcttcggattgtattgtttaa
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| Protein seq | MTNSTDNLLLLLLLFFSGSSAELDDGGELQTLLTIKRHWGSPAAFSSWEVRSSNSFGYCDWVGVACTDGQVTSLSFQSFQIANPIPASICSLKNLKYLDLSYNNLTGDFPTVLYNCSALQFLDLSNNELTGSLPSNIDKLSLGMQHLNLSSNYFIGDVPSAIARFLKLKSLVLDTNSFNGSYPGASIGGLVELEILTLASNPFMPGPIPNEFSKLTKLTYLWLSWMNLTGDIPDALSALKELILLDLSKNKMQGKIPKWIWKLQKLEMLYLFASNFSGEIGPDISTLNMQELDLSMNKLTGSIPEDIANLKNLRLLYLYYNNLTGSIPKGVSMLPNLTDIRLFNNKLSGPLPPELGKYSELGNFEVCNNNLSGELPDTLCFNKKLYDLVVFNNSFSGVFPMNLGDCDTINNIMAYNNHFVGDFPENIWSFAKLINIMIYNNNFTGNLPSEISFNITRIEIGNNMFSGALPSAAIALKNFMAENNQFSGALPDDMSRFANLTELDLAGNRRKKGPQDVTSWKMTQFRTIDFTEHDIVSNISECNVIGRGGSGKVYRIHLGGDIKAGRHGGGCTPRTVAVKRIGNTSKLDTNLDKEFESEVRTLGDLRHSNIVDLLCCISSQETKLLVYEHMENGSLDQWLHRYKRAGKSGPLDWPTRVSVKVDVYSFGVVLLELATGRGPEDGGTESGSCLAKWASKRYNNGGPVADLVDGEIQDPSYLDDMVAVFELGVVCTSEEPASRPPMNDVLHRLMQFDHSGTHSDGVVAKGVFDIDDSSDCIV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0227700 | RBH | 0.225641 | 0.312676 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g13430 | RBH | 0.152590 | 0.210301 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0227700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009590 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0009540 | RBH | 0.304762 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009370 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009510 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0120000 | RBH | 0.0817085 | 0.1032915 | 0.00787 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009310 | RBH | 0.0 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0122600 | RBH | 0.4183335 | 0.635345 | 0.011045 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009750 | SBH | 0.049210 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0009410 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009750 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009750 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009460 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009670 | RBH | 0.078277 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0009470 | RBH | 0.000000 | 1.650543 | 0.0 |
