Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_02g0008700 OGI:02001240 | 16/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) Chr02:6423221-6426750
Gene Symbol TMS10, OsSERK4, OsSERL9, OsSERK2, OsBAK1-5, OsTMS10, SERK4, SERL9, SERK2, BAK1-5, OsBAK1, BAK1
DNA seq

tcacactacttttcctccactggaaagctcaaggaatgcttgcttgatggagtgtagttcagtggaaacttgtgccatccctaaccggtcttttggtgatgccatggagcacatgagggccaccttaaccaatgggaggacacaactttgcatcagttcggagtttccaccatccaaatcattgtgtagcatgttggggtctaaaatctcagttactctgtggggaaatgcagcatccacgcgatcgtggaggctcaaaccatcattgaatttttcatcagttggacgctttccagttaatatctctaacaacagcactccatagctgtagacatcacccttcattgatatttgcccacccattccgtactctgcattttcatttgaaaacataagaaaggtgaatggaggaaaactacaacaatccatgtaacattggataagttaataatatggctgaagcatacaggtcaataaatcagtataagtttccaatttctctcacctggtgcaatatatccaatggatccttttaagtcagccaaacttgtagagttaccaggcgctgctgttgaattagcactcataaatcttgccaacccaaagtcactgacatatgcagtcatttcaagatccaaaataacattgcttggtttgatgtcacaatgtattagtggggatacacactggttgtgaagataatctaaagcgtatgcaatgtccaaggctaagctaatcctttcacccaaagttaggaatctctttttaccatgcccatggtcctctggatgtagccacatttccagacttccatttggcatatactgaaagcaaagtgctttaaaatcatagccatttggatcaatcgtagagcataaagtaatgattttgacaagatttcgatggcgaatatatcttaatgcctcgcactccgcattgaagcttgtgggtgctccgtacttgttaagatcaaaaaccttaatagcaactggattggtctcaaacggcaacatgcccttgtaaacagccccaaaggatcccaaaccaaccaaatttgtgggagagaactcatctgttgctttggcaatatcttcatatgatatcttcctcatgttcacactggattgttgcaaagatggtttttgttttcttctcttgatgagaacagccattaaacataacaatgaaattacaacagacactgcgattggaattactattttcaaaatagtagacttgtgtttactttgtgatcctaattcagagcaaaggggcaggctataccctggatcattcgcacacaatctgtagtttccgtccaagataaccctgctagcattaccaaagacaccatttgatggtattggcccttcaaagtcattgaatgaaaggttgagtttctgcaaagaacttaagagagtgagcaactctggaacttttcctgacaagctgttacgagagagatccagctccttgatgctttttaagttcatgaaagattgtggaatgcttccagtaagaaggttcccttccatgtgaaggtattccaaaagcacacacttccctagagtggacggtatttccccggtcaagcgattgtttgaaatactgatgcttccaagatttatgaggttgccaatttctagtggtatgggcccagcaaacaaattgtgggacaagtccaaactttgtgacagggaagaaatgttgaagacctcacttggcaggcttccgctgaatgaattgtgggacaaatcaagcttctctaattgtctccactgccctaagtttgaaggtatgctcccgttgaagttgttcccatctagatgaaactcggttagttgggcaaggttgccaatagaatcaggaataaggcctgagaggttattttgtgccaagcttagaaccagtaagttgctaagatttccaatggtaggtgggatgctcccactaaacatattctcatccaaatacagaacactgagactcttaagattaccaatctctgatggaattgtcccagaaagtctgttttgcctgagccacaaccagttgagctgtgagggaagattaccgactgagctaggcaaggttccttggagaaaatttgcatccaaggccaactttttcagttgagtgcagtttgcaagggatgagaggaagctccagtcccctgcttcaagctggttgtatccaagatcaaggtcctgcaagtttggcaaggatccaaaagatggcactataccagtgagaccagcagcagcaagataaaccatttctagcttggacatattgcgaagagaagctgggatcggcccatttaactgtgttgttgaaaggattaaggcttcaaggtttggaagtctgttgcctatatctggtggtagttggccgatgagtgagttattggccatgctaagatatttcaaagatgatatgttgaaaatagcctgtggcacatgaccagacaaattgttgtatgtgagaactagcctctctagggttgggatcttacttaggctctcagggatgctccccaccaagttatttgcttttaaagaaacatgaaccaaggaagaaaggttgcccagtgaggctggtatccctcctgtgagtttattctgctctaaagtaaggtattgaataggtgcagcaattgctgtaataggtggtatggaaccaactaatttgttacggtccaggtaaatggttgtcaacgtggagctgttgaagagggctggagggatctcccctgtaagactattttgcgtgagcctaagcacttgaagggatgagctatttgccaagaactctgggattcctcctgtgagctgattgcccccaagatcaacatatacaaaagacgagctactgcccaacaatggtggtatgccacctctgagggcgttgttagagagatccaaagttttcagctcaggaagcgtcccaaatccagtgggtatactgccttcaagcttgttgttgtatagtataacttgctggaggtgagtgcattgggttaagctttgtggtatctcaccttggagggagttgttcgataagccgagtaccttgagattgctgcatgaggacagctcatctggaatacggccttcaagagagttgatgctcaagttcaggtagctgatttgtctcaagcgtctgagctcacttggaatttttccaaggaacgcgtttcttgataagtcgaggcttgcgatggagctcagattgccgatgcaaggtggtattgaaccactgaggcctttggagctgacgttgagtgctatgactcggagttgggtctgggtgttgttgcatgaaacaccctgccagttgcagaagttctgggaagtgttgctccatgagcttaaggatccgtttggatcagagatttgagacttgaagcagagcagggcttctctatcagtatcagtgtcatcgctgattgctaatggcagagagcatgagacgatgaaaacagccaagagtggaatgaattttgggcatggagcaaacaagcggatcat

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CDS seq

atgatccgcttgtttgctccatgcccaaaattcattccactcttggctgttttcatcgtctcatgctctctgccattagcaatcagcgatgacactgatactgatagagaagccctgctctgcttcaagtctcaaatctctgatccaaacggatccttaagctcatggagcaacacttcccagaacttctgcaactggcagggtgtttcatgcaacaacacccagacccaactccgagtcatagcactcaacgtcagctccaaaggcctcagtggttcaataccaccttgcatcggcaatctgagctccatcgcaagcctcgacttatcaagaaacgcgttccttggaaaaattccaagtgagctcagacgcttgagacaaatcagctacctgaacttgagcatcaactctcttgaaggccgtattccagatgagctgtcctcatgcagcaatctcaaggtactcggcttatcgaacaactccctccaaggtgagataccacaaagcttaacccaatgcactcacctccagcaagttatactatacaacaacaagcttgaaggcagtatacccactggatttgggacgcttcctgagctgaaaactttggatctctctaacaacgccctcagaggtggcataccaccattgttgggcagtagctcgtcttttgtatatgttgatcttgggggcaatcagctcacaggaggaatcccagagttcttggcaaatagctcatcccttcaagtgcttaggctcacgcaaaatagtcttacaggggagatccctccagccctcttcaacagctccacgttgacaaccatttacctggaccgtaacaaattagttggttccataccacctattacagcaattgctgcacctattcaataccttactttagagcagaataaactcacaggagggataccagcctcactgggcaacctttcttccttggttcatgtttctttaaaagcaaataacttggtggggagcatccctgagagcctaagtaagatcccaaccctagagaggctagttctcacatacaacaatttgtctggtcatgtgccacaggctattttcaacatatcatctttgaaatatcttagcatggccaataactcactcatcggccaactaccaccagatataggcaacagacttccaaaccttgaagccttaatcctttcaacaacacagttaaatgggccgatcccagcttctcttcgcaatatgtccaagctagaaatggtttatcttgctgctgctggtctcactggtatagtgccatcttttggatccttgccaaacttgcaggaccttgatcttggatacaaccagcttgaagcaggggactggagcttcctctcatcccttgcaaactgcactcaactgaaaaagttggccttggatgcaaattttctccaaggaaccttgcctagctcagtcggtaatcttccctcacagctcaactggttgtggctcaggcaaaacagactttctgggacaattccatcagagattggtaatcttaagagtctcagtgttctgtatttggatgagaatatgtttagtgggagcatcccacctaccattggaaatcttagcaacttactggttctaagcttggcacaaaataacctctcaggccttattcctgattctattggcaaccttgcccaactaaccgagtttcatctagatgggaacaacttcaacgggagcataccttcaaacttagggcagtggagacaattagagaagcttgatttgtcccacaattcattcagcggaagcctgccaagtgaggtcttcaacatttcttccctgtcacaaagtttggacttgtcccacaatttgtttgctgggcccataccactagaaattggcaacctcataaatcttggaagcatcagtatttcaaacaatcgcttgaccggggaaataccgtccactctagggaagtgtgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagctggatctctctcgtaacagcttgtcaggaaaagttccagagttgctcactctcttaagttctttgcagaaactcaacctttcattcaatgactttgaagggccaataccatcaaatggtgtctttggtaatgctagcagggttatcttggacggaaactacagattgtgtgcgaatgatccagggtatagcctgcccctttgctctgaattaggatcacaaagtaaacacaagtctactattttgaaaatagtaattccaatcgcagtgtctgttgtaatttcattgttatgtttaatggctgttctcatcaagagaagaaaacaaaaaccatctttgcaacaatccagtgtgaacatgaggaagatatcatatgaagatattgccaaagcaacagatgagttctctcccacaaatttggttggtttgggatcctttggggctgtttacaagggcatgttgccgtttgagaccaatccagttgctattaaggtttttgatcttaacaagtacggagcacccacaagcttcaatgcggagtgcgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattactttatgctctacgattgatccaaatggctatgattttaaagcactttgctttcagtatatgccaaatggaagtctggaaatgtggctacatccagaggaccatgggcatggtaaaaagagattcctaactttgggtgaaaggattagcttagccttggacattgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatcaaaccaagcaatgttattttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgagtgctaattcaacagcagcgcctggtaactctacaagtttggctgacttaaaaggatccattggatatattgcaccagagtacggaatgggtgggcaaatatcaatgaagggtgatgtctacagctatggagtgctgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatggtttgagcctccacgatcgcgtggatgctgcatttccccacagagtaactgagattttagaccccaacatgctacacaatgatttggatggtggaaactccgaactgatgcaaagttgtgtcctcccattggttaaggtggccctcatgtgctccatggcatcaccaaaagaccggttagggatggcacaagtttccactgaactacactccatcaagcaagcattccttgagctttccagtggaggaaaagtagtgtga

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Protein seq

MIRLFAPCPKFIPLLAVFIVSCSLPLAISDDTDTDREALLCFKSQISDPNGSLSSWSNTSQNFCNWQGVSCNNTQTQLRVIALNVSSKGLSGSIPPCIGNLSSIASLDLSRNAFLGKIPSELRRLRQISYLNLSINSLEGRIPDELSSCSNLKVLGLSNNSLQGEIPQSLTQCTHLQQVILYNNKLEGSIPTGFGTLPELKTLDLSNNALRGGIPPLLGSSSSFVYVDLGGNQLTGGIPEFLANSSSLQVLRLTQNSLTGEIPPALFNSSTLTTIYLDRNKLVGSIPPITAIAAPIQYLTLEQNKLTGGIPASLGNLSSLVHVSLKANNLVGSIPESLSKIPTLERLVLTYNNLSGHVPQAIFNISSLKYLSMANNSLIGQLPPDIGNRLPNLEALILSTTQLNGPIPASLRNMSKLEMVYLAAAGLTGIVPSFGSLPNLQDLDLGYNQLEAGDWSFLSSLANCTQLKKLALDANFLQGTLPSSVGNLPSQLNWLWLRQNRLSGTIPSEIGNLKSLSVLYLDENMFSGSIPPTIGNLSNLLVLSLAQNNLSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDLSHNSFSGSLPSEVFNISSLSQSLDLSHNLFAGPIPLEIGNLINLGSISISNNRLTGEIPSTLGKCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPELLTLLSSLQKLNLSFNDFEGPIPSNGVFGNASRVILDGNYRLCANDPGYSLPLCSELGSQSKHKSTILKIVIPIAVSVVISLLCLMAVLIKRRKQKPSLQQSSVNMRKISYEDIAKATDEFSPTNLVGLGSFGAVYKGMLPFETNPVAIKVFDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYDFKALCFQYMPNGSLEMWLHPEDHGHGKKRFLTLGERISLALDIAYALDYLHNQCVSPLIHCDIKPSNVILDLEMTAYVSDFGLARFMSANSTAAPGNSTSLADLKGSIGYIAPEYGMGGQISMKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTELHSIKQAFLELSSGGKVV

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_02g0008700 OsLima_02g0008700.01 Chr02 6423221 6426750 - NAM
CDS seq

atgatccgcttgtttgctccatgcccaaaattcattccactcttggctgttttcatcgtctcatgctctctgccattagcaatcagcgatgacactgatactgatagagaagccctgctctgcttcaagtctcaaatctctgatccaaacggatccttaagctcatggagcaacacttcccagaacttctgcaactggcagggtgtttcatgcaacaacacccagacccaactccgagtcatagcactcaacgtcagctccaaaggcctcagtggttcaataccaccttgcatcggcaatctgagctccatcgcaagcctcgacttatcaagaaacgcgttccttggaaaaattccaagtgagctcagacgcttgagacaaatcagctacctgaacttgagcatcaactctcttgaaggccgtattccagatgagctgtcctcatgcagcaatctcaaggtactcggcttatcgaacaactccctccaaggtgagataccacaaagcttaacccaatgcactcacctccagcaagttatactatacaacaacaagcttgaaggcagtatacccactggatttgggacgcttcctgagctgaaaactttggatctctctaacaacgccctcagaggtggcataccaccattgttgggcagtagctcgtcttttgtatatgttgatcttgggggcaatcagctcacaggaggaatcccagagttcttggcaaatagctcatcccttcaagtgcttaggctcacgcaaaatagtcttacaggggagatccctccagccctcttcaacagctccacgttgacaaccatttacctggaccgtaacaaattagttggttccataccacctattacagcaattgctgcacctattcaataccttactttagagcagaataaactcacaggagggataccagcctcactgggcaacctttcttccttggttcatgtttctttaaaagcaaataacttggtggggagcatccctgagagcctaagtaagatcccaaccctagagaggctagttctcacatacaacaatttgtctggtcatgtgccacaggctattttcaacatatcatctttgaaatatcttagcatggccaataactcactcatcggccaactaccaccagatataggcaacagacttccaaaccttgaagccttaatcctttcaacaacacagttaaatgggccgatcccagcttctcttcgcaatatgtccaagctagaaatggtttatcttgctgctgctggtctcactggtatagtgccatcttttggatccttgccaaacttgcaggaccttgatcttggatacaaccagcttgaagcaggggactggagcttcctctcatcccttgcaaactgcactcaactgaaaaagttggccttggatgcaaattttctccaaggaaccttgcctagctcagtcggtaatcttccctcacagctcaactggttgtggctcaggcaaaacagactttctgggacaattccatcagagattggtaatcttaagagtctcagtgttctgtatttggatgagaatatgtttagtgggagcatcccacctaccattggaaatcttagcaacttactggttctaagcttggcacaaaataacctctcaggccttattcctgattctattggcaaccttgcccaactaaccgagtttcatctagatgggaacaacttcaacgggagcataccttcaaacttagggcagtggagacaattagagaagcttgatttgtcccacaattcattcagcggaagcctgccaagtgaggtcttcaacatttcttccctgtcacaaagtttggacttgtcccacaatttgtttgctgggcccataccactagaaattggcaacctcataaatcttggaagcatcagtatttcaaacaatcgcttgaccggggaaataccgtccactctagggaagtgtgtgcttttggaataccttcacatggaagggaaccttcttactggaagcattccacaatctttcatgaacttaaaaagcatcaaggagctggatctctctcgtaacagcttgtcaggaaaagttccagagttgctcactctcttaagttctttgcagaaactcaacctttcattcaatgactttgaagggccaataccatcaaatggtgtctttggtaatgctagcagggttatcttggacggaaactacagattgtgtgcgaatgatccagggtatagcctgcccctttgctctgaattaggatcacaaagtaaacacaagtctactattttgaaaatagtaattccaatcgcagtgtctgttgtaatttcattgttatgtttaatggctgttctcatcaagagaagaaaacaaaaaccatctttgcaacaatccagtgtgaacatgaggaagatatcatatgaagatattgccaaagcaacagatgagttctctcccacaaatttggttggtttgggatcctttggggctgtttacaagggcatgttgccgtttgagaccaatccagttgctattaaggtttttgatcttaacaagtacggagcacccacaagcttcaatgcggagtgcgaggcattaagatatattcgccatcgaaatcttgtcaaaatcattactttatgctctacgattgatccaaatggctatgattttaaagcactttgctttcagtatatgccaaatggaagtctggaaatgtggctacatccagaggaccatgggcatggtaaaaagagattcctaactttgggtgaaaggattagcttagccttggacattgcatacgctttagattatcttcacaaccagtgtgtatccccactaatacattgtgacatcaaaccaagcaatgttattttggatcttgaaatgactgcatatgtcagtgactttgggttggcaagatttatgagtgctaattcaacagcagcgcctggtaactctacaagtttggctgacttaaaaggatccattggatatattgcaccagagtacggaatgggtgggcaaatatcaatgaagggtgatgtctacagctatggagtgctgttgttagagatattaactggaaagcgtccaactgatgaaaaattcaatgatggtttgagcctccacgatcgcgtggatgctgcatttccccacagagtaactgagattttagaccccaacatgctacacaatgatttggatggtggaaactccgaactgatgcaaagttgtgtcctcccattggttaaggtggccctcatgtgctccatggcatcaccaaaagaccggttagggatggcacaagtttccactgaactacactccatcaagcaagcattccttgagctttccagtggaggaaaagtagtgtga

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Protein seq

MIRLFAPCPKFIPLLAVFIVSCSLPLAISDDTDTDREALLCFKSQISDPNGSLSSWSNTSQNFCNWQGVSCNNTQTQLRVIALNVSSKGLSGSIPPCIGNLSSIASLDLSRNAFLGKIPSELRRLRQISYLNLSINSLEGRIPDELSSCSNLKVLGLSNNSLQGEIPQSLTQCTHLQQVILYNNKLEGSIPTGFGTLPELKTLDLSNNALRGGIPPLLGSSSSFVYVDLGGNQLTGGIPEFLANSSSLQVLRLTQNSLTGEIPPALFNSSTLTTIYLDRNKLVGSIPPITAIAAPIQYLTLEQNKLTGGIPASLGNLSSLVHVSLKANNLVGSIPESLSKIPTLERLVLTYNNLSGHVPQAIFNISSLKYLSMANNSLIGQLPPDIGNRLPNLEALILSTTQLNGPIPASLRNMSKLEMVYLAAAGLTGIVPSFGSLPNLQDLDLGYNQLEAGDWSFLSSLANCTQLKKLALDANFLQGTLPSSVGNLPSQLNWLWLRQNRLSGTIPSEIGNLKSLSVLYLDENMFSGSIPPTIGNLSNLLVLSLAQNNLSGLIPDSIGNLAQLTEFHLDGNNFNGSIPSNLGQWRQLEKLDLSHNSFSGSLPSEVFNISSLSQSLDLSHNLFAGPIPLEIGNLINLGSISISNNRLTGEIPSTLGKCVLLEYLHMEGNLLTGSIPQSFMNLKSIKELDLSRNSLSGKVPELLTLLSSLQKLNLSFNDFEGPIPSNGVFGNASRVILDGNYRLCANDPGYSLPLCSELGSQSKHKSTILKIVIPIAVSVVISLLCLMAVLIKRRKQKPSLQQSSVNMRKISYEDIAKATDEFSPTNLVGLGSFGAVYKGMLPFETNPVAIKVFDLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTIDPNGYDFKALCFQYMPNGSLEMWLHPEDHGHGKKRFLTLGERISLALDIAYALDYLHNQCVSPLIHCDIKPSNVILDLEMTAYVSDFGLARFMSANSTAAPGNSTSLADLKGSIGYIAPEYGMGGQISMKGDVYSYGVLLLEILTGKRPTDEKFNDGLSLHDRVDAAFPHRVTEILDPNMLHNDLDGGNSELMQSCVLPLVKVALMCSMASPKDRLGMAQVSTELHSIKQAFLELSSGGKVV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.017677 0.107340 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0211800 SBH 0.720620 0.353773 0.376538
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g11980 SBH 0.320664 0.151881 0.055591
Nipponbare | IRGSP 1.0 | RAP-db Os02g0211800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0008530 SBH 0.000000 0.0 0.584907
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0008570 SBH 0.094195 0.633336 0.140919
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0008360 SBH 0.247614 1.312991 1.301980
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0008360 RBH 0.0 0.011065 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0008340 SBH 0.000000 7.684546 2.421861
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0104200 SBH 0.5143795 1.7940075 0.4215545
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0008260 RBH 0.049859 0.221784 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0107400 SBH 0.435921 6.0399335 2.2805995
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0008750 RBH 0.030803 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0008320 SBH 0.107421 2.633415 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0008580 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0008600 SBH 0.191014 0.322503 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0008350 SBH 0.0 1.303229 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G008460 SBH 0.044440 0.000000 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0008450 RBH 0.209915 7.908681 1.141916
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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