Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0016460 | OGI:01046720 | 15/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:15434633-15438266 | ||||||||
| Gene Symbol | WAK7/8, OsWAK7/8, OsWAK7, OsWAK8 | ||||||||||
| DNA seq | acatgttttataaagcataggcaaatattaaaacgtatttcaagtttgctcatattttttcattttttccctttaagtgcagttcagacagacagttgatatggcattagttctactgttcagcatgacagtcatggcatatatgatatctatatcagctcagcctgcctctagatgccagacattctgcggtgatgtagaaatcccatacccatttggcattggtgcaggttgtgctattgaaccaggttttgaattatcttgcaacaatacggctgatggatctatgaagccattccatactaatgtcgagttcctaaatatttcactgcttcatggtcatagtcgggcattgaaccacctgtcaacagattgctacaattatagcacaaaatcagtggagccaagcacatggtggcttgacttcacagcaaccccataccgcttctccgatgtacataacaagttcatagtgattggttgcaacacgctttcatatatttacaacagctataacaggacagggtatacgacggcatgtgcatcagtgtgtgggagcatagaagccctgacaaatggctcatgtgctggagtaggctgctgccagaatgccataccaaaaggcttaactcgctacgatgttgctatgtacattgtatataatgattcagatagttggcggttcaacccatgcagctatgcggctctggttgaaacggactcgtttagttttaacacagagtacataactacaaagaagttcaatgatacgtacaaggggcggcagccgctcgtattggactgggcaattggaaatgtgtcatgcgttatggcagaaaacatgacttcttatgcatgccagagcgtaaacagcatctgtgtggattcaaagaacggccctgggtatctatgcaactgcaccaatgggtatcaggggaacccttacctccgcgatggatgcaaaggtataattagttgaggaaaaaaatctttcagtatgcaataatttataacgaatcaagagaagcataaacaaatttacctcctttttgtttgtacttttgttaatccaatgagaacataagagtataagacccatatatattcagtacttccattttttttgaaatttaagaaaaatattggtagacaaatgcTttttttggcctattatctaccagggctgtatcatttccctctacaacatagcattttcatgtttgcttgatacaataatcttcaatcttatttgcttgactggaccaaaataatatgttcatttttgcaatgcagatgtcaatgaatgtgaccaaaatacaggcccatgcccaaagggtgcaacttgtcacaacacaataggagggtaccattgttcttgccctcctggaagaaagttggcaaatgattcaagctcatgtaacccagacatcaacctgatcatcggtaaagagctcaaacataggagcttgctaaactcttctgtcaaatacacaaattgcatctgtgcattcaactctagtactccctccttccctaaatgtttgacgctgttgacttttttaaacatgtttgaccgctcatcttatttaaaaacttctgtaaaatgtgtaaaactatatatatacataaaagtatatttaacaataaatcaaatgataggaaaaaattaataattacttaaattttttgaataaagcaaacggtcaaatatttttaaaaaagtcaacggcgtcaaacattttaggatggagggagtatatttcaagaagctaattcataagtttagtagtcagcataatgtaaaggaatctcttactccacgggtacatatgctgatgtgcacaatatcattacAaatacatctgtgaatatgaaaataagagcttctgttcgtaaaattgtggcatgaataagagcttcggttcttgccatgaataagatcaaacaatgcacagaacaagcgagcatattgtggcatgaccatgcaatcggggtatttctaggaattttaactgagaagatgagaaagtattaaattaaattaataaaaccagcaaaaataatgaaatttaaatctctgaagacagcagtgcattattggtaaatgattatgttgtatcatcaccacaatgagtattttgatacgcttttgttagtacaaatgtgtggtttattttaacgcagcaatttgatataaatttatgcagGTgtctgcattggctccattgttatagtgatagtcatcttcttcgtgcgtataatatttgagcgaagaaagcttacagatgtcaagaaaaaaTattttcagcaacatggagggctgatattatttgataagatgaaatcagaccagggacttgcatttaaggtgttcactcaagcagagctagaacaggcaacaaacaagtttgagaaaagccagattcttggacatggaggacatggcaccgtgtacaagggaataactaaggataacattacagtggcaattaaaaaatgtgcattgattgatgataggcataagaaggaatttggtaaagaaatgttaatcctttcacagatcaaccacaagaacgttgttaagctactgggttgctgccttgaagtggatgtcccaatgctagtttatgagttcatcccaaatggaacattatttgatcttattcatggcaagaaccgaacatttcacatcccttttagttcactcctaaaaattgttaatgaggcagctgaagggcttgccTttttacattcctatgcaaacccaccaattctgcatggtgacgtgaaaacctctaatatccttcttgatgagaattacatggcaaaggtatcagattttggggcctccatattagcaccaactgatgaagaccaatttgtgacaatggttcaagggacatgtggctatctagatcctgaatatctgcaaacatgcagattgacagAaaagagcgatgtttatagctttggtgtggtcctcttggaggtcctcactgggcagatgccattgaagtttgaaggacctgagattcagaaaagcttgtcatcaagtttcctactggcaatgaaggagaataaacttgaggaaatgttggacagtcaaattaaagatcatgagagcatggaactggtcaatgggcttgcagatatagctaagaaatgcttagacatgtgcagtgacaataggccatcaatgaaagaggtatctgaggagcttagtagactacgaaaactttcaaaacacccttggatacagcgtgatactgagatagagagctttctcagtggaccatcaactagtaacctagaaactgagcacagctatctcagtggaccatcaaccagtaactttgaaatcgagcacagcaccgagtatagaaggaaggacgaagaaatgcccataaacccaagcacttcatactttatccggtgaaaacaaattgttacaagattgtactcaagcatttccagtttcgtccttaaccttattctgtccagttcgccggtgatgttttatattgcaattaggaataacttctgtttggttgcataatttgtcactgtatatgcttatgatagtttaccatgactaaatctagagtgaagtaactattatgctatattatttttt
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| CDS seq | atggcattagttctactgttcagcatgacagtcatggcatatatgatatctatatcagctcagcctgcctctagatgccagacattctgcggtgatgtagaaatcccatacccatttggcattggtgcaggttgtgctattgaaccaggttttgaattatcttgcaacaatacggctgatggatctatgaagccattccatactaatgtcgagttcctaaatatttcactgcttcatggtcatagtcgggcattgaaccacctgtcaacagattgctacaattatagcacaaaatcagtggagccaagcacatggtggcttgacttcacagcaaccccataccgcttctccgatgtacataacaagttcatagtgattggttgcaacacgctttcatatatttacaacagctataacaggacagggtatacgacggcatgtgcatcagtgtgtgggagcatagaagccctgacaaatggctcatgtgctggagtaggctgctgccagaatgccataccaaaaggcttaactcgctacgatgttgctatgtacattgtatataatgattcagatagttggcggttcaacccatgcagctatgcggctctggttgaaacggactcgtttagttttaacacagagtacataactacaaagaagttcaatgatacgtacaaggggcggcagccgctcgtattggactgggcaattggaaatgtgtcatgcgttatggcagaaaacatgacttcttatgcatgccagagcgtaaacagcatctgtgtggattcaaagaacggccctgggtatctatgcaactgcaccaatgggtatcaggggaacccttacctccgcgatggatgcaaagGTgtctgcattggctccattgttatagtgatagtcatcttcttcgtgcgtataatatttgagcgaagaaagcttacagatgtcaagaaaaaaTattttcagcaacatggagggctgatattatttgataagatgaaatcagaccagggacttgcatttaaggtgttcactcaagcagagctagaacaggcaacaaacaagtttgagaaaagccagattcttggacatggaggacatggcaccgtgtacaagggaataactaaggataacattacagtggcaattaaaaaatgtgcattgattgatgataggcataagaaggaatttggtaaagaaatgttaatcctttcacagatcaaccacaagaacgttgttaagctactgggttgctgccttgaagtggatgtcccaatgctagtttatgagttcatcccaaatggaacattatttgatcttattcatggcaagaaccgaacatttcacatcccttttagttcactcctaaaaattgttaatgaggcagctgaagggcttgccTttttacattcctatgcaaacccaccaattctgcatggtgacgtgaaaacctctaatatccttcttgatgagaattacatggcaaaggtatcagattttggggcctccatattagcaccaactgatgaagaccaatttgtgacaatggttcaagggacatgtggctatctagatcctgaatatctgcaaacatgcagattgacagAaaagagcgatgtttatagctttggtgtggtcctcttggaggtcctcactgggcagatgccattgaagtttgaaggacctgagattcagaaaagcttgtcatcaagtttcctactggcaatgaaggagaataaacttgaggaaatgttggacagtcaaattaaagatcatgagagcatggaactggtcaatgggcttgcagatatagctaagaaatgcttagacatgtgcagtgacaataggccatcaatgaaagaggtatctgaggagcttagtagactacgaaaactttcaaaacacccttggatacagcgtgatactgagatagagagctttctcagtggaccatcaactagtaacctagaaactgagcacagctatctcagtggaccatcaaccagtaactttgaaatcgagcacagcaccgagtatagaaggaaggacgaagaaatgcccataaacccaagcacttcatactttatccggtga
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| Protein seq | MALVLLFSMTVMAYMISISAQPASRCQTFCGDVEIPYPFGIGAGCAIEPGFELSCNNTADGSMKPFHTNVEFLNISLLHGHSRALNHLSTDCYNYSTKSVEPSTWWLDFTATPYRFSDVHNKFIVIGCNTLSYIYNSYNRTGYTTACASVCGSIEALTNGSCAGVGCCQNAIPKGLTRYDVAMYIVYNDSDSWRFNPCSYAALVETDSFSFNTEYITTKKFNDTYKGRQPLVLDWAIGNVSCVMAENMTSYACQSVNSICVDSKNGPGYLCNCTNGYQGNPYLRDGCKGVCIGSIVIVIVIFFVRIIFERRKLTDVKKKYFQQHGGLILFDKMKSDQGLAFKVFTQAELEQATNKFEKSQILGHGGHGTVYKGITKDNITVAIKKCALIDDRHKKEFGKEMLILSQINHKNVVKLLGCCLEVDVPMLVYEFIPNGTLFDLIHGKNRTFHIPFSSLLKIVNEAAEGLAFLHSYANPPILHGDVKTSNILLDENYMAKVSDFGASILAPTDEDQFVTMVQGTCGYLDPEYLQTCRLTEKSDVYSFGVVLLEVLTGQMPLKFEGPEIQKSLSSSFLLAMKENKLEEMLDSQIKDHESMELVNGLADIAKKCLDMCSDNRPSMKEVSEELSRLRKLSKHPWIQRDTEIESFLSGPSTSNLETEHSYLSGPSTSNFEIEHSTEYRRKDEEMPINPSTSYFIR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0016460 | OsLima_01g0016460.01 | Chr01 | 15434633 | 15438266 | + | NAM | ||
| CDS seq | atggcattagttctactgttcagcatgacagtcatggcatatatgatatctatatcagctcagcctgcctctagatgccagacattctgcggtgatgtagaaatcccatacccatttggcattggtgcaggttgtgctattgaaccaggttttgaattatcttgcaacaatacggctgatggatctatgaagccattccatactaatgtcgagttcctaaatatttcactgcttcatggtcatagtcgggcattgaaccacctgtcaacagattgctacaattatagcacaaaatcagtggagccaagcacatggtggcttgacttcacagcaaccccataccgcttctccgatgtacataacaagttcatagtgattggttgcaacacgctttcatatatttacaacagctataacaggacagggtatacgacggcatgtgcatcagtgtgtgggagcatagaagccctgacaaatggctcatgtgctggagtaggctgctgccagaatgccataccaaaaggcttaactcgctacgatgttgctatgtacattgtatataatgattcagatagttggcggttcaacccatgcagctatgcggctctggttgaaacggactcgtttagttttaacacagagtacataactacaaagaagttcaatgatacgtacaaggggcggcagccgctcgtattggactgggcaattggaaatgtgtcatgcgttatggcagaaaacatgacttcttatgcatgccagagcgtaaacagcatctgtgtggattcaaagaacggccctgggtatctatgcaactgcaccaatgggtatcaggggaacccttacctccgcgatggatgcaaagGTgtctgcattggctccattgttatagtgatagtcatcttcttcgtgcgtataatatttgagcgaagaaagcttacagatgtcaagaaaaaaTattttcagcaacatggagggctgatattatttgataagatgaaatcagaccagggacttgcatttaaggtgttcactcaagcagagctagaacaggcaacaaacaagtttgagaaaagccagattcttggacatggaggacatggcaccgtgtacaagggaataactaaggataacattacagtggcaattaaaaaatgtgcattgattgatgataggcataagaaggaatttggtaaagaaatgttaatcctttcacagatcaaccacaagaacgttgttaagctactgggttgctgccttgaagtggatgtcccaatgctagtttatgagttcatcccaaatggaacattatttgatcttattcatggcaagaaccgaacatttcacatcccttttagttcactcctaaaaattgttaatgaggcagctgaagggcttgccTttttacattcctatgcaaacccaccaattctgcatggtgacgtgaaaacctctaatatccttcttgatgagaattacatggcaaaggtatcagattttggggcctccatattagcaccaactgatgaagaccaatttgtgacaatggttcaagggacatgtggctatctagatcctgaatatctgcaaacatgcagattgacagAaaagagcgatgtttatagctttggtgtggtcctcttggaggtcctcactgggcagatgccattgaagtttgaaggacctgagattcagaaaagcttgtcatcaagtttcctactggcaatgaaggagaataaacttgaggaaatgttggacagtcaaattaaagatcatgagagcatggaactggtcaatgggcttgcagatatagctaagaaatgcttagacatgtgcagtgacaataggccatcaatgaaagaggtatctgaggagcttagtagactacgaaaactttcaaaacacccttggatacagcgtgatactgagatagagagctttctcagtggaccatcaactagtaacctagaaactgagcacagctatctcagtggaccatcaaccagtaactttgaaatcgagcacagcaccgagtatagaaggaaggacgaagaaatgcccataaacccaagcacttcatactttatccggtga
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| Protein seq | MALVLLFSMTVMAYMISISAQPASRCQTFCGDVEIPYPFGIGAGCAIEPGFELSCNNTADGSMKPFHTNVEFLNISLLHGHSRALNHLSTDCYNYSTKSVEPSTWWLDFTATPYRFSDVHNKFIVIGCNTLSYIYNSYNRTGYTTACASVCGSIEALTNGSCAGVGCCQNAIPKGLTRYDVAMYIVYNDSDSWRFNPCSYAALVETDSFSFNTEYITTKKFNDTYKGRQPLVLDWAIGNVSCVMAENMTSYACQSVNSICVDSKNGPGYLCNCTNGYQGNPYLRDGCKGVCIGSIVIVIVIFFVRIIFERRKLTDVKKKYFQQHGGLILFDKMKSDQGLAFKVFTQAELEQATNKFEKSQILGHGGHGTVYKGITKDNITVAIKKCALIDDRHKKEFGKEMLILSQINHKNVVKLLGCCLEVDVPMLVYEFIPNGTLFDLIHGKNRTFHIPFSSLLKIVNEAAEGLAFLHSYANPPILHGDVKTSNILLDENYMAKVSDFGASILAPTDEDQFVTMVQGTCGYLDPEYLQTCRLTEKSDVYSFGVVLLEVLTGQMPLKFEGPEIQKSLSSSFLLAMKENKLEEMLDSQIKDHESMELVNGLADIAKKCLDMCSDNRPSMKEVSEELSRLRKLSKHPWIQRDTEIESFLSGPSTSNLETEHSYLSGPSTSNFEIEHSTEYRRKDEEMPINPSTSYFIR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.101428 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0364800 | RBH | 0.185177 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g26280 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0364800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0016980 | SBH | 0.000000 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0016640 | SBH | 0.032994 | 0.581225 | 0.533063 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0016930 | RBH | 0.264569 | 4.186302 | 0.415021 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0016360 | RBH | 0.053855 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0016420 | RBH | 0.893966 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0251100 | SBH | 0.361569 | 1.1201975 | 0.6234105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0016450 | SBH | 0.105742 | 0.248648 | 0.405267 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0252000 | RBH | 0.0070215 | 0.0277875 | 0.163181 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0016340 | SBH | 0.186216 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0016650 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0016400 | SBH | 0.197946 | 0.209247 | 0.045910 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0016230 | SBH | 0.046574 | 1.698356 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G016640 | SBH | 0.157133 | 0.000000 | 1.157396 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0016410 | SBH | 0.582589 | 0.000000 | 1.842923 |
