Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_01g0003490 OGI:01008970 | 16/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) Chr01:2814787-2836252
Gene Symbol RLCK24, OsRLCK24, RLCK25, OsRLCK25
DNA seq

atgttccgtttgaatctggttaagatggaaattttacctcttttcaaactaccgaacaatacattttgacatgtttagatccctggtaaaattttataccctgtcacatagaatatttagacacatgtacagagtattaaatgtgaatatttagacacatgtacagagtattaaatatagacgAaaaaaataactaattagatagattgtgtgtaaattgcgagacgaatcttttaaacctaattgcaccatgatttgacaatgtggtgctacagtaaacatttgctaatttttaaattagaaacttagcctatcaaacggggaacttagcccccacataacccaatatgaaattcgctcctatggagatttgaactcagaaccttgggggtgctactcaggtcactgcaaccactaggctacatgccctttcacattaaacatttactaataacggattaattaggcttaataaatttgtctcgcggtttataggcggattctgtaatttgttttgttattagactacgtttaatactacaagtgtgtgtccgtatatccgatgtgacacgccaaaaaatttacagccctggatctaaacacaacctttatgtgaaTtttttttttatataaaagttactttaacataacaaataaattcataggtgagtgcaaaggctctacttaggtgagtgcagcatctccgggagcatccctcaggacattggcaacttggtcggcctggaaatcctgtatctggcattcacttcgctatctggagcgattccaacaagcatcgggaagctagcaaacttggttgaaatcggcctgtacaatactagcttgtcaggcttcataccatcatcttttggaaatcttacaagtttgaataggttatacgcgtattacactagtttggaagggccaatacctccaagccttgggaagctaaaggaattgtttgttctagatttgtcaaccaaccgtcataacgggtcaattccgaaagaaatcttggagctaccatcactctcttggtacttggacttgtcatacaattccctctccggaccacttccattagaagtaggtaccttggctaacctaaaccagttgattctgtcaggaaaccagttgtctggccaaatacctgacagtataggaaattgtgaggtgctggaattcctacaactagataagaactcatttgaaggaggcatacctcaatctttgaccaacttgaaagggctcaaccttctgaacctaaccatgaataaattatctggtaggatcccagaaactattggtaggatgggcaatctgcaacagctgtgtctcgctcacaataatttttcaggaccaatccccgcaactctgcaaaatttgacaatgctgtggaaattagatgtggcgttcaataatttgcaaggagaagtaccagatggaggagttttcaagaaccttagttccgcattggttgcagggaacgacaagttgtgtggtggaatacctcagcttcacttagctccatgtcccattcttgatgcgagtaaaaacaaaaaacggtggcctaagtctcttataatagccctgccaacaacaggatcaatcttcttgttactttcagctaccgttctaattgtgttagtctgcagaaagtgtaaacagagaccaaatagtcaagcaacatccccaggtactgatgaacactatcatagagtttcgtattatgcattagcaagaggaagtaatggattttcaaaagataacttgcttggcaaaggaagttatggttcagtctacagatgcactttagaagatgaggttgcaattgtggctgtaaaagtgttcaaccttcaacaatcaggatctgccaagagctttgaggttgaatgtgaggctttgagaagagtacggcaccggtgccttacaaagatcatcacctgttgctcaagtatcaatccacagggtcaagagttcaaggcattaatttttgagtatatgcccaacggaagcttagatggttggcttcatcccacttcaagcaatcgcactcctagcaacacactgagccttctgcagagactcagcattgcggttgatatcttggatgcactggattatcttcacaaccattgtcagccaccgatcatccattgtgacctgaaaccaagtaatattcttcttgcagaagacatgagcgctaaggttggagattttggcatatcaagaatcctccctgaaaatatagctaaaacactgcaaaattcaatcagcatagttggaatcagaggttccattggttatattccaccaggtagttccaaatattttcattacgcctttattgccatttcccagtctccctccaccctaatgggtgggggtcaacttggggcattccaaatatcattttgcagtacacttaaatattaattgaaattgcaaatattgcagagtatggtgaaggttctgcagtctccagactaggtgatatttacagtttaggcatactattgctcgagatatttaccggaaggagccctactgatgacatgttcaaggattcggtggatctacacaaatttgcctcagcagcatttcctgaccgagtcctagagatagctgatcgaacaatctggctacacgaagaagcaaacaataaagatataactgatgcaagcataactagaagtattattcatgagtgtctggtttctgtcctttggcttggcatatcctgctcaatgcaacaagctaaagagcgaatgttgttagcagatgctgtgtcaaagatgcatgcgatcagagatgaatatctgatgtctcaggtggtgaagaaatgaacagtagagtacttgagctaaatgttgggtgaggtacatatgtagagttgatgattgcattggaaataatcggaggcatacaaggtgttgtagttagcattcattaaataactgtaagaagcatgttattgtgaaagatgcatacaggatgcaatcatgttgatcagataatatagaagtactagagttttgcattatttcaatagcaattcctacacaaccatagttgcagaattttaaactacctgactcagattcccacatatacaaggcagctagaaattttgcaaatccataacaatttgtgatatcgagaaagataaaagcacaagtgttcaaacaattaaccaaaataggaatggagggggggtttcattattccaatcacttttcataatagctactgaagctcttctatgagccaaaaatactgccacatccatatttattaattggtcataaaggatataattaaatttacttggcatggaatgttcaatactagtaccatatccatattaattggtcataaaggatatagctaaatttacttggcatggaatgtttaatgcaacaagcccaacagaaattcctgcacttccagtagaaccttggagaactggtacacctcaaacaaccaagccgaacagagaattgaaggattacattataagaagtacaaccacaacagcaagctttgatagaagatgcagcagtagagatgagatgaatacctcatgtttgccagttagtatacaagggaatcaggaacaaagagagaaagcgcccactacccactggtacagaaatgagtaaacaggctggaacagcataatcctgaaataacaagcaaaatacatatagcgtttcagttactatttccacttctatatttctttgaaacagtgccatattggtgaagaaaaactcactttcagaattcaaagttctcagatcaaaataaaacagcaaggaacatgtttttttttttttttgagaatagcaaggaacatgttgccataccatatataccaacgcacgcagctcttcttttgtttcaaatgcagacagcatggaccaaaatggccatcggactacaaaaagaattggactacatcagaagtacttcccttccataaaacctataaactatgagccaatgggcacttgagctgtaccaaactccagacatacatgctccaggaatcaaattacagtaacacccaaacaaatttgcaggacagaaaaagaatgcagatagtaacagccagattaattttgcaaaactgtctccgttccaacaatcacaaggcaactggagataacacgagaaaaatcacatagtcacatgggattatagcgtggtcactattccagatcaagacattagtttccccaaaacagccccgcacaattcttcttacagccactgactagcaagctaccgatcaaacaaccatttcaaatcatcgatgccattaaaagtaccacataaatacatcaaactacagtttactaccactagcactggatagatgcaaacatatgcagcattgcagcctaggaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttgaagatgtagatcttgtacgtctcaacgctcttctttgccttcttcctccccgccttcttcccctcgccgctgcccttctcgcccttccccgcggggagccgcttctccgccttgggcttcttccccgccggggctttttcggccgcgggctcctcctCcgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgtatgccgctgCTctcttcttcccggggagaggagaggaaaaggaagcggtgggatttgcgagattgcggcgtggggaaaagaggagacggggggaggtggttttgtagaggaggggatgtgcaacctgattggtggaaag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ttagatgtgtccttcaataatttgcaaggcaaagtaccagatgaaggtgctttcaggaaccttacgtatgcatcagttgcagggaacgacaagttgtgtggtggaatacctcggcttcacttggctccatgtccaattcctgctgtaagaaaggacagaaaagaacggatgaaatatcttaaagtagctttcataacaacaggagcaattctggtgttagcttcagctattgttctgattatgttacagcacaggaaactaaaaggaagacaaaatagccaagagatatctccggttatagaggaacaatatcagaggatttcatattatgcattatcaagaggaagcaatgaattttcagaagcaaacttgcttggcaaaggaagatatggttctgtttataaatgcactttacaagatgagggtgaacctgtagccataaaagtgttcgaccttaaacaattaggatcttcaaggagctttcaggctgaatgtgaggctttgagaagagttcgccatcgttgtctgacaaagatcatcacttgttgttcaagtattgacccacagggtcaggagttcaaggcattagtttttgagtacatgcccaacggaagcttagatggttggctccatcccacgtcaagcaatcccactcccagcaatacactgagcctttcgcagagactcagcattgtggttgatatcttggacgcactggattatcttcacaacagttgtcagccaccgatcattcattgtgacctgaaaccaagtaatattcttcttgcagaagacatgagtgcaaaggttggagattttggcatatcaaaaatcctccccaaaagcacaactagaactcttcaatattcaaaaagctcaattggaatccgaggttccattggatatattgcaccaggtaggtcaaaaatattatatttttgtattatatcctacaatttctccacctcctccctcatgggtgggggttggactggaactttgtatcttttacatgtcggtagtacggtgaaaaactaactttaactgcaaatattgtagagtatggagaaggttctgcagtaaccagagcaggtgatacttacagcttaggtatattgttgcttgagatgtttaatggaagaagtcccactgatgacattttcagggattcaatggatctgcacaagtttgttgcagcttcttttcttgagagcgccatgaacatagctgatcgaacaatctggctgcatgaagaagcaaatgatacagatgggacaaatgcaagcacaaaaagaagaattattcaacagtgtttggtgtccgttcttaggctcggcttatcctgctcaaatcaacaacccagagaccgaatgctgttaccagatgctgcatcagagattcatgcaatcagagatgaatatctcaggtcttggatggttgaaaatgaacagagcactcttaactaa

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CDS seq

atgttccgtgagtgcagcatctccgggagcatccctcaggacattggcaacttggtcggcctggaaatcctgtatctggcattcacttcgctatctggagcgattccaacaagcatcgggaagctagcaaacttggttgaaatcggcctgtacaatactagcttgtcaggcttcataccatcatcttttggaaatcttacaagtttgaataggttatacgcgtattacactagtttggaagggccaatacctccaagccttgggaagctaaaggaattgtttgttctagatttgtcaaccaaccgtcataacgggtcaattccgaaagaaatcttggagctaccatcactctcttggtacttggacttgtcatacaattccctctccggaccacttccattagaagtaggtaccttggctaacctaaaccagttgattctgtcaggaaaccagttgtctggccaaatacctgacagtataggaaattgtgaggtgctggaattcctacaactagataagaactcatttgaaggaggcatacctcaatctttgaccaacttgaaagggctcaaccttctgaacctaaccatgaataaattatctggtaggatcccagaaactattggtaggatgggcaatctgcaacagctgtgtctcgctcacaataatttttcaggaccaatccccgcaactctgcaaaatttgacaatgctgtggaaattagatgtggcgttcaataatttgcaaggagaagtaccagatggaggagttttcaagaaccttagttccgcattggttgcagggaacgacaagttgtgtggtggaatacctcagcttcacttagctccatgtcccattcttgatgcgagtaaaaacaaaaaacggtggcctaagtctcttataatagccctgccaacaacaggatcaatcttcttgttactttcagctaccgttctaattgtgttagtctgcagaaagtgtaaacagagaccaaatagtcaagcaacatccccaggtactgatgaacactatcatagagtttcgtattatgcattagcaagaggaagtaatggattttcaaaagataacttgcttggcaaaggaagttatggttcagtctacagatgcactttagaagatgaggttgcaattgtggctgtaaaagtgttcaaccttcaacaatcaggatctgccaagagctttgaggttgaatgtgaggctttgagaagagtacggcaccggtgccttacaaagatcatcacctgttgctcaagtatcaatccacagggtcaagagttcaaggcattaatttttgagtatatgcccaacggaagcttagatggttggcttcatcccacttcaagcaatcgcactcctagcaacacactgagccttctgcagagactcagcattgcggttgatatcttggatgcactggattatcttcacaaccattgtcagccaccgatcatccattgtgacctgaaaccaagtaatattcttcttgcagaagacatgagcgctaaggttggagattttggcatatcaagaatcctccctgaaaatatagctaaaacactgcaaaattcaatcagcatagttggaatcagaggttccattggttatattccaccagagtatggtgaaggttctgcagtctccagactaggtgatatttacagtttaggcatactattgctcgagatatttaccggaaggagccctactgatgacatgttcaaggattcggtggatctacacaaatttgcctcagcagcatttcctgaccgagtcctagagatagctgatcgaacaatctggctacacgaagaagcaaacaataaagatataactgatgcaagcataactagaacggtcgctggcggcggcggcggcggcagcagcagcgatgaggccacgctgcttgccttcaaggcagcgttcagggggagcagctcaagtgcgctcgcctcctggaacagcagcaccagcttctgcagctgggatggcgtcacgtgcgaccgtcggacgccgacgccggtggcggcgctgacgctgccctccggcaatctcgccggcgggctccctccggccatcgggaacctcagcttcctgcaaagcctaaacttgagctccaacgagctgtatggagaaattccagcgagccttggccacctccggcgtctacagattctggaccttggaggcaactcgttttccggtgagctccctgccaatctgagttcctgcatcagcttgaagaacctgggcctcgcctttaaccagcttgtcggccgcatcccggtgaagctgggcagcacattgacacaaactccagaagctgcggctgcaaaacaacagcttcactgggccaattccggcatcgctagcgaaccttacctgcacatggacaacaacaacctggtgggcctgatcccgccggaggtcggcaaagctgcagctctacgtgaatttagttttgagcagaacagcctctccggcatatttccgtcctctctgtggaacctgtcatcactgacgatgcttgcagcgaatggcaacatgctgcaaggaagcattcccgcccacattggtgacaagttccctggcacgcaacactttggattggccgataaccagttcagcggagtaatcccctcttctctcttcaatctatcatctctcatagcagtgctcctttatggtaacatattcagtgggttcgtgcctactactgtgggaagattgcaatctcttcggcgattatacttgtatggcaatcaacttgaggcaaataataggaagggttgggaatttatcacttcactaaccaactgctgtcagctgcaacagcttgttatctcagagaacaatttcagcgggcagcttccaaactctattgtcaacttgtcgaccacactccataagctctacttagataataatagcatctctgggagcatacctgaggacattggcaatttgatcggcttggagacgctggatctggggttcacttccttatctggagtgattccagcgagcatagggaagctatcaaatttggttgaagttgccctgtacaacaccagcttgtcaggcctcataccatcatccattggaaatcttacaaatttgaataggttatatgcattctacaccaatttggaagggccaatccctgcaagccttgggatgctcaaaaggctttttgttctagatttatcgaccaaccgtcttaatgggtcaatcccaaaggaaattttagagcttccttcactctcttggtacttggacttgtcatacaattacctctctggaccccttccaatagaagttggtaccttggctaacctaaaccagttgatactgtcgggaaaccagttgtctggtcaaatacctgacagtataggaaattgtcaggtgctggaatcgctattgctagataaaaactcatttgaaggcggcatacctcaatctttgaccaacctgaaagggctcaacatcctgaacctaaccatgaataagttatctggtaggatccccgataccattggacccatcccagcaactctgcaaattttgacaatgttgtggaaattagatgtgtcattcaataatttgcaaggagaagtaccagatgagggagttttcaagaaccttatgtacgcatcggttgcagggaacgacaacttgtgtggtggaatacctcagcttcacttggctccatgtcccattattgatgcaagcaaaaacaacaaacggtggcataagtctcttaaaatagccctgccaacaacaggatcaatcttgctgaagctcaaacagagacaaaatagtcaagcaacattctcaggtactgatgaacactatcatagagtttcgtattacacattagccagaggaagtaatgaattttcaaaagctaatttgcttggcaaaggaagttatggttctgtctatagatgtactttacaagatgagggcgcaattgtggctgtaaaagtgttcaaccttcaacaatcaggatctgccaagagctttgaggttgaatgtgaggctttgagaagagtacgacatcgttgtcttataaagatcatcacctgttgctcaagtatcaatccacagggtcaagagttcaaggcattagtttttgagtacatgcccaatggaagcttagatggctggcttcatcccgcgtcaagcaatcccactcctagcaatacactgagcctttcgcagagactcaacattgcggttgatatcttggatgcactggattatcttcacaaccattgtcagccacccatcattcattgtgacctgaaaccaagtaatattcttcttgcggaagacatgagtgctaaagttggagattttggcatatcaagaatcctccctgaaagtatagttaaaacactgcaacattcaaacagcacagttggaatcagaggttccattggttatattccaccagagtatggtgaaggttctgaggtctccagactaggtgatatttacagcttaggcatattattgcttgagatatttacgggaaggagccctactgatgacatgttcaaggattcggtggatctacacaaatttgcctcagcggcatttcctgacctagtcctagaaatagtcgatcgaacaatctggctacatgaagaagcaaaaagtaaagatataacagatgcaagcataacaagaagtattgttcaagatagcttggtttctgtccttagacttggcatatcctgctcaaagcaacaagccaaagagcgaatgttgttagcagatgctgtatcaaagatgcatgcaatcagagatgaatatattctgtctcagattcccccaagcctcggccgcctccagcatctacggatcctcgaccttggaagcaattcgttttccggtgcgttccctgataatctgagctcctgcatcagcttgataaacctgaccctgggctataaccaacttagtggccacattccggtgaagttgggtaacacactgacgtggctccagaagctccatcttggaaacaacagcttcacagggccgattccagcctcgctagcaaacctatcatcgcttgagttcctaaagttggacttcaaccacctgaaaggcctgatcccgtcaagcctcggaaacatcccaaatctgcagaagattggtcttgacggaaacagcctctctagcgaattcccgccctccatatggaatctgtcaaaactgactgttctccaagtatatgagaacaagctcaaaggaagcattcccgccaacattggcgacaaattacctaacatgcaacactttgttctgtctgtgaaccagtttagcagagtcatcccctcttccttattcaatctatcatcactcacagatgtataccttgatggtaacaaattcagtggatttgtgcctcctaccgtgggaaggttgaaatctcttgtgcgtctatccttgtctagcaaccgacttgaggcaaataacatgaagggctgggaatttataacttcacttgccaactgcagtcagctgcaacagctagatatcgcagaaaattctttcattgggcagctgccaatctctattgttaacctgtcgacaacacttcaaaagttcttcttacgtggtaatagcgtctccgggagcatccccacagacattggcaatttgattggcttggacacgctcgatctagggtccacttctttgtcaggagtgattcctgagagcatagggaagctagcagacttggccataattactctgtacagcactagattgtcaggcctcataccgtcagtaattggaaatcttaccaatttgaatatactagccgcatacgatgcccatttggaaggcccaatacctgcaacccttgggaagctaaagaagctatttgttctagatttgtccacaaaccatctgaacggttcggtcccaaaagaaatttttgagctgccgtcactttcttggttcttaatcttgtcagataatactctctcaggacccattccatcagaagttggtaccttggttaacctaaacagtatagaactgtcaggaaaccagctatctgatcaaatacctgacagtataggaaattgtgaggtgctggaatacctgctgctagatagcaactcgtttgaaggaggcatacctcaatctttgacaaaactaaaagggatcgccatactgaacctaaccatgaacaagttttctggatcaatcccagaaaccctacaaaatttgacacagctgtggcacttagatgtgtccttcaataatttgcaaggcaaagtaccagatgaaggtgctttcaggaaccttacgtatgcatcagttgcagggaacgacaagttgtgtggtggaatacctcggcttcacttggctccatgtccaattcctgctgtaagaaaggacagaaaagaacggatgaaatatcttaaagtagctttcataacaacaggagcaattctggtgttagcttcagctattgttctgattatgttacagcacaggaaactaaaaggaagacaaaatagccaagagatatctccggttatagaggaacaatatcagaggatttcatattatgcattatcaagaggaagcaatgaattttcagaagcaaacttgcttggcaaaggaagatatggttctgtttataaatgcactttacaagatgagggtgaacctgtagccataaaagtgttcgaccttaaacaattaggatcttcaaggagctttcaggctgaatgtgaggctttgagaagagttcgccatcgttgtctgacaaagatcatcacttgttgttcaagtattgacccacagggtcaggagttcaaggcattagtttttgagtacatgcccaacggaagcttagatggttggctccatcccacgtcaagcaatcccactcccagcaatacactgagcctttcgcagagactcagcattgtggttgatatcttggacgcactggattatcttcacaacagttgtcagccaccgatcattcattgtgacctgaaaccaagtaatattcttcttgcagaagacatgagtgcaaaggttggagattttggcatatcaaaaatcctccccaaaagcacaactagaactcttcaatattcaaaaagctcaattggaatccgaggttccattggatatattgcaccagagtatggagaaggttctgcagtaaccagagcaggtgatacttacagcttaggtatattgttgcttgagatgtttaatggaagaagtcccactgatgacattttcagggattcaatggatctgcacaagctcggcttatcctgctcaaatcaacaacccagagaccgaatgctgttaccagatgctgcatcagagattcatgcaatcagagatgaatatctcaggtcttggatggttgaaaatgaacagagcactcttaactaa

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Protein seq

MFRECSISGSIPQDIGNLVGLEILYLAFTSLSGAIPTSIGKLANLVEIGLYNTSLSGFIPSSFGNLTSLNRLYAYYTSLEGPIPPSLGKLKELFVLDLSTNRHNGSIPKEILELPSLSWYLDLSYNSLSGPLPLEVGTLANLNQLILSGNQLSGQIPDSIGNCEVLEFLQLDKNSFEGGIPQSLTNLKGLNLLNLTMNKLSGRIPETIGRMGNLQQLCLAHNNFSGPIPATLQNLTMLWKLDVAFNNLQGEVPDGGVFKNLSSALVAGNDKLCGGIPQLHLAPCPILDASKNKKRWPKSLIIALPTTGSIFLLLSATVLIVLVCRKCKQRPNSQATSPGTDEHYHRVSYYALARGSNGFSKDNLLGKGSYGSVYRCTLEDEVAIVAVKVFNLQQSGSAKSFEVECEALRRVRHRCLTKIITCCSSINPQGQEFKALIFEYMPNGSLDGWLHPTSSNRTPSNTLSLLQRLSIAVDILDALDYLHNHCQPPIIHCDLKPSNILLAEDMSAKVGDFGISRILPENIAKTLQNSISIVGIRGSIGYIPPEYGEGSAVSRLGDIYSLGILLLEIFTGRSPTDDMFKDSVDLHKFASAAFPDRVLEIADRTIWLHEEANNKDITDASITRTVAGGGGGGSSSDEATLLAFKAAFRGSSSSALASWNSSTSFCSWDGVTCDRRTPTPVAALTLPSGNLAGGLPPAIGNLSFLQSLNLSSNELYGEIPASLGHLRRLQILDLGGNSFSGELPANLSSCISLKNLGLAFNQLVGRIPVKLGSTLTQTPEAAAAKQQLHWANSGIASEPYLHMDNNNLVGLIPPEVGKAAALREFSFEQNSLSGIFPSSLWNLSSLTMLAANGNMLQGSIPAHIGDKFPGTQHFGLADNQFSGVIPSSLFNLSSLIAVLLYGNIFSGFVPTTVGRLQSLRRLYLYGNQLEANNRKGWEFITSLTNCCQLQQLVISENNFSGQLPNSIVNLSTTLHKLYLDNNSISGSIPEDIGNLIGLETLDLGFTSLSGVIPASIGKLSNLVEVALYNTSLSGLIPSSIGNLTNLNRLYAFYTNLEGPIPASLGMLKRLFVLDLSTNRLNGSIPKEILELPSLSWYLDLSYNYLSGPLPIEVGTLANLNQLILSGNQLSGQIPDSIGNCQVLESLLLDKNSFEGGIPQSLTNLKGLNILNLTMNKLSGRIPDTIGPIPATLQILTMLWKLDVSFNNLQGEVPDEGVFKNLMYASVAGNDNLCGGIPQLHLAPCPIIDASKNNKRWHKSLKIALPTTGSILLKLKQRQNSQATFSGTDEHYHRVSYYTLARGSNEFSKANLLGKGSYGSVYRCTLQDEGAIVAVKVFNLQQSGSAKSFEVECEALRRVRHRCLIKIITCCSSINPQGQEFKALVFEYMPNGSLDGWLHPASSNPTPSNTLSLSQRLNIAVDILDALDYLHNHCQPPIIHCDLKPSNILLAEDMSAKVGDFGISRILPESIVKTLQHSNSTVGIRGSIGYIPPEYGEGSEVSRLGDIYSLGILLLEIFTGRSPTDDMFKDSVDLHKFASAAFPDLVLEIVDRTIWLHEEAKSKDITDASITRSIVQDSLVSVLRLGISCSKQQAKERMLLADAVSKMHAIRDEYILSQIPPSLGRLQHLRILDLGSNSFSGAFPDNLSSCISLINLTLGYNQLSGHIPVKLGNTLTWLQKLHLGNNSFTGPIPASLANLSSLEFLKLDFNHLKGLIPSSLGNIPNLQKIGLDGNSLSSEFPPSIWNLSKLTVLQVYENKLKGSIPANIGDKLPNMQHFVLSVNQFSRVIPSSLFNLSSLTDVYLDGNKFSGFVPPTVGRLKSLVRLSLSSNRLEANNMKGWEFITSLANCSQLQQLDIAENSFIGQLPISIVNLSTTLQKFFLRGNSVSGSIPTDIGNLIGLDTLDLGSTSLSGVIPESIGKLADLAIITLYSTRLSGLIPSVIGNLTNLNILAAYDAHLEGPIPATLGKLKKLFVLDLSTNHLNGSVPKEIFELPSLSWFLILSDNTLSGPIPSEVGTLVNLNSIELSGNQLSDQIPDSIGNCEVLEYLLLDSNSFEGGIPQSLTKLKGIAILNLTMNKFSGSIPETLQNLTQLWHLDVSFNNLQGKVPDEGAFRNLTYASVAGNDKLCGGIPRLHLAPCPIPAVRKDRKERMKYLKVAFITTGAILVLASAIVLIMLQHRKLKGRQNSQEISPVIEEQYQRISYYALSRGSNEFSEANLLGKGRYGSVYKCTLQDEGEPVAIKVFDLKQLGSSRSFQAECEALRRVRHRCLTKIITCCSSIDPQGQEFKALVFEYMPNGSLDGWLHPTSSNPTPSNTLSLSQRLSIVVDILDALDYLHNSCQPPIIHCDLKPSNILLAEDMSAKVGDFGISKILPKSTTRTLQYSKSSIGIRGSIGYIAPEYGEGSAVTRAGDTYSLGILLLEMFNGRSPTDDIFRDSMDLHKLGLSCSNQQPRDRMLLPDAASEIHAIRDEYLRSWMVENEQSTLN

Function Probable LRR receptor-like serine/threonine-protein kinase At3g47570 [UniProtKB/Swiss-Prot:C0LGP4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_01g0003490 OsLima_01g0003490.01 Chr01 2814787 2836252 + NAM
CDS seq

atgttccgtgagtgcagcatctccgggagcatccctcaggacattggcaacttggtcggcctggaaatcctgtatctggcattcacttcgctatctggagcgattccaacaagcatcgggaagctagcaaacttggttgaaatcggcctgtacaatactagcttgtcaggcttcataccatcatcttttggaaatcttacaagtttgaataggttatacgcgtattacactagtttggaagggccaatacctccaagccttgggaagctaaaggaattgtttgttctagatttgtcaaccaaccgtcataacgggtcaattccgaaagaaatcttggagctaccatcactctcttggtacttggacttgtcatacaattccctctccggaccacttccattagaagtaggtaccttggctaacctaaaccagttgattctgtcaggaaaccagttgtctggccaaatacctgacagtataggaaattgtgaggtgctggaattcctacaactagataagaactcatttgaaggaggcatacctcaatctttgaccaacttgaaagggctcaaccttctgaacctaaccatgaataaattatctggtaggatcccagaaactattggtaggatgggcaatctgcaacagctgtgtctcgctcacaataatttttcaggaccaatccccgcaactctgcaaaatttgacaatgctgtggaaattagatgtggcgttcaataatttgcaaggagaagtaccagatggaggagttttcaagaaccttagttccgcattggttgcagggaacgacaagttgtgtggtggaatacctcagcttcacttagctccatgtcccattcttgatgcgagtaaaaacaaaaaacggtggcctaagtctcttataatagccctgccaacaacaggatcaatcttcttgttactttcagctaccgttctaattgtgttagtctgcagaaagtgtaaacagagaccaaatagtcaagcaacatccccaggtactgatgaacactatcatagagtttcgtattatgcattagcaagaggaagtaatggattttcaaaagataacttgcttggcaaaggaagttatggttcagtctacagatgcactttagaagatgaggttgcaattgtggctgtaaaagtgttcaaccttcaacaatcaggatctgccaagagctttgaggttgaatgtgaggctttgagaagagtacggcaccggtgccttacaaagatcatcacctgttgctcaagtatcaatccacagggtcaagagttcaaggcattaatttttgagtatatgcccaacggaagcttagatggttggcttcatcccacttcaagcaatcgcactcctagcaacacactgagccttctgcagagactcagcattgcggttgatatcttggatgcactggattatcttcacaaccattgtcagccaccgatcatccattgtgacctgaaaccaagtaatattcttcttgcagaagacatgagcgctaaggttggagattttggcatatcaagaatcctccctgaaaatatagctaaaacactgcaaaattcaatcagcatagttggaatcagaggttccattggttatattccaccagagtatggtgaaggttctgcagtctccagactaggtgatatttacagtttaggcatactattgctcgagatatttaccggaaggagccctactgatgacatgttcaaggattcggtggatctacacaaatttgcctcagcagcatttcctgaccgagtcctagagatagctgatcgaacaatctggctacacgaagaagcaaacaataaagatataactgatgcaagcataactagaacggtcgctggcggcggcggcggcggcagcagcagcgatgaggccacgctgcttgccttcaaggcagcgttcagggggagcagctcaagtgcgctcgcctcctggaacagcagcaccagcttctgcagctgggatggcgtcacgtgcgaccgtcggacgccgacgccggtggcggcgctgacgctgccctccggcaatctcgccggcgggctccctccggccatcgggaacctcagcttcctgcaaagcctaaacttgagctccaacgagctgtatggagaaattccagcgagccttggccacctccggcgtctacagattctggaccttggaggcaactcgttttccggtgagctccctgccaatctgagttcctgcatcagcttgaagaacctgggcctcgcctttaaccagcttgtcggccgcatcccggtgaagctgggcagcacattgacacaaactccagaagctgcggctgcaaaacaacagcttcactgggccaattccggcatcgctagcgaaccttacctgcacatggacaacaacaacctggtgggcctgatcccgccggaggtcggcaaagctgcagctctacgtgaatttagttttgagcagaacagcctctccggcatatttccgtcctctctgtggaacctgtcatcactgacgatgcttgcagcgaatggcaacatgctgcaaggaagcattcccgcccacattggtgacaagttccctggcacgcaacactttggattggccgataaccagttcagcggagtaatcccctcttctctcttcaatctatcatctctcatagcagtgctcctttatggtaacatattcagtgggttcgtgcctactactgtgggaagattgcaatctcttcggcgattatacttgtatggcaatcaacttgaggcaaataataggaagggttgggaatttatcacttcactaaccaactgctgtcagctgcaacagcttgttatctcagagaacaatttcagcgggcagcttccaaactctattgtcaacttgtcgaccacactccataagctctacttagataataatagcatctctgggagcatacctgaggacattggcaatttgatcggcttggagacgctggatctggggttcacttccttatctggagtgattccagcgagcatagggaagctatcaaatttggttgaagttgccctgtacaacaccagcttgtcaggcctcataccatcatccattggaaatcttacaaatttgaataggttatatgcattctacaccaatttggaagggccaatccctgcaagccttgggatgctcaaaaggctttttgttctagatttatcgaccaaccgtcttaatgggtcaatcccaaaggaaattttagagcttccttcactctcttggtacttggacttgtcatacaattacctctctggaccccttccaatagaagttggtaccttggctaacctaaaccagttgatactgtcgggaaaccagttgtctggtcaaatacctgacagtataggaaattgtcaggtgctggaatcgctattgctagataaaaactcatttgaaggcggcatacctcaatctttgaccaacctgaaagggctcaacatcctgaacctaaccatgaataagttatctggtaggatccccgataccattggacccatcccagcaactctgcaaattttgacaatgttgtggaaattagatgtgtcattcaataatttgcaaggagaagtaccagatgagggagttttcaagaaccttatgtacgcatcggttgcagggaacgacaacttgtgtggtggaatacctcagcttcacttggctccatgtcccattattgatgcaagcaaaaacaacaaacggtggcataagtctcttaaaatagccctgccaacaacaggatcaatcttgctgaagctcaaacagagacaaaatagtcaagcaacattctcaggtactgatgaacactatcatagagtttcgtattacacattagccagaggaagtaatgaattttcaaaagctaatttgcttggcaaaggaagttatggttctgtctatagatgtactttacaagatgagggcgcaattgtggctgtaaaagtgttcaaccttcaacaatcaggatctgccaagagctttgaggttgaatgtgaggctttgagaagagtacgacatcgttgtcttataaagatcatcacctgttgctcaagtatcaatccacagggtcaagagttcaaggcattagtttttgagtacatgcccaatggaagcttagatggctggcttcatcccgcgtcaagcaatcccactcctagcaatacactgagcctttcgcagagactcaacattgcggttgatatcttggatgcactggattatcttcacaaccattgtcagccacccatcattcattgtgacctgaaaccaagtaatattcttcttgcggaagacatgagtgctaaagttggagattttggcatatcaagaatcctccctgaaagtatagttaaaacactgcaacattcaaacagcacagttggaatcagaggttccattggttatattccaccagagtatggtgaaggttctgaggtctccagactaggtgatatttacagcttaggcatattattgcttgagatatttacgggaaggagccctactgatgacatgttcaaggattcggtggatctacacaaatttgcctcagcggcatttcctgacctagtcctagaaatagtcgatcgaacaatctggctacatgaagaagcaaaaagtaaagatataacagatgcaagcataacaagaagtattgttcaagatagcttggtttctgtccttagacttggcatatcctgctcaaagcaacaagccaaagagcgaatgttgttagcagatgctgtatcaaagatgcatgcaatcagagatgaatatattctgtctcagattcccccaagcctcggccgcctccagcatctacggatcctcgaccttggaagcaattcgttttccggtgcgttccctgataatctgagctcctgcatcagcttgataaacctgaccctgggctataaccaacttagtggccacattccggtgaagttgggtaacacactgacgtggctccagaagctccatcttggaaacaacagcttcacagggccgattccagcctcgctagcaaacctatcatcgcttgagttcctaaagttggacttcaaccacctgaaaggcctgatcccgtcaagcctcggaaacatcccaaatctgcagaagattggtcttgacggaaacagcctctctagcgaattcccgccctccatatggaatctgtcaaaactgactgttctccaagtatatgagaacaagctcaaaggaagcattcccgccaacattggcgacaaattacctaacatgcaacactttgttctgtctgtgaaccagtttagcagagtcatcccctcttccttattcaatctatcatcactcacagatgtataccttgatggtaacaaattcagtggatttgtgcctcctaccgtgggaaggttgaaatctcttgtgcgtctatccttgtctagcaaccgacttgaggcaaataacatgaagggctgggaatttataacttcacttgccaactgcagtcagctgcaacagctagatatcgcagaaaattctttcattgggcagctgccaatctctattgttaacctgtcgacaacacttcaaaagttcttcttacgtggtaatagcgtctccgggagcatccccacagacattggcaatttgattggcttggacacgctcgatctagggtccacttctttgtcaggagtgattcctgagagcatagggaagctagcagacttggccataattactctgtacagcactagattgtcaggcctcataccgtcagtaattggaaatcttaccaatttgaatatactagccgcatacgatgcccatttggaaggcccaatacctgcaacccttgggaagctaaagaagctatttgttctagatttgtccacaaaccatctgaacggttcggtcccaaaagaaatttttgagctgccgtcactttcttggttcttaatcttgtcagataatactctctcaggacccattccatcagaagttggtaccttggttaacctaaacagtatagaactgtcaggaaaccagctatctgatcaaatacctgacagtataggaaattgtgaggtgctggaatacctgctgctagatagcaactcgtttgaaggaggcatacctcaatctttgacaaaactaaaagggatcgccatactgaacctaaccatgaacaagttttctggatcaatcccagaaaccctacaaaatttgacacagctgtggcacttagatgtgtccttcaataatttgcaaggcaaagtaccagatgaaggtgctttcaggaaccttacgtatgcatcagttgcagggaacgacaagttgtgtggtggaatacctcggcttcacttggctccatgtccaattcctgctgtaagaaaggacagaaaagaacggatgaaatatcttaaagtagctttcataacaacaggagcaattctggtgttagcttcagctattgttctgattatgttacagcacaggaaactaaaaggaagacaaaatagccaagagatatctccggttatagaggaacaatatcagaggatttcatattatgcattatcaagaggaagcaatgaattttcagaagcaaacttgcttggcaaaggaagatatggttctgtttataaatgcactttacaagatgagggtgaacctgtagccataaaagtgttcgaccttaaacaattaggatcttcaaggagctttcaggctgaatgtgaggctttgagaagagttcgccatcgttgtctgacaaagatcatcacttgttgttcaagtattgacccacagggtcaggagttcaaggcattagtttttgagtacatgcccaacggaagcttagatggttggctccatcccacgtcaagcaatcccactcccagcaatacactgagcctttcgcagagactcagcattgtggttgatatcttggacgcactggattatcttcacaacagttgtcagccaccgatcattcattgtgacctgaaaccaagtaatattcttcttgcagaagacatgagtgcaaaggttggagattttggcatatcaaaaatcctccccaaaagcacaactagaactcttcaatattcaaaaagctcaattggaatccgaggttccattggatatattgcaccagagtatggagaaggttctgcagtaaccagagcaggtgatacttacagcttaggtatattgttgcttgagatgtttaatggaagaagtcccactgatgacattttcagggattcaatggatctgcacaagctcggcttatcctgctcaaatcaacaacccagagaccgaatgctgttaccagatgctgcatcagagattcatgcaatcagagatgaatatctcaggtcttggatggttgaaaatgaacagagcactcttaactaa

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Protein seq

MFRECSISGSIPQDIGNLVGLEILYLAFTSLSGAIPTSIGKLANLVEIGLYNTSLSGFIPSSFGNLTSLNRLYAYYTSLEGPIPPSLGKLKELFVLDLSTNRHNGSIPKEILELPSLSWYLDLSYNSLSGPLPLEVGTLANLNQLILSGNQLSGQIPDSIGNCEVLEFLQLDKNSFEGGIPQSLTNLKGLNLLNLTMNKLSGRIPETIGRMGNLQQLCLAHNNFSGPIPATLQNLTMLWKLDVAFNNLQGEVPDGGVFKNLSSALVAGNDKLCGGIPQLHLAPCPILDASKNKKRWPKSLIIALPTTGSIFLLLSATVLIVLVCRKCKQRPNSQATSPGTDEHYHRVSYYALARGSNGFSKDNLLGKGSYGSVYRCTLEDEVAIVAVKVFNLQQSGSAKSFEVECEALRRVRHRCLTKIITCCSSINPQGQEFKALIFEYMPNGSLDGWLHPTSSNRTPSNTLSLLQRLSIAVDILDALDYLHNHCQPPIIHCDLKPSNILLAEDMSAKVGDFGISRILPENIAKTLQNSISIVGIRGSIGYIPPEYGEGSAVSRLGDIYSLGILLLEIFTGRSPTDDMFKDSVDLHKFASAAFPDRVLEIADRTIWLHEEANNKDITDASITRTVAGGGGGGSSSDEATLLAFKAAFRGSSSSALASWNSSTSFCSWDGVTCDRRTPTPVAALTLPSGNLAGGLPPAIGNLSFLQSLNLSSNELYGEIPASLGHLRRLQILDLGGNSFSGELPANLSSCISLKNLGLAFNQLVGRIPVKLGSTLTQTPEAAAAKQQLHWANSGIASEPYLHMDNNNLVGLIPPEVGKAAALREFSFEQNSLSGIFPSSLWNLSSLTMLAANGNMLQGSIPAHIGDKFPGTQHFGLADNQFSGVIPSSLFNLSSLIAVLLYGNIFSGFVPTTVGRLQSLRRLYLYGNQLEANNRKGWEFITSLTNCCQLQQLVISENNFSGQLPNSIVNLSTTLHKLYLDNNSISGSIPEDIGNLIGLETLDLGFTSLSGVIPASIGKLSNLVEVALYNTSLSGLIPSSIGNLTNLNRLYAFYTNLEGPIPASLGMLKRLFVLDLSTNRLNGSIPKEILELPSLSWYLDLSYNYLSGPLPIEVGTLANLNQLILSGNQLSGQIPDSIGNCQVLESLLLDKNSFEGGIPQSLTNLKGLNILNLTMNKLSGRIPDTIGPIPATLQILTMLWKLDVSFNNLQGEVPDEGVFKNLMYASVAGNDNLCGGIPQLHLAPCPIIDASKNNKRWHKSLKIALPTTGSILLKLKQRQNSQATFSGTDEHYHRVSYYTLARGSNEFSKANLLGKGSYGSVYRCTLQDEGAIVAVKVFNLQQSGSAKSFEVECEALRRVRHRCLIKIITCCSSINPQGQEFKALVFEYMPNGSLDGWLHPASSNPTPSNTLSLSQRLNIAVDILDALDYLHNHCQPPIIHCDLKPSNILLAEDMSAKVGDFGISRILPESIVKTLQHSNSTVGIRGSIGYIPPEYGEGSEVSRLGDIYSLGILLLEIFTGRSPTDDMFKDSVDLHKFASAAFPDLVLEIVDRTIWLHEEAKSKDITDASITRSIVQDSLVSVLRLGISCSKQQAKERMLLADAVSKMHAIRDEYILSQIPPSLGRLQHLRILDLGSNSFSGAFPDNLSSCISLINLTLGYNQLSGHIPVKLGNTLTWLQKLHLGNNSFTGPIPASLANLSSLEFLKLDFNHLKGLIPSSLGNIPNLQKIGLDGNSLSSEFPPSIWNLSKLTVLQVYENKLKGSIPANIGDKLPNMQHFVLSVNQFSRVIPSSLFNLSSLTDVYLDGNKFSGFVPPTVGRLKSLVRLSLSSNRLEANNMKGWEFITSLANCSQLQQLDIAENSFIGQLPISIVNLSTTLQKFFLRGNSVSGSIPTDIGNLIGLDTLDLGSTSLSGVIPESIGKLADLAIITLYSTRLSGLIPSVIGNLTNLNILAAYDAHLEGPIPATLGKLKKLFVLDLSTNHLNGSVPKEIFELPSLSWFLILSDNTLSGPIPSEVGTLVNLNSIELSGNQLSDQIPDSIGNCEVLEYLLLDSNSFEGGIPQSLTKLKGIAILNLTMNKFSGSIPETLQNLTQLWHLDVSFNNLQGKVPDEGAFRNLTYASVAGNDKLCGGIPRLHLAPCPIPAVRKDRKERMKYLKVAFITTGAILVLASAIVLIMLQHRKLKGRQNSQEISPVIEEQYQRISYYALSRGSNEFSEANLLGKGRYGSVYKCTLQDEGEPVAIKVFDLKQLGSSRSFQAECEALRRVRHRCLTKIITCCSSIDPQGQEFKALVFEYMPNGSLDGWLHPTSSNPTPSNTLSLSQRLSIVVDILDALDYLHNSCQPPIIHCDLKPSNILLAEDMSAKVGDFGISKILPKSTTRTLQYSKSSIGIRGSIGYIAPEYGEGSAVTRAGDTYSLGILLLEMFNGRSPTDDIFRDSMDLHKLGLSCSNQQPRDRMLLPDAASEIHAIRDEYLRSWMVENEQSTLN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.031351 0.016273 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0152687 RBH 0.108840 0.000000 0.734873
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g05640 RBH 0.175032 0.058426 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0152800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0003830 RBH 0.221416 0.000000 0.240205
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0003420 RBH 0.0 0.247682 0.269821
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0003830 RBH 0.149968 2.016703 3.367519
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0003510 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0003470 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0048500 RBH 0.746265 3.0119785 4.800224
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0003380 RBH 0.021284 0.000000 0.236726
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0050200 RBH 0.798937 3.1670835 3.609677
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0003440 RBH 0.000000 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0003560 RBH 0.000000 3.479686 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0003760 RBH 0.332478 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0003720 RBH 0.000000 0.014339 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0003350 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G003750 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0003620 RBH 0.545474 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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