Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_Ung0072530 OGI:99065910 | 1/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) ChrUN-Ctg547:47828-50529
Gene Symbol OsCP1
DNA seq

CAGCTCATTGAACTGAATAAAGTCGGTGTGCTATAGCTACCATTCCCCCGGACCTGTGTGTAGGCGCTGTTGGTGTCTGGGTGGTGATATATTTTTTCTTTTTTTGTTACGATCTTTCTAGAGTTGTAATCTTGTAATTTTTTTTTCTGCTCTATCAATATAACTTCGCATTTCCAAAAAAGTTCATTTCAGCTCACTCAACTGAATAAAGTCAGCTAGCTTGTATTTTAGGTGAAAACCGTGCGAAATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAACCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGAGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGTAAAAAAGCGTGAACATTTTTTTCTCGTTCTAAAAAGCATATAACATTTCTATGGAAAAAGCCAAATGCAGTAAAAAAACATATGGATAGATATAGTACAAATTATGCAAAATCATTAGATTATTACGGCACATTATTTTCTAACAGGATTTAAAATTTCGGTTTCCGAAATTTTGAAATCCCTGTTAACACGAAATTTTTGGATTTTTTTCTAATTATTCTTAAATTTAGTCAAAAACTCAAAATATATTTAAATTCAGTTAGATTTTTAAATAATTTCTTGCATAAGTGAAAATACGATTTTTTTTTCAAAATGGTTTTTTACTGTTGGCTACACTTTTTTCTCAGAATATTTTATCTATCCATATAATTAAGCATATAGTTTATGGCAAAAGATCTTATATTTACTTCGGAAATAATTAACTATTTGCCACTCTTACGAGTGGCGATAAAGGATTTGCCACTGAACCCACATGTCATAGACACATGAGAGCCACATGTTATATACAACAAGTGACGAATCCTTAATGGCCACATCTCAAAAGTGGCACAAAGTTAAATGTCCCATTTACTTCGTGCACATGTGTGCTAGTCACTCGGCTCTTATTGGTGTGATTTTAAGGGAGCTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGTAATTGCACGGTGAAATCTCATGAAAAATTATATTTATGTTAACTATACTAAAAAAAATCAATGTTGAATTTGAAGAAAAAAATAACTTAATTTTTGCGCAAAGCGTTCGGAGGAAACATAAATGTTTATCATGAAAAAAGATTGGCTCCGAGTAAAGAAAGATGCATGGTTAATAAACACTTGTTTTAGGACTAAAATGAAGTTAGTCTGAATACAAACTGAAAATTTGCCTTGTTTTAGGACTAAAATGAAGTTAGTCTGAATACAAACTGAAAATTTACCATCTGGTGTTTATGTTGCAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGTAATTAACAACATGACCAACAACCTAGCTACACGATATGTCTGAAATTAATCAACAGTTCAACACATGATCTACACATATTCAGTGTGCGTGTGTCTAATTATACTCAAAGATACTAATACCATCATATATATATCACTTGGGAATAATCAAACTAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATAGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGAGCCTGTGATCGATGGAGGGATATGATATGGATATGATCGATGCTTTATGTGTGCTTCGCTGAAAGTAGTGCTAGCTAAGCTTTCGTTGACAACTGGATTTAATCTTCTACTGTTCACGGTTGTACTGTACGCCAGGTGTCAAATCAGAAGTTAGGTAAAATAAATTCAAAGAGGAGCATGACTAACATAATGTGCTCAACTGGATTGCTGAAAAATTTGCTCAAATCGACATT

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CDS seq

ATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAACCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGAGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATAGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGA

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Protein seq

MLRCFLVAAAAVALAAAAAAPARAIPFTESDLSSEENLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRRTYAGSRARHHRSLRGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPVAVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGVSSDSNGLCGIAMEASYPVKSGARNAAASNRVVKDEM

Function Thiol protease SEN102 [UniProtKB/Swiss-Prot:P43156]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0072530 OsLiXu_Ung0072530.02 ChrUN-Ctg547 47828 50529 + NAM
CDS seq

ATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAACCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGAGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATAGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGA

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Protein seq

MLRCFLVAAAAVALAAAAAAPARAIPFTESDLSSEENLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRRTYAGSRARHHRSLRGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPVAVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGVSSDSNGLCGIAMEASYPVKSGARNAAASNRVVKDEM

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Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0072530 OsLiXu_Ung0072530.03 ChrUN-Ctg547 47829 50529 + NAM
CDS seq

ATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAACCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGAGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATAGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGA

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Protein seq

MLRCFLVAAAAVALAAAAAAPARAIPFTESDLSSEENLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRRTYAGSRARHHRSLRGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPVAVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGVSSDSNGLCGIAMEASYPVKSGARNAAASNRVVKDEM

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Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0072530 OsLiXu_Ung0072530.01 ChrUN-Ctg547 47828 50529 + NAM
CDS seq

ATGCTGAGGTGCTTCCTGGTCGCGGCGGCGGCGGTGGCGTTGGCTGCGGCGGCGGCAGCGCCGGCGAGGGCTATCCCGTTCACGGAGAGCGACCTCTCGTCGGAGGAGAACCTGCGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGGCGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACATCCACGAGGCGAACAGGAGGGGCGGCCGGCCGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGCCGCACCTACGCGGGCTCCAGGGCGCGCCACCACCGCAGCCTGAGAGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGACGACGAGGACAACCTGCCGCCCGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGATCACCACCGAGTCCAACTACCCATATAGAGCGGAGCAGGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGATTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTCGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCAGTAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTCGACCATGGTGTTGCCGCTGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATAGTCAAGAACTCGTGGGGCGAGGATTGGGGCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGACTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCTTACCCTGTCAAATCAGGAGCACGCAATGCTGCTGCAAGTAACAGAGTGGTTAAAGACGAGATGTGA

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Protein seq

MLRCFLVAAAAVALAAAAAAPARAIPFTESDLSSEENLRALYERWRSRYTVSRPAASGGVGNDDGEARRRFNVFVENARYIHEANRRGGRPFRLALNKFADMTTDEFRRTYAGSRARHHRSLRGGRGGEGGSFRYGGDDEDNLPPAVDWRERGAVTGIKDQGQCGSCWAFSAVAAVEGVNKIKTGRLVTLSEQELVDCDTGDNQGCDGGLMDYAFQFIKRNGGITTESNYPYRAEQGRCNKAKASSHDVTIDGYEDVPANDESALQKAVANQPVAVAVEASGQDFQFYSEGVFTGECGTDLDHGVAAVGYGITRDGTKYWIVKNSWGEDWGERGYIRMQRGVSSDSNGLCGIAMEASYPVKSGARNAAASNRVVKDEM

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Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0072530 OsLiXu_Ung0072530.04 ChrUN-Ctg547 47828 50506 + IsoSeq
CDS seq

ATGTTATATACAACAAGTGACGAATCCTTAATGGCCACATCTCAAAAGTGGCACAAAGTTAAATGTCCCATTTACTTCGTGCACATGTGTGCTAGTCACTCGGCTCTTATTGGTGTGATTTTAAGGGAGCTGCTGGGCGTTCTCGGCGGTGGCGGCGGTGGAGGGAGTGAACAAGATCAAGACGGGGAGGTTGGTGACGCTGTCGGAGCAGGAGCTGGTGGACTGCGACAC

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Protein seq

MLYTTSDESLMATSQKWHKVKCPIYFVHMCASHSALIGVILRELLGVLGGGGGGGSEQDQDGEVGDAVGAGAGGLRH

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
RI ChrUN-Ctg547 48059 49426 + OsLiXu_Ung0072530.04 OsLiXu_Ung0072530.04,OsLiXu_Ung0072530.03,OsLiXu_Ung0072530.01 All
RI ChrUN-Ctg547 47828 48567 + OsLiXu_Ung0072530.02 OsLiXu_Ung0072530.02,OsLiXu_Ung0072530.01 All
A5 ChrUN-Ctg547 47895 48059 + OsLiXu_Ung0072530.04,OsLiXu_Ung0072530.03 OsLiXu_Ung0072530.04,OsLiXu_Ung0072530.03,OsLiXu_Ung0072530.01 All

Expression

Leaf Root Panicle
FPKM 0.0 0.0 7.406607

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0255300 SBH 0.0 0.124939 29.753477
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g14900 SBH 0.0 0.087392 7.880007
Nipponbare | IRGSP 1.0 | RAP-db Os11g0255300 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0009360 SBH 0.0 3.251710 30.949354
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0009230 SBH 0.0 0.0 14.359083
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0009250 SBH 0.0 0.0 52.815842
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0009070 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0009120 SBH 0.0 0.0 58.479900
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0126400 SBH 0.007308 0.006042 1.7000625
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0009140 SBH 0.0 0.0 9.234270
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0129600 SBH 0.017904 0.0129895 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0009210 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0009310 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0009210 SBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0009100 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0009220 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G009320 SBH 0.0 0.0 7.321618
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0009120 SBH 0.0 0.000000 25.343067
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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