Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0065300 | OGI:99003120 | 2/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg484:372027-379311 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agcaacaattgccctttttttattcatagctctgaagcaaataaattgcatcttcttccacatccaaaatctataccattcagttttgtactcctaaacattcgtgatgattcttaagaacaactccgaccctctgccaaccaaatattcatatatgtacaaatccattttaaaatatcggtataaaagcatgacaaaatcagaggtttaaactataattaaagtggactactaccttaattgtcaaccattttacataatacctgcaaatgcattatcatctacagtatgatccctagtacacatcaaagattaaaattcagcgagagttggctgcagaaatgcagatgcagacagaggcgagaaagcagaatctactctaaaattcagcagcagctcttgctccgggcgcaagccctcgccgccggcggctggccgcgggggctgcacggcccggcgccggcgtcggtgagcatcttcaccacgtccctcatcgtcggccgccccgccggcagcttggcggtgcagagcacggcgaccttgagcaccttgatcatgtcctccctgtccctggcagccgccgccgccgacgacggcgacggcgacggcgccgccacgcgcgggtccagcacgtcgtcgatgctctccgcggcgagcttggttgacagccagaacacgatgtccttcccctcgccgaacgccgggtcgatcgggctccggccggtgacgagctccagcagcacgacgccgaagctgtacacgtccgtcttctccgtcaccttcatggagtaggcgagctctgcgcggaacgtaaatttgattcaaaatcagtacgaaatttgaaacgaatagttcgaatttgggtggagggggaggtgatgagattaccgggggcgaggtagccgtgggttccggcgaagcagctgaactcggcggagtcctcggcggcgatcttggcgatgccgaagtcggcgatcttggcctcgtagtcgtcgtcgaggaggatgttggtggacttgatgtcgcggtggatgatcgccggcgtgcagtcgtggtggaggtacatgagccccttggccgcgccgagcgcgatcttgcaccggcgagcccagtccagctcggcggcggcggcgccgcatccgccgcccttggcctctcgccggagcgcctggtacaggttgccgcgcggcatgtactcgtagacgatgaagttgagctcgccgcgggagaggcaggcgtggagcttgaggatgttccggtgccggatcttgccgaggatggccatctccgcggccattaccctcgccgcgtcgcccttccacaaccgcttcaccgccaccaccgtgccgccgccgcccttgagcgcgaggcggtacacgcgccccgtgccgcccgacccgatcaggttctcctccccgacggcgcatatctcgtcggcgtcgagctccggcgggtggaacgactccagcttccactccgcgccgcacccgccgccctgctccatgtccctcttcttgagctcctccagcttgaagctccggtagctgacgaacaggatgccgacgacgagcagcagcgtcgccgacacgagcaccggcacgaggacgagcgacctccgcgcgagcccgtcgcggcggccgtcctccaccttgcacacgccgagctccgacctgccgccgacgcagagccccgggttgcccgcgaacgccacgtcgccgtcgatcacgagcagcgccggcggcacgttcccggtgagccggttcgacgagaagtcgacggagctcagcttgagcaccaccagctgcgccgggatcgcgccggtgatcgcgttgtgcgacaggttcagcgagttgagcgacgacagcgccgacagcgtcgccgggatcgggcccgtgagcgcgttccgggagacgtcgatctcgacgagccgcgcgcagccgccgatctcgccggggagccggccggtgagcgcgttctcctccaggtgcagcgccgtcagctgcgacaggctcccgatctccggcggtatctcgccggagaacgagttgttcgacaggtacagcttctgaagctgcccgagccgcccgatctccggcgggatctcgccgtcgagatggttgttctgcagccacagctggttcaagctctgcgcgtcgccgatcgccggcgagatgcttccggtgaacccattatccgacacgtcaatgatcgtcacggcggggagaccccacaaccccgccgggaggctgccggtgagcttgttcttgttgatccgaaacctctgcaagctgtcgcacgacgagtactcgtcggggagctcgccggagaagccgttctggagggcgagaaggtactggagattcttgccgtcgcagaggtgcctcgggaacggcccggagaaggcgttctcggagatgtcgacgctgttgagcggcgagaaccggccgaagttcgccgggaactcgccggagaagcggttctcgtaggcggagaagctcttcagcgacctcagctcgccccacgccgccgggatctgcccggagaggttgttccggtagagctgtatcacctcgaacccctcgagcgccgcgagctccggcgggatcccgccggagagctggttccgggacacgtcgatctcccgcagcccggtcagcctcccgagctccggcgggagctcgccggtgaggttgttcccgtacagctcgatcttccacagctgccggaggttgccgatcgccgccgggatcacgccggcgaggttgttcatcgacatgtcgagcgtctccagcgcggcgagctcgaagatggattcaggtatcacccctctcagattcgagctcgccaagtacagatacgtcaagttcttgaggttcccgatgctcgccggcgtctccccgggatcgtagctgttcatcccgacgctgagcgtgacgaggccggagaggttgccgacccacgccgggaacctcccggagaggtcgttgttcgcgacgtcgatggtgtcgagcgccgccagcgccgacaggtccggcagctcgccggcgaggccgttgcaggagaggttcagaaacctgagccgggtgcagctgctcagctcggctggcacgctccccgacagcgagttggagtcgagctcaaggcgtgtcagggtcgtcagcgcggcgattgccggcgatatcctcccggagaggttcatgctcgacagcgagacgcccgtgatggcgccggtcctccggtcgcaccggacgccgaggaagcggcacggcgaggtggtgttggtccatgtctggagattgttgagagggtcggtcaagccggccttgaattggagaagtgcttgggtctgaatttggtggtcagattggcagcttgagctgatggagagtgagaggagtgtgattagagggaggcagatcacaaggatgtgccttctcattgctatggattgtttgtgttgggaaatctgatggcagcagcttgatcacatattcacattggtgtttcagtgttgtcctggtgtctgaaagaaagagagaaaaaaaaataaacaagagatgtcacttgtcagtttgggattcaatttatatagtgctaattagatcagttaaggtgagtgagagttcatcatttgacatgactgaaggttttggaagattctacataatgcctactactagtggtgctatttcctggtggttcagtacatggaatttccataatggaggactagtaactgttatgataacatggcatgcacatgatcagcagtattttttacatgttgtactactttctaaaaattcagagtatggtaacaagccaaatcagaaagcagaattctgtcttcaaaacaaacaacctcagacctaggagaattaattaaacctgaagaaatttctcaaaccaaaaacatgtcattatgaactgttgcaccatatatgtttgtttgccaaaaacacgggagtggattctaatccctcgaggggacatcccctcgtatacctttttctcttaaatttgatgcaaatagttgtgaaaaattctaaaaaaattgacaatgtagagtataatgatacctactagttcaccaaaattcatgttcaaatttgatctacacatcgagaaacaaaaaagataaatttagatataaacagtacactattattcatacgctgaatttgtcttttttatatctcgacgtgtgagttgagtttggacttaagattttgtgaagttgtatatatgtgttgtatgaatgttgtcaaatttttccagaatttttcataaccgtttagattatttttgagcaaacgagggaacatcccctcgagggattagaatagtttccccaaaaacacctttgagctcaaatctttattcccccccccccccccctcatgaaatctcacttcaagcagagtgaaaactttagctcatgcatgatcataaggtcaggctcaaacagtgtgtaggtgccaatgcaaaaactttgtacagctgatatgtgatttggacatttcgaaagatgcttttggtttgttaaccacatgttcagagatcatgaccttccatctaccaccttccatatccctactctgtttccctcttcactacaccatcagcagcaaaattgcactagattgtcaccacatggcacatgaaagattttcccactaaattaatcagataattggggcatgcAaaaaagccagagcactagctgcaaaatgtaatggggacagatgatgaagtgcacacgctgggggggaagaaaagatggtcaaggggcaattttagtgggaatatactttaccagttactattttagtgagacatcagtgtccagcatgccaaatggcctcaacacttatgttttgttggataacaaacccatccttggaacgacacgacaggaccaacctgtaaagacaaactaatttgttggtgatagaattctatgcagtttttggtatttaatctagtaaaacacttttgacctaatttgtttgcctaagattatctgtgcatgtgtcctcgctagaaaatgcataaattttcagttcaaactccatataggttgatcctcacatgattcgtgcacgaacactcccaaacttgactaccaaactactacttttgttgctatgtcaaagtatgatgatatatgtccatcggatagttgtttaactaatcatatgaagctgtcattaattttctggtatgcatagaaaattgtatggttgtcaaaatttccttttccatctacagtagttcaaaattttatatgattatatttttgttattattttgtatatatgttaattatgatgttctgtcataaatatatagcttatgtttaattatactataccttgcaaaatattttattacactgaaactaactaaagattttcaaaatatttgaaaatttgaagactgtatgccctattggacatgctctgtttatgttaactcctaatcgacttcagagaaaacttaatctcatacttatatatttatcaacaatttgatttgttacctgatataccgtgcagtctatttatccgacatcactattattttaaagagaattttacaagataccatgttttatagtgtaaagtttggtatctcccggtactagttcctcgaggtatcaaatattttaattagtgtaaaatttgatacctataaatactttctcaaaaattgtaaaattttcatttcaaatttattttaaattttaatagcatcttccacacgagctgtaacaactataaaaagaaagagttattttttaattttaaaacttatactaccaatagatatcaccataaaagtctcaaattataaatatgactagatgatcccaaagaccacggatcacctaatcatgtacaaagatttaaattttgtttgtcttaaatatcttacaatctacaatcaacaaacaactatacctacataagtgtatatacacaaaagattgaacaaatagagtggtgtttgtagaaccatcactacctactcctccattgaaaagagtaatatatttgcttcattaaacctggttcctcatgttttaagagaagaattttttttctcaccatcttttaccaaaaactgcaaactttttggaaccaaatttgtatttatcatgaagttccttttcaccaaagcataggtgtacgatgtatctaatcagcaagacacagacatcaaaaagctattgatgccctgtttagagctcggtaagatcaattgctatcacacggatcagttcaaaacagagtcttcccacatcggtatcacaaatcacacaaagtttatcaattatcgaagtttcatatactctttagtttgtaccgtcttctcaaaaaaacattgaaaggaagatcgtcttcattatggccggcaaacgtagacatgctgatagacgacatgcatgcactcctttctttttttcaggtttagagcaactgacatgtgggcccatcaggtatcagctactgctcctaatttgtataggcagccctagtgtgtatacatcatagtcaaaatggaaacttccaccaaatacatcaacccataaaggaaaaaagctaattgtaaatttggattgaatagctcaataaccttctaaggttaaaaattaaaacgaagagaaattttatggtgcaatattttacagcgtaaaatttggtatctcaagaatcgctgcgattcaacgatcgtaaaatcattctaaaggtaaagttacagatgacaacaattatttactacctaagtgcatgatgacatgaactccatactgaaactgtggacagctaaccatagcagaactgaaaagaacagctaaacagctaactatgcaatccgagaaagcaattcatcatgaacaaattccatggccagcagaatgcaaacaagacaactcaatcatagataacaaactcatcaacatgagtagctcaaaccaaaacaaaacaaaaaaaaaatcagatacctctcagcttctcctgaaactcccactctgttcttccttcttgaccaaacctgctcttcccaatctctgcttcacttcccttcttccaatccttctcctcacatgaacacacaaagagcaaaagcagcagcagcaagaacaagagcaagaaccaatggagcagcaggaaatcaactgaagctagataagcctctgaacaactcttcagataaaaggaaggcagctgggttttcagtgtggaaggttcagaacagagatgagaggagagagtagcca
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| CDS seq | atgagaaggcacatccttgtgatctgcctccctctaatcacactcctctcactctccatcagctcaagctgccaatctgaccaccaaattcagacccaagcacttctccaattcaaggccggcttgaccgaccctctcaacaatctccagacatggaccaacaccacctcgccgtgccgcttcctcggcgtccggtgcgaccggaggaccggcgccatcacgggcgtctcgctgtcgagcatgaacctctccgggaggatatcgccggcaatcgccgcgctgacgaccctgacacgccttgagctcgactccaactcgctgtcggggagcgtgccagccgagctgagcagctgcacccggctcaggtttctgaacctctcctgcaacggcctcgccggcgagctgccggacctgtcggcgctggcggcgctcgacaccatcgacgtcgcgaacaacgacctctccgggaggttcccggcgtgggtcggcaacctctccggcctcgtcacgctcagcgtcgggatgaacagctacgatcccggggagacgccggcgagcatcgggaacctcaagaacttgacgtatctgtacttggcgagctcgaatctgagaggggtgatacctgaatccatcttcgagctcgccgcgctggagacgctcgacatgtcgatgaacaacctcgccggcgtgatcccggcggcgatcggcaacctccggcagctgtggaagatcgagctgtacgggaacaacctcaccggcgagctcccgccggagctcgggaggctgaccgggctgcgggagatcgacgtgtcccggaaccagctctccggcgggatcccgccggagctcgcggcgctcgaggggttcgaggtgatacagctctaccggaacaacctctccgggcagatcccggcggcgtggggcgagctgaggtcgctgaagagcttctccgcctacgagaaccgcttctccggcgagttcccggcgaacttcggccggttctcgccgctcaacagcgtcgacatctccgagaacgccttctccgggccgttcccgaggcacctctgcgacggcaagaatctccagtaccttctcgccctccagaacggcttctccggcgagctccccgacgagtactcgtcgtgcgacagcttgcagaggtttcggatcaacaagaacaagctcaccggcagcctcccggcggggttgtggggtctccccgccgtgacgatcattgacgtgtcggataatgggttcaccggaagcatctcgccggcgatcggcgacgcgcagagcttgaaccagctgtggctgcagaacaaccatctcgacggcgagatcccgccggagatcgggcggctcgggcagcttcagaagctgtacctgtcgaacaactcgttctccggcgagataccgccggagatcgggagcctgtcgcagctgacggcgctgcacctggaggagaacgcgctcaccggccggctccccggcgagatcggcggctgcgcgcggctcgtcgagatcgacgtctcccggaacgcgctcacgggcccgatcccggcgacgctgtcggcgctgtcgtcgctcaactcgctgaacctgtcgcacaacgcgatcaccggcgcgatcccggcgcagctggtggtgctcaagctgagctccgtcgacttctcgtcgaaccggctcaccgggaacgtgccgccggcgctgctcgtgatcgacggcgacgtggcgttcgcgggcaacccggggctctgcgtcggcggcaggtcggagctcggcgtgtgcaaggtggaggacggccgccgcgacgggctcgcgcggaggtcgctcgtcctcgtgccggtgctcgtgtcggcgacgctgctgctcgtcgtcggcatcctgttcgtcagctaccggagcttcaagctggaggagctcaagaagagggacatggagcagggcggcgggtgcggcgcggagtggaagctggagtcgttccacccgccggagctcgacgccgacgagatatgcgccgtcggggaggagaacctgatcgggtcgggcggcacggggcgcgtgtaccgcctcgcgctcaagggcggcggcggcacggtggtggcggtgaagcggttgtggaagggcgacgcggcgagggtaatggccgcggagatggccatcctcggcaagatccggcaccggaacatcctcaagctccacgcctgcctctcccgcggcgagctcaacttcatcgtctacgagtacatgccgcgcggcaacctgtaccaggcgctccggcgagaggccaagggcggcggatgcggcgccgccgccgccgagctggactgggctcgccggtgcaagatcgcgctcggcgcggccaaggggctcatgtacctccaccacgactgcacgccggcgatcatccaccgcgacatcaagtccaccaacatcctcctcgacgacgactacgaggccaagatcgccgacttcggcatcgccaagatcgccgccgaggactccgccgagttcagctgcttcgccggaacccacggctacctcgcccccgagctcgcctactccatgaaggtgacggagaagacggacgtgtacagcttcggcgtcgtgctgctggagctcgtcaccggccggagcccgatcgacccggcgttcggcgaggggaaggacatcgtgttctggctgtcaaccaagctcgccgcggagagcatcgacgacgtgctggacccgcgcgtggcggcgccgtcgccgtcgccgtcgtcggcggcggcggctgccagggacagggaggacatgatcaaggtgctcaaggtcgccgtgctctgcaccgccaagctgccggcggggcggccgacgatgagggacgtggtgaagatgctcaccgacgccggcgccgggccgtgcagcccccgcggccagccgccggcggcgagggcttgcgcccggagcaagagctgctgctga
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| Protein seq | MRRHILVICLPLITLLSLSISSSCQSDHQIQTQALLQFKAGLTDPLNNLQTWTNTTSPCRFLGVRCDRRTGAITGVSLSSMNLSGRISPAIAALTTLTRLELDSNSLSGSVPAELSSCTRLRFLNLSCNGLAGELPDLSALAALDTIDVANNDLSGRFPAWVGNLSGLVTLSVGMNSYDPGETPASIGNLKNLTYLYLASSNLRGVIPESIFELAALETLDMSMNNLAGVIPAAIGNLRQLWKIELYGNNLTGELPPELGRLTGLREIDVSRNQLSGGIPPELAALEGFEVIQLYRNNLSGQIPAAWGELRSLKSFSAYENRFSGEFPANFGRFSPLNSVDISENAFSGPFPRHLCDGKNLQYLLALQNGFSGELPDEYSSCDSLQRFRINKNKLTGSLPAGLWGLPAVTIIDVSDNGFTGSISPAIGDAQSLNQLWLQNNHLDGEIPPEIGRLGQLQKLYLSNNSFSGEIPPEIGSLSQLTALHLEENALTGRLPGEIGGCARLVEIDVSRNALTGPIPATLSALSSLNSLNLSHNAITGAIPAQLVVLKLSSVDFSSNRLTGNVPPALLVIDGDVAFAGNPGLCVGGRSELGVCKVEDGRRDGLARRSLVLVPVLVSATLLLVVGILFVSYRSFKLEELKKRDMEQGGGCGAEWKLESFHPPELDADEICAVGEENLIGSGGTGRVYRLALKGGGGTVVAVKRLWKGDAARVMAAEMAILGKIRHRNILKLHACLSRGELNFIVYEYMPRGNLYQALRREAKGGGCGAAAAELDWARRCKIALGAAKGLMYLHHDCTPAIIHRDIKSTNILLDDDYEAKIADFGIAKIAAEDSAEFSCFAGTHGYLAPELAYSMKVTEKTDVYSFGVVLLELVTGRSPIDPAFGEGKDIVFWLSTKLAAESIDDVLDPRVAAPSPSPSSAAAAARDREDMIKVLKVAVLCTAKLPAGRPTMRDVVKMLTDAGAGPCSPRGQPPAARACARSKSCC |
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| Function | Receptor protein-tyrosine kinase CEPR2 [UniProtKB/Swiss-Prot:Q9C7T7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0065300 | OsLiXu_Ung0065300.01 | ChrUN-Ctg484 | 372162 | 379311 | - | NAM | ||
| CDS seq | atgagaaggcacatccttgtgatctgcctccctctaatcacactcctctcactctccatcagctcaagctgccaatctgaccaccaaattcagacccaagcacttctccaattcaaggccggcttgaccgaccctctcaacaatctccagacatggaccaacaccacctcgccgtgccgcttcctcggcgtccggtgcgaccggaggaccggcgccatcacgggcgtctcgctgtcgagcatgaacctctccgggaggatatcgccggcaatcgccgcgctgacgaccctgacacgccttgagctcgactccaactcgctgtcggggagcgtgccagccgagctgagcagctgcacccggctcaggtttctgaacctctcctgcaacggcctcgccggcgagctgccggacctgtcggcgctggcggcgctcgacaccatcgacgtcgcgaacaacgacctctccgggaggttcccggcgtgggtcggcaacctctccggcctcgtcacgctcagcgtcgggatgaacagctacgatcccggggagacgccggcgagcatcgggaacctcaagaacttgacgtatctgtacttggcgagctcgaatctgagaggggtgatacctgaatccatcttcgagctcgccgcgctggagacgctcgacatgtcgatgaacaacctcgccggcgtgatcccggcggcgatcggcaacctccggcagctgtggaagatcgagctgtacgggaacaacctcaccggcgagctcccgccggagctcgggaggctgaccgggctgcgggagatcgacgtgtcccggaaccagctctccggcgggatcccgccggagctcgcggcgctcgaggggttcgaggtgatacagctctaccggaacaacctctccgggcagatcccggcggcgtggggcgagctgaggtcgctgaagagcttctccgcctacgagaaccgcttctccggcgagttcccggcgaacttcggccggttctcgccgctcaacagcgtcgacatctccgagaacgccttctccgggccgttcccgaggcacctctgcgacggcaagaatctccagtaccttctcgccctccagaacggcttctccggcgagctccccgacgagtactcgtcgtgcgacagcttgcagaggtttcggatcaacaagaacaagctcaccggcagcctcccggcggggttgtggggtctccccgccgtgacgatcattgacgtgtcggataatgggttcaccggaagcatctcgccggcgatcggcgacgcgcagagcttgaaccagctgtggctgcagaacaaccatctcgacggcgagatcccgccggagatcgggcggctcgggcagcttcagaagctgtacctgtcgaacaactcgttctccggcgagataccgccggagatcgggagcctgtcgcagctgacggcgctgcacctggaggagaacgcgctcaccggccggctccccggcgagatcggcggctgcgcgcggctcgtcgagatcgacgtctcccggaacgcgctcacgggcccgatcccggcgacgctgtcggcgctgtcgtcgctcaactcgctgaacctgtcgcacaacgcgatcaccggcgcgatcccggcgcagctggtggtgctcaagctgagctccgtcgacttctcgtcgaaccggctcaccgggaacgtgccgccggcgctgctcgtgatcgacggcgacgtggcgttcgcgggcaacccggggctctgcgtcggcggcaggtcggagctcggcgtgtgcaaggtggaggacggccgccgcgacgggctcgcgcggaggtcgctcgtcctcgtgccggtgctcgtgtcggcgacgctgctgctcgtcgtcggcatcctgttcgtcagctaccggagcttcaagctggaggagctcaagaagagggacatggagcagggcggcgggtgcggcgcggagtggaagctggagtcgttccacccgccggagctcgacgccgacgagatatgcgccgtcggggaggagaacctgatcgggtcgggcggcacggggcgcgtgtaccgcctcgcgctcaagggcggcggcggcacggtggtggcggtgaagcggttgtggaagggcgacgcggcgagggtaatggccgcggagatggccatcctcggcaagatccggcaccggaacatcctcaagctccacgcctgcctctcccgcggcgagctcaacttcatcgtctacgagtacatgccgcgcggcaacctgtaccaggcgctccggcgagaggccaagggcggcggatgcggcgccgccgccgccgagctggactgggctcgccggtgcaagatcgcgctcggcgcggccaaggggctcatgtacctccaccacgactgcacgccggcgatcatccaccgcgacatcaagtccaccaacatcctcctcgacgacgactacgaggccaagatcgccgacttcggcatcgccaagatcgccgccgaggactccgccgagttcagctgcttcgccggaacccacggctacctcgcccccgagctcgcctactccatgaaggtgacggagaagacggacgtgtacagcttcggcgtcgtgctgctggagctcgtcaccggccggagcccgatcgacccggcgttcggcgaggggaaggacatcgtgttctggctgtcaaccaagctcgccgcggagagcatcgacgacgtgctggacccgcgcgtggcggcgccgtcgccgtcgccgtcgtcggcggcggcggctgccagggacagggaggacatgatcaaggtgctcaaggtcgccgtgctctgcaccgccaagctgccggcggggcggccgacgatgagggacgtggtgaagatgctcaccgacgccggcgccgggccgtgcagcccccgcggccagccgccggcggcgagggcttgcgcccggagcaagagctgctgctga
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| Protein seq | MRRHILVICLPLITLLSLSISSSCQSDHQIQTQALLQFKAGLTDPLNNLQTWTNTTSPCRFLGVRCDRRTGAITGVSLSSMNLSGRISPAIAALTTLTRLELDSNSLSGSVPAELSSCTRLRFLNLSCNGLAGELPDLSALAALDTIDVANNDLSGRFPAWVGNLSGLVTLSVGMNSYDPGETPASIGNLKNLTYLYLASSNLRGVIPESIFELAALETLDMSMNNLAGVIPAAIGNLRQLWKIELYGNNLTGELPPELGRLTGLREIDVSRNQLSGGIPPELAALEGFEVIQLYRNNLSGQIPAAWGELRSLKSFSAYENRFSGEFPANFGRFSPLNSVDISENAFSGPFPRHLCDGKNLQYLLALQNGFSGELPDEYSSCDSLQRFRINKNKLTGSLPAGLWGLPAVTIIDVSDNGFTGSISPAIGDAQSLNQLWLQNNHLDGEIPPEIGRLGQLQKLYLSNNSFSGEIPPEIGSLSQLTALHLEENALTGRLPGEIGGCARLVEIDVSRNALTGPIPATLSALSSLNSLNLSHNAITGAIPAQLVVLKLSSVDFSSNRLTGNVPPALLVIDGDVAFAGNPGLCVGGRSELGVCKVEDGRRDGLARRSLVLVPVLVSATLLLVVGILFVSYRSFKLEELKKRDMEQGGGCGAEWKLESFHPPELDADEICAVGEENLIGSGGTGRVYRLALKGGGGTVVAVKRLWKGDAARVMAAEMAILGKIRHRNILKLHACLSRGELNFIVYEYMPRGNLYQALRREAKGGGCGAAAAELDWARRCKIALGAAKGLMYLHHDCTPAIIHRDIKSTNILLDDDYEAKIADFGIAKIAAEDSAEFSCFAGTHGYLAPELAYSMKVTEKTDVYSFGVVLLELVTGRSPIDPAFGEGKDIVFWLSTKLAAESIDDVLDPRVAAPSPSPSSAAAAARDREDMIKVLKVAVLCTAKLPAGRPTMRDVVKMLTDAGAGPCSPRGQPPAARACARSKSCC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0065300 | OsLiXu_Ung0065300.02 | ChrUN-Ctg484 | 372027 | 379309 | - | NAM | ||
| CDS seq | atgagaaggcacatccttgtgatctgcctccctctaatcacactcctctcactctccatcagctcaagctgccaatctgaccaccaaattcagacccaagcacttctccaattcaaggccggcttgaccgaccctctcaacaatctccagacatggaccaacaccacctcgccgtgccgcttcctcggcgtccggtgcgaccggaggaccggcgccatcacgggcgtctcgctgtcgagcatgaacctctccgggaggatatcgccggcaatcgccgcgctgacgaccctgacacgccttgagctcgactccaactcgctgtcggggagcgtgccagccgagctgagcagctgcacccggctcaggtttctgaacctctcctgcaacggcctcgccggcgagctgccggacctgtcggcgctggcggcgctcgacaccatcgacgtcgcgaacaacgacctctccgggaggttcccggcgtgggtcggcaacctctccggcctcgtcacgctcagcgtcgggatgaacagctacgatcccggggagacgccggcgagcatcgggaacctcaagaacttgacgtatctgtacttggcgagctcgaatctgagaggggtgatacctgaatccatcttcgagctcgccgcgctggagacgctcgacatgtcgatgaacaacctcgccggcgtgatcccggcggcgatcggcaacctccggcagctgtggaagatcgagctgtacgggaacaacctcaccggcgagctcccgccggagctcgggaggctgaccgggctgcgggagatcgacgtgtcccggaaccagctctccggcgggatcccgccggagctcgcggcgctcgaggggttcgaggtgatacagctctaccggaacaacctctccgggcagatcccggcggcgtggggcgagctgaggtcgctgaagagcttctccgcctacgagaaccgcttctccggcgagttcccggcgaacttcggccggttctcgccgctcaacagcgtcgacatctccgagaacgccttctccgggccgttcccgaggcacctctgcgacggcaagaatctccagtaccttctcgccctccagaacggcttctccggcgagctccccgacgagtactcgtcgtgcgacagcttgcagaggtttcggatcaacaagaacaagctcaccggcagcctcccggcggggttgtggggtctccccgccgtgacgatcattgacgtgtcggataatgggttcaccggaagcatctcgccggcgatcggcgacgcgcagagcttgaaccagctgtggctgcagaacaaccatctcgacggcgagatcccgccggagatcgggcggctcgggcagcttcagaagctgtacctgtcgaacaactcgttctccggcgagataccgccggagatcgggagcctgtcgcagctgacggcgctgcacctggaggagaacgcgctcaccggccggctccccggcgagatcggcggctgcgcgcggctcgtcgagatcgacgtctcccggaacgcgctcacgggcccgatcccggcgacgctgtcggcgctgtcgtcgctcaactcgctgaacctgtcgcacaacgcgatcaccggcgcgatcccggcgcagctggtggtgctcaagctgagctccgtcgacttctcgtcgaaccggctcaccgggaacgtgccgccggcgctgctcgtgatcgacggcgacgtggcgttcgcgggcaacccggggctctgcgtcggcggcaggtcggagctcggcgtgtgcaaggtggaggacggccgccgcgacgggctcgcgcggaggtcgctcgtcctcgtgccggtgctcgtgtcggcgacgctgctgctcgtcgtcggcatcctgttcgtcagctaccggagcttcaagctggaggagctcaagaagagggacatggagcagggcggcgggtgcggcgcggagtggaagctggagtcgttccacccgccggagctcgacgccgacgagatatgcgccgtcggggaggagaacctgatcgggtcgggcggcacggggcgcgtgtaccgcctcgcgctcaagggcggcggcggcacggtggtggcggtgaagcggttgtggaagggcgacgcggcgagggtaatggccgcggagatggccatcctcggcaagatccggcaccggaacatcctcaagctccacgcctgcctctcccgcggcgagctcaacttcatcgtctacgagtacatgccgcgcggcaacctgtaccaggcgctccggcgagaggccaagggcggcggatgcggcgccgccgccgccgagctggactgggctcgccggtgcaagatcgcgctcggcgcggccaaggggctcatgtacctccaccacgactgcacgccggcgatcatccaccgcgacatcaagtccaccaacatcctcctcgacgacgactacgaggccaagatcgccgacttcggcatcgccaagatcgccgccgaggactccgccgagttcagctgcttcgccggaacccacggctacctcgcccccgagctcgcctactccatgaaggtgacggagaagacggacgtgtacagcttcggcgtcgtgctgctggagctcgtcaccggccggagcccgatcgacccggcgttcggcgaggggaaggacatcgtgttctggctgtcaaccaagctcgccgcggagagcatcgacgacgtgctggacccgcgcgtggcggcgccgtcgccgtcgccgtcgtcggcggcggcggctgccagggacagggaggacatgatcaaggtgctcaaggtcgccgtgctctgcaccgccaagctgccggcggggcggccgacgatgagggacgtggtgaagatgctcaccgacgccggcgccgggccgtgcagcccccgcggccagccgccggcggcgagggcttgcgcccggagcaagagctgctgctga
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| Protein seq | MRRHILVICLPLITLLSLSISSSCQSDHQIQTQALLQFKAGLTDPLNNLQTWTNTTSPCRFLGVRCDRRTGAITGVSLSSMNLSGRISPAIAALTTLTRLELDSNSLSGSVPAELSSCTRLRFLNLSCNGLAGELPDLSALAALDTIDVANNDLSGRFPAWVGNLSGLVTLSVGMNSYDPGETPASIGNLKNLTYLYLASSNLRGVIPESIFELAALETLDMSMNNLAGVIPAAIGNLRQLWKIELYGNNLTGELPPELGRLTGLREIDVSRNQLSGGIPPELAALEGFEVIQLYRNNLSGQIPAAWGELRSLKSFSAYENRFSGEFPANFGRFSPLNSVDISENAFSGPFPRHLCDGKNLQYLLALQNGFSGELPDEYSSCDSLQRFRINKNKLTGSLPAGLWGLPAVTIIDVSDNGFTGSISPAIGDAQSLNQLWLQNNHLDGEIPPEIGRLGQLQKLYLSNNSFSGEIPPEIGSLSQLTALHLEENALTGRLPGEIGGCARLVEIDVSRNALTGPIPATLSALSSLNSLNLSHNAITGAIPAQLVVLKLSSVDFSSNRLTGNVPPALLVIDGDVAFAGNPGLCVGGRSELGVCKVEDGRRDGLARRSLVLVPVLVSATLLLVVGILFVSYRSFKLEELKKRDMEQGGGCGAEWKLESFHPPELDADEICAVGEENLIGSGGTGRVYRLALKGGGGTVVAVKRLWKGDAARVMAAEMAILGKIRHRNILKLHACLSRGELNFIVYEYMPRGNLYQALRREAKGGGCGAAAAELDWARRCKIALGAAKGLMYLHHDCTPAIIHRDIKSTNILLDDDYEAKIADFGIAKIAAEDSAEFSCFAGTHGYLAPELAYSMKVTEKTDVYSFGVVLLELVTGRSPIDPAFGEGKDIVFWLSTKLAAESIDDVLDPRVAAPSPSPSSAAAAARDREDMIKVLKVAVLCTAKLPAGRPTMRDVVKMLTDAGAGPCSPRGQPPAARACARSKSCC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | ChrUN-Ctg484 | 375549 | 379036 | - | OsLiXu_Ung0065300.02 | OsLiXu_Ung0065300.01,OsLiXu_Ung0065300.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.478564 | 0.0 | 0.514194 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0232100 | SBH | 1.744514 | 2.013854 | 0.168211 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g12530 | SBH | 0.900261 | 1.269237 | 0.102834 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0232100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008270 | SBH | 0.621051 | 84.358185 | 1.784595 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008170 | SBH | 0.821304 | 16.463335 | 0.429861 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0008120 | SBH | 2.254774 | 43.875961 | 0.892556 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0008000 | SBH | 0.265639 | 0.882704 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0008050 | SBH | 8.386749 | 16.199718 | 2.310227 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0107500 | SBH | 0.8157785 | 4.964143 | 0.5962095 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008090 | SBH | 0.178096 | 2.076865 | 0.190827 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0114100 | SBH | 11.139939 | 7.5498485 | 0.3207445 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_Ung0000750 | RBH | 0.229092 | 0.378910 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008230 | SBH | 2.301567 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008200 | SBH | 9.820270 | 44.709995 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0008090 | RBH | 0.000000 | 0.0 | 0.256693 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008170 | SBH | 0.270721 | 17.485800 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008230 | SBH | 0.277780 | 2.305417 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0008090 | RBH | 1.052325 | 27.702665 | 2.112494 |
