Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsAzu_11g0008270 | OGI:11020800 | 16/16 | Azucena | AzucenaRS1 | Gramene(+IsoSeq) | Chr11:6968137-6974899 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CCCTTTTTTTTATTCATAGCTCTGAAGCAAATAAATTGCATCTTCTTCCACATCCAAAATCTATACCATTCAGTTTTGTACTCCTAAACATTCGTGATGATTCTTAAGAACAACTCCGACCCTCTGCCAACCAAATATTCATATATGTACAAATCCATTTTAAAATCTCGGTATAAAAGCATGACAAAATCAGAGGTTTAAACTATAATTAAAGTGGACTACTACCTTAATTGTCAACCATTTTACAAAATACCTGCAAATGCATTATCATCTACAGTATGATCCCTAGTACACAGCAAAGATTAAAATTCAGCGAGAGTTGGCTGCAGAAATGCAGATGCAGACAGAGGCGAGAAAGCAGAGTCTACTCTAAAATTCAGCAGCAGCTCTTGCTCCGGGCGCAAGCCCTCGCCGCCGGCGGCTGGCCGCGGGGGCTGCACGGCCCGGCGCCGGCGTCGGTGAGCATCTTCACCACGTCCCTCATCGTCGGCCGCCCCGCCGGCAGCTTGGCGGTGCAGAGCACGGCGACCTTGAGCACCTTGATCATGTCCTCCCTGTCCCTGGCCGCCGCTGCCGCCGACGACGACGACGACACCGCCGCCACGCGCGGGTCCAGCACGTCGTCGATGCTCTCCGCGGCGAGCTTGGTCGACAGCCAGAACACGATGTCCTTCCCCTCGCCGAACGCCGGGTCGATCGGGCTCCGGCCGGTGATGAGCTCGAGCAGCACGACGCCGAAGCTGTACACGTCCGTCTTCTCCGTCACCTTCATGGAGTAGGCGAGCTCTGCGCGGAACGTAAATTCGATTCAAAATCAGTACGAAATTTGAAAAGAATAGTTCGAATTTGGGTGGGAGTAGTGTGATTAGTGATTACCGGGGGCGAGGTAGCCGTGGGTTCCGGCGAAGCAGCTGAACTCGGCGGAGTCCTCGGCGGCGATCTTGGCGATGCCGAAGTCGGCGATCTTGGCCTCGTAGTCGTCGTCGAGGAGGATGTTGGTGGACTTGATGTCGCGGTGGATGATCGCCGGCGTGCAGTCGTGGTGGAGGTACATGAGCCCCTTGGCCGCGCCGAGCGCGATCTTGCACCGGCGAGGCCAGTCCAGCTCGGCGCCGCCGCCGCTCTTCGCCTCTCGCCGGAGTGCCTGGTACAGGTTGCCGCGCGGCATGTACTCGTAGACGATGAAATTGAGCTCGCCGCGGGAGAGGCAGGCGTGGAGCTTGAGGATGTTCCGGTGCCGGATCTTGCCGAGGATGGCCATCTCCGCCGCCATCACCCTCGCCGCGTCGCCCTTCCACAGCCGCTTCACCGCCACCACCGTGCCGCCGCCGCCCTTGAGCGCGAGGCGGTACACGCGCCCCGTGCCGCCCGACCCGATCAGGTTCTCCTCCCCGACGGCGCATATCTCGTCGGCGTCGAGCTCCGGCGGGTGGAACGACTCCAGCTTCCACTCCGCGCCGCACCCGCCGCCCTGCTCCATGTCCCTCTTCTTGAGCTCCTCCAGCTTGAAGCTCCGGTAGCTGACGAACAGGATGCCGACGACGAGCAGCAGCGTCGCCGACACGAGCACCGGCACGAGGACGAGCGACCTCCGCGCGAGCCCGTCGCGGCGGCCGTCCTCCACCTTGCACACGCCGAGCTCCGACCTGCCGCCGACGCAGAGCCCCGGGTTGCCCGCGAACGCCACGTCGCCGTCGATCACGAGCAGCGCCGGCGGCACGTTCCCGGTGAGCCGGTTCGACGAGAAGTCGACGGAGCTCAGCTTGAGCACCACCAGCTGCGTCGGGATGGCGCCGGTGATCGCGTTGTGCGACAGGTTGAGCGAGTTGAGCGACGACAGCGCCGACAGCGTCGCCGGGATCGGGCCCGTGAGCGCGTTCCGGGAGACGTCGATCTCGACGAGCCGCGCGCAGCCGCCGATCTCGCCGGGGAGCCGGCCGGTCAGCGCGTTCTCCTCCAGGTGCAGCGCCGTCAGCTGCGACAGGCTCCCGATCTCCGGCGGTATCTCGCCGGAGAACGAGTTGTTCGACAGGTACAGCTTCTGAAGCTGCCCGAGCCGCCCGATCTCCGGCGGGATCTCGCCGTCGAGATGGTTGTTCTGCAGCCACAGCTGGTTCAAGCTCTGCGCGTCGCCGATCGCCGGCGAGATGCTTCCGGTGAACCCATTATCCGACACGTCAATGATCGTCACGGCGGGGAGACCCCACAACCCCGCCGGGAGGCTGCCGGTGAGCTTGTTCTTGTTGATCCGAAACCTCTGCAAGCTGTCGCACGACGAGTACTCGTCGGGGAGCTCGCCGGAGAAGCCGTTCTGGAGGGCGAGAAGGTACTGGAGATTCTTGCCGTCGCAGAGGTGCCTCGGGAACGGCCCGGAGAAGGCGTTCTCGGAGATGTCGACGCTGTTGAGCGGCGAGAACCGGCCGAAGTTCGCCGGGAACTCGCCGGAGAAGCGGTTCTCGTAGGCGGAGAAGCTCTTCAGCGACCTCAGCTCGCCCCACGCCGCCGGGATCTGCCCGGAGAGGTTGTTCCGGTAGAGCTGTATTACCTCGAACCCCTGGAGCGCCGCGAGCTCCGGCGGGATCCCGCCGGAGAGCTGGTTCCGGGACACGTCGATCTCCCGCAGCCCGGTCAGCCTCCCGAGCTCCGGCGGGAGCTCGCCGGTGAGGTTGTTCCCGTACAGCTCGATCTTCCACAGCTGCCGGAGGTTGCCGATCGCCGCCGGGATCACGCCGGTAAGGTTGTTCATCGACATGTCCAGCGTCTCCAGCGCGGCGAGCTCGAAGATGGATTCTGGTATCACCCCTCTCAGATTCGAGCTCGCCAAGTACAGATACGTCAAGTTCTTGAGGTTCCCGATGCTCGCCGGCGTCTCGCAGGGATCGTAGCTGTTCATCCCGACGCTGAGCGTGACGAGGCCGGAGAGGTTGCCGACCCACGCCGGGAACCTACCGGAGAGGTCGTTGTTCGCGACGTCGATGGTGTCGAGCGCCGCCAGCGCCGACAGGTCCGGCAGCTCGCCGGCGAGGCCGTTGCAGGAGAGGTTCAGAAACCTGAGCCGGGTGCAGCTGCTCAGCTCGGCTGGCACGCTCCCCGACAGCGAGTTGGAGTCCAGCTCAAGGCGTGTCAGGGTCGTCAGCGCGGCGATCGCCGGCGATATCCTCCCGGAGAGGTTCATGCTCGACAGCGAGACGCCCGTGATGGCGCCGGTCCTCCGGTCGCACCGGACGCCGAGGAAGCGGCACGGCGAGGTGGTGTTGGTCCATGTCTGGAGATTGTTGAGGGGGTCGGTCAAGCCGGCCTTGAACTGGAGAAGTGCTTGGGTCTGAATTTGGTGGTCAGATTGGCAGCTTGAGCTGATGGAGAGTGAGAGGAGTGTGATTAGAGGGAGGCAGATCACAAGGATGTGCCTTCTCATTGTTATGGATTATTTGAGTTGGGAAATCTGATGGCAGCAGCTTGATCACATTGGTGTTTCAGTGTTGTCCTGGTGTCTGAAAGAAAGAGAGAAAAAAAAATAAACAAGAGATGTCACTTTGTCAGTTTGGGATTCAATTTATATAGTGCTAATTAGATCAGTTAAGGTGAGTGAGAGTTCATCATTTGACATGACTGAAGGTTTTGGAAGATTCTACATAATGCCTACTACTAGTGGTGCTATTTCCTAGTGGTTCAGTACATGGAATTTCCACAATGGAGGACTAGTAACTGTTATGATGACATGGCATGCACATGATCAGCAGTATTCTTACTACTTTCTAAAAATTCAGAGTATGGTAACAAGCCAAATCACAAAGCAGACTTCTGTCTTCGAAACAAACAACCTCAGACCTAGGAGTCTCAAAATTAAAGCTGAAGAAATTTCTCAAACCAAAAACATGTCATTATGAACTGTTGCACCATATATATATGTTTGTTTGCTAAAAACACCTTTGAGCTCAAATCTTTAGCTCAAAGATTTGAGCTCTTACTTCAAGCAGAGTGAAAACTTTATCTCATGCATGATCATAAGGTCAGGCTCAAACAGTGTGTAGGTGCCAAAAACTTTGAACAGCTGATTTGTGATTTGGACATTTCGAAAGATGCTTTTGGTTTGTTAACCACATGTTCAGAGATCATGACCTTCCATCTACCACCTTCCATACCCCCTACTCTGTTTCCCTCTTCACTACATCAGAAGCAGCAAAATTGCACTAGATTGTCACCACATGGCACATGAAAAAATTTCCCACTAAATTAATCAAATAATTTGGGCATGCAAAAAAGCCAGAGCACTAGCTGCAAAATGTAATGGGGTCAGATGATGAAGTGCACACTCTACTGGGGGGAAGAAAAGATGGTCAAGGGGCAATTTTAGTGGGAATATACTTTACCAGTTACTATTTTAGTGAGACATCAGTGTCCAGCATGCCAAATGGCTTCAACACTTATGTTTTGTTGGATAACAAACCCATCCTTGGGACGACACGATAGGACCAACCTGTAAAGACAAACTAATTTGTTGGTGATAGAATTCTATGCAGTTTTTGGTATTTAATATAGTAAAACACTTTTGACCTAATTTGTTTACCTAAGATTATCTGTGCATGTGTCCTTGCTAGAAAATGTATAATTTTCAGTTCAAACTCCATATAGGTTGATCCTCACATGATTCGTGCACGAACACTCCCAAACTTGACTACCAAACTACTACTTTTGTTGCTATGTCAAAGTATGATGATATATGTCCATCGGATAGTTGTTTAACTAATCATATGAAGCTGTCATTAATTTTCTGGTATGCATAGAAAATTGTATGGTTGTCAAAATCTCCTTTTCCATCTACTGTAGTTCAAAATTTTATATGATTATATTTTTGTTATTATTTTGTATATATGTTAATTATGATGTTTTGTCATAAATATATAGCTTATGTTTAATTATACTATACCTTGCAAAAATATTTTATTACACTGAAACTAACTAAAGATTTTCAAAATATTTGAAAATTTGAAGACTGTATGCCCTATTGGACATGCACTGTTTATGTTAACTCCCAATCGACTTCAGAGAAAACTTAATCTCATGCTTATATATTTATCAAACCGTGCAGTCTATTTATCCGACATCACTATTATTTTTAAAGAGACTTTTATAAGATAACCTGTTTTATGGTGTAAAGTTTGGTATCTCCAGGTACTAGTTCCTCGAGGTATTAAATATTTTAGTGTAAAATTTAATACCTACAAATACTTTCTCAAGAATTGTAAAATTTTTCATTTTAAATTTTAATAGCATCTTTCACACGAGCTGTAAAAATATAAAAAGAAAGAGTTTTTAAATTTTAAAAATTATACTACCAATAGATGATCCCAGAGACCACGGATCACCTAATCATGTACAAAGATTTAAATTTTGTTTGTATTAAATATCTTACAATCTACAATCAACAAACAACTATACCTACATAAGTGTATATACACAAAAGATTGAACAAATAGAGTGGTGTTTGTAGAACGATCACTACCTACTCCTCCTTTGAAAAGAGTAATATATTTGCTTCATTAAACCTGGTTCCTCATGTTTTAAGAGAAGAATTTTTTTTCTCACCATCTTTTACCAAAAACTGCAAAATTTTTGGAACCAAATTTGTATGTATCATGAAGTTCCTTTTCACCAAAGCATAGGTGTACGATGTATCTAATCAGCAAGACACAGACATCAAAAAGCTACTGATGCCCTGTTTAGAGCTCTGTAAGATCAATTGCTATCACACGGATCAGTTCAAAACAGAATTCATCTCCAGGGGATGAGTCTTCCCACATCGGTATCACAAATCACACAAAGTTCATCAATTATCGAAGTTTCATATACTCTTTAGTTTGTACCGTCCTTTCAAAAAAACATTGAAAGGAAGATCGTCTTCGTTATGGCCGGCAAACGTAGACATGCTGACAGACGACATGCATGCACTCCTTTTCTTTTTTCATGTTTAGAGCAACTGACATGTGGGCCCTGCTGATAATTTGTATAGGCAGCCCTAGTGTGTATACATCATAGTCAAAATGGAAACTTCCACCAAATACATCAACCCATAAAGCCATAAAGGAAAAAAGCTAATTGTAATTTTGGATTGAATAGCTCAATAACCTTCTAAGGTTAAAAATTAAAATGAAGAGAAATTTTATGGTGCAATATTTTACAGCGTAAAATTTGGTATCTCAAGAATCGCTTCAACGATCGTAAAATCATTCTAAAGGTAAAGTTACAGATGACAACAATTATTTACTACCTAAGTGCATGATGACATGAACTCCATACTGAAACTGTGGACAGCTAACCATAGCAGAACTGAAAAGAACAGCTAAATATGCAATCCGAGAAAGCAATTCATCATGAACAAATTCCATGGCCAGCAGAATGCAAACAAGACAACTCAATCATAGATAACAAACCCATCAACATGAGTAGCTCAAAACAAAACAAAACAAAAAAATCAGATACCTCTCAGCTTCTCCTGAAACTCCCACTCTGTTCTTCCTTCTTGACCAAACCTGCTCTTCCCAATCTCGGCTTCACTTCCCTTCTTCCAATCCTTCTCCTCACATGAACACACACCAAGAGCAAAAGCAGCAGCAGCAGCAGCAACAAGAACAAGAGCAAGAACCAATGGAGCAGCAGGAAATCAACTGAAGCTAGATAAGCCTCTGAACAACTCTTCAGATAAAAGGAAGGCAGCTGGGTTTTCAGTGTGGAAGGTTCAGAGGAGAAGAGAGGAGAGAGTAGC
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| CDS seq | ATGAGAAGGCACATCCTTGTGATCTGCCTCCCTCTAATCACACTCCTCTCACTCTCCATCAGCTCAAGCTGCCAATCTGACCACCAAATTCAGACCCAAGCACTTCTCCAGTTCAAGGCCGGCTTGACCGACCCCCTCAACAATCTCCAGACATGGACCAACACCACCTCGCCGTGCCGCTTCCTCGGCGTCCGGTGCGACCGGAGGACCGGCGCCATCACGGGCGTCTCGCTGTCGAGCATGAACCTCTCCGGGAGGATATCGCCGGCGATCGCCGCGCTGACGACCCTGACACGCCTTGAGCTGGACTCCAACTCGCTGTCGGGGAGCGTGCCAGCCGAGCTGAGCAGCTGCACCCGGCTCAGGTTTCTGAACCTCTCCTGCAACGGCCTCGCCGGCGAGCTGCCGGACCTGTCGGCGCTGGCGGCGCTCGACACCATCGACGTCGCGAACAACGACCTCTCCGGTAGGTTCCCGGCGTGGGTCGGCAACCTCTCCGGCCTCGTCACGCTCAGCGTCGGGATGAACAGCTACGATCCCTGCGAGACGCCGGCGAGCATCGGGAACCTCAAGAACTTGACGTATCTGTACTTGGCGAGCTCGAATCTGAGAGGGGTGATACCAGAATCCATCTTCGAGCTCGCCGCGCTGGAGACGCTGGACATGTCGATGAACAACCTTACCGGCGTGATCCCGGCGGCGATCGGCAACCTCCGGCAGCTGTGGAAGATCGAGCTGTACGGGAACAACCTCACCGGCGAGCTCCCGCCGGAGCTCGGGAGGCTGACCGGGCTGCGGGAGATCGACGTGTCCCGGAACCAGCTCTCCGGCGGGATCCCGCCGGAGCTCGCGGCGCTCCAGGGGTTCGAGGTAATACAGCTCTACCGGAACAACCTCTCCGGGCAGATCCCGGCGGCGTGGGGCGAGCTGAGGTCGCTGAAGAGCTTCTCCGCCTACGAGAACCGCTTCTCCGGCGAGTTCCCGGCGAACTTCGGCCGGTTCTCGCCGCTCAACAGCGTCGACATCTCCGAGAACGCCTTCTCCGGGCCGTTCCCGAGGCACCTCTGCGACGGCAAGAATCTCCAGTACCTTCTCGCCCTCCAGAACGGCTTCTCCGGCGAGCTCCCCGACGAGTACTCGTCGTGCGACAGCTTGCAGAGGTTTCGGATCAACAAGAACAAGCTCACCGGCAGCCTCCCGGCGGGGTTGTGGGGTCTCCCCGCCGTGACGATCATTGACGTGTCGGATAATGGGTTCACCGGAAGCATCTCGCCGGCGATCGGCGACGCGCAGAGCTTGAACCAGCTGTGGCTGCAGAACAACCATCTCGACGGCGAGATCCCGCCGGAGATCGGGCGGCTCGGGCAGCTTCAGAAGCTGTACCTGTCGAACAACTCGTTCTCCGGCGAGATACCGCCGGAGATCGGGAGCCTGTCGCAGCTGACGGCGCTGCACCTGGAGGAGAACGCGCTGACCGGCCGGCTCCCCGGCGAGATCGGCGGCTGCGCGCGGCTCGTCGAGATCGACGTCTCCCGGAACGCGCTCACGGGCCCGATCCCGGCGACGCTGTCGGCGCTGTCGTCGCTCAACTCGCTCAACCTGTCGCACAACGCGATCACCGGCGCCATCCCGACGCAGCTGGTGGTGCTCAAGCTGAGCTCCGTCGACTTCTCGTCGAACCGGCTCACCGGGAACGTGCCGCCGGCGCTGCTCGTGATCGACGGCGACGTGGCGTTCGCGGGCAACCCGGGGCTCTGCGTCGGCGGCAGGTCGGAGCTCGGCGTGTGCAAGGTGGAGGACGGCCGCCGCGACGGGCTCGCGCGGAGGTCGCTCGTCCTCGTGCCGGTGCTCGTGTCGGCGACGCTGCTGCTCGTCGTCGGCATCCTGTTCGTCAGCTACCGGAGCTTCAAGCTGGAGGAGCTCAAGAAGAGGGACATGGAGCAGGGCGGCGGGTGCGGCGCGGAGTGGAAGCTGGAGTCGTTCCACCCGCCGGAGCTCGACGCCGACGAGATATGCGCCGTCGGGGAGGAGAACCTGATCGGGTCGGGCGGCACGGGGCGCGTGTACCGCCTCGCGCTCAAGGGCGGCGGCGGCACGGTGGTGGCGGTGAAGCGGCTGTGGAAGGGCGACGCGGCGAGGGTGATGGCGGCGGAGATGGCCATCCTCGGCAAGATCCGGCACCGGAACATCCTCAAGCTCCACGCCTGCCTCTCCCGCGGCGAGCTCAATTTCATCGTCTACGAGTACATGCCGCGCGGCAACCTGTACCAGGCACTCCGGCGAGAGGCGAAGAGCGGCGGCGGCGCCGAGCTGGACTGGCCTCGCCGGTGCAAGATCGCGCTCGGCGCGGCCAAGGGGCTCATGTACCTCCACCACGACTGCACGCCGGCGATCATCCACCGCGACATCAAGTCCACCAACATCCTCCTCGACGACGACTACGAGGCCAAGATCGCCGACTTCGGCATCGCCAAGATCGCCGCCGAGGACTCCGCCGAGTTCAGCTGCTTCGCCGGAACCCACGGCTACCTCGCCCCCGAGCTCGCCTACTCCATGAAGGTGACGGAGAAGACGGACGTGTACAGCTTCGGCGTCGTGCTGCTCGAGCTCATCACCGGCCGGAGCCCGATCGACCCGGCGTTCGGCGAGGGGAAGGACATCGTGTTCTGGCTGTCGACCAAGCTCGCCGCGGAGAGCATCGACGACGTGCTGGACCCGCGCGTGGCGGCGGTGTCGTCGTCGTCGTCGGCGGCAGCGGCGGCCAGGGACAGGGAGGACATGATCAAGGTGCTCAAGGTCGCCGTGCTCTGCACCGCCAAGCTGCCGGCGGGGCGGCCGACGATGAGGGACGTGGTGAAGATGCTCACCGACGCCGGCGCCGGGCCGTGCAGCCCCCGCGGCCAGCCGCCGGCGGCGAGGGCTTGCGCCCGGAGCAAGAGCTGCTGCTGA
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| Protein seq | MRRHILVICLPLITLLSLSISSSCQSDHQIQTQALLQFKAGLTDPLNNLQTWTNTTSPCRFLGVRCDRRTGAITGVSLSSMNLSGRISPAIAALTTLTRLELDSNSLSGSVPAELSSCTRLRFLNLSCNGLAGELPDLSALAALDTIDVANNDLSGRFPAWVGNLSGLVTLSVGMNSYDPCETPASIGNLKNLTYLYLASSNLRGVIPESIFELAALETLDMSMNNLTGVIPAAIGNLRQLWKIELYGNNLTGELPPELGRLTGLREIDVSRNQLSGGIPPELAALQGFEVIQLYRNNLSGQIPAAWGELRSLKSFSAYENRFSGEFPANFGRFSPLNSVDISENAFSGPFPRHLCDGKNLQYLLALQNGFSGELPDEYSSCDSLQRFRINKNKLTGSLPAGLWGLPAVTIIDVSDNGFTGSISPAIGDAQSLNQLWLQNNHLDGEIPPEIGRLGQLQKLYLSNNSFSGEIPPEIGSLSQLTALHLEENALTGRLPGEIGGCARLVEIDVSRNALTGPIPATLSALSSLNSLNLSHNAITGAIPTQLVVLKLSSVDFSSNRLTGNVPPALLVIDGDVAFAGNPGLCVGGRSELGVCKVEDGRRDGLARRSLVLVPVLVSATLLLVVGILFVSYRSFKLEELKKRDMEQGGGCGAEWKLESFHPPELDADEICAVGEENLIGSGGTGRVYRLALKGGGGTVVAVKRLWKGDAARVMAAEMAILGKIRHRNILKLHACLSRGELNFIVYEYMPRGNLYQALRREAKSGGGAELDWPRRCKIALGAAKGLMYLHHDCTPAIIHRDIKSTNILLDDDYEAKIADFGIAKIAAEDSAEFSCFAGTHGYLAPELAYSMKVTEKTDVYSFGVVLLELITGRSPIDPAFGEGKDIVFWLSTKLAAESIDDVLDPRVAAVSSSSSAAAAARDREDMIKVLKVAVLCTAKLPAGRPTMRDVVKMLTDAGAGPCSPRGQPPAARACARSKSCC |
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| Function | Receptor protein-tyrosine kinase CEPR2 [UniProtKB/Swiss-Prot:Q9C7T7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0008270 | OsAzu_11g0008270.01 | Chr11 | 6968137 | 6974897 | - | NAM | ||
| CDS seq | ATGAGAAGGCACATCCTTGTGATCTGCCTCCCTCTAATCACACTCCTCTCACTCTCCATCAGCTCAAGCTGCCAATCTGACCACCAAATTCAGACCCAAGCACTTCTCCAGTTCAAGGCCGGCTTGACCGACCCCCTCAACAATCTCCAGACATGGACCAACACCACCTCGCCGTGCCGCTTCCTCGGCGTCCGGTGCGACCGGAGGACCGGCGCCATCACGGGCGTCTCGCTGTCGAGCATGAACCTCTCCGGGAGGATATCGCCGGCGATCGCCGCGCTGACGACCCTGACACGCCTTGAGCTGGACTCCAACTCGCTGTCGGGGAGCGTGCCAGCCGAGCTGAGCAGCTGCACCCGGCTCAGGTTTCTGAACCTCTCCTGCAACGGCCTCGCCGGCGAGCTGCCGGACCTGTCGGCGCTGGCGGCGCTCGACACCATCGACGTCGCGAACAACGACCTCTCCGGTAGGTTCCCGGCGTGGGTCGGCAACCTCTCCGGCCTCGTCACGCTCAGCGTCGGGATGAACAGCTACGATCCCTGCGAGACGCCGGCGAGCATCGGGAACCTCAAGAACTTGACGTATCTGTACTTGGCGAGCTCGAATCTGAGAGGGGTGATACCAGAATCCATCTTCGAGCTCGCCGCGCTGGAGACGCTGGACATGTCGATGAACAACCTTACCGGCGTGATCCCGGCGGCGATCGGCAACCTCCGGCAGCTGTGGAAGATCGAGCTGTACGGGAACAACCTCACCGGCGAGCTCCCGCCGGAGCTCGGGAGGCTGACCGGGCTGCGGGAGATCGACGTGTCCCGGAACCAGCTCTCCGGCGGGATCCCGCCGGAGCTCGCGGCGCTCCAGGGGTTCGAGGTAATACAGCTCTACCGGAACAACCTCTCCGGGCAGATCCCGGCGGCGTGGGGCGAGCTGAGGTCGCTGAAGAGCTTCTCCGCCTACGAGAACCGCTTCTCCGGCGAGTTCCCGGCGAACTTCGGCCGGTTCTCGCCGCTCAACAGCGTCGACATCTCCGAGAACGCCTTCTCCGGGCCGTTCCCGAGGCACCTCTGCGACGGCAAGAATCTCCAGTACCTTCTCGCCCTCCAGAACGGCTTCTCCGGCGAGCTCCCCGACGAGTACTCGTCGTGCGACAGCTTGCAGAGGTTTCGGATCAACAAGAACAAGCTCACCGGCAGCCTCCCGGCGGGGTTGTGGGGTCTCCCCGCCGTGACGATCATTGACGTGTCGGATAATGGGTTCACCGGAAGCATCTCGCCGGCGATCGGCGACGCGCAGAGCTTGAACCAGCTGTGGCTGCAGAACAACCATCTCGACGGCGAGATCCCGCCGGAGATCGGGCGGCTCGGGCAGCTTCAGAAGCTGTACCTGTCGAACAACTCGTTCTCCGGCGAGATACCGCCGGAGATCGGGAGCCTGTCGCAGCTGACGGCGCTGCACCTGGAGGAGAACGCGCTGACCGGCCGGCTCCCCGGCGAGATCGGCGGCTGCGCGCGGCTCGTCGAGATCGACGTCTCCCGGAACGCGCTCACGGGCCCGATCCCGGCGACGCTGTCGGCGCTGTCGTCGCTCAACTCGCTCAACCTGTCGCACAACGCGATCACCGGCGCCATCCCGACGCAGCTGGTGGTGCTCAAGCTGAGCTCCGTCGACTTCTCGTCGAACCGGCTCACCGGGAACGTGCCGCCGGCGCTGCTCGTGATCGACGGCGACGTGGCGTTCGCGGGCAACCCGGGGCTCTGCGTCGGCGGCAGGTCGGAGCTCGGCGTGTGCAAGGTGGAGGACGGCCGCCGCGACGGGCTCGCGCGGAGGTCGCTCGTCCTCGTGCCGGTGCTCGTGTCGGCGACGCTGCTGCTCGTCGTCGGCATCCTGTTCGTCAGCTACCGGAGCTTCAAGCTGGAGGAGCTCAAGAAGAGGGACATGGAGCAGGGCGGCGGGTGCGGCGCGGAGTGGAAGCTGGAGTCGTTCCACCCGCCGGAGCTCGACGCCGACGAGATATGCGCCGTCGGGGAGGAGAACCTGATCGGGTCGGGCGGCACGGGGCGCGTGTACCGCCTCGCGCTCAAGGGCGGCGGCGGCACGGTGGTGGCGGTGAAGCGGCTGTGGAAGGGCGACGCGGCGAGGGTGATGGCGGCGGAGATGGCCATCCTCGGCAAGATCCGGCACCGGAACATCCTCAAGCTCCACGCCTGCCTCTCCCGCGGCGAGCTCAATTTCATCGTCTACGAGTACATGCCGCGCGGCAACCTGTACCAGGCACTCCGGCGAGAGGCGAAGAGCGGCGGCGGCGCCGAGCTGGACTGGCCTCGCCGGTGCAAGATCGCGCTCGGCGCGGCCAAGGGGCTCATGTACCTCCACCACGACTGCACGCCGGCGATCATCCACCGCGACATCAAGTCCACCAACATCCTCCTCGACGACGACTACGAGGCCAAGATCGCCGACTTCGGCATCGCCAAGATCGCCGCCGAGGACTCCGCCGAGTTCAGCTGCTTCGCCGGAACCCACGGCTACCTCGCCCCCGAGCTCGCCTACTCCATGAAGGTGACGGAGAAGACGGACGTGTACAGCTTCGGCGTCGTGCTGCTCGAGCTCATCACCGGCCGGAGCCCGATCGACCCGGCGTTCGGCGAGGGGAAGGACATCGTGTTCTGGCTGTCGACCAAGCTCGCCGCGGAGAGCATCGACGACGTGCTGGACCCGCGCGTGGCGGCGGTGTCGTCGTCGTCGTCGGCGGCAGCGGCGGCCAGGGACAGGGAGGACATGATCAAGGTGCTCAAGGTCGCCGTGCTCTGCACCGCCAAGCTGCCGGCGGGGCGGCCGACGATGAGGGACGTGGTGAAGATGCTCACCGACGCCGGCGCCGGGCCGTGCAGCCCCCGCGGCCAGCCGCCGGCGGCGAGGGCTTGCGCCCGGAGCAAGAGCTGCTGCTGA
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| Protein seq | MRRHILVICLPLITLLSLSISSSCQSDHQIQTQALLQFKAGLTDPLNNLQTWTNTTSPCRFLGVRCDRRTGAITGVSLSSMNLSGRISPAIAALTTLTRLELDSNSLSGSVPAELSSCTRLRFLNLSCNGLAGELPDLSALAALDTIDVANNDLSGRFPAWVGNLSGLVTLSVGMNSYDPCETPASIGNLKNLTYLYLASSNLRGVIPESIFELAALETLDMSMNNLTGVIPAAIGNLRQLWKIELYGNNLTGELPPELGRLTGLREIDVSRNQLSGGIPPELAALQGFEVIQLYRNNLSGQIPAAWGELRSLKSFSAYENRFSGEFPANFGRFSPLNSVDISENAFSGPFPRHLCDGKNLQYLLALQNGFSGELPDEYSSCDSLQRFRINKNKLTGSLPAGLWGLPAVTIIDVSDNGFTGSISPAIGDAQSLNQLWLQNNHLDGEIPPEIGRLGQLQKLYLSNNSFSGEIPPEIGSLSQLTALHLEENALTGRLPGEIGGCARLVEIDVSRNALTGPIPATLSALSSLNSLNLSHNAITGAIPTQLVVLKLSSVDFSSNRLTGNVPPALLVIDGDVAFAGNPGLCVGGRSELGVCKVEDGRRDGLARRSLVLVPVLVSATLLLVVGILFVSYRSFKLEELKKRDMEQGGGCGAEWKLESFHPPELDADEICAVGEENLIGSGGTGRVYRLALKGGGGTVVAVKRLWKGDAARVMAAEMAILGKIRHRNILKLHACLSRGELNFIVYEYMPRGNLYQALRREAKSGGGAELDWPRRCKIALGAAKGLMYLHHDCTPAIIHRDIKSTNILLDDDYEAKIADFGIAKIAAEDSAEFSCFAGTHGYLAPELAYSMKVTEKTDVYSFGVVLLELITGRSPIDPAFGEGKDIVFWLSTKLAAESIDDVLDPRVAAVSSSSSAAAAARDREDMIKVLKVAVLCTAKLPAGRPTMRDVVKMLTDAGAGPCSPRGQPPAARACARSKSCC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsAzu_11g0008270 | OsAzu_11g0008270.02 | Chr11 | 6968335 | 6974899 | - | IsoSeq | ||
| CDS seq | CTACTCTCTCCTCTCTTCTCCTCTGAACCTTCCACACTGAAAACCCAGCTGCCTTCCTTTTATCTGAAGAGTTGTTCAGAGGCTTATCTAGCTTCAGTTGATTTCCTGCTGCTCCATTGGTTCTTGCTCTTGTTCTTGTTGCTGCTGCTGCTGCTGCTTTTGCTCTTGGTGTGTGTTCATGTGAGGAGAAGGATTGGAAGAAGGGAAGTGAAGCCGAGATTGGGAAGAGCAGGTTTGGTCAAGAAGGAAGAACAGAGTGGGAGTTTCAGGAGA
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| Protein seq | LLSPLFSSEPSTLKTQLPSFYLKSCSEAYLASVDFLLLHWFLLLFLLLLLLLLLLLVCVHVRRRIGRREVKPRLGRAGLVKKEEQSGSFRR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr11 | 6969013 | 6971627 | - | OsAzu_11g0008270.01 | OsAzu_11g0008270.02,OsAzu_11g0008270.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.621051 | 84.358185 | 1.784595 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0232100 | RBH | 1.744514 | 2.013854 | 0.168211 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g12530 | RBH | 0.900261 | 1.269237 | 0.102834 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0232100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008170 | RBH | 0.821304 | 16.463335 | 0.429861 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0008120 | RBH | 2.254774 | 43.875961 | 0.892556 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0008000 | RBH | 0.265639 | 0.882704 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0008050 | RBH | 8.386749 | 16.199718 | 2.310227 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0107600 | RBH | 3.661433 | 63.0245725 | 2.593473 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008090 | RBH | 0.178096 | 2.076865 | 0.190827 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0114100 | RBH | 11.139939 | 7.5498485 | 0.3207445 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0008140 | RBH | 0.062836 | 0.133911 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008230 | RBH | 2.301567 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008200 | RBH | 9.820270 | 44.709995 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0008090 | RBH | 0.000000 | 0.0 | 0.256693 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008170 | RBH | 0.270721 | 17.485800 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008230 | RBH | 0.277780 | 2.305417 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0008090 | RBH | 1.052325 | 27.702665 | 2.112494 |
