Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0059700 | OGI:99056940 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg448:160126-167481 | ||||||||
| Gene Symbol | BGAL12, OsBgal12, OsBGal12 | ||||||||||
| DNA seq | acccatctcatcaacgccttcttgctctctatctctctctttttcgcatccatcttagtattggcaaaagctcgttgtcgtgctccggccatgaagacgacgatggcggcggcggcgacctgcctcgtggcgctgctggtggtggtgctcgcggaggcggccggcgtgggcggcaccaccgtcgcctacaatgaccgcagcctggtgatcgacggcgagcggcgcatcatcatttcaggatctatccattacccgaggagcaccccggaggtataatgaaaattagctatggatatattgatcgctatgcgcatgcatgcatgcatgcaaaaatacgtgtgattgtggtaggtcttagccgtcttttgatattgcacgtacatgagatgagattagtacgtgcgattttggttttgttcttcatatatatgctatacaccaatctcaaaggatcacataaaatctaacagtagccgtcatttatatctactgtaattatttcttatagatcacatttatatctactctagatgtctacaaatttatattctctcagtttttctagtcatacacccgcgcacatcattattctttttttcaccagttgcttggctcataacatcgttatacatatggtcgaatatgactaacagtacgtatttacttaagtagattaatcttcgcatcatactttcacagtacgtataatatcctactagcgatcgatcgactatgatagaatatatgactaacagtacgtatttacttaagtagattaatcttcgcatcgtactttcacagtacgtattaagtactgacatgaagatcagtgttaattagctatacttacaggctactatatgtcgtattaaatagcctaacctcaccatctttattttcattggtctgtcgtatttcaaggctagctagtaaaaaactcagaaatcgtattttcttctgacctcatatatatttcatgaatctcagatacacacacatgccggtatatatataacttatatagttatacactgggaagatgatcccggtgagaaaaaaatcattccgatatgtatacaattaataatgataactttattttcaatttaaatggaaattctagttttatattttgttttgttaatgtggtagtttttaattataattaagatctgctcatgctaatactgggcctgccctggggcagtgtgagcggtgcaatcgcactgggccccacgacttcatgggcccccgggccccggccatgtacacaataatacctctgcctagcctgcacggtcaatacaatttacacataaagcagtaaagcacagattatgtacaggcacgttaacgttagcaaaaaccaggaaacccatcagttcttgcgcagttgcgccgctgctcaggaaacatcatcgctcggcgttgaaaccatctccttcctctcgaaggcctgggctctcctctcaattggcaatcctaattaagcaattggtctctctgggctgccattaattaatctcatcctgaagcctatgttctattcttatattcttagtagtatcttgaacacaaaattcagatagaacttcactaatatctttttgttctatagctactagagttgactggttgagataggagctttaagtgaataggttccttctcagttcttacgatatgtacgtagttaattagtatctctacatcacaatcttcttggttgagtcattcctcttgcagtcttaacactaacagatgacgtgctctttaatttataggggacatataagatattataaacttaaatagtttcaatatttgatgtattccttgtatagcgtttatactattcaattatcaccaaacgttaccaagttcaacatttaagtttataatatcttatatgatgtcttaaagttcaacattttttcctatttaaaataaaaaaaaatattttacatatatatttactagctactagtattgtagggccctttatttttgtctcgtactaggccctcaaaatttcatgactagccaatgatacacgtatatttatcatgtttccctctggtgcagatgtggcctgatctgattaagaaagcaaaggaaggtggccttgacgcgatcgagacctacgtcttctggaacggccatgagccccatcgccgccaggttagttctgtctccgataaaatatgtatactgctttagctgttactgctatttatttagtaagtaatcgaatatgtaaatccacagtaaatattttacgatttaaaactaagcttatgtaattcaaagcaaggctgttccccatgtatataccccatgtatatacggagggagtactatttatttagtaagtaatcgaatatgtaaatctacagtaaatattgattaaaactaagcttatgtaattcaaagcaaggctgttccccatgtatattatttagatgaattgattaaaactaagcttatgtaattcaaagcaaggctgttccccatgtatattatttagatgaattaagcttaatttatacatccttatattccaggctgttccccatctatattatttagatgaattaagctttttattgattaaaactaagcttatgtaattcaaagcaaggctgttccccatgtatattatttagatgaattaagcttaatttatacatccttatattccaggctgttccccatctatattatttggatgaattaaactttttatacatccttatattccttgcgtatagatcgcagtatcgctacttagcttattttgcaaacccgattcttgatatttctaaccaatgcatgaaacaaagtagtataatcgaaattcttgatatttctaaccaatgcatgaaacaaaagtagtataatatatgccatctcctacgatgggtcatatagaagtgactatatattcaaactaagaatatatgccatctcctacgatgtgtgcattttgaaaatttttagcatattctagcaatgttcttctcatgaccttcgtgaaatgttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtagtacaacttacttctcatgaccttcgtgaaatgttttgatatatatgtagtacaactttgaggggaactatgacattatcagatttttcaaggagatccagaatgctggcttatacgctattcttcgcatcgggccatacatttgcggcgaatggaactatgggtacataactgtatatgctcaatcttacacacgtttgtgtgatagataagggaatgttgaatactatttcactagcacactgcactaatcatactttttttaatcgttttcctcatatgcagaggacttcctgcttggctacgtgatattccacaaatgcagttcagaatgcataatgcgccatttgaggtaatgggttataataataaattaattcaaacatgtatatattcatatattatgtatagcaattgaaattttgagcaattgttttgtttcctactgaatagaatgagatggaaaacttcacgactctcattatcaacaagatgaaggatgccaacatgtttgctggtcaaggtggcccaatcatcctggcacaggtgtgatgcatgctagcaccctcgatctgttgccaataatacaagttattcaattacaaatgcattgcttgtatctttatatatatatagtaccgctctattgccaataatttaagttatttaatacaaatgcattgcttgtatctttatattatagatcgaaaacgagtacggaaatgtcatgggccaactgaacaataatcagtctgcgtctgaatacatccattggtgtgcggacatggccaacaagcagaacgtcggtgtcccatggatcatgtgtcagcaagacagtgatgtgccgcacaatgtggtgagcatgactttcaatttgtttaaaataatgtataatgtttgtatgtgtttaaattcttttattgattgtttgaaattcatgccgttgtttcttttcccgattaatttaggtgaacacctgcaacggattctactgccatgattggttcccaaataggactggcatccctaagatttggacagagaactggactggatggTAtatatatatatatttataattttctttcatcacatatatatgtttctcttctattgtaaaagaacttttttaatattcaaatatgaattgaagcacttttgtgactttcattgattcggattaggtttaaagcctgggacaagccggatttccatagatccgccgaagatattgctttcgcagttgcaatgttcttccaaaagcgtggttctctccagaactactacatggtatgtactctcaatttcttgtggctttctcacatatatatatatctcacaaatcaaactaattgttgccatcacaccatttttactagtaccatggtggaacgaattttggtcgcacctcaggtggcccgtacatcacaactagttacgactatgatgcacctttggatgaatatggtgaggaattaacatacaacattttgggctatttaattaaatgcacaattaataagctataaatcatagtataaattttcctttggtttacctatcataattaggtaatcttcggcagccgaaatatggccacttgaaggacctccactctgtgatcaagtccattgagaagattcttgtccatggggaatatgttgataccaactacagtgataatgtcacagtatgattcatgccatacttttgcagaatttccctaatagattcaagttttctagcaaactgatacatgtggttcacattgataatttcttttcaacatatctgatgcattatgatcacttattttctataggttaccaagtacaccttgggctccacctcagcttgtttcatcaacaaccggaatgacaacaaagatcttaacgtaacccttgatggaaacactcaccttctgcctgcttggtctgtgagtatcttgcctgactgcaagaccgttgccttcaatagcgccaaggtatttttccaatcattattgaattctgactatataatttgattgatgcaggatctatgatattacactattgttacaagctaattgttaagattgttttttctttcgttttttttttggaacaattagatcaaagcccaaacgactatcatggtaaagaaggctaacatggtagagaaggagccagagagcttgaaatggtcatggatgcgtgaaaatttgacgcccttcatgattgatgagaagggaagctataggaagaatgagctcttagagcagatcgtcacatcaaccgatcaaagtgattacttgtggtacagaacaaggtattggccaaaaaaacatttttattgcaacttttacatgataagaagcatttttaatgttaacttattattgaataatatgctgcctaattttgacacatataatgaaatgcagccttgaccacaagggtgaggcgagctacactttgttcgtgaacacaacagggcatgaactatatgcctttgtgaatggaatgcttgttggtaagtagctagttaaatttagcttcttgcacaacataacaattcgtggtaattttctcattgagatgttaactatcaatctggttggcaggtaaaaaccattctccaaatggacactttgttttccagcttgagtcagcagtaaaacttcatgatggaaagaactacatttctcttttgagtgctaccattggtctaaaggtttctaatatatttactaaacagttcattaaaagcctgtcactatattttttgtatatgtgttgttgtgtatgatgaaagatatttgttcaatgtcaaacagaactatggccctttgtttgagaagatgcctgctggcattgttggaggaccagttaagttgattgacaacaatggcacagggattgatctctccaacagttcctggtcatataaggtgtacaaaatctctatcaattgtcaattattactatttaattatcaactatatttctatggatatttttaagacttttgatgacgtatgttattaggaaatataccagcaaatttttcccttgattcaatagattgtttagattaattaatactcgtcatattaccactttagttacctcctaagagataagtggagcaccctaaatatatgtttctattgattgtaatattactttgattttctatttctaggctggcttggcaggtgagtataggcagattcacctggacaagcccggttacagatgggacaacaacaatggcaccgtccctatcaacaggccctttacgtggtacaaggtattatataggttgatatgtattatccatattgtattgagctatgaaatagaagtaattcccttgttttatttttctatttagactaccttccaagctccagccggtcaggacacggtggtggtggacctcctagggctgaacaagggcgtggcatgggtgaacgggaacaaccttggccgttactggccatcatatacagcggcggagatgggtggctgccatcactgcgactaccgcggagtttttcaggctgagggcgatggacaaaaatgcctcacgggatgcggtgagccgtcgcaacggtactatcatgttccacgctccttcctcaagaatggcgagcccaacacactcattctcttcgaggaggccggtggcgacccttcacaggtcatcttccacactatcgtggcaggctctgtgtgcgtgtccgctgaggttggggatgccatcacactatcctgcggtcaacacagcaaaaccatctcgaccatcgacgtgaccagctttggtgttgcacatggccagtgcggcgcctatgaaggtgggtgcgagtccaaggctgcgtacaatgctttcacagaagcttgccttgggaaggagtcatgcacagtgcaaatcattaatgctctcaccggctccgggtgcctctccggcgtcctcaccgtccaagcctcatgttgatgcattatcggggtccaataattagatttggtttgtttagattatgctctaggaaaacctggtgcatgtattaagttcaatattaaactagagtcttatatatgtgagttaaattggagtgtgatcaagtaatcgtagattgtgtgatattggaacaatttgcatctatatagtatttttgtgagtgaaaaaattgttgtctttactttgtttcgtggaattaaagaatattttttgggggtttataattttgtaagggtag
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| CDS seq | atgaagacgacgatggcggcggcggcgacctgcctcgtggcgctgctggtggtggtgctcgcggaggcggccggcgtgggcggcaccaccgtcgcctacaatgaccgcagcctggtgatcgacggcgagcggcgcatcatcatttcaggatctatccattacccgaggagcaccccggaggaaggtggccttgacgcgatcgagacctacgtcttctggaacggccatgagccccatcgccgccagtacaactttgaggggaactatgacattatcagatttttcaaggagatccagaatgctggcttatacgctattcttcgcatcgggccatacatttgcggcgaatggaactatggaggacttcctgcttggctacgtgatattccacaaatgcagttcagaatgcataatgcgccatttgagaatgagatggaaaacttcacgactctcattatcaacaagatgaaggatgccaacatgtttgctggtcaaggtggcccaatcatcctggcacagatcgaaaacgagtacggaaatgtcatgggccaactgaacaataatcagtctgcgtctgaatacatccattggtgtgcggacatggccaacaagcagaacgtcggtgtcccatggatcatgtgtcagcaagacagtgatgtgccgcacaatgtggtgaacacctgcaacggattctactgccatgattggttcccaaataggactggcatccctaagatttggacagagaactggactggatggtttaaagcctgggacaagccggatttccatagatccgccgaagatattgctttcgcagttgcaatgttcttccaaaagcgtggttctctccagaactactacatgtaccatggtggaacgaattttggtcgcacctcaggtggcccgtacatcacaactagttacgactatgatgcacctttggatgaatatggtaatcttcggcagccgaaatatggccacttgaaggacctccactctgtgatcaagtccattgagaagattcttgtccatggggaatatgttgataccaactacagtgataatgtcacagttaccaagtacaccttgggctccacctcagcttgtttcatcaacaaccggaatgacaacaaagatcttaacgtaacccttgatggaaacactcaccttctgcctgcttggtctgtgagtatcttgcctgactgcaagaccgttgccttcaatagcgccaagatcaaagcccaaacgactatcatggtaaagaaggctaacatggtagagaaggagccagagagcttgaaatggtcatggatgcgtgaaaatttgacgcccttcatgattgatgagaagggaagctataggaagaatgagctcttagagcagatcgtcacatcaaccgatcaaagtgattacttgtggtacagaacaagccttgaccacaagggtgaggcgagctacactttgttcgtgaacacaacagggcatgaactatatgcctttgtgaatggaatgcttgttggtaaaaaccattctccaaatggacactttgttttccagcttgagtcagcagtaaaacttcatgatggaaagaactacatttctcttttgagtgctaccattggtctaaagaactatggccctttgtttgagaagatgcctgctggcattgttggaggaccagttaagttgattgacaacaatggcacagggattgatctctccaacagtgagtataggcagattcacctggacaagcccggttacagatgggacaacaacaatggcaccgtccctatcaacaggccctttacgtggtacaagactaccttccaagctccagccggtcaggacacggtggtggtggacctcctagggctgaacaagggcgtggcatgggtgaacgggaacaaccttggccgttactggccatcatatacagcggcggagatgggtggctgccatcactgcgactaccgcggagtttttcaggctgagggcgatggacaaaaatgcctcacgggatgcggtgagccgtcgcaacggtactatcatgttccacgctccttcctcaagaatggcgagcccaacacactcattctcttcgaggaggccggtggcgacccttcacaggtcatcttccacactatcgtggcaggctctgtgtgcgtgtccgctgaggttggggatgccatcacactatcctgcggtcaacacagcaaaaccatctcgaccatcgacgtgaccagctttggtgttgcacatggccagtgcggcgcctatgaaggtgggtgcgagtccaaggctgcgtacaatgctttcacagaagcttgccttgggaaggagtcatgcacagtgcaaatcattaatgctctcaccggctccgggtgcctctccggcgtcctcaccgtccaagcctcatgttga
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| Protein seq | MKTTMAAAATCLVALLVVVLAEAAGVGGTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEEGGLDAIETYVFWNGHEPHRRQYNFEGNYDIIRFFKEIQNAGLYAILRIGPYICGEWNYGGLPAWLRDIPQMQFRMHNAPFENEMENFTTLIINKMKDANMFAGQGGPIILAQIENEYGNVMGQLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDSDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYVDTNYSDNVTVTKYTLGSTSACFINNRNDNKDLNVTLDGNTHLLPAWSVSILPDCKTVAFNSAKIKAQTTIMVKKANMVEKEPESLKWSWMRENLTPFMIDEKGSYRKNELLEQIVTSTDQSDYLWYRTSLDHKGEASYTLFVNTTGHELYAFVNGMLVGKNHSPNGHFVFQLESAVKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGTGIDLSNSEYRQIHLDKPGYRWDNNNGTVPINRPFTWYKTTFQAPAGQDTVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMGGCHHCDYRGVFQAEGDGQKCLTGCGEPSQRYYHVPRSFLKNGEPNTLILFEEAGGDPSQVIFHTIVAGSVCVSAEVGDAITLSCGQHSKTISTIDVTSFGVAHGQCGAYEGGCESKAAYNAFTEACLGKESCTVQIINALTGSGCLSGVLTVQASC |
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| Function | Beta-galactosidase 13 [UniProtKB/Swiss-Prot:Q7G3T8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0059700 | OsLiXu_Ung0059700.01 | ChrUN-Ctg448 | 160126 | 167481 | + | NAM | ||
| CDS seq | atgaagacgacgatggcggcggcggcgacctgcctcgtggcgctgctggtggtggtgctcgcggaggcggccggcgtgggcggcaccaccgtcgcctacaatgaccgcagcctggtgatcgacggcgagcggcgcatcatcatttcaggatctatccattacccgaggagcaccccggaggaaggtggccttgacgcgatcgagacctacgtcttctggaacggccatgagccccatcgccgccaggagatccagaatgctggcttatacgctattcttcgcatcgggccatacatttgcggcgaatggaactatggaggacttcctgcttggctacgtgatattccacaaatgcagttcagaatgcataatgcgccatttgagaatgagatggaaaacttcacgactctcattatcaacaagatgaaggatgccaacatgtttgctggtcaaggtggcccaatcatcctggcacagatcgaaaacgagtacggaaatgtcatgggccaactgaacaataatcagtctgcgtctgaatacatccattggtgtgcggacatggccaacaagcagaacgtcggtgtcccatggatcatgtgtcagcaagacagtgatgtgccgcacaatgtggtgaacacctgcaacggattctactgccatgattggttcccaaataggactggcatccctaagatttggacagagaactggactggatggtttaaagcctgggacaagccggatttccatagatccgccgaagatattgctttcgcagttgcaatgttcttccaaaagcgtggttctctccagaactactacatgtaccatggtggaacgaattttggtcgcacctcaggtggcccgtacatcacaactagttacgactatgatgcacctttggatgaatatggtaatcttcggcagccgaaatatggccacttgaaggacctccactctgtgatcaagtccattgagaagattcttgtccatggggaatatgttgataccaactacagtgataatgtcacagttaccaagtacaccttgggctccacctcagcttgtttcatcaacaaccggaatgacaacaaagatcttaacgtaacccttgatggaaacactcaccttctgcctgcttggtctgtgagtatcttgcctgactgcaagaccgttgccttcaatagcgccaagatcaaagcccaaacgactatcatggtaaagaaggctaacatggtagagaaggagccagagagcttgaaatggtcatggatgcgtgaaaatttgacgcccttcatgattgatgagaagggaagctataggaagaatgagctcttagagcagatcgtcacatcaaccgatcaaagtgattacttgtggtacagaacaagccttgaccacaagggtgaggcgagctacactttgttcgtgaacacaacagggcatgaactatatgcctttgtgaatggaatgcttgttggtaaaaaccattctccaaatggacactttgttttccagcttgagtcagcagtaaaacttcatgatggaaagaactacatttctcttttgagtgctaccattggtctaaagaactatggccctttgtttgagaagatgcctgctggcattgttggaggaccagttaagttgattgacaacaatggcacagggattgatctctccaacagtgagtataggcagattcacctggacaagcccggttacagatgggacaacaacaatggcaccgtccctatcaacaggccctttacgtggtacaagactaccttccaagctccagccggtcaggacacggtggtggtggacctcctagggctgaacaagggcgtggcatgggtgaacgggaacaaccttggccgttactggccatcatatacagcggcggagatgggtggctgccatcactgcgactaccgcggagtttttcaggctgagggcgatggacaaaaatgcctcacgggatgcggtgagccgtcgcaacggtactatcatgttccacgctccttcctcaagaatggcgagcccaacacactcattctcttcgaggaggccggtggcgacccttcacaggtcatcttccacactatcgtggcaggctctgtgtgcgtgtccgctgaggttggggatgccatcacactatcctgcggtcaacacagcaaaaccatctcgaccatcgacgtgaccagctttggtgttgcacatggccagtgcggcgcctatgaaggtgggtgcgagtccaaggctgcgtacaatgctttcacagaagcttgccttgggaaggagtcatgcacagtgcaaatcattaatgctctcaccggctccgggtgcctctccggcgtcctcaccgtccaagcctcatgttga
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| Protein seq | MKTTMAAAATCLVALLVVVLAEAAGVGGTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEEGGLDAIETYVFWNGHEPHRRQEIQNAGLYAILRIGPYICGEWNYGGLPAWLRDIPQMQFRMHNAPFENEMENFTTLIINKMKDANMFAGQGGPIILAQIENEYGNVMGQLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDSDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYVDTNYSDNVTVTKYTLGSTSACFINNRNDNKDLNVTLDGNTHLLPAWSVSILPDCKTVAFNSAKIKAQTTIMVKKANMVEKEPESLKWSWMRENLTPFMIDEKGSYRKNELLEQIVTSTDQSDYLWYRTSLDHKGEASYTLFVNTTGHELYAFVNGMLVGKNHSPNGHFVFQLESAVKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGTGIDLSNSEYRQIHLDKPGYRWDNNNGTVPINRPFTWYKTTFQAPAGQDTVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMGGCHHCDYRGVFQAEGDGQKCLTGCGEPSQRYYHVPRSFLKNGEPNTLILFEEAGGDPSQVIFHTIVAGSVCVSAEVGDAITLSCGQHSKTISTIDVTSFGVAHGQCGAYEGGCESKAAYNAFTEACLGKESCTVQIINALTGSGCLSGVLTVQASC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0059700 | OsLiXu_Ung0059700.02 | ChrUN-Ctg448 | 160126 | 167481 | + | NAM | ||
| CDS seq | atgaagacgacgatggcggcggcggcgacctgcctcgtggcgctgctggtggtggtgctcgcggaggcggccggcgtgggcggcaccaccgtcgcctacaatgaccgcagcctggtgatcgacggcgagcggcgcatcatcatttcaggatctatccattacccgaggagcaccccggaggaaggtggccttgacgcgatcgagacctacgtcttctggaacggccatgagccccatcgccgccagtacaactttgaggggaactatgacattatcagatttttcaaggagatccagaatgctggcttatacgctattcttcgcatcgggccatacatttgcggcgaatggaactatggaggacttcctgcttggctacgtgatattccacaaatgcagttcagaatgcataatgcgccatttgagaatgagatggaaaacttcacgactctcattatcaacaagatgaaggatgccaacatgtttgctggtcaaggtggcccaatcatcctggcacagatcgaaaacgagtacggaaatgtcatgggccaactgaacaataatcagtctgcgtctgaatacatccattggtgtgcggacatggccaacaagcagaacgtcggtgtcccatggatcatgtgtcagcaagacagtgatgtgccgcacaatgtggtgaacacctgcaacggattctactgccatgattggttcccaaataggactggcatccctaagatttggacagagaactggactggatggtttaaagcctgggacaagccggatttccatagatccgccgaagatattgctttcgcagttgcaatgttcttccaaaagcgtggttctctccagaactactacatgtaccatggtggaacgaattttggtcgcacctcaggtggcccgtacatcacaactagttacgactatgatgcacctttggatgaatatggtaatcttcggcagccgaaatatggccacttgaaggacctccactctgtgatcaagtccattgagaagattcttgtccatggggaatatgttgataccaactacagtgataatgtcacagttaccaagtacaccttgggctccacctcagcttgtttcatcaacaaccggaatgacaacaaagatcttaacgtaacccttgatggaaacactcaccttctgcctgcttggtctgtgagtatcttgcctgactgcaagaccgttgccttcaatagcgccaagatcaaagcccaaacgactatcatggtaaagaaggctaacatggtagagaaggagccagagagcttgaaatggtcatggatgcgtgaaaatttgacgcccttcatgattgatgagaagggaagctataggaagaatgagctcttagagcagatcgtcacatcaaccgatcaaagtgattacttgtggtacagaacaagccttgaccacaagggtgaggcgagctacactttgttcgtgaacacaacagggcatgaactatatgcctttgtgaatggaatgcttgttggtaaaaaccattctccaaatggacactttgttttccagcttgagtcagcagtaaaacttcatgatggaaagaactacatttctcttttgagtgctaccattggtctaaagaactatggccctttgtttgagaagatgcctgctggcattgttggaggaccagttaagttgattgacaacaatggcacagggattgatctctccaacagtgagtataggcagattcacctggacaagcccggttacagatgggacaacaacaatggcaccgtccctatcaacaggccctttacgtggtacaagactaccttccaagctccagccggtcaggacacggtggtggtggacctcctagggctgaacaagggcgtggcatgggtgaacgggaacaaccttggccgttactggccatcatatacagcggcggagatgggtggctgccatcactgcgactaccgcggagtttttcaggctgagggcgatggacaaaaatgcctcacgggatgcggtgagccgtcgcaacggtactatcatgttccacgctccttcctcaagaatggcgagcccaacacactcattctcttcgaggaggccggtggcgacccttcacaggtcatcttccacactatcgtggcaggctctgtgtgcgtgtccgctgaggttggggatgccatcacactatcctgcggtcaacacagcaaaaccatctcgaccatcgacgtgaccagctttggtgttgcacatggccagtgcggcgcctatgaaggtgggtgcgagtccaaggctgcgtacaatgctttcacagaagcttgccttgggaaggagtcatgcacagtgcaaatcattaatgctctcaccggctccgggtgcctctccggcgtcctcaccgtccaagcctcatgttga
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| Protein seq | MKTTMAAAATCLVALLVVVLAEAAGVGGTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEEGGLDAIETYVFWNGHEPHRRQYNFEGNYDIIRFFKEIQNAGLYAILRIGPYICGEWNYGGLPAWLRDIPQMQFRMHNAPFENEMENFTTLIINKMKDANMFAGQGGPIILAQIENEYGNVMGQLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDSDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKDLHSVIKSIEKILVHGEYVDTNYSDNVTVTKYTLGSTSACFINNRNDNKDLNVTLDGNTHLLPAWSVSILPDCKTVAFNSAKIKAQTTIMVKKANMVEKEPESLKWSWMRENLTPFMIDEKGSYRKNELLEQIVTSTDQSDYLWYRTSLDHKGEASYTLFVNTTGHELYAFVNGMLVGKNHSPNGHFVFQLESAVKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGTGIDLSNSEYRQIHLDKPGYRWDNNNGTVPINRPFTWYKTTFQAPAGQDTVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMGGCHHCDYRGVFQAEGDGQKCLTGCGEPSQRYYHVPRSFLKNGEPNTLILFEEAGGDPSQVIFHTIVAGSVCVSAEVGDAITLSCGQHSKTISTIDVTSFGVAHGQCGAYEGGCESKAAYNAFTEACLGKESCTVQIINALTGSGCLSGVLTVQASC
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0059700 | OsLiXu_Ung0059700.03 | ChrUN-Ctg448 | 160126 | 167372 | + | IsoSeq | ||
| CDS seq | atgattggttcccaaataggactggcatccctaagatttggacagagaactggactggatggtttaaagcctgggacaagccggatttccatagatccgccgaagatattgctttcgcagttgcaatgttcttccaaaagcgtggttctctccagaactactacatgtaccatggtggaacgaattttggtcgcacctcaggtggcccgtacatcacaactagttacgactatgatgcacctttggatgaatatggtaatcttcggcagccgaaatatggcc
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| Protein seq | MIGSQIGLASLRFGQRTGLDGLKPGTSRISIDPPKILLSQLQCSSKSVVLSRTTTCTMVERILVAPQVARTSQLVTTMMHLWMNMVIFGSRNMA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | ChrUN-Ctg448 | 160395 | 162241 | + | OsLiXu_Ung0059700.03 | OsLiXu_Ung0059700.02,OsLiXu_Ung0059700.01,OsLiXu_Ung0059700.03 | All |
| A3 | ChrUN-Ctg448 | 162306 | 163331 | + | OsLiXu_Ung0059700.03,OsLiXu_Ung0059700.02 | OsLiXu_Ung0059700.02,OsLiXu_Ung0059700.01,OsLiXu_Ung0059700.03 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 2.400262 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0330600 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g18400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0330600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0006830 | SBH | 0.0 | 0.0 | 13.357978 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0022980 | SBH | 0.0 | 0.0 | 0.675935 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0006520 | SBH | 0.0 | 0.0 | 13.296243 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0006970 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0023170 | SBH | 0.0 | 0.0 | 6.539180 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0166700 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0006860 | SBH | 0.0 | 0.0 | 2.353123 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0178400 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0006620 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0006660 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0022690 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006550 | RBH | 0.0 | 0.0 | 0.490633 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0022990 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G006790 | SBH | 0.0 | 0.0 | 2.078065 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0006910 | SBH | 0.0 | 0.0 | 20.072815 |
