Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0056390 | OGI:99054470 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg425:36733-39024 | ||||||||
| Gene Symbol | WAK101, OsWAK101, OsRLCK292, RLCK292 | ||||||||||
| DNA seq | ATGGATCTCCCAAAAAACAAGCATAAAGAGTCCATTCAATGGGCAAAATGGATAGAGGACAACATTTCTAATATAAAGCCTTTCACAGAAGAAGATATAAAAAGAATTACCAGTGACTACAGCACCAGTCTTGGAAATGGTAAATTTGGAAAAGTTTACAGGGGAGTTCTTGATGGTAACCGTTATGTTGCAGTGAAGAAATATATTCATATGGATTCTGAACAAGAGTTTGCTAAAGAAGTAATTGTCCACAGTCAAATCAACAATAAGAATGTAGTCAAGCTAATCGGCTACTGTATCGAGAAAAATGCTCTAATGATGGTCATGGACTATATGTCTAATGGAGACCTTGATTACCATCTTCATGTCGAGAATAGCCTTGACTCATTAGACGCAAGATTGAATATTGCTATAGAGTGTGCAGATGCTCTAGGGTATTTGCATTCTATGTGCAGCCCTGTTCTACATGGTGATGTCAAGCCTTCCAACATAGTACTGGGTGACAATTTTAATGCAAAAATATCTGATTTTGGAATATCTAGGCTCCTATCAATAGACAAAACTCATACTGAAAATTTGATAGGGAGTATAGGTTACATGGATCCCCTGTATTACCGGGAGGGGCGTCTCACCCCAAAAAGTGATGTTTATAGTCTTGGAGTTGTTCTTCTGGAACTTATCACCAAGAAAAGGGCAGTTAGTCTCTCTCAAGCTCGTGCTGAAGGAAAGGGAGTGAGAATTGCTTGATCCCAAAATAGCAAATGAGAGCAACATGAAGGTTCTAGTGGAGATTGGAAAATTAGTGCAGGAATGCCTAACAGAGGACATTCATAGACGTCCTGATATGTGCGATGTGGCTGGGCACCTTCGGATGCTTAGGAAATTTTGTTTGAGACAACCTGAACCACAAGAAAATTTTGGTTGGCACCTCTTTCCTGAAACACAGAATAAAGATAAAGAACAAAGCCAGCAAGGTACAAACAATGTCAGCTCCAGTTTGATGGTGTTCCCTAAGATGGGAGGCATTTTCAACCGGAACATGTACAAATCTAGAAAGAAAGGAGCCCCGCTGTATATTAGTGGAAAAAGAATGTTCACAGCACGTGAAATAAAAGTAATAACAAATAACTATTCAACAATTATTGGTGGAGGTGCATTTGGTAATGTCTACCTAGGAATTCTTGAGAAGGATAGAAAGGTGGCAGTGAAGACATACTTAAAAGGAATTAAATGTGAAGAGGATCAATATGGTAAAGAGCTGAACCTTCCCGAACTGATCCATAAGAACATTATCCAACTGTTGGGTTTCTGCTGTGAGCTGGATGCTGTAATATTGGTTCATGAATTTGCTAACAAAGGGAGCCTCTACAACATACTCCATGGTACTAGCAATTTTCCTGTCCCACTAGATTTACGTCTAGATATTGCAATTGGGTCGGCAGAAGGACTGGCATATATGCACAGTAGATCCAAACCCATACTACATGGAGATGTCAAAACAACCCATATACTTCTTGATGACAACATCGTGCCTAAAATCTCAGGTTTTGGATCATCACAGATAGGAGAAGATAATAAATGCAAATGGGCTGTGGCAGCTGACATCAATTACATAGACCGAATGTACATTCAAACCGGACTTTTCACACGGAAGAGTGATGTCTATAGTTTTGGAGTTGTTCTCTTGGAACTCATCACCAGGAAATGAATTTTAGATAGTAAGAAATGCAGTCTTGTTGTCGAGTATGTCAATTGTTATGAGAAAGAAAACAGTGGGAGGATTATGTTTGACAATGAGATCACTGCAGAGGAAAACATGGCCACCCTTGAAGCAATTGGCATTCTAGCAATGAAGTGTTTAAGTGATAATATAGATGAACGACCAGAAATGAGAGAAGTAGCCGAACAACTGGTGATGCTTAAAATGGCTTGGAAGCAGCTCAAAGGAAACATATAAGTTGTCATTTTCAAGACAGCCATGGGAAACCACCAAAGCTTGACACAGAAGATTTATGAGGAATGAAGTAAATTAGCTCACAAGATCCTTTCAGCACTACTTGTTCTACTAGAATCGATCAATTAAGTTTCTCATGTTTGGTGTAATTGTTATCTGAACTTCTGTTAGCATTTGGAACACTAGTTATAGCAGTCTGTATGTTATAAGCAGTAACAGTAATTTGCTACCGCTAGTATTCCTTTTGATCCGTGATTAACAAGTACTATTATCCGACATGTCAAAGGGGTACAATAGCAAGCAAAGTACACACAAATTTAATTTGAACCGTTGTTCTT
More
|
||||||||||
| CDS seq | ATGGATCTCCCAAAAAACAAGCATAAAGAGTCCATTCAATGGGCAAAATGGATAGAGGACAACATTTCTAATATAAAGCCTTTCACAGAAGAAGATATAAAAAGAATTACCAGTGACTACAGCACCAGTCTTGGAAATGGTAAATTTGGAAAAGTTTACAGGGGAGTTCTTGATGGTAACCGTTATGTTGCAGTGAAGAAATATATTCATATGGATTCTGAACAAGAGTTTGCTAAAGAAGTAATTGTCCACAGTCAAATCAACAATAAGAATGTAGTCAAGCTAATCGGCTACTGTATCGAGAAAAATGCTCTAATGATGGTCATGGACTATATGTCTAATGGAGACCTTGATTACCATCTTCATGTCGAGAATAGCCTTGACTCATTAGACGCAAGATTGAATATTGCTATAGAGTGTGCAGATGCTCTAGGGTATTTGCATTCTATGTGCAGCCCTGTTCTACATGGTGATGTCAAGCCTTCCAACATAGTACTGGGTGACAATTTTAATGCAAAAATATCTGATTTTGGAATATCTAGGCTCCTATCAATAGACAAAACTCATACTGAAAATTTGATAGGGAGTATAGGTTACATGGATCCCCTGTATTACCGGGAGGGGCGTCTCACCCCAAAAAGTGATGTTTATAGTCTTGGAGTTGTTCTTCTGGAACTTATCACCAAGAAAAGGGCAGTTAGTCTCTCTCAAGCTCGTGCTGAAGGAAAGGGAGAATGCCTAACAGAGGACATTCATAGACGTCCTGATATGTGCGATGTGGCTGGGCACCTTCGGATGCTTAGGAAATTTTGTTTGAGACAACCTGAACCACAAGAAAATTTTGGTTGGCACCTCTTTCCTGAAACACAGAATAAAGATAAAGAACAAAGCCAGCAAGGTACAAACAATGTCAGCTCCAGTTTGATGGTGTTCCCTAAGATGGGAGGCATTTTCAACCGGAACATGTACAAATCTAGAAAGAAAGGAGCCCCGCTGTATATTAGTGGAAAAAGAATGTTCACAGCACGTGAAATAAAAGTAATAACAAATAACTATTCAACAATTATTGGTGGAGGTGCATTTGGTAATGTCTACCTAGGAATTCTTGAGAAGGATAGAAAGGTGGCAGTGAAGACATACTTAAAAGGAATTAAATGTGAAGAGGATCAATATGGTAAAGAGCTGAACCTTCCCGAACTGATCCATAAGAACATTATCCAACTGTTGGGTTTCTGCTGTGAGCTGGATGCTGTAATATTGGTTCATGAATTTGCTAACAAAGGGAGCCTCTACAACATACTCCATGGTACTAGCAATTTTCCTGTCCCACTAGATTTACGTCTAGATATTGCAATTGGGTCGGCAGAAGGACTGGCATATATGCACAGTAGATCCAAACCCATACTACATGGAGATGTCAAAACAACCCATATACTTCTTGATGACAACATCGTGCCTAAAATCTCAGGTTTTGGATCATCACAGATAGGAGAAGATAATAAATGCAAATGGGCTGTGGCAGCTGACATCAATTACATAGACCGAATGTACATTCAAACCGGACTTTTCACACGGAAGAGTGATGTCTATAGTTTTGGAGTTGTTCTCTTGGAACTCATCACCAGGAAATGA
More
|
||||||||||
| Protein seq | MDLPKNKHKESIQWAKWIEDNISNIKPFTEEDIKRITSDYSTSLGNGKFGKVYRGVLDGNRYVAVKKYIHMDSEQEFAKEVIVHSQINNKNVVKLIGYCIEKNALMMVMDYMSNGDLDYHLHVENSLDSLDARLNIAIECADALGYLHSMCSPVLHGDVKPSNIVLGDNFNAKISDFGISRLLSIDKTHTENLIGSIGYMDPLYYREGRLTPKSDVYSLGVVLLELITKKRAVSLSQARAEGKGECLTEDIHRRPDMCDVAGHLRMLRKFCLRQPEPQENFGWHLFPETQNKDKEQSQQGTNNVSSSLMVFPKMGGIFNRNMYKSRKKGAPLYISGKRMFTAREIKVITNNYSTIIGGGAFGNVYLGILEKDRKVAVKTYLKGIKCEEDQYGKELNLPELIHKNIIQLLGFCCELDAVILVHEFANKGSLYNILHGTSNFPVPLDLRLDIAIGSAEGLAYMHSRSKPILHGDVKTTHILLDDNIVPKISGFGSSQIGEDNKCKWAVAADINYIDRMYIQTGLFTRKSDVYSFGVVLLELITRK |
||||||||||
| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0056390 | OsLiXu_Ung0056390.01 | ChrUN-Ctg425 | 36733 | 39024 | + | NAM | ||
| CDS seq | ATGGATCTCCCAAAAAACAAGCATAAAGAGTCCATTCAATGGGCAAAATGGATAGAGGACAACATTTCTAATATAAAGCCTTTCACAGAAGAAGATATAAAAAGAATTACCAGTGACTACAGCACCAGTCTTGGAAATGGTAAATTTGGAAAAGTTTACAGGGGAGTTCTTGATGGTAACCGTTATGTTGCAGTGAAGAAATATATTCATATGGATTCTGAACAAGAGTTTGCTAAAGAAGTAATTGTCCACAGTCAAATCAACAATAAGAATGTAGTCAAGCTAATCGGCTACTGTATCGAGAAAAATGCTCTAATGATGGTCATGGACTATATGTCTAATGGAGACCTTGATTACCATCTTCATGTCGAGAATAGCCTTGACTCATTAGACGCAAGATTGAATATTGCTATAGAGTGTGCAGATGCTCTAGGGTATTTGCATTCTATGTGCAGCCCTGTTCTACATGGTGATGTCAAGCCTTCCAACATAGTACTGGGTGACAATTTTAATGCAAAAATATCTGATTTTGGAATATCTAGGCTCCTATCAATAGACAAAACTCATACTGAAAATTTGATAGGGAGTATAGGTTACATGGATCCCCTGTATTACCGGGAGGGGCGTCTCACCCCAAAAAGTGATGTTTATAGTCTTGGAGTTGTTCTTCTGGAACTTATCACCAAGAAAAGGGCAGTTAGTCTCTCTCAAGCTCGTGCTGAAGGAAAGGGAGAATGCCTAACAGAGGACATTCATAGACGTCCTGATATGTGCGATGTGGCTGGGCACCTTCGGATGCTTAGGAAATTTTGTTTGAGACAACCTGAACCACAAGAAAATTTTGGTTGGCACCTCTTTCCTGAAACACAGAATAAAGATAAAGAACAAAGCCAGCAAGGTACAAACAATGTCAGCTCCAGTTTGATGGTGTTCCCTAAGATGGGAGGCATTTTCAACCGGAACATGTACAAATCTAGAAAGAAAGGAGCCCCGCTGTATATTAGTGGAAAAAGAATGTTCACAGCACGTGAAATAAAAGTAATAACAAATAACTATTCAACAATTATTGGTGGAGGTGCATTTGGTAATGTCTACCTAGGAATTCTTGAGAAGGATAGAAAGGTGGCAGTGAAGACATACTTAAAAGGAATTAAATGTGAAGAGGATCAATATGGTAAAGAGCTGAACCTTCCCGAACTGATCCATAAGAACATTATCCAACTGTTGGGTTTCTGCTGTGAGCTGGATGCTGTAATATTGGTTCATGAATTTGCTAACAAAGGGAGCCTCTACAACATACTCCATGGTACTAGCAATTTTCCTGTCCCACTAGATTTACGTCTAGATATTGCAATTGGGTCGGCAGAAGGACTGGCATATATGCACAGTAGATCCAAACCCATACTACATGGAGATGTCAAAACAACCCATATACTTCTTGATGACAACATCGTGCCTAAAATCTCAGGTTTTGGATCATCACAGATAGGAGAAGATAATAAATGCAAATGGGCTGTGGCAGCTGACATCAATTACATAGACCGAATGTACATTCAAACCGGACTTTTCACACGGAAGAGTGATGTCTATAGTTTTGGAGTTGTTCTCTTGGAACTCATCACCAGGAAATGA
More
|
|||||||
| Protein seq | MDLPKNKHKESIQWAKWIEDNISNIKPFTEEDIKRITSDYSTSLGNGKFGKVYRGVLDGNRYVAVKKYIHMDSEQEFAKEVIVHSQINNKNVVKLIGYCIEKNALMMVMDYMSNGDLDYHLHVENSLDSLDARLNIAIECADALGYLHSMCSPVLHGDVKPSNIVLGDNFNAKISDFGISRLLSIDKTHTENLIGSIGYMDPLYYREGRLTPKSDVYSLGVVLLELITKKRAVSLSQARAEGKGECLTEDIHRRPDMCDVAGHLRMLRKFCLRQPEPQENFGWHLFPETQNKDKEQSQQGTNNVSSSLMVFPKMGGIFNRNMYKSRKKGAPLYISGKRMFTAREIKVITNNYSTIIGGGAFGNVYLGILEKDRKVAVKTYLKGIKCEEDQYGKELNLPELIHKNIIQLLGFCCELDAVILVHEFANKGSLYNILHGTSNFPVPLDLRLDIAIGSAEGLAYMHSRSKPILHGDVKTTHILLDDNIVPKISGFGSSQIGEDNKCKWAVAADINYIDRMYIQTGLFTRKSDVYSFGVVLLELITRK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.073913 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g05250 | SBH | 2.422634 | 2.218266 | 0.063290 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002330 | SBH | 0.237830 | 1.184180 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0002300 | SBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0002290 | SBH | 0.346326 | 0.000000 | 0.410391 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0002430 | SBH | 0.351010 | 0.023874 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002180 | SBH | 0.864794 | 0.0 | 1.637423 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0044000 | SBH | 0.4939755 | 0.381528 | 0.1221865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0002440 | SBH | 0.080063 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0050000 | SBH | 1.749036 | 0.7416825 | 0.6807755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002260 | SBH | 0.051413 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002280 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0002360 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002180 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0002370 | SBH | 0.0 | 0.625755 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G002330 | SBH | 0.127291 | 0.401368 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0002270 | SBH | 2.226604 | 3.735410 | 0.375197 |
