Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_10g0002260 | OGI:10009510 | 16/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr10:2960971-2964655 | ||||||||
| Gene Symbol | WAK101, OsWAK101, OsRLCK292, RLCK292, WAK103, OsWAK103 | ||||||||||
| DNA seq | gtcgcctccccactccctccgccggtgccattgtccgtctcctcctacgccatcgacgccgcctccacaccagccggccactggtgagcgcgcgtttctcaagagaaattaactgtatacatactagctcgttcgtctgtctagattttctctactgttgttcactagtaatattacgttacaagaatttgttgtcaataaaaaacaaggtgagatctgttcaactagttcttggattacatctgtttggctagttcttgcatcaaagatgtcgatcagaagtttgtatactactagcagagtgaaactcaattttttttattcatcctggaccctctttttcccccgaattactagatatggaatgatattaagatgctgttggtgatgctcttaggaaacggaaaactctgaacagaagtataaattcaacttgccactttgtaatatgtttattaggaacttctttttctttgtttcagactatagattaaaaatggtaccaaagattttagccaagtaccaaaataccacgtataattttatagtataccagtgtaccaccaagatggtcatagagcttgcataagagcaagtttaatagtagagccaactactagctccaaatcatctatagtcaatttaatagccaattcgtacaatagttacatactacactattaatacctggtctcacctatcatacacactgtgtcttgaagtccgtgctacagctggttataaatctgtagcccgctgctcttctctctcctattttctccttaaaatatgtttataattggtttatagtatgctattgtacctgctctaaatgtcgacaggtgctgtttggatcttctatcccaatctgtatctgttttggtaattggatgacttttaccggaagttagactcacacacaactaaatcctcatataattaaaaggtgtcccaaacagggagagacggcataacataatggacaacaaatccttcaccctgaatccaaaagttcaaaggcatacaaatttatcctaaaacttgcggcgcaaaatagagctgaaggcgattgtattctgcaaaatatattaggtcaaatgaaatcaggctcacaccaaacataaaccatttttcttgtcacatgcatataagaaacgacatcgattttcatgagattgttggaaatttaatttaggttatgcttttttgttttataagctgttagcagctcaagttaaggtctgttgcaactctgctttttagggacaattacctttgaaatatagccatatattttttatactatgcacatgtgtggtaaaaaaaaaatctaacaatatcatgtgaccaggccatcatcaatttatttgaagcaagaacgatcatattgtataattataatggatctttcagaaagcaagcacaaagagtatattgaaagggcacaatggatagaggagaatatttctaatataaagcctttcacagaagaagatataaaaagaattaccagtgactacaacaccaatcttggaaatggtggattcggaaaagtttacaagggagttcttgatgataaccgtttcgttgcagtgaagaagtatattaaaatggattctgaagaaatgtttgcccaagaagtacgtgttcacagtcaaatcaaccataaaaatgtagtcaggctaattggctactgcatcgagaaaaatgctccaatgatggtcatggagtatgtgcctaatagggaccttgattaccatcttcatgacaagaatagccttgattcattggacgtaagattggatattgctatagagtgtgcagatgctctagggtatttacattctatgtgcagccctgttctacatggtgatgtaaagccttccaacattctgctggatgacaattttaatgcaaaaataacagattttggaatatcgaggcttctctcaacagacaaaactcatactgttaattgtatagggagtataggttacatggatcccctgtattaccaggaggggcgtctcacccccaaaagtgatgtttatagtattggagttgttcttcgagaacttatcaccaagaaaaaggtggcaagtctggctcaagctcgtgctgaaggaaaaggggtgacagaattgcttgatccgaaaattgcaaacgagagcaacatgatggttctagtggagattggaaaattagtgcaggaatgtctaacagaggacattcatagacgtccggatatgtgcgacgtggctgggcaccttcggatgcttaggaaattctgtttgagacaacctgctccactagaaaattttggttggaacctctttcctgaaacacagaatgaagataaagaacaaagccagcaaggtacaaacaatgtcagctccagtttgatgtcattccctaagatggcaggcattttcaaccggaacatgtacaaatctaggaagaaaggaaccccgctgtatattagtggaaaaagaatgttcacagcacgtgaaataaaagtaataacaaataacaattcaacaattattggtagaggtgcatttggtaatgtctacctaggaattcttgagaatgatagaaaggtggcagtgaagagatacataaaaggaactgaacatgaagaggatcgatgtggtaaagagctgaaccttcccgaactgatccataagaacattatccaactgttgggtttctgttgtaagctggatgctgtaatattggtttatgaatttgctaacaaaaggctctgcgacatactccatggtactagcaattttcctttcccactagatttacgtctagatattgctgttgggtcggcagaaggactggcatatatgcacagtagatccaaacccatactacatggagatgtcaaaacaacccatatacttcttgatgacaacattgtgcctaaaatctcaggttttggatcatcacagataggagaagatagcacatgggttgtggcagctgacatcaattacatagaccgaatgtacattcaaaccggacttttcacacggaagagtgatgtctatagttttggagttgttctcttggaactcatcactaggaaacgaattttagatagtaagaaatgcagtcttgttgtcgagtatgtcaattgttatgagaaagaaaacagtgggaggattatgtttgacaatgagatcactgctgaggaaaacatggccacccttgaagcaattggcattctagcaatgaagtgtttaagtgataatatagatgaacgaccagaaatgagagaagtagccgaacaactggtgatgcttaaaatggcttggaagcagcgcaaaggaaacatataagttgtcacttttaagacagccatgggaaaccaccaaagcttgacacagaagatttatgaggaatgaagtaaattagctcacaagatcttttcagcactacttgttctactagtatcgatcaattaagtttctcatgtttggtgtaattgttatctgaacttatgttggcatttggaacactagttatagcagtctgtatgttataagcagtaacagtaatttgctaccgctagtattccttttgatccgtgattaacaaatactattatccgacatgtcaaaggggtacaatagcaagcaaattacacacaaattttatttgaaccgttgttctt
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| CDS seq | atggatctttcagaaagcaagcacaaagagtatattgaaagggcacaatggatagaggagaatatttctaatataaagcctttcacagaagaagatataaaaagaattaccagtgactacaacaccaatcttggaaatggtggattcggaaaagtttacaagggagttcttgatgataaccgtttcgttgcagtgaagaagtatattaaaatggattctgaagaaatgtttgcccaagaagtacgtgttcacagtcaaatcaaccataaaaatgtagtcaggctaattggctactgcatcgagaaaaatgctccaatgatggtcatggagtatgtgcctaatagggaccttgattaccatcttcatgacaagaatagccttgattcattggacgtaagattggatattgctatagagtgtgcagatgctctagggtatttacattctatgtgcagccctgttctacatggtgatgtaaagccttccaacattctgctggatgacaattttaatgcaaaaataacagattttggaatatcgaggcttctctcaacagacaaaactcatactgttaattgtatagggagtataggttacatggatcccctgtattaccaggaggggcgtctcacccccaaaagtgatgtttatagtattggagttgttcttcgagaacttatcaccaagaaaaaggtggcaagtctggctcaagctcgtgctgaaggaaaaggggtgacagaattgcttgatccgaaaattgcaaacgagagcaacatgatggttctagtggagattggaaaattagtgcaggaatgtctaacagaggacattcatagacgtccggatatgtgcgacgtggctgggcaccttcggatgcttaggaaattctgtttgagacaacctgctccactagaaaattttggttggaacctctttcctgaaacacagaatgaagataaagaacaaagccagcaaggtacaaacaatgtcagctccagtttgatgtcattccctaagatggcaggcattttcaaccggaacatgtacaaatctaggaagaaaggaaccccgctgtatattagtggaaaaagaatgttcacagcacgtgaaataaaagtaataacaaataacaattcaacaattattggtagaggtgcatttggtaatgtctacctaggaattcttgagaatgatagaaaggtggcagtgaagagatacataaaaggaactgaacatgaagaggatcgatgtggtaaagagctgaaccttcccgaactgatccataagaacattatccaactgttgggtttctgttgtaagctggatgctgtaatattggtttatgaatttgctaacaaaaggctctgcgacatactccatggtactagcaattttcctttcccactagatttacgtctagatattgctgttgggtcggcagaaggactggcatatatgcacagtagatccaaacccatactacatggagatgtcaaaacaacccatatacttcttgatgacaacattgtgcctaaaatctcaggttttggatcatcacagataggagaagatagcacatgggttgtggcagctgacatcaattacatagaccgaatgtacattcaaaccggacttttcacacggaagagtgatgtctatagttttggagttgttctcttggaactcatcactaggaaacgaattttagatagtaagaaatgcagtcttgttgtcgagtatgtcaattgttatgagaaagaaaacagtgggaggattatgtttgacaatgagatcactgctgaggaaaacatggccacccttgaagcaattggcattctagcaatgaagtgtttaagtgataatatagatgaacgaccagaaatgagagaagtagccgaacaactggtgatgcttaaaatggcttggaagcagcgcaaaggaaacatataa
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| Protein seq | MDLSESKHKEYIERAQWIEENISNIKPFTEEDIKRITSDYNTNLGNGGFGKVYKGVLDDNRFVAVKKYIKMDSEEMFAQEVRVHSQINHKNVVRLIGYCIEKNAPMMVMEYVPNRDLDYHLHDKNSLDSLDVRLDIAIECADALGYLHSMCSPVLHGDVKPSNILLDDNFNAKITDFGISRLLSTDKTHTVNCIGSIGYMDPLYYQEGRLTPKSDVYSIGVVLRELITKKKVASLAQARAEGKGVTELLDPKIANESNMMVLVEIGKLVQECLTEDIHRRPDMCDVAGHLRMLRKFCLRQPAPLENFGWNLFPETQNEDKEQSQQGTNNVSSSLMSFPKMAGIFNRNMYKSRKKGTPLYISGKRMFTAREIKVITNNNSTIIGRGAFGNVYLGILENDRKVAVKRYIKGTEHEEDRCGKELNLPELIHKNIIQLLGFCCKLDAVILVYEFANKRLCDILHGTSNFPFPLDLRLDIAVGSAEGLAYMHSRSKPILHGDVKTTHILLDDNIVPKISGFGSSQIGEDSTWVVAADINYIDRMYIQTGLFTRKSDVYSFGVVLLELITRKRILDSKKCSLVVEYVNCYEKENSGRIMFDNEITAEENMATLEAIGILAMKCLSDNIDERPEMREVAEQLVMLKMAWKQRKGNI |
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| Function | Wall-associated receptor kinase-like 4 [UniProtKB/Swiss-Prot:Q9S9M2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_10g0002260 | OsLima_10g0002260.01 | Chr10 | 2960971 | 2964655 | + | NAM | ||
| CDS seq | atggatctttcagaaagcaagcacaaagagtatattgaaagggcacaatggatagaggagaatatttctaatataaagcctttcacagaagaagatataaaaagaattaccagtgactacaacaccaatcttggaaatggtggattcggaaaagtttacaagggagttcttgatgataaccgtttcgttgcagtgaagaagtatattaaaatggattctgaagaaatgtttgcccaagaagtacgtgttcacagtcaaatcaaccataaaaatgtagtcaggctaattggctactgcatcgagaaaaatgctccaatgatggtcatggagtatgtgcctaatagggaccttgattaccatcttcatgacaagaatagccttgattcattggacgtaagattggatattgctatagagtgtgcagatgctctagggtatttacattctatgtgcagccctgttctacatggtgatgtaaagccttccaacattctgctggatgacaattttaatgcaaaaataacagattttggaatatcgaggcttctctcaacagacaaaactcatactgttaattgtatagggagtataggttacatggatcccctgtattaccaggaggggcgtctcacccccaaaagtgatgtttatagtattggagttgttcttcgagaacttatcaccaagaaaaaggtggcaagtctggctcaagctcgtgctgaaggaaaaggggtgacagaattgcttgatccgaaaattgcaaacgagagcaacatgatggttctagtggagattggaaaattagtgcaggaatgtctaacagaggacattcatagacgtccggatatgtgcgacgtggctgggcaccttcggatgcttaggaaattctgtttgagacaacctgctccactagaaaattttggttggaacctctttcctgaaacacagaatgaagataaagaacaaagccagcaaggtacaaacaatgtcagctccagtttgatgtcattccctaagatggcaggcattttcaaccggaacatgtacaaatctaggaagaaaggaaccccgctgtatattagtggaaaaagaatgttcacagcacgtgaaataaaagtaataacaaataacaattcaacaattattggtagaggtgcatttggtaatgtctacctaggaattcttgagaatgatagaaaggtggcagtgaagagatacataaaaggaactgaacatgaagaggatcgatgtggtaaagagctgaaccttcccgaactgatccataagaacattatccaactgttgggtttctgttgtaagctggatgctgtaatattggtttatgaatttgctaacaaaaggctctgcgacatactccatggtactagcaattttcctttcccactagatttacgtctagatattgctgttgggtcggcagaaggactggcatatatgcacagtagatccaaacccatactacatggagatgtcaaaacaacccatatacttcttgatgacaacattgtgcctaaaatctcaggttttggatcatcacagataggagaagatagcacatgggttgtggcagctgacatcaattacatagaccgaatgtacattcaaaccggacttttcacacggaagagtgatgtctatagttttggagttgttctcttggaactcatcactaggaaacgaattttagatagtaagaaatgcagtcttgttgtcgagtatgtcaattgttatgagaaagaaaacagtgggaggattatgtttgacaatgagatcactgctgaggaaaacatggccacccttgaagcaattggcattctagcaatgaagtgtttaagtgataatatagatgaacgaccagaaatgagagaagtagccgaacaactggtgatgcttaaaatggcttggaagcagcgcaaaggaaacatataa
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| Protein seq | MDLSESKHKEYIERAQWIEENISNIKPFTEEDIKRITSDYNTNLGNGGFGKVYKGVLDDNRFVAVKKYIKMDSEEMFAQEVRVHSQINHKNVVRLIGYCIEKNAPMMVMEYVPNRDLDYHLHDKNSLDSLDVRLDIAIECADALGYLHSMCSPVLHGDVKPSNILLDDNFNAKITDFGISRLLSTDKTHTVNCIGSIGYMDPLYYQEGRLTPKSDVYSIGVVLRELITKKKVASLAQARAEGKGVTELLDPKIANESNMMVLVEIGKLVQECLTEDIHRRPDMCDVAGHLRMLRKFCLRQPAPLENFGWNLFPETQNEDKEQSQQGTNNVSSSLMSFPKMAGIFNRNMYKSRKKGTPLYISGKRMFTAREIKVITNNNSTIIGRGAFGNVYLGILENDRKVAVKRYIKGTEHEEDRCGKELNLPELIHKNIIQLLGFCCKLDAVILVYEFANKRLCDILHGTSNFPFPLDLRLDIAVGSAEGLAYMHSRSKPILHGDVKTTHILLDDNIVPKISGFGSSQIGEDSTWVVAADINYIDRMYIQTGLFTRKSDVYSFGVVLLELITRKRILDSKKCSLVVEYVNCYEKENSGRIMFDNEITAEENMATLEAIGILAMKCLSDNIDERPEMREVAEQLVMLKMAWKQRKGNI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.051413 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0142600 | RBH | 5.076802 | 4.334194 | 0.182483 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g05250 | RBH | 2.422634 | 2.218266 | 0.063290 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0142600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002330 | RBH | 0.237830 | 1.184180 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0002300 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0002290 | RBH | 0.346326 | 0.000000 | 0.410391 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0002430 | RBH | 0.351010 | 0.023874 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002180 | RBH | 0.864794 | 0.0 | 1.637423 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0044000 | RBH | 0.4939755 | 0.381528 | 0.1221865 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0002440 | RBH | 0.080063 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0050000 | RBH | 1.749036 | 0.7416825 | 0.6807755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002290 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002280 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0002360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002180 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0002370 | RBH | 0.0 | 0.625755 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G002330 | RBH | 0.127291 | 0.401368 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0002270 | RBH | 2.226604 | 3.735410 | 0.375197 |
