Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0047410 | OGI:99048080 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg354:86084-93770 | ||||||||
| Gene Symbol | ERF106, DERF7, OsDERF7, OsERF#106, OsERF106, AP2/EREBP#111, AP2/EREBP111 | ||||||||||
| DNA seq | attacgcgtttccgattggttagcccccccacccctaccggtttcctcacgccaccgctcgatcttgataagcgtcgatgacatggtgggcccacatagccacgggcccacattctgacgagcttatatacgctctccactccggcgtggaggcggcggccgatcagatccagtgcttctcgcggcgaggcgatgtcgtcgtcggcgtcgccggcggcgtggtgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccaggtacgcggcccagcctcacctcttgcagctgatgctcgagattgttccagaagcttacggatctcgcttactcgctttggtctttagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccgggtgagacctcgccgtgatttgtggtttgggtttaaggatccgggtagtggacatctctgcttgagactgtggtggtgattgcggttttgaacctcgtcttcttctgcagctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatgtacgttaagcgatctcggctagcgtttctctcttccgttgttagtgggatcaaatgagtgttggctttctggatttcgctgttagatcgttcggccatgcacaagtagtaagatagtagggtcaatgagggggatcatatgttttatcttctactccatgattaaaatgtcgtggaggcaggttgcatgatatatagtggcataactaaattttcagattatttatgaaaattttcacattgcaaggcgaatgtgatttcaactggctatgttattatgttactcctggttgtaattattcttccgaatgtttcttcagctatgtgatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctaggtatgagaatcactctacaagatgaacgactgtgctacttgtagttatgcagtttatttctgttcaaaaggtagttcatcacttattggtattctctgtcagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtaaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacaggtattatttcaacatctagttgtgaattgtgatgtccagttctttaataccgattatcctaatcatgcctccaagtggtttgttttgttcccaatttatgttgttcagtgttaataaaagttgtcttgaatcatgtttgttgttgatgctcttaatatactgcaagggatgggtaggataaggctggcgaggaattaccataggaaattccagtgtgatatgttgcagtaattataagagttcaatacataacgtagtttgacttgatttgtaatattcatgactgattcttaagtatcatacgtgggacttggtagcaccaaccagcatcgaaaattattttggccttgttatgtacatttagatgttgatgtccggtgtttgatgtgaccatgtcaatcatgtcttcaaacgggtactcttttgtcgctttcattgcttgggatatttctcagttctaataatgctaggagtgtgcccatttagcagatagtacttatgacagcagcaacaacttcaactcgcctactcttattttccttttgccctggtaaatttacgtttagttttcactgttctactcgtaaagattgccatctgcccaatatatttttagggtgtgttcgtttccaccggttgagaaagtcttcccacgcacgcaaaatggagcaaagtcattagcgcatgattaaataaaattagctaaaaaaacttgaaaattgggttaatatgatttttttcctagcaactttcctatagaatttcttttcaaaaaacacaccgtttagcagttcgggaagcgtgccgtggaaaacgagggaatagaagttgggaaagggtagaaaagaactcacccttagtatgttccacagaatgcactctgagtgagacaatggcataagacagataatagtttaatagttagtgttatttatagggttatagcttttatactggtgccaatgattttattttgaactatttgctaccataattattctttttagtctggctttgcttcaagctgatgtatatgcctctttttcagaaatcattcatacgcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaaacaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatgatgattttgagaagatgcatggcaatacaaaagctgctcttgattactatgtttcagtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgtaacacgaaggccactttagatcaccatcaacgaaggccactttagattgccatcatttgatcaacagcaattaatatgtgacttcagaatcttcagatgtgcaaatatggatgagaattttactgcgatagagagcaatgctgacgataaagaagaaactgttcttggtgagatgggatttcacagtcagcatggtggctgggctctgtggagggaagctggctctcgtacagaaatgcatcttggcccgccttctgtttctcctgcgtactgttttgacttttcggtgagttcaaatagtagcaaagacactttcaatttcctctgcctgcatattacgagaattgtgtctacaaaactagtgacctacatttcagttctgaaatgtcatttttaaattgaatatactcacaaggtcgcaattctaaaattcatgagattatatagatggaatttatgatgctcaggaggtaacgagttttgagtgatgtagtagtgactaatgattgagctcatctgtcactaggcattacattacagttacagattctgttctgtagagttgggtaaaaaactggatgcttctatgatgactgattattttaactataggttagtagagctacatctagatattatttcttgaatatggagttgtttggttcttgatgcactatttatttggtttctagaagagtcagaatccagcaactattgattagagtcaatgagatttgtgtttaaaaagttactctgagaacaccatgatgcgtagttgcgtaatcaaccaagattgttgagtgtacaccaattatccacgggttatgattatgaaaacacttaaacaagatgttcaacttgcatgggtcatattcattactccatagcactaataatctgtagggctagtggttgtctcctagttttcatcttgaccagtacacttagataaattggatgaataattggttggtatctgagcatgtgggctctggactaccacttgaatgttgggaagataaccaatggcagttcactcctccactcacagtgcagcggcaagtgacatacgtaatactgattcatttcctatcatttctttgagggaaagcagtgctgaatccatttagatgtaatttttcttctgtgaaaagcacgtcattaaatagtttgaccttgtgtgaacatgcaggacttcaagtcaatggcttaacctgagaaggaagcctcgcagaaacttcccacatctttgtcttgtactttagtcatatacaaactcagaggatgcccacggccttgtatgaaagcttatcttcgctccaatcagaaattattaacaaggaaatattggtttgaagagatttaaatgcaaattgccaatattctattgaaggaaatcaagaggtcaactttaggtacgtgatcttgctatggaccttaatctacttgcaaagctagtataattgtatggtctgaattgacaaagcgtcatactgtatgtcttccacgcatcaattctcagtttctggctttctgcactatcatacttacaagttagcataattgtattcatttaagcgattgaggtgctcttgcactatccatctgaatatctgagaccatatttgtgtaaacacgtgctgaaaatttggagagtatattcctgattccgagcatactctttggtgcaaaacgtgcatactgaaacaaataaagaagtggaaataaggaaatttaaaggtatggatggatggtgtagatggatatctgggaaagggttttgtttgaatttgaactagattagaactatttggctctgtaatgttttcatgtatactggataagcacaccagttacatgtttatccatatggaccatcacatacaaacatcgcatgtggttcctccacatacatggcgcctgcagtccacggcaaccgactgcttatacatatttacagattcaaatatagtatactcaattctattagatatacacatgcatacatataggacataaatctgtatactcctttctgtacgtaaataaattaatagatataattcaaagataaagatggaaaacgagagaagagctgagtcttatcaattcatatacagacgatccagctggtactacaatgcagctaagtactacactgtacacactgctgtttaccatgaagtggttgactataaaggaaacaacttcttgaagtgcccccactgactggctaagctattccagtagcagctgagtcccatccttatcacttctcccatctccttagaccttaagctaacgcaacacgagtgagggctggacacatcatcacaaaagctttataatatatgggctttgtcctgttttctctggatatatcagttactcctcttaccagtgcagctctgcatcgtcagcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagctagctgccacggctaccatgttcggacagcaaggtatgctgatcgatattggatacttggttttgtgatcgattacacatggcttctacttcctttgtctttgtatattgtaattctccagataattcgatcttcttcgccatgaatcacctagtttggaggcattaccaaatggaaaaggctacatgtacaaaaagaaattgttataatttttttactaatgctgacgaataacataggctcaaattagtgagcagatactatatatgattgtctatatagcccagaaaatttcagggaaatcatatgaactttgggacaaaatactgttatcaactttgggacaaaagggtgcgcttgtgacaatgtacagtggttgcggatagaacttactttagtagtttctagctagaaagaataaataatgcgttgttatttgcaagtgaagcacacacgtagctcgctttagccttcaacgtggcaatggcagtgaattattggattgttacttataagatgtaaacccaggtacggtttggtgttgattgatgtagtatgtatgtgagacagagctgtcgactttgtatgtggactcttccttgtagattttgtactatgatgcttgcatgacagcaatagtgttaatttgacgttaaattaatgtctctattcttcattttgatacgtgtctcagtgttctttccatctctacctcaattttgccgtgtgtgcagtgtgctgtgcacatgcatgatatatgcatgaatcatgatgggttgatcgcagtgatgcagcagccgccgcacggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttccccgacgaagtcgccggctccagcatcgccgccgtccagctgccacgccatcatcaacaccaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaatctactgattattcaaattagcatagatagataaccctttacaaaatcagggggaaattctgaaattctgcattttaggagtacaacttaatttgtaataatggaaatggttcacgaattttagtataatcagaaaatagatagtatcatcttgtagcaaagatgaatagatagaacagtgcagtgtgtacatttcattatgtcaacttaacagtgcttggattgaaatgtagattaagtaggagaattaattgtttgtactttgtagtagtaagtggctccatcgatccacttgattcttagagacaaagatgcctttgatggcttgatgcctttgaaa
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| CDS seq | atgtcgtcgtcggcgtcgccggcggcgtggtgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtaaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagtgcaattgaagctgcacgtggggaggacaggaaggcattgactgcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagctagctgccacggctaccatgttcggacagcaagtgatgcagcagccgccgcacggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttccccgacgaagtcgccggctccagcatcgccgccgtccagctgccacgccatcatcaacaccaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MSSSASPAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVARLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDSAIEAARGEDRKALTAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPVTVAPQLAATATMFGQQVMQQPPHGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGSSIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN |
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| Function | O-fucosyltransferase 13 [UniProtKB/Swiss-Prot:Q8RY81] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0047410 | OsLiXu_Ung0047410.02 | ChrUN-Ctg354 | 86084 | 93763 | + | NAM | ||
| CDS seq | atggatgagaattttactgcgatagagagcaatgctgacgataaagaagaaactgttcttggtgagatgggatttcacagtcagcatggtggctgggctctgtggagggaagctggctctcgtacagaaatgcatcttggcccgccttctgtttctcctgcgtactgttttgacttttcgtgcagctctgcatcgtcagcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccgcagccgccgcacggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttccccgacgaagtcgccggctccagcatcgccgccgtccagctgccacgccatcatcaacaccaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MDENFTAIESNADDKEETVLGEMGFHSQHGGWALWREAGSRTEMHLGPPSVSPAYCFDFSCSSASSAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPQPPHGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGSSIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0047410 | OsLiXu_Ung0047410.04 | ChrUN-Ctg354 | 86084 | 93598 | + | NAM | ||
| CDS seq | atggatgagaattttactgcgatagagagcaatgctgacgataaagaagaaactgttcttggtgagatgggatttcacagtcagcatggtggctgggctctgtggagggaagctggctctcgtacagaaatgcatcttggcccgccttctgtttctcctgcgtactgttttgacttttcgtgcagctctgcatcgtcagcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagctagctgccacggctaccatgttcggacagcaagtgatgcagcagccgccgcacggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttccccgacgaagtcgccggctccagcatcgccgccgtccagctgccacgccatcatcaacaccaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MDENFTAIESNADDKEETVLGEMGFHSQHGGWALWREAGSRTEMHLGPPSVSPAYCFDFSCSSASSAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPVTVAPQLAATATMFGQQVMQQPPHGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGSSIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0047410 | OsLiXu_Ung0047410.05 | ChrUN-Ctg354 | 86084 | 90841 | + | NAM | ||
| CDS seq | atgtcgtcgtcggcgtcgccggcggcgtggtgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtaaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagaaatcattcatacgcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaaacaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatgatgattttgagaagatgcatggcaatacaaaagctgctcttgattactatgtttcagtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgtaa
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| Protein seq | MSSSASPAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVARLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDRNHSYAKASYCQGCYNALRLNKNVETKAIELLQAIPKPFLSLHLRFEPDMVAYSRCVYTGLSSKSLSAIEAARGEDRKALTGEAALLWRNRGKCPLTPSETAFILKALGIPTDTNIYLAAGDGLMELEGFTSIYKNIYTKSSLLTHDDFEKMHGNTKAALDYYVSVSSDAYVATFFGNMDKMVTAMRTMQGHQKTLVLSRRAYANYTAVGLSGEQLAMAMWDAHREEYIMGRGSALPEQCFCEFKL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0047410 | OsLiXu_Ung0047410.03 | ChrUN-Ctg354 | 86084 | 93598 | + | NAM | ||
| CDS seq | atgtcgtcgtcggcgtcgccggcggcgtggtgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtaaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagtgcaattgaagctgcacgtggggaggacaggaaggcattgactgcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagctagctgccacggctaccatgttcggacagcaagtgatgcagcagccgccgcacggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttccccgacgaagtcgccggctccagcatcgccgccgtccagctgccacgccatcatcaacaccaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MSSSASPAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVARLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDSAIEAARGEDRKALTAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPVTVAPQLAATATMFGQQVMQQPPHGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGSSIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0047410 | OsLiXu_Ung0047410.01 | ChrUN-Ctg354 | 86084 | 93770 | + | NAM | ||
| CDS seq | atgtcgtcgtcggcgtcgccggcggcgtggtgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgcgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtaaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagaaatcattcatacgcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaaacaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatgatgattttgagaagatgcatggcaatacaaaagctgctcttgattactatgtttcagtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgtaa
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| Protein seq | MSSSASPAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVARLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDRNHSYAKASYCQGCYNALRLNKNVETKAIELLQAIPKPFLSLHLRFEPDMVAYSRCVYTGLSSKSLSAIEAARGEDRKALTGEAALLWRNRGKCPLTPSETAFILKALGIPTDTNIYLAAGDGLMELEGFTSIYKNIYTKSSLLTHDDFEKMHGNTKAALDYYVSVSSDAYVATFFGNMDKMVTAMRTMQGHQKTLVLSRRAYANYTAVGLSGEQLAMAMWDAHREEYIMGRGSALPEQCFCEFKL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | ChrUN-Ctg354 | 87516 | 88763 | + | OsLiXu_Ung0047410.05,OsLiXu_Ung0047410.04,OsLiXu_Ung0047410.02,OsLiXu_Ung0047410.01 | OsLiXu_Ung0047410.05,OsLiXu_Ung0047410.02,OsLiXu_Ung0047410.03,OsLiXu_Ung0047410.04,OsLiXu_Ung0047410.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0537900 | SBH | 0.364254 | 0.0 | 3.423736 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42550 | SBH | 0.119929 | 0.0 | 0.599063 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0537900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023700 | SBH | 0.277844 | 3.163524 | 4.085665 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023490 | SBH | 0.638714 | 2.326997 | 6.002275 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023400 | SBH | 1.523039 | 7.154530 | 4.324948 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0426500 | SBH | 2.279059 | 22.3833935 | 17.4348345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023290 | SBH | 0.023462 | 0.493126 | 0.623192 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0446700 | SBH | 2.2416035 | 43.5334605 | 15.899237 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022690 | SBH | 0.000000 | 0.187176 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023000 | SBH | 0.337112 | 3.482407 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0022820 | SBH | 0.763358 | 29.516428 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023660 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0022990 | SBH | 0.000000 | 5.692369 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023310 | SBH | 0.268350 | 14.620687 | 2.170882 |
