Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_08g0023310 | OGI:08056770 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr08:28406876-28414580 | ||||||||
| Gene Symbol | ERF106, DERF7, OsDERF7, OsERF#106, OsERF106, AP2/EREBP#111, AP2/EREBP111 | ||||||||||
| DNA seq | attacgcgtttccgattggttagCccccccacccctaccggtttcctcacgccaccgctcgatctggataagcgtcgatgacatggtgggcccacatagccacgggcccacattctgacgagcttatatacgctctccactccggcgtggaggcggcggcggccgatcagatccagtgcttctcgcggcgaggcgatgtcgtcgtcggcgtcggcggcggcgtggTgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccaggtacgcggcccagcctcacctcttgcagctgatgctcgagattgttccagaagcttacggatctcgcttactcgcttttggtctttagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccgggtgagacctcgccgtgatttgtggtttgggtttaaggattcgggtagtggacatctctgcttgagactgtggtggtgattgcggttttgaacctcctcttcttctgcagctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatgtacgttaagcgatctcggctagcgtttctctcttccgttgttagtgggatcaaatgagtgttggctttctggatttcgctgttagatcgttcggccatgcacaagtagtaagatagtagggtcaatgagggggatcatatgttttatcttctactccatgattaaaatgtcgtggaggcaggttgcatgatatatagtggcataactaaattttcagattatttatgAaaattttcacattgcaaggcgaatgtgatttcaactggctatgttattatgttactcctggttgtaattattcttccgaatgtttcttcagctatgtgatggaattgcggttgtgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctaggtatgagaatcactctacaagatgaacgactgtgctacttgtagttatgcagtttatttctgttcaaaaggtagttcatcacttattggtattctctgtcagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacaggtattatttcaacatctagttgtgaattgtgatgtccagttctttaataccgattatcctaatcatgcctccaagtggtttgttttgttcccaatttatgttgttcagtgttaataaaagttgtcttgaatcatgtttgttgttgatgctcttaatatactgcaagggatgggtaggataaggctggcgaggaattaccataggaaattccagtgtgatatgttgcagtaattataagagttcaatacataacgtagtttgacttgatttgtaatattcatgactgattcttaagtatcatacgtgggacttggtagcaccaaccagcatcgaaaatTAttttggccttgttatgtacatttagatgttgatgtccGgtgtttgatgtgaccatgtcaatcatgtcttcaaacaggtacTtttttgtcgctttcattgcttgggatatttctcagttctaataatgctaggagtgtgcccatttagcagatagtacttatgacagcagcaacaacttcaactcgcctactcttattttccttttgccctggtaaatttacgtttagttttcactgttctactcgtaaagattgccatctgcccaaTatatttttagggtgtgttcgtttccaccggttgagaaagtcttcccacgcacgcaaaatggagcaaagtcattagcgcatgattaaataaaattagctaaaaaaacttgaaaattgggttaatatgatttttttcctagcaactttcctatagaatttcttttgcaaaaaaacacaccgtttagcagttcgggaagcgtgccgtggaaaacgagggaatagaagttgggaaagggtagaaaagaactcacccttagtatgttccacagaatgcactctgagtgagacaatggcataagacagataatagtttaatagttagtgttatttatagggttatagcttttatactggtgccaatgattttaTtttgaactatttgctaccataattattctttttagtctggctttgcttcaagctgatgtatatgcctctttttcagaaatccttcatacgcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaaacaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatgatgattttgagaagatgcatggcaatacaaaagccgctcttgattactatgTttcagtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgtaacacgaaggccactttagatcgccatcaacgaaggccactttagattgccatcatttgatcaacagcaattaatatgtgacttcagaatcttcagatgtgcaaatatggatgagaattttactgcgatagagagcaatgctgacgataaagaagaaactgttcttggtgagatgggatttcacagtcagcatggtggctgggctctgtggagggaagctggctctcgtacagaaatgcatcttggcccgccttctgtttctcctgcgtactgttttgacttttcggtgagttcaaatagtagcaaagacactttcaatttcctctgcctgcatattacgagaattgtgtctacaaaactagtgacctacatttcagttctgaaatgtcaTttttaaattgaatatactcacaaggtctcaattctaaaattcatgagattatatagatggaatttatgatgctcaggaggtaacgagttgtgagtgatgtagtagtgactaatgattgagctcatctgtcactaggcattacattacagttacagattctgttctgtagagttgggtaaaaaactggatgcttctatgatgactgattattttaactataggttagtagagctacgtctagatattatttcttgaatatggagttgtttggttcttgatgcactatttatttggtttctagaagagtcagaatccagcaactattgattagagtcaatgagatttgtgtttaaaaagttactctgagaacaccatgatgcgtagttgcgtaatcaaccaagattgttgagtgtacaccaattatccacgggttatgattatgaaaacacttaaacaagatgttcaacttgcatgggtcatattcattactccatagcactaataatctgtaggactagtggttgtctcctagttttcatcttgaccagtacacttagataaattggaagaataattggttggtatctgagcatgtgggctctggactaccacttgaatgttgggaagataaccaatggcagttcactcctccactcacagtgcagcggcaagtgacatacgtaatactgattcatttcctatcatttctttgagggaaagcagtgctgaatccatttagatgtaatttttcttctgtgaaaagcacgtcattaaatagtttgaccttgtgtgaacatgcaggacttcaagtcaatggcttaacctgagaaggaagcctcgcagaaacttcccacatctttgtcttgtactttagtcatatacaaactcagaggatgcccacggccttgtatgaaagcttatcttcgctccaatcagaaattaTtaacaaggaaatattggtttgaagagatttaaatgcaaattgccaatattctattgaaggaaatcaagaggtcaactttaggtacgtgatcttgctatggaccttaatctacttgcaaagctagtataattgtatggtctgaattgacaaagcgtcatactgtatgtcttccacgcatcaattctcagtttctggctttctgcactatcatacttacaagttagcataattgtattcatttaagcgattgaggtgctcttgcactatccatctgaatatctgagaccatatttgtgtaaacacgtgctgaaaatttggagagtatattcctgattccgagcatactctttggtgcaaaacgtgcatactgaaacaaataaagaagtggaaataaggaaatttaaaggtatggatggatggtgtagatggatatctgggaaagggttttgtttgaatttgaactagattagaactatttggctctgtaatgttttcatgtatactggataagcacaccagttacatgcttatccatatggaccatcacatacaaacatcgcatgtggttcctccacatacatggcgcctgcagtccacggcaaccgactgcttgtacatatttacagattcaaatatagtatactcaattctattagatatacacatgcatacatatgggacataaatctgtatactcctttctgtacgtaaataaattaatagatataattcaaagataaagatggaaaacgagagaagagctgagtcttatcaattcatatacagacgatccagctggtactacaatgcagctaagtactacactgtacacactgctgtttaccatgaagtggttgactataaaggaaacagcttcttgaagtgCccccactgactggctaagctattccagtagcagctgagtcccatccttatcacttctcccatctccttagaccttaagctaaggcagcacgagtgagggctggacacatcatcacaaaagctttataatatatgggctttgtcctgttttctctggatatatcagttactcctcttaccagtgcagctctgcatcgtcagcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgccggcggcgccgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagcgagctgccacggctaccatgttcggacagcaaggtacgctgatcgatattggatacttggttttgtgatcgattacacatggcttctacttcctctgtctttgtatattgtaattctccagataattcgatcttcttcgccatgaatcacctagtttggaggcattaccaaatggaaaaggctacacgtacaaaaagaaattgttataatttttttactaatgctgacgaataacataggctcaaattagtgagcagatactatatatgattgtctatatagcccagaaaatttcagggaaatcatatgaactttgggacaaaatactgttatcaactttgggacaaaagggtgcgcttgtgacaatgtacagtggttgcggatagaacttactttagtagTttctagctagaaagaataaataatgcgttgttatttgcaagtgaagcacacacgtagctcgctttagccttcaacgtggcaatggcagtgaattattggattgttgcttataagatgtaaacccaggtacggtttggtgttgattgatgtagtatgtatgtgagacagagctgtcgactttgtatgtggactcttccttgtagattttgtactatgatgcttgcatgacagcaatagtgttaatttgacgttaaattaatgtctctattcttcattttgatacgtgtctcagtgttctttccatctctacctcaattttgccgtgtgtgcagtgtgctgtgcacatgcatgctatatgcatgaatcatgatgggttgaccgcagtgatgcagcagccgccgcgcggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttCcccgacgaagtcgccggcgccagcatcgccgccgtccagctgccacgccatcatcaACaCcaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaatctactgattattcaaattagcatagatagataaccctttacaaaatcagggggaaattctgaaattctgcattttaggagtacaacttaatttgtaataatggaaatggttcacgaattttagtataatcagaaaatagatagtatcatcttgtagcaaagatgaatagatagaacagtgcagtgtgtacatttcattatgtcaacttaacagtgcttggattgaaatgtagattaagtaggagaattaattgtttgtactttgtagtagtaagtggctccatcgatccacttgattcttagagacaaagatgcctttgatggcttgatgcctttgaaa
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| CDS seq | atgtcgtcgtcggcgtcggcggcggcgtggTgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgtgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagtgcaattgaagctgcacgtggggaggacaggaaggcattgactgcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgccggcggcgccgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagcgagctgccacggctaccatgttcggacagcaagtgatgcagcagccgccgcgcggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttCcccgacgaagtcgccggcgccagcatcgccgccgtccagctgccacgccatcatcaACaCcaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MSSSASAAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVVRLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDSAIEAARGEDRKALTAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAGGAAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPVTVAPQRAATATMFGQQVMQQPPRGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGASIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN |
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| Function | O-fucosyltransferase 13 [UniProtKB/Swiss-Prot:Q8RY81] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0023310 | OsNaBo_08g0023310.05 | Chr08 | 28406876 | 28411639 | + | NAM | ||
| CDS seq | atgtcgtcgtcggcgtcggcggcggcgtggTgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgtgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagaaatccttcatacgcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaaacaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatgatgattttgagaagatgcatggcaatacaaaagccgctcttgattactatgTttcagtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgtaa
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| Protein seq | MSSSASAAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVVRLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDRNPSYAKASYCQGCYNALRLNKNVETKAIELLQAIPKPFLSLHLRFEPDMVAYSRCVYTGLSSKSLSAIEAARGEDRKALTGEAALLWRNRGKCPLTPSETAFILKALGIPTDTNIYLAAGDGLMELEGFTSIYKNIYTKSSLLTHDDFEKMHGNTKAALDYYVSVSSDAYVATFFGNMDKMVTAMRTMQGHQKTLVLSRRAYANYTAVGLSGEQLAMAMWDAHREEYIMGRGSALPEQCFCEFKL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0023310 | OsNaBo_08g0023310.04 | Chr08 | 28406876 | 28414408 | + | NAM | ||
| CDS seq | atgtcgtcgtcggcgtcggcggcggcgtggTgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgtgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagtgcaattgaagctgcacgtggggaggacaggaaggcattgactgcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgccggcggcgccgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagcgagctgccacggctaccatgttcggacagcaagtgatgcagcagccgccgcgcggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttCcccgacgaagtcgccggcgccagcatcgccgccgtccagctgccacgccatcatcaACaCcaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MSSSASAAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVVRLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDSAIEAARGEDRKALTAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAGGAAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPVTVAPQRAATATMFGQQVMQQPPRGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGASIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0023310 | OsNaBo_08g0023310.03 | Chr08 | 28406876 | 28414408 | + | NAM | ||
| CDS seq | atggatgagaattttactgcgatagagagcaatgctgacgataaagaagaaactgttcttggtgagatgggatttcacagtcagcatggtggctgggctctgtggagggaagctggctctcgtacagaaatgcatcttggcccgccttctgtttctcctgcgtactgttttgacttttcgtgcagctctgcatcgtcagcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgccggcggcgccgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccggtgacggttgcgccgcagcgagctgccacggctaccatgttcggacagcaagtgatgcagcagccgccgcgcggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttCcccgacgaagtcgccggcgccagcatcgccgccgtccagctgccacgccatcatcaACaCcaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MDENFTAIESNADDKEETVLGEMGFHSQHGGWALWREAGSRTEMHLGPPSVSPAYCFDFSCSSASSAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAGGAAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPVTVAPQRAATATMFGQQVMQQPPRGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGASIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0023310 | OsNaBo_08g0023310.02 | Chr08 | 28406876 | 28414573 | + | NAM | ||
| CDS seq | atggatgagaattttactgcgatagagagcaatgctgacgataaagaagaaactgttcttggtgagatgggatttcacagtcagcatggtggctgggctctgtggagggaagctggctctcgtacagaaatgcatcttggcccgccttctgtttctcctgcgtactgttttgacttttcgtgcagctctgcatcgtcagcgatcaagggtaccagggtggatcgcctacgagaagctagtgacacagggcatcatcgtggtcggcacaagagggcccgctcctctcctccacgccatgacgacgagccgccaccgccgccgccgctgtctccggcggtgacaggaggagcacacggcggcgccggcggcgccgcgtggcactcaacggtgctcgcggaggacgtcgaaagtgccgtcatcgtcgcggcgctgacgcacgtcatcagctccacggcggcggaggtgaccacggccgttcctccgcagccgccgcgcggctttcctcctctgccgtcgtcgagcggatcagcagcgacggcgccggagcagcagcagccacggcggcgctaccgcggcgtgcggcagcggccgtgggggaagtgggcggcggagatccgcgacccggtgaaggcggcgcgggtgtggctcggcaccttcgacaccgccgaggacgccgcccgcgcctacgacgccgccgccgtccgcttcaagggctccaaggccaaggtcaacttCcccgacgaagtcgccggcgccagcatcgccgccgtccagctgccacgccatcatcaACaCcaccccccaacgtcactgccgccgctgccggtgccggcgcatctgaggccacacttcagcctcgccggcggccagagcaccacaccggcgcccgcagccgccgccgtcgccgctccgccgcgggaggagttccccgacctcagcagctacgcgcacatactgcagagcggcgacctggagtacgacttccacgccgcggtttctgccggactaacgacgacagctgggcgatcgtcgtcgtcgtcgtcattgtcgatgccgccgccatccgaggatcttgactataagcctccctttggaccatctaattaa
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| Protein seq | MDENFTAIESNADDKEETVLGEMGFHSQHGGWALWREAGSRTEMHLGPPSVSPAYCFDFSCSSASSAIKGTRVDRLREASDTGHHRGRHKRARSSPPRHDDEPPPPPPLSPAVTGGAHGGAGGAAWHSTVLAEDVESAVIVAALTHVISSTAAEVTTAVPPQPPRGFPPLPSSSGSAATAPEQQQPRRRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFPDEVAGASIAAVQLPRHHQHHPPTSLPPLPVPAHLRPHFSLAGGQSTTPAPAAAAVAAPPREEFPDLSSYAHILQSGDLEYDFHAAVSAGLTTTAGRSSSSSSLSMPPPSEDLDYKPPFGPSN
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_08g0023310 | OsNaBo_08g0023310.01 | Chr08 | 28406876 | 28414580 | + | NAM | ||
| CDS seq | atgtcgtcgtcggcgtcggcggcggcgtggTgggcgcgcagccgcgtccgcatcctcctaccggtcatcttcctcgcccccgcgctctacttcctcctctctccaccctcctctccgcctttcttcttcactcttcccacctccagggaggagtcgccgtcggcgtcggggtcgcgggtcatatgggcgcagcggcgggtggcggagtggcggtcgtgcgggtggtggcgggcggcaatgccggctccgtcgaggaggaatgggtacatccggatcgactgctacggcgggctcaaccagctgcgacgcgatctatgtgatggaattgcggttgtgcgccttctcaacgcaacaatggttctgcccaagtttgaggttgctgcctactggaatgaatctagtggatttgcagacgttttcgatgttgattacttcattgagcaaaccagaggttatgtggaagttgtgaaggacatgcctgaagagatagcatcaaaagagccctttaaggttgattgcagcaaacgaaaaggacattttgattacgtggaaacggtgcttccagctctcttggagcatcagtatatttcactgacacctgccatgagccaaagaagagacagaaatccttcatacgcgaaagcttcttactgccaaggctgctacaatgcactgcggttgaataagaatgtggaaacaaaagctattgagcttctccaagccataccaaaacctttcttgtctcttcacctgagatttgaaccagatatggttgcctacagtcgatgtgtatacactggtctgtcttctaaatcactcagtgcaattgaagctgcacgtggggaggacaggaaggcattgactggtgaggctgcccttctgtggaggaaccgtggcaagtgccctctaacaccaagtgaaacagcatttatacttaaagcattaggtatccccacagacacaaacatttatttagctgctggcgatgggctaatggaacttgagggcttcacttccatttacaaaaatatatacactaaatcatccctcctaactcatgatgattttgagaagatgcatggcaatacaaaagccgctcttgattactatgTttcagtcagcagtgatgcttatgttgccaccttctttggaaatatggataagatggtaactgcgatgagaacaatgcaagggcaccagaagactctggtcttgagtaggagggcctatgcaaactacacagctgttggactttcaggggagcaactagctatggccatgtgggatgcccatcgagaggaatatatcatggggaggggatcagcccttcctgagcagtgcttctgtgagttcaaattgtaa
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| Protein seq | MSSSASAAAWWARSRVRILLPVIFLAPALYFLLSPPSSPPFFFTLPTSREESPSASGSRVIWAQRRVAEWRSCGWWRAAMPAPSRRNGYIRIDCYGGLNQLRRDLCDGIAVVRLLNATMVLPKFEVAAYWNESSGFADVFDVDYFIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPALLEHQYISLTPAMSQRRDRNPSYAKASYCQGCYNALRLNKNVETKAIELLQAIPKPFLSLHLRFEPDMVAYSRCVYTGLSSKSLSAIEAARGEDRKALTGEAALLWRNRGKCPLTPSETAFILKALGIPTDTNIYLAAGDGLMELEGFTSIYKNIYTKSSLLTHDDFEKMHGNTKAALDYYVSVSSDAYVATFFGNMDKMVTAMRTMQGHQKTLVLSRRAYANYTAVGLSGEQLAMAMWDAHREEYIMGRGSALPEQCFCEFKL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr08 | 28408312 | 28409561 | + | OsNaBo_08g0023310.05,OsNaBo_08g0023310.03,OsNaBo_08g0023310.02,OsNaBo_08g0023310.01 | OsNaBo_08g0023310.04,OsNaBo_08g0023310.01,OsNaBo_08g0023310.05,OsNaBo_08g0023310.03,OsNaBo_08g0023310.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.268350 | 14.620687 | 2.170882 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0537900 | RBH | 0.364254 | 0.0 | 3.423736 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g42550 | RBH | 0.119929 | 0.0 | 0.599063 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0537900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0023700 | RBH | 0.277844 | 3.163524 | 4.085665 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023510 | RBH | 0.000000 | 1.976102 | 1.636142 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023490 | RBH | 0.638714 | 2.326997 | 6.002275 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0023840 | RBH | 0.051802 | 0.133744 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023400 | RBH | 1.523039 | 7.154530 | 4.324948 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0426500 | RBH | 2.279059 | 22.3833935 | 17.4348345 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023290 | RBH | 0.023462 | 0.493126 | 0.623192 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0446700 | RBH | 2.2416035 | 43.5334605 | 15.899237 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0022690 | RBH | 0.000000 | 0.187176 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023000 | RBH | 0.337112 | 3.482407 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0022820 | RBH | 0.763358 | 29.516428 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0023660 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0022990 | RBH | 0.000000 | 5.692369 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G015120 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0017200 | RBH | 0.0 | 0.0 | 0.0 |
