Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_Ung0045820 OGI:99046720 | 1/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) ChrUN-Ctg345:77838-84352
Gene Symbol MCCB, OsMCCB
DNA seq

AGAGCAAACATTAGTATGCTCATTTTGTAAGCTTTAAGAGAAAAAATATACATTGACGGATTGTGGACTCAGAACAAGTCTATCAATGTATTTTAGCTACAGTAACAACTTAAACAGTTTATTCGCCACTAAAACACTGGTAAACATAACTTTGTTATACACATCAGGGCGAAATTATACTTGCGAAATAAGCCTTGGAAAGGCATTTTATTTTGCCTTATTTCAATGCGCATGAAAGCGGATTTTACTATACAGTATACAGGGATTTGTACACAATTATAATGCATGATTTACATTCGAAATACTCCATATTTTGTGTCTTCTGGAACCGGCTTTGCCGCAGCAGATAAGCAGAGGCTTAAAACCCGTCTGGTGTCCGCAGGATCTATAATCCCATCGTCCCAAAGTCTAGCGGTGGAGTAGTATGGGCTTCCTTCTTTGTCATAAGCCTCCACAACTTTTGCTTTGAAGGCTTCTTCCTCATCTTTGGTCCACTGCGTAAGAGCAAAAGTGATCATTTTGCTGAGCACCTAACGTTGATCGAGTTACAAATAACGAATGCAGTGTAGTTCTCTCAAAAAAAAGAAAGAATGCACTATATACCTCCACTCCTTGTCTTTTTCTGTTGTTCTTCTCTATTTGAGCAAGGACACCGGCTGCCTGAAAAGGTTTAAGGGAGAAAACATTGAGAACTGCAAAAAATATATCACCTAGCTCTGCTTTGACATTTTCACAAGAGGAAAATATGTGCAAATATTTCAACTGAATAGTAATGGCGACATATAGGAAGATGATGTTTACAATGTAGAAGGATGTGATATATGTATCATAAAGCTCCAGGATAAAATCCCCAGCTTTCATCTTTCAATGCACAAATAAAAAAATACTAAAATATTATACTTCCTGTGAATCACCAGAAGAATGGGAAGACCTGTCAACATTTTATTTTCCTTATAAACCAAAATGGACTTAGGCCGGCTTCCACCAGCCCGGCGATCGGTGATATAACCAAAATGGCAAACTTAATTATAATAGTACAAGATTAAAACTAAGCTGGATACCAGTACCAATGTCAACATGACATGGGATGCTAGTGGTAAACTGGTAATCGCCTCATTCCATTTAGGAATACAAAACGAGCTATATCTCAGTGCTACTGTAGCATTTCCATTGTGGTATACACAACAGCTAAACATAAAGCGTCAATGAATAAAAGGGAAGATTAAATAAACACACTTTGAAGAAGACATGGAAAAAAGAGAACTATCCAGGACAGGAAACCATCAAGCTTCCAGTACTTATGCAACAAGTGATTTTTGTACCTTCGCTCATGTTTCCCTCCTGATTTTGTTGGTTTTAGTTTTGTATATATTACCGAATTATTATTTGGACTATTCTTTCACCCAAGTATTCCCTTCAAAGATATAGGCTAAGTTACTGCAATTGGACAGTATGATCTCCATACATTGTTTTAATTTCCAAATAGTTTGCATAATATATATTTTTGAATCTTTATTCAATTGCATACCTGCACTAATTGAATAATAAAGGAGGCTGATCTGGTTTCAATAAATGGCTATGATTTGTGCTTTGATTTTGCAAGTTATACCCCAGAAAAGGTTTCTGACATCGAACATTTGTGCAGAAACTGTTAGTTGACAATGCACTAACGGTTTTTATCACCGTTAGCAACATAAAGGTTTTTCAAATCGAAAAGTCCAAGCACAAATGCACGATGCTAGATAGCAATATCCCATCCTTAAGGTGTAAAATTATTAGCAATAAATGGAATGCCAATAATTACAATCATGAAATTCTTGACTAGGAAATTGTACAAGTAAAAGTTATATGACAAGCTGAATCAACAAAAAGATAAGTTTTAACCTGGATGCCACCCATGACAGATATCCTAGCAGTTGGCCACATAAACAAAAAATTTGGACTGTATGCACGTCCACACATTCCATAGTTTCCAGCACCAAAACTTCCACCAACAATTATGGTAATTTTCGGTACCTGTGTGTAGAGATACAAGATATCTATTACTGCTAAGATTCATTGCTGCAAGTTCTGGTATTTTAAATCCTAAAACCACAAAGGACATTTATGCCAGTAAGGTTATAATTTACTACCTCCATCCCAAAATATAAGAGATTTTGGCAATGCAAATGCATAGCTATATTGGAAAGGTGTTTTTTAAGTGAATCTCATATGTAGAATAAAATAGAAGGGATATGTGTATATTCCACTTTCAAGGGTAATGGGAGCCTGAAACTGGAACTCTGAAAGTACTAAAGCTCAATGTTCAAGTGAATCTTTTTTACTGTCTTATTAAAGTATGAAAGTACAAGAGGCGGCTAGATACTGAATAGAGTGAAAACTACACAAAAAATGAGAGTAATAAGGGAAAAGGTCCCATGAAATTTTTACCTTGGAACAGGAAACTGCCATAACCATTTTTGCTCCCGCTTTTGCAATTCCACTTGCTTCAGATTTTGACCCAACCTATAGTGGACGGGCCATCAAATAACAATTCAAATTATCATTCAAAAGGGCTAAAGAAGTTATTTCAAAATCAAACCAATATGTACATTAAGTTGTAGTGTTCCCAACTACAATGTCAAAACTATGCTGTCCACACAGGTTGCTCTCTTGCAGTCTGCACATTAACCCCCCACACCCTCATTTTATTTTAGAGCAAATTACACTTTGAGCCACCTTTCTTTACCATTGTGTCAATTTGGGCCGGGGATAGAACAATCTTTTCACTTTGGACCACCTAAATTTACATGTTTGTTTCACTTTGGGCCTCTTCTTCCACATCAGCTCCCTCTCTCTCTCTTATCTCAGTTTCTTCTCTCTATCTTGACTGCAAAGGGCTAGAGGAACCACCATGAGCAGGCCAACAAGTGATCACCAGCGTTGTGCTCGTGCCAAAGCTTTGTCGGCATCACCTCCGCACGCTTGGAAAGGAGATCGACCTCCCTAGCTGTTGGGAGGTCAAGCTCCAGCTCGAGGTAGAGTATGGCAAACAGCGGGACTCGAGATAGTGTGGCATCAGCAGAGCTTGAGGATGAAGTGCGGTGTACAATTCAGGGAGGACGGAGAGAAGATCGATGGAGTTGAAGGTGGAAGAAGAGCCCCAAAATGAAACAACATGTAAATATAGGTGGTCCAAAGTGAAAAGGTTACCCTAACCCTAGTCCAAGTTGAAACAATGGTAAAGAAAGGTGGCCCAATTTGCAGGGAGTCTGCCCATTAACTAAAATATTGCCCAGAACCATAAAAATGATCACTGAGCTGGGAAATATTATCCAATGTGTATGGCATGTGGGTATGCAGTGACAATAATGAATCTATTATCTAGTAAAAAAATGTCACAAAGATCACTGAGCTGAGTGTGTACAAAATGTGTATTGAAATGAAGGATTTCAAAAGTAAATAACATAACATACCATGAATCCAGTAATATTTTGAAGGAATATCAAAGGAATATTGCGCTGGGCACACAATTCTATGAAGTGGGAACCCTTTAGGGCTGATTCTGTAAACAAAATGCCATTGTTTCCAATAATTCCAACTGGCTGTCCACAAATCCTTGCAAAACCAGTCACCAGTGTCTGCATAAATGTAAAGTTAAAGAAAACGACTTACACGATGCACAAGATACAGACTACAAGCTTAGTCAAGAATAAGAAAATACTTACTGTTCCATACAATTTTTTGAATTCATCAAATTCACTTCCATCAACTATGCGAGCTATTACTTGGCGAATGTCAAAAGACTGCTTCATATCAGCCGGGGCAATTGAGCGAAGTTCCTGTACATCATACAATGGCTCTTGGTAATCGCAAGCAGAATTTTGTACATTTGGAACTTTAGCTGCCAAGTGGAGGTTCTTCACAATGTTTCTTCCCAATGTTAGCCCATGAAGCTCATCTACATCAATTTTCAGTACAGAATTTGTCTAAAACATTTTAGTAACATTCAGCTTACATGTACAGAAACAAAATGATATACAGAGGGGAGCCTATGGCTTAAAATATGGAGAATCAAAATGCCAATGATGATGTACAAAAGAGAGGAAGTAAAATTGAAATGTTATCTATATAGGAAAGTAATCAAGTCATATTATACTGTGGATGATGTTAAATCTTACCTTGTGCAAAGTGATCAGAGACTCCTGATATCTTACAATGCACTGATGCTCCACCAAGGTCCTCAGCAGATATCTCTTCTCCTGTAGCAGCCTGCAAAATTGGTGTTGTGGACTTCAATATACTATGTTCAGATAGTCTGTAGTATATACTATCATAGTATATCAGTTCTATCGATTAGCCTCGATTAATTGGCCTGATCGACCTTATTGGTGCATAGGCGATTTGAAAACATTGGATAGTTCTCAAGATCTCACCATGCAAAACATAAAATGAATAATCAAAATGGCAGGCAGAGAACACTCACCTTTACAAGTGGTGGACCAGCTAGAAATATTGTTCCATTTCCCTTTACTATTACACTCTCATCAGCCATTGCCGGAATATAAGCACCACCAGCGGTACAAGAGCCTAGAACTAATGCAATCTGAGGAATGCTATCCGATGACATCTTAGCTTGATTGTAGAATATTCGACCAAAATTATCACGGTCAGGGAAAACTTCAGCCTGCCTGGGGAGATTAGCACCTCCACTGTCAACAAGATATATGCAAGGCAGTTTACATTCAGAAGCTATTTCCTGTGCCCGCAGATGCTTTTTGACAGTGATAGGATAGTATGTGCCCCCTTTTGTAGTTGGATCATTGGCCACAAACATACATAATCGTCCATGGACAGGTCCTATGCCAGTTATTATGCCCCCTGATGGTAATGCTTCCTCATAAACACCAGATCCTGCAAGCTTTATTGAAATAAAAAAGGTACCATCAACAGCTGATATTCTAGAACAAGACAGACAACTGTAAGTCTAATGTGGGCCATCTTATCAGATATTGAAACAACTGAATACTTAGGAGTATCCCTACCAAAAAAAAGAAACCTAAGGAGTAAATGGCTGCAGAACCAAAAAAAAAAAAAGCTTGGAAAAACACTAGTGCAGATTTTAGAGTCCAATGCTCATCAAGAGTATCATGTGTTTTCCAGCCTCAATTGTTAGACTCAGGCTTACATCCAATGTCTTCCAAAAATATGCATGTTTTGCATTTAATTTGCTACCACTACCAATCCCTTCAGAACTCATCTGATGCTTCTCAATGTATGAAACAATTGGGAATATTTAAATTAGCACACTGTGACTATTTTTTTCTCCCCGAATTGTCATAAACAGATTATATGCAGAGCAGACAACACTTGTATCCTATGATATATGCATGCAGCACATATCCATTTTGGTTAATACTTTTTTTTATTTGAATGTATCCGAATGTATGTGTAACGCATAAATAGTGATGAAGAGAAAGGAGGCAAGAGCCACACCAATCATGGAAATCCACACTTCAATTGTAATGAAAATGATAAGGTTTTTACAGTCCAATCGCCATCCAGAATGCGTTTGGAACCTTTAAGGGACATTCCAAAAGCAGAGTACTTTTGTAGTTAAACCGGGTATGAAATGCTCATAAAGCTGTAATTGATCAGTGGGCCATGATACCATCTAAGAAAAGCATACAACATATAGTTCAGATGTTCAGTTCATACAATCCCCTGATGCATGGAAATCTCGCTCCCATTTTGAACAAATGAAAATGATTCTGATTTTGCTATTCATTTGTCAAATATAAATACAGTATAATTGCAGTGTAATCACATTGTAACTTGCACAAATGAAAATGATTCTACAATCCAGAATCCACAATATCCCTTAAGCCATAGGGACTTCATACATCATAAAGCTTCCGTTGGTCAATGGGAATGTGATGCTCATTAAGGGGGTGTTTAGATCCATGGGTGTAAAATTTTGGCGTGTCACATCGGATATACGGACACACATTTGAAGTACTAAACGTAGACTAATAACAAAACAAATTACAGATTCCGCCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAACTCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCATGAAGCAATTAGGCTTAAAAGATTCGTCTCGCAATTTATACACAATCTGTGTAATTAGTTATTTTTTTCGTTTATATTTAATACTCTATACATGTGTCCAAATATTCGATGTGACAGGGTGAAAAATTTTGCGATGGATCTAAACATGCCCTAAACAAAGCATACAACATAGAGTCCAGTTCGCACAGTGCCCCTGATGAATGAATGCGAGGAAGGGGAGACAGCGGGTAAGGTACGAGACCGACCTGGGAGAGCTCGAGGAAGGAGGCGCCGGGGTCGAGCAGGCGGTCGATGCGCTCCCGCGGGAGCAGCTTCCCCCGCGCCTTGTTCCGCCTCACCGCCTCCGCGCCTCCCCCGGCCAGCACCTACATATGAAACCAGGAGTGCGCGGCGCCG

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CDS seq

ATGTTTGTGGCCAATGATCCAACTACAAAAGGGGGCACATACTATCCTATCACTGTCAAAAAGCATCTGCGGGCACAGGAAATAGCTTCTGAATGTAAACTGCCTTGCATATATCTTGTTGACAGTGGAGGTGCTAATCTCCCCAGGCAGGCTGAAGTTTTCCCTGACCGTGATAATTTTGGTCGAATATTCTACAATCAAGCTAAGATGTCATCGGATAGCATTCCTCAGATTGCATTAGTTCTAGGCTCTTGTACCGCTGGTGGTGCTTATATTCCGGCAATGGCTGATGAGAGTGTAATAGTAAAGGGAAATGGAACAATATTTCTAGCTGGTCCACCACTTGTAAAGGCTGCTACAGGAGAAGAGATATCTGCTGAGGACCTTGGTGGAGCATCAGTGCATTGTAAGATATCAGGAGTCTCTGATCACTTTGCACAAGATGAGCTTCATGGGCTAACATTGGGAAGAAACATTGTGAAGAACCTCCACTTGGCAGCTAAAGTTCCAAATGTACAAAATTCTGCTTGCGATTACCAAGAGCCATTGTATGATGTACAGGAACTTCGCTCAATTGCCCCGGCTGATATGAAGCAGTCTTTTGACATTCGCCAAGTAATAGCTCGCATAGTTGATGGAAGTGAATTTGATGAATTCAAAAAATTGTATGGAACAACACTGGTGACTGGTTTTGCAAGGATTTGTGGACAGCCAGTTGGAATTATTGGAAACAATGGCATTTTGTTTACAGAATCAGCCCTAAAGGGTTCCCACTTCATAGAATTGTGTGCCCAGCGCAATATTCCTTTGATATTCCTTCAAAATATTACTGGATTCATGGTTGGGTCAAAATCTGAAGCAAGTGGAATTGCAAAAGCGGGAGCAAAAATGGTTATGGCAGTTTCCTGTTCCAAGGTACCGAAAATTACCATAATTGTTGGTGGAAGTTTTGGTGCTGGAAACTATGGAATGTGTGGACGTGCATACAGTCCAAATTTTTTGTTTATGTGGCCAACTGCTAGGATATCTGTCATGGGTGGCATCCAGGCAGCCGGTGTCCTTGCTCAAATAGAGAAGAACAACAGAAAAAGACAAGGAGTGGAGTGGACCAAAGATGAGGAAGAAGCCTTCAAAGCAAAAGTTGTGGAGGCTTATGACAAAGAAGGAAGCCCATACTACTCCACCGCTAGACTTTGGGACGATGGGATTATAGATCCTGCGGACACCAGACGGGTTTTAAGCCTCTGCTTATCTGCTGCGGCAAAGCCGGTTCCAGAAGACACAAAATATGGAGTATTTCGAATGTAA

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Protein seq

MFVANDPTTKGGTYYPITVKKHLRAQEIASECKLPCIYLVDSGGANLPRQAEVFPDRDNFGRIFYNQAKMSSDSIPQIALVLGSCTAGGAYIPAMADESVIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDELHGLTLGRNIVKNLHLAAKVPNVQNSACDYQEPLYDVQELRSIAPADMKQSFDIRQVIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGSHFIELCAQRNIPLIFLQNITGFMVGSKSEASGIAKAGAKMVMAVSCSKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPTARISVMGGIQAAGVLAQIEKNNRKRQGVEWTKDEEEAFKAKVVEAYDKEGSPYYSTARLWDDGIIDPADTRRVLSLCLSAAAKPVPEDTKYGVFRM

Function Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [UniProtKB/Swiss-Prot:Q9LDD8]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0045820 OsLiXu_Ung0045820.01 ChrUN-Ctg345 77838 84352 - NAM
CDS seq

ATGTTTGTGGCCAATGATCCAACTACAAAAGGGGGCACATACTATCCTATCACTGTCAAAAAGCATCTGCGGGCACAGGAAATAGCTTCTGAATGTAAACTGCCTTGCATATATCTTGTTGACAGTGGAGGTGCTAATCTCCCCAGGCAGGCTGAAGTTTTCCCTGACCGTGATAATTTTGGTCGAATATTCTACAATCAAGCTAAGATGTCATCGGATAGCATTCCTCAGATTGCATTAGTTCTAGGCTCTTGTACCGCTGGTGGTGCTTATATTCCGGCAATGGCTGATGAGAGTGTAATAGTAAAGGGAAATGGAACAATATTTCTAGCTGGTCCACCACTTGTAAAGGCTGCTACAGGAGAAGAGATATCTGCTGAGGACCTTGGTGGAGCATCAGTGCATTGTAAGATATCAGGAGTCTCTGATCACTTTGCACAAGATGAGCTTCATGGGCTAACATTGGGAAGAAACATTGTGAAGAACCTCCACTTGGCAGCTAAAGTTCCAAATGTACAAAATTCTGCTTGCGATTACCAAGAGCCATTGTATGATGTACAGGAACTTCGCTCAATTGCCCCGGCTGATATGAAGCAGTCTTTTGACATTCGCCAAGTAATAGCTCGCATAGTTGATGGAAGTGAATTTGATGAATTCAAAAAATTGTATGGAACAACACTGGTGACTGGTTTTGCAAGGATTTGTGGACAGCCAGTTGGAATTATTGGAAACAATGGCATTTTGTTTACAGAATCAGCCCTAAAGGGTTCCCACTTCATAGAATTGTGTGCCCAGCGCAATATTCCTTTGATATTCCTTCAAAATATTACTGGATTCATGGTTGGGTCAAAATCTGAAGCAAGTGGAATTGCAAAAGCGGGAGCAAAAATGGTTATGGCAGTTTCCTGTTCCAAGGTACCGAAAATTACCATAATTGTTGGTGGAAGTTTTGGTGCTGGAAACTATGGAATGTGTGGACGTGCATACAGTCCAAATTTTTTGTTTATGTGGCCAACTGCTAGGATATCTGTCATGGGTGGCATCCAGGCAGCCGGTGTCCTTGCTCAAATAGAGAAGAACAACAGAAAAAGACAAGGAGTGGAGTGGACCAAAGATGAGGAAGAAGCCTTCAAAGCAAAAGTTGTGGAGGCTTATGACAAAGAAGGAAGCCCATACTACTCCACCGCTAGACTTTGGGACGATGGGATTATAGATCCTGCGGACACCAGACGGGTTTTAAGCCTCTGCTTATCTGCTGCGGCAAAGCCGGTTCCAGAAGACACAAAATATGGAGTATTTCGAATGTAA

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Protein seq

MFVANDPTTKGGTYYPITVKKHLRAQEIASECKLPCIYLVDSGGANLPRQAEVFPDRDNFGRIFYNQAKMSSDSIPQIALVLGSCTAGGAYIPAMADESVIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDELHGLTLGRNIVKNLHLAAKVPNVQNSACDYQEPLYDVQELRSIAPADMKQSFDIRQVIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGSHFIELCAQRNIPLIFLQNITGFMVGSKSEASGIAKAGAKMVMAVSCSKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPTARISVMGGIQAAGVLAQIEKNNRKRQGVEWTKDEEEAFKAKVVEAYDKEGSPYYSTARLWDDGIIDPADTRRVLSLCLSAAAKPVPEDTKYGVFRM

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.650939 0.0 0.313979

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0424200 SBH 5.599121 5.758329 11.915483
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g32850 SBH 2.198614 3.156123 1.731932
Nipponbare | IRGSP 1.0 | RAP-db Os08g0424200 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_08g0016520 SBH 1.465895 34.565403 3.236993
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0016390 SBH 0.979794 6.885181 3.771009
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0016330 SBH 3.669839 33.483734 16.392643
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0016680 SBH 0.508674 0.752805 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0016510 SBH 16.969810 7.629673 17.414850
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0325100 SBH 15.522965 28.9515425 22.9550105
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0016410 SBH 0.614931 2.061765 0.836944
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0346700 SBH 17.3472405 101.8862535 13.8734455
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0015780 SBH 0.483249 0.099029 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0016060 SBH 1.460730 16.355871 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0015850 SBH 10.298491 27.440651 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0016670 RBH 1.469485 1.069335 0.546680
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0016070 SBH 0.949019 14.698301 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G016190 SBH 1.614512 4.177353 3.179088
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0016310 SBH 2.314496 26.830442 12.105600
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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