Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_08G016190 | OGI:08060100 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr08:21434898-21441807 | ||||||||
| Gene Symbol | MCCB, OsMCCB | ||||||||||
| DNA seq | GATGAGAGCAAACATTAGTATGCTCATTTTGTAAGCTTTAAGAGAGAAAATATACATTGACGGATTGTGGACTCAGAACAATAGTCTATCAATGTATTTTAGCTACAGTAACAACTTAAACAGTTTATTCGCCACTAAAACACTGGTAAACATAACTTTGTTATACACGTCAGGGCGAAATTATACTTGCGAAATAAGCCTTGGAAAGGCATTTTATTTTGCCTTATTTCAATGCGCATGAAAGCGGATTTTACTATACAGTATACAGGGATTTGTACACAATTATAATGCATGATTTACATTCGAAATACTCCATATTTTGTGTCTTCTGGAACCGGCTTTGCCGCAGCAGATAAGCAGAGGCTTAAAACCCGTCTGGTGTCCGCAGGATCTATAATCCCATCGTCCCAAAGTCTAGCGGTGGAGTAGTATGGGCTTCCTTCTTTGTCATAAGCCTCCACAACTTTTGCTTTGAAGGCTTCTTCCTCATCTTTGGTCCACTGCGTAAGAGCAAAAGTGATCATTTTGCTGAGCACCTAACGTTGATCGAGTTACAAATAACGAATGCAGTGTAGTTCTCTCAAAAAAAAGAAAGAATGCACTATATACCTCCACTCCTTGTCTTTTTCTGTTGTTCTTCTCTATTTGAGCAAGGACACCGGCTGCCTGAAAAGGTTTAAGGGAGCAAACATTGAGAACTGCAAAAAATATATCACCTAGCTCTGCTTTGACATTTTCACAAGAGGAAAATATGTGCAAATATTTCAACTGAATAGTAATGGAGACATATAGGAAGATGATGTTTACAATGTAGAAGGATGTGATATATGTATCATAAAGCTCCAGGATAAAATCCCCGGCTTTCATCTTTCAATGCACAAATAAAAAAATACTAAAATATTATACTTCCTGTGAATCACCAGAAGAATGGGAAGACCTGTCAACATTTTATTTTCCTTATAAACCAAAATGGACTTAGGCCGGCTTCCACCAGCCCGGCGATCGGTGATATAACCAAAATGGCAAACTTAATTATAATAGTACAAGATTAAAACTAAGCTGGATACCAGTACCAATGTCAACATGACATGGGATGCTAGTGGTAAACTGGTAATCGCCTCCTTCCATTTAGGAATACAAAACGAGCTATATCTCAGTGCTACTGTAGCATTTCCATTGTGGTATACACAACAGCTAAACATAAAGCGTCAATGAATAAAAGGGAAGATTAAATAAACACACTTTGAAGAAGACATGGAAAAAAGAGAACTATCCAGGACAGGAAACCATCAAGCTTCCAGTACTTATGCAACAAGTGATTTTTGTACCTTCGCTCATGTTTCCCTCCTGATTTTGTTGGTTTTAGTTTTGTATATATTACCGAATTATTATTTGGACTATTCTTTCACCCAAGTATTCCCTTCAAAGATATAGGCTAAGTTACTGCAATTGGACAGTATGATCTCCATACATTGTTTTAATTTCCAAATAGTTTGCATAATATATATTTTTGAATCTTTATTCAATTGCATACCTGCACTAATTGAATAATAAAGGAGGCTGATCTGGTTTCAATAAATGGCTATGATTTGTGCTTTGATTTTGCAAGTTATACCCCAGAAAAGGTTTCTGACATCGAACATTTGTGCAGAAACTGTTAGTTGACAATGCACTAACGGTTTTTATCACCGGTTAGCAACATAAAGGTTTTTCAAATCGAAAAGTCCAAGCACAAATGCACGATGCTAGATAGCAATATCCCATCCTTAAGGTGTAAAATTATTAGCAATAAATGGAATGCCAATAATTACAATCATGAAATTCTTGACTAGGAAATTGTACAAGTAAAAGTTATATGACAAGCTGAATCAACAAAAAGATAAGTTTTTACCTGGATGCCACCCATGACAGATATCCTAGCAGTTGGCCACATAAACAAAAAATTTGGACTGTATGCACGTCCACACATTCCATAGTTTCCAGCACCAAAACTTCCACCAACAATTATGGTAATTTTCGGTACCTGTGTGTAGAGATACAAGATATCTATTACTGCTAAGATTCATTGCTGCAAGTTCTGGTATTTTAAATCCTAAAACCACAAAGGACATTTATGCCAGTAAGGTTATAATTTACTACCTCCGTCCCAAAATATAAGAGATTTTGGCAATGCAAATGCATAGCTATATTGGAAAGGTGTTTTTTAAGTGAATCTCATATTTAGAATAAAATAGAAGGGATATGTGTATATTCCACTTTCAAGGGTAATGGGAGCCTGAAACTGGAACTCTGAAAGTACTAAAGCTCAATGTTCAAGTGAATCTTTTTTACTGTCTTATTAAAGTATGAAAGTACAAGAGGCGGCTAGATACTGAATAGAGTGAAAACTACACAAAAAATGAGAGTAATAAGGGAAAAGGTCCCATGAAATTTTTACCTTGGAACAGGAAACTGCCATAACCATTTTTGCTCCCGCTTTTGCAATTCCACTTGCTTCAGATTTTGACCCAACCTATAGTGGACGGGCCATCAAATAACAATTCAAATTATCATTCAAAAGGGCTAAAGAAGTTATTTCAAAATCAAACCAATATGTACGTTAAGTTGTAGTGTTCCCAACTACAATGTCAAAACTATGCTGTCCACACAGGTTGCTCTCTTGCAGTCTGCACATTAACCCCCCACACCCTCATTTTATTTTAGAGCAAATTACACTTTGAGCCACCTTTCTTTACCATTGTGTCAATTTGGGCCAGGGATAGAACAATCTTTTCACTTTGGACCACCTAAATTTACATGTTTGTTTCATTTTGGGCCTCTTCTTCCACATCAGCTCCCTCTCTCTCTCTTATCTCAGTTTCTTCTCTCTATCTTGACTGCAAAGGGCTAGAGGAACCACCATGAGCAGGCCAACAAGTGATCACCAGCGTTGTGCTCGTGCCAAAGCTTTGTCGGCATCACCTCCGCACGCTTGGAAAGGAGATCGACCTCCCTAGCTGTTGGGAGGTCAAGCTCCAGCTCGAGGTAGAGTATGGCAAACAGCGGGACTCGAGATAGTGTGGCATCAGCAGAGCTTGAGGATGAAGTGCGGTGTACAATTCAGGGAGGGCGGAGAGAAGATCGATGGAGTTGAAGGTGGAAGAAGAGCCCCAAAATGATACAACATGTAAATATAGGTGGTCCAAAGTGAAAAGGTTACCCTAACCCTAGTCCAAGTTGAAACAATGGTAAAGAAAGGTGGCCCAATTTGCAGGGAGTCTGCCCATTAACTAAAATATTGCCCAGAACCATAAAAATGATCACTGAGCTGGGAAATATTATCCAATGTGTATGGCATGTGGGTATGCAGTGACAATAATGAATCTATTATCTAGTAAAAAAATGTCACAAAGATCACTGAGCTGAGTGTGTACAAAATGTGTATTGAAATGAAGGATTTCAAAAGTAAATAACATAACATACCATGAATCCAGTAATATTTTGAAGGAATATCAAAGGAATATTGCGCTGGGCACACAATTCTATGAAGTGGGAACCCTTTAGGGCTGATTCTGTAAACAAAATGCCATTGTTTCCAATAATTCCAACTGGCTGTCCACAAATCCTTGCAAAACCAGTCACCAGTGTCTGCATAAATGTAAAGTTAAAGAAAACGACTTACACGATGCACAAGATACAGACTACAAGCTTAGTCAAGAATAAGAAAATACTTACTGTTCCATACAATTTTTTGAATTCATCAAATTCACTTCCATCAACTATGCGAGCTATTACTTGGCGAATGTCAAAAGACTGCTTCATATCAGCCGGGGCAATTGAGCGAAGTTCCTGTACATCATACAATGGCTCTTGGTAATCGCAAGCAGAATTTTGTACATTTGGAACTTTAGCTGCCAAGTGGAGGTTCTTCACAATGTTTCTTCCCAATGTTAGCCCATGAAGCTCATCTACATCAATTTTCAGTACAGAATTTGTCTAAAACATTTTAGTAACATTCAGCTTACATGTACAGAAACAAAATGATATACAGAGGGGAGCCTATGGCTTAAAATATGGAGAATCAAAATGCCAATGATGATGTACAAAAGAGAGGAAGTAAAATTGAAATGTTATCTATATAGGAAAGTAATCAAGTCATATTATACTGTGGATGATGTTAAATCTTACCTTGTGCAAAGTGATCAGAGACTCCTGATATCTTACAATGCACTGATGCTCCACCAAGGTCCTCAGCAGATATCTCTTCTCCTGTAGCAGCCTGCAAAATTGGTGTTGTGGACTTCAATATACTATGTTCAGATAGTCTGTAGTATATACTATCATAGTATATCAGTTCTATCGATTAGCCTCGATTAATTGGCCTGATCGACCTTATTGGTGCATAGGCGATTTGAAAACATTGGATAGTTCTCAAGATCTCACCATGCAAAACATAAAATGAATAATCAAAATGGCAGGCAGAGAACACTCACCTTTACAAGTGGTGGACCAGCTAGAAATATTGTTCCATTTCCCTTTACTATTACACTCTCATCAGCCATTGCCGGAATATAAGCACCACCAGCGGTACAAGAGCCTAGAACTAATGCAATCTGAGGAATGCTATCCGATGACATCTTAGCTTGATTGTAGAATATTCGACCAAAATTATCACGGTCAGGGAAAACTTCAGCCTGCCTGGGGAGATTAGCACCTCCACTGTCAACAAGATATATGCAAGGCAGTTTACATTCAGAAGCTATTTCCTGTGCCCGCAGATGCTTTTTGACAGTGATAGGATAGTATGTGCCCCCTTTTGTAGTTGGATCATTGGCCACAAACATACATAATCGTCCATGGACAGGTCCTATGCCAGTTATTATGCCCCCTGATGGTAATGCTTCCTCATAAACACCAGATCCTGCAAGCTTTATTGAAATAAAAAAGGTACCATCAACAGCTGATATTCTAGAACAAGACAGACAACTGTAAGTCTAATGTGGGCCATCTTATCAGATATTGAAACAACTGAATACTTAGGAGTATCCCTACCAAAAAAAAGAAACCTAAGGAGTAAATGGCTGCAGAACCAAAAAAAAAAAAGCTTGGAAAAACACTAGTGCAGATTTTAGAGTCCAATGCTCATCAAGAGTATCATGTGTTTTCCAGCCTCAATTGTTAGACTCAGGCTTACATCCAATGTCTTCCAAAAATATGCATGTTTTGCATTTAATTTGCTACCACTACCAATCCCTTCAGAACTCATCTGATGCTTCTCAATGTATGAAACAATTGGGAATATTTAAATTAGCACACTGTGACTATTTTTTTTCTCCCCGAATTGTCATAAACAGATTATATGCAGAGCAGACAACACTTGTATCCTATGATATATGCATGCAGCACATATCCATTTTGGTTAATACTTTTTTTTATTTGAATGTATCCGAATGTATGTGTAACGCATAAATAGTGATGAAGAGAAAGGAGGCAAGAGCCACACCAATCATGGAAATCCACACTACAATTGTAATGAAAATGATAAGGTTTTTACAGTCCAATCGCCATCCAGAATGCGTTTGGAACCTTTAAGGGACATTCCAAAAGCAGAGTACTTTTGTAGTTAAACCGGGTATGAAATGCTCATAAAGCTGTAATTGATCAGTGGGCCGTGATACCATCTAAGAAAAGCATACAACATATAGTTCAGATGTTCAGTTCATACAATCCCCTGATGCATGGAAATCTCGCTCCCATTTTGAACAAATGAAAATGATTCTGATTTTGCTATTCATTTGTCAAATATAAATACAGTATAATTGCAGTGTAATCACATTGTAACTTGCACAAATGAAAATGATTCTACAATCCAGAATCCACAATATCCCTTAAGCCATAGGGACTTCATACATCATAAAGCTTCCGTTGGTCAATGGGAATGTGATGCTCATTAAGGGGGTGTTTAGATCCATGGGTGTAAAATTTTGGCGTGTCACATCGGATATACGGACACACATTTGAAGTACTAAACGTAGACTAATAATAAAACAAATTACAGATTCCGCCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAACTCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCATGAAGCAATTAGGCTTAAAAGATTCGTCTCGCAATTTATACACAATCTGTGTAATTAGTTATTTTTTTCGTTTATATTTAATACTCTATACATGTGTCCAAATATTCGATGTGACAGGGTGAAAAATTTTGCGATGGATCTAAACATGCCCTAAACAAAGCATACAACATAGAGTCCAGTTCGCACAGTGCCCCTGATGAATGAATGCGAGGAAGGGGAGACAGCGGGTAAGGTACGAGACCGACCTGGGAGAGCTCGAGGAAGGAGGCGCCGGGGTCGAGCAGGCGGTCGATGCGCTCCCGCGGGAGCAGCTTCCCCCGCGCCTTGTTCCGCCTCACCGCCTCCGCGCCTCCCCCGGCCAGCACCTACATATGAAACCAGGAGTGCGCGGCGCCGCCACTCCAATCCAGTGAGAGACGAGAAGCGAGGAGCAAACGAGAGGGGATGGCCGGCCCGGCGGGCGCGCGCGCACCTGGGAGACGCGGGCGCGGAGGTCGGAGAGGAGGCCGCCCACCGCGGCGGCGTTGCGGGCGTGCGCGTCGGAGGCCCGGTCGAGGCCGTCGGGGAGCACCGAGGCGCCGCCCCCGTGGGCGTACGCCGCGGCCGCCGCAGCGGCCGACGAGGGGTACCCCGCGGTCGCCGGCGGCCGGAGACGCCGCGCGGCGAACCGGCGGAGCATGTCGGAGTCACTCCTCCTACGGCGGCGGGGGCGGGGCTCGTCGGAGTAGAGGAGTGTACGGACGGACTTGCTTTGGGTGGGTGTGCCTGTGACCAGAGACTGTGA
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| CDS seq | ATGCTCCGCCGGTTCGCCGCGCGGCGTCTCCGGCCGCCGGCGACCGCGGGGTACCCCTCGTCGGCCGCTGCGGCGGCCGCGGCGTACGCCCACGGGGGCGGCGCCTCGGTGCTCCCCGACGGCCTCGACCGGGCCTCCGACGCGCACGCCCGCAACGCCGCCGCGGTGGGCGGCCTCCTCTCCGACCTCCGCGCCCGCGTCTCCCAGGTGCTGGCCGGGGGAGGCGCGGAGGCGGTGAGGCGGAACAAGGCGCGGGGGAAGCTGCTCCCGCGGGAGCGCATCGACCGCCTGCTCGACCCCGGCGCCTCCTTCCTCGAGCTCTCCCAGCTTGCAGGATCTGGTGTTTATGAGGAAGCATTACCATCAGGGGGCATAATAACTGGCATAGGACCTGTCCATGGACGATTATGTATGTTTGTGGCCAATGATCCAACTACAAAAGGGGGCACATACTATCCTATCACTGTCAAAAAGCATCTGCGGGCACAGGAAATAGCTTCTGAATGTAAACTGCCTTGCATATATCTTGTTGACAGTGGAGGTGCTAATCTCCCCAGGCAGGCTGAAGTTTTCCCTGACCGTGATAATTTTGGTCGAATATTCTACAATCAAGCTAAGATGTCATCGGATAGCATTCCTCAGATTGCATTAGTTCTAGGCTCTTGTACCGCTGGTGGTGCTTATATTCCGGCAATGGCTGATGAGAGTGTAATAGTAAAGGGAAATGGAACAATATTTCTAGCTGGTCCACCACTTGTAAAGGCTGCTACAGGAGAAGAGATATCTGCTGAGGACCTTGGTGGAGCATCAGTGCATTGTAAGATATCAGGAGTCTCTGATCACTTTGCACAAGATGAGCTTCATGGGCTAACATTGGGAAGAAACATTGTGAAGAACCTCCACTTGGCAGCTAAAGTTCCAAATGTACAAAATTCTGCTTGCGATTACCAAGAGCCATTGTATGATGTACAGGAACTTCGCTCAATTGCCCCGGCTGATATGAAGCAGTCTTTTGACATTCGCCAAGTAATAGCTCGCATAGTTGATGGAAGTGAATTTGATGAATTCAAAAAATTGTATGGAACAACACTGGTGACTGGTTTTGCAAGGATTTGTGGACAGCCAGTTGGAATTATTGGAAACAATGGCATTTTGTTTACAGAATCAGCCCTAAAGGGTTCCCACTTCATAGAATTGTGTGCCCAGCGCAATATTCCTTTGATATTCCTTCAAAATATTACTGGATTCATGGTTGGGTCAAAATCTGAAGCAAGTGGAATTGCAAAAGCGGGAGCAAAAATGGTTATGGCAGTTTCCTGTTCCAAGGTACCGAAAATTACCATAATTGTTGGTGGAAGTTTTGGTGCTGGAAACTATGGAATGTGTGGACGTGCATACAGTCCAAATTTTTTGTTTATGTGGCCAACTGCTAGGATATCTGTCATGGGTGGCATCCAGGCAGCCGGTGTCCTTGCTCAAATAGAGAAGAACAACAGAAAAAGACAAGGAGTGGAGTGGACCAAAGATGAGGAAGAAGCCTTCAAAGCAAAAGTTGTGGAGGCTTATGACAAAGAAGGAAGCCCATACTACTCCACCGCTAGACTTTGGGACGATGGGATTATAGATCCTGCGGACACCAGACGGGTTTTAAGCCTCTGCTTATCTGCTGCGGCAAAGCCGGTTCCAGAAGACACAAAATATGGAGTATTTCGAATGTAA
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| Protein seq | MLRRFAARRLRPPATAGYPSSAAAAAAAYAHGGGASVLPDGLDRASDAHARNAAAVGGLLSDLRARVSQVLAGGGAEAVRRNKARGKLLPRERIDRLLDPGASFLELSQLAGSGVYEEALPSGGIITGIGPVHGRLCMFVANDPTTKGGTYYPITVKKHLRAQEIASECKLPCIYLVDSGGANLPRQAEVFPDRDNFGRIFYNQAKMSSDSIPQIALVLGSCTAGGAYIPAMADESVIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDELHGLTLGRNIVKNLHLAAKVPNVQNSACDYQEPLYDVQELRSIAPADMKQSFDIRQVIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGSHFIELCAQRNIPLIFLQNITGFMVGSKSEASGIAKAGAKMVMAVSCSKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPTARISVMGGIQAAGVLAQIEKNNRKRQGVEWTKDEEEAFKAKVVEAYDKEGSPYYSTARLWDDGIIDPADTRRVLSLCLSAAAKPVPEDTKYGVFRM |
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| Function | Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [UniProtKB/Swiss-Prot:Q9LDD8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G016190 | OsN22_08G016190_02 | Chr08 | 21434898 | 21441419 | - | NAM | ||
| CDS seq | ATGTTTGTGGCCAATGATCCAACTACAAAAGGGGGCACATACTATCCTATCACTGTCAAAAAGCATCTGCGGGCACAGGAAATAGCTTCTGAATGTAAACTGCCTTGCATATATCTTGTTGACAGTGGAGGTGCTAATCTCCCCAGGCAGGCTGAAGTTTTCCCTGACCGTGATAATTTTGGTCGAATATTCTACAATCAAGCTAAGATGTCATCGGATAGCATTCCTCAGATTGCATTAGTTCTAGGCTCTTGTACCGCTGGTGGTGCTTATATTCCGGCAATGGCTGATGAGAGTGTAATAGTAAAGGGAAATGGAACAATATTTCTAGCTGGTCCACCACTTGTAAAGGCTGCTACAGGAGAAGAGATATCTGCTGAGGACCTTGGTGGAGCATCAGTGCATTGTAAGATATCAGGAGTCTCTGATCACTTTGCACAAGATGAGCTTCATGGGCTAACATTGGGAAGAAACATTGTGAAGAACCTCCACTTGGCAGCTAAAGTTCCAAATGTACAAAATTCTGCTTGCGATTACCAAGAGCCATTGTATGATGTACAGGAACTTCGCTCAATTGCCCCGGCTGATATGAAGCAGTCTTTTGACATTCGCCAAGTAATAGCTCGCATAGTTGATGGAAGTGAATTTGATGAATTCAAAAAATTGTATGGAACAACACTGGTGACTGGTTTTGCAAGGATTTGTGGACAGCCAGTTGGAATTATTGGAAACAATGGCATTTTGTTTACAGAATCAGCCCTAAAGGGTTCCCACTTCATAGAATTGTGTGCCCAGCGCAATATTCCTTTGATATTCCTTCAAAATATTACTGGATTCATGGTTGGGTCAAAATCTGAAGCAAGTGGAATTGCAAAAGCGGGAGCAAAAATGGTTATGGCAGTTTCCTGTTCCAAGGTACCGAAAATTACCATAATTGTTGGTGGAAGTTTTGGTGCTGGAAACTATGGAATGTGTGGACGTGCATACAGTCCAAATTTTTTGTTTATGTGGCCAACTGCTAGGATATCTGTCATGGGTGGCATCCAGGCAGCCGGTGTCCTTGCTCAAATAGAGAAGAACAACAGAAAAAGACAAGGAGTGGAGTGGACCAAAGATGAGGAAGAAGCCTTCAAAGCAAAAGTTGTGGAGGCTTATGACAAAGAAGGAAGCCCATACTACTCCACCGCTAGACTTTGGGACGATGGGATTATAGATCCTGCGGACACCAGACGGGTTTTAAGCCTCTGCTTATCTGCTGCGGCAAAGCCGGTTCCAGAAGACACAAAATATGGAGTATTTCGAATGTAA
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| Protein seq | MFVANDPTTKGGTYYPITVKKHLRAQEIASECKLPCIYLVDSGGANLPRQAEVFPDRDNFGRIFYNQAKMSSDSIPQIALVLGSCTAGGAYIPAMADESVIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDELHGLTLGRNIVKNLHLAAKVPNVQNSACDYQEPLYDVQELRSIAPADMKQSFDIRQVIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGSHFIELCAQRNIPLIFLQNITGFMVGSKSEASGIAKAGAKMVMAVSCSKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPTARISVMGGIQAAGVLAQIEKNNRKRQGVEWTKDEEEAFKAKVVEAYDKEGSPYYSTARLWDDGIIDPADTRRVLSLCLSAAAKPVPEDTKYGVFRM
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G016190 | OsN22_08G016190_01 | Chr08 | 21434898 | 21441807 | - | NAM | ||
| CDS seq | ATGCTCCGCCGGTTCGCCGCGCGGCGTCTCCGGCCGCCGGCGACCGCGGGGTACCCCTCGTCGGCCGCTGCGGCGGCCGCGGCGTACGCCCACGGGGGCGGCGCCTCGGTGCTCCCCGACGGCCTCGACCGGGCCTCCGACGCGCACGCCCGCAACGCCGCCGCGGTGGGCGGCCTCCTCTCCGACCTCCGCGCCCGCGTCTCCCAGGTGCTGGCCGGGGGAGGCGCGGAGGCGGTGAGGCGGAACAAGGCGCGGGGGAAGCTGCTCCCGCGGGAGCGCATCGACCGCCTGCTCGACCCCGGCGCCTCCTTCCTCGAGCTCTCCCAGCTTGCAGGATCTGGTGTTTATGAGGAAGCATTACCATCAGGGGGCATAATAACTGGCATAGGACCTGTCCATGGACGATTATGTATGTTTGTGGCCAATGATCCAACTACAAAAGGGGGCACATACTATCCTATCACTGTCAAAAAGCATCTGCGGGCACAGGAAATAGCTTCTGAATGTAAACTGCCTTGCATATATCTTGTTGACAGTGGAGGTGCTAATCTCCCCAGGCAGGCTGAAGTTTTCCCTGACCGTGATAATTTTGGTCGAATATTCTACAATCAAGCTAAGATGTCATCGGATAGCATTCCTCAGATTGCATTAGTTCTAGGCTCTTGTACCGCTGGTGGTGCTTATATTCCGGCAATGGCTGATGAGAGTGTAATAGTAAAGGGAAATGGAACAATATTTCTAGCTGGTCCACCACTTGTAAAGGCTGCTACAGGAGAAGAGATATCTGCTGAGGACCTTGGTGGAGCATCAGTGCATTGTAAGATATCAGGAGTCTCTGATCACTTTGCACAAGATGAGCTTCATGGGCTAACATTGGGAAGAAACATTGTGAAGAACCTCCACTTGGCAGCTAAAGTTCCAAATGTACAAAATTCTGCTTGCGATTACCAAGAGCCATTGTATGATGTACAGGAACTTCGCTCAATTGCCCCGGCTGATATGAAGCAGTCTTTTGACATTCGCCAAGTAATAGCTCGCATAGTTGATGGAAGTGAATTTGATGAATTCAAAAAATTGTATGGAACAACACTGGTGACTGGTTTTGCAAGGATTTGTGGACAGCCAGTTGGAATTATTGGAAACAATGGCATTTTGTTTACAGAATCAGCCCTAAAGGGTTCCCACTTCATAGAATTGTGTGCCCAGCGCAATATTCCTTTGATATTCCTTCAAAATATTACTGGATTCATGGTTGGGTCAAAATCTGAAGCAAGTGGAATTGCAAAAGCGGGAGCAAAAATGGTTATGGCAGTTTCCTGTTCCAAGGTACCGAAAATTACCATAATTGTTGGTGGAAGTTTTGGTGCTGGAAACTATGGAATGTGTGGACGTGCATACAGTCCAAATTTTTTGTTTATGTGGCCAACTGCTAGGATATCTGTCATGGGTGGCATCCAGGCAGCCGGTGTCCTTGCTCAAATAGAGAAGAACAACAGAAAAAGACAAGGAGTGGAGTGGACCAAAGATGAGGAAGAAGCCTTCAAAGCAAAAGTTGTGGAGGCTTATGACAAAGAAGGAAGCCCATACTACTCCACCGCTAGACTTTGGGACGATGGGATTATAGATCCTGCGGACACCAGACGGGTTTTAAGCCTCTGCTTATCTGCTGCGGCAAAGCCGGTTCCAGAAGACACAAAATATGGAGTATTTCGAATGTAA
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| Protein seq | MLRRFAARRLRPPATAGYPSSAAAAAAAYAHGGGASVLPDGLDRASDAHARNAAAVGGLLSDLRARVSQVLAGGGAEAVRRNKARGKLLPRERIDRLLDPGASFLELSQLAGSGVYEEALPSGGIITGIGPVHGRLCMFVANDPTTKGGTYYPITVKKHLRAQEIASECKLPCIYLVDSGGANLPRQAEVFPDRDNFGRIFYNQAKMSSDSIPQIALVLGSCTAGGAYIPAMADESVIVKGNGTIFLAGPPLVKAATGEEISAEDLGGASVHCKISGVSDHFAQDELHGLTLGRNIVKNLHLAAKVPNVQNSACDYQEPLYDVQELRSIAPADMKQSFDIRQVIARIVDGSEFDEFKKLYGTTLVTGFARICGQPVGIIGNNGILFTESALKGSHFIELCAQRNIPLIFLQNITGFMVGSKSEASGIAKAGAKMVMAVSCSKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPTARISVMGGIQAAGVLAQIEKNNRKRQGVEWTKDEEEAFKAKVVEAYDKEGSPYYSTARLWDDGIIDPADTRRVLSLCLSAAAKPVPEDTKYGVFRM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.614512 | 4.177353 | 3.179088 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0424200 | RBH | 5.599121 | 5.758329 | 11.915483 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g32850 | RBH | 2.198614 | 3.156123 | 1.731932 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0424200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0016520 | RBH | 1.465895 | 34.565403 | 3.236993 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0016390 | RBH | 0.979794 | 6.885181 | 3.771009 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0016330 | RBH | 3.669839 | 33.483734 | 16.392643 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0016680 | RBH | 0.508674 | 0.752805 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0016510 | RBH | 16.969810 | 7.629673 | 17.414850 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0325100 | RBH | 15.522965 | 28.9515425 | 22.9550105 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0016410 | RBH | 0.614931 | 2.061765 | 0.836944 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0346700 | RBH | 17.3472405 | 101.8862535 | 13.8734455 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0015780 | RBH | 0.483249 | 0.099029 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0016060 | RBH | 1.460730 | 16.355871 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0015850 | RBH | 10.298491 | 27.440651 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0016670 | RBH | 1.469485 | 1.069335 | 0.546680 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0016070 | RBH | 0.949019 | 14.698301 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0016310 | RBH | 2.314496 | 26.830442 | 12.105600 |
