Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_Ung0042970 OGI:99044600 | 1/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) ChrUN-Ctg316:201435-210800
Gene Symbol -
DNA seq

tcataacttaagcaaattatgaacctttttccgttggtgaaataatgagtcagctttcctcacaaccataccacattcatgacatacatgacccaaatcttcataaacatgaatatcatggttgtaattgttcaactgttttttattattcacttccgatgtgtcgagctgtccaaaacatataattagaataaaaaaattaacaatgattggcttcaaaagcatgtattttgtggtttcaacttgtacctgtgtgctctccacagccacatagaaagcaccccaacgatccttaagacaatctgctgctggatctacctctcctttttgttttctctccctagggatggccatagtgctatcactgaaatgaaagtcctggtcagatttctgatgtttttcttccatcttctccatgttgccactggcctacagtaagcaaaagtgagtaattgtttgaatagctggaagtaaaatagatttaagaaagagtaaattgtgtcgtgggtattggcaagggggtgcacctagttacaactcaaaagttattaagcccatgggttgaaaaaattgacaggtgggtacatttgtgtacaactagagatatttcaaaatttcagaaattttagactattttgaccgttgaacaaactttagctgaatttgataaatttgctaaattaaacaaaattgatttttttggggctaaataattccgtatcaagaaggggataaaataacccaaaaggttgtgtccaaaatattgaaccctgttcatatgcaaagttgaatattccatgtaagaattgcaagtgaaaggcacgtaccaaaattattgtttctctttcttctgctttctccacggaacaattgcaaattcttcctgaacttctgtagtgttgtatccccatcgacaaatcttgttttgaacagaaactgcaatatgtatggaactctaattgatttcagcgcttaattgaaatagatagccctgtctatatctctactacttataaaaaataaaaaataagaggtgtttctatcgtccgtaaaaaaaccagcgaaaaaaaatcaggcaagcaaaaaaaaaccaggtgaaaaagggaaaaaaaccaaatttgtcagataaaaaaccgcgcaaaaaaatccgattccatgttaaaaaagggcgaaaaaaataataataaaaataatcggaccgattcaaaaaaaaaggaatcgggcaaaaaaaaagaatatgattccgtataaaaaagagggcgaaaaaataataaaaaaaagaatcagtccgattccaaaaagaaaaggaatcgggcgAaaaaaaaccgggtgaaaaaaacctggaaaaaaatgaatccgattctgtggacgcgataaaagagggcgaaaaaaaaataaaaaatgaatatgtctaattccaaaaaaaaagaattatatgtgacgcggtaaaaaaatcgaatcctattatatgtgacacgatactatatatctctatctctacttacttataaaattgaaaacgtttctgtcgtccataataagtaataacaaaaaaggcgaaaaaaacattaaaacaaaaaaagaaagtccgattcaatttactttcgtcgtccgtgaaaatattatcttatcttaatctcaatctttccgagaggaccgagcggcgccctccgtccccgcccgcgcgatgaaacgccggccaaaacaaaaaaggaaaaaactgaaattgagcaaaggataaacttgattgaagttcccaaaattaaaagaggataaacgatattaaaacttccctaactcgaaaacagggaataaaatagattgaaatttcccgacaaaattccccaaattcgaagaaccctaatttcgggtcagaacctaagagtcaaagtccaaatcaattaagctaagggttcgggttacttaacggacttgaagcccctaagctcaccggagctttctgaggagcggcatcgccacaccttcacctcctcgcagtcgcgaagggttccctgtgcgcgcgctgtcctggagcacccctccaccgtccttggcgtcgcacctctcgccgacgaggtctaggccgctcggcgctcatcgccgtttgtgcgcccgcctagctaggccaccgtcgccgccttcgccgtcattccgctcgcttgttaccggagagaaatgggatcgggagagagggatttgggagctagggttttgcccctctctccctgtcggtgcttcatccgacgcggggaatatcggagccatccattagatcggacagctcagattcgcccagcgtcgggccgccgctgccgattacgctgcgcttaatgggtcgcggaagtgcatcagaccatctccgcataagtaggccgcgcttagctgctcggcttgcgggccgtcgaattgactcagctcgccgaagatgggctagcccaagtttgggccggcttgggaagacctgggccaaaagcaaatttgatcaaacaatgtggctcagattttttaaattaaagtccgttggataaactcctaagtaggctcgaaaaataaatctaaaactaaatcctaaatcctatgctaattcatcaaattagattcggttctacctatttgttaatatatcaaatagacttgatttttaccgatttgaggttttcaaggtgtcacattatcaaatggtgtttttcccgttgcaacgcatggacactattgttagtatatacacatatacagatgcgcgtgacttttaagttatctctaaattcttctatatatacatcctagtccacacaatgccaccaaattttgtattacatatctaccttgttgcagccaattcttaagcgtatgcaccacctttcttcccttcccaaagtagtacagcagagcaaaaagcacagcagagcagagagaaggaagaggtaatggtcctgggcgactgccaatagatggggaggggttgcagcctataagacaactctaagaatggagtcggcagagagaatgaaggaatgcagattttgagttttttttcatcgaaatttatttttcagtctttgcttttagatcgctaagaacacgtatataaaaattttattcacaaattacttttcgtttgcaaattcttagaggggcaattaatacaaattatgttcaaaaatcagtttagttgcactgtttagcattgcgaatctcaaattgtagaagaggtcaagccccttgctcgcctccccattcctcggccactcaccgagcgagtttttgccacttaagccatactttcatgtttctattcgttgctcgtcttcatagtaaagaaaccagaacccttaattagctaaatcatgccacgaccttttcttgttgagtatcaacccgatattagaagatgagggaattaagaacgacttcaaatcaatggcataaatcaaaattttttacttgcctagggtgtcttcttcaactttaaaatatactgatcttttggatatgcttatagagatatatagagtatacatgtgtacgttcatatgggtaagtatacatgcgttgtgagcgtctgtatctgtaccgtgtttcttaaagaaaaagttcgatttataccatcgactttaacatgtgatcttttctttagtcaagaggtaaaatgagcttatgtcttcactgtacaatgatttgtctctgtctctctcttgtcacatgcctaatactcctaattttgccaaagatctaggacgcactagaccccaatacttttgagctcacttgagaagagaagatcaattcgatttgaattgatgattactacccagtcggcttcagcagttgcctttgtcaaagcaaaaggaaagtggtgacaaaaagaagaaaagaaagaaaagaagaaaccaagagagagaagaatcctttggctgtgtggaaagttggatagccaaaggtgaacaccaacagtgcttactgtcactgccagtaccactgcttcagttagccatggatggatacttggatacctctccagcttttgcaaccttcttgcttatccttgatgctgcccttgcttgcaagcaaggcaatctgccccttttcgttgtacaaaatacaaaagatacgtataagggtgacttttccaatccacgaggaaataccaaattttaccctataaaatggtacttccggataccaatcaagaaccataagatttctctacatattgagagaacatgttgtatttacagggacacagacgaaggagaacacatgaacaaagtggactaacatagtttcagaggcaatgcttaagtaccggtttttttcagaatcttggtcaccttggcctataacattacctacgtttaccagaattcatcagataaaaattcgaatccaaaattttgaattcaacaacgcttaccgccagtatcatgaaccctgtagtcctgagctgaacacattattaaaacaaactgttgcttcactgactaaacccttgtcactactgaatcgtagacaagggcagaagcataaccaaccaaagaaccatattaccggtatgcagcttttagatataaggtactgaccattttaggacacatcattgagatggccacaccttcctatggctgttaatttttgttacctgcacaacaccaagcatagtaacacaaacatcaaaaggaaagggaacatgtatcaatccctattaaaaaaagtatgagcaaatggcacaatatccgcgacaacaggttcgaacacacaaaaacctgggtacacacaaccaaaggagaaaggatagaggagtatcagctccctgatctctgtccccaattggtagaaactacaaaagaagtctcgatgaacatgaaattaacgaagtcttggatatatgtaaaactgtcctagcttgccaccacagtgcagtcactgtaacactgatcctggaggaaataccacatttcagagcaatgatcatgtcataggatcagcaatgcaatgtgcacatgggtgtacaacagccagcctgcctgcctgcctgcttgtttacctacaaagagaattcatgattaaaatgacttatagagttcactgtctaaaaaaacttattttaaaaaaaaattagcttgcatagttctagaatagaatggaaggagagagagagcaaggcaaacatttcacctttgatacaaagccttgatatcctgacgaataacatcagtctccaacaattcatctccagagccatcaatacagacttgattcagcttgaagtcttcagttgtgcagcgcccgctccattggaaccatagctttggtatgacttccttgttgaatgcagtttcatgggtcttctcctctggagaatcagcagctacaagcctatacacaaacactttcttcttctgtccaggcctgaatgtgctcccgatggcttggcgcgtaacagacaggttcaggtgaatatctaggatgacaattcttgatgcacacacaagggagatgccctccccaaatgccttgatggaaccaaacagaacttttgcatcggcagagccattgaactgatccattgccaattgtccatcttccatgctagtatcaccatttatcacaaaaatttccttccctacataccagcccatctccttaaccagcagcctttccaaaaatttcatggggagtgtatactgactaaaagcaactaatttctctcctgcagagttggcaagcgcaaggatgttcagaaaaaacctggccttcaccccatctcccaggtttatactgttgaccaaactatcaactctgtcatccctatcaacagcattagcttcagaaatttctgaaaggcaagggtgaacatagagtgcagcccctactgcgcttgttttgagcatctcatggtcttcttctaacttgcaaagaatgtctttctgcttgggactgagttccaagaacacactgaagtctagtaagccaggaaattcattcaagtcctcacccttacagtagtgaagcacatctttggttagttctccaagacttctgataacattaacttttcttgtgaagttatcatcattcagcagggtatcttccactgactcagagatctctgttatactcctggcacttgatatttctagttgacccatcatacgtgtaacaatggaccaggatgtctccgtcttaagaaaacctgggcgtacgagatccaaggtgttgagcacttccttgacatgattatggaagagtgtaccagacatgaccactttgcatggcgtttgcactttgcgcgcagattgtagcatatcagtctcatgaatgctaggtgtatggccctcatcaattatcaacaagctggggaccataagaagcatgtccctgcattcagctacagcattttcatccctatcatcgcagacaatctgggtgaaatgcttagatccaacaaagagtatgctcctcttggagctccaaaattttaggacttccagttgctctactctttcgtcagccttaatagaatcaaaatcatacagtggtatgtcctccacttgccactgctggaattccatcttccatgtacctaatatcccttcaggaagcacaacaagagaccttgcagtggaatgtcttgccatgaagctttgaatgaaagtgataagcataaatatttccctgaacctggggcatgaacaagaatgcagcctccaggttcatcagtgaccaagttattaatcaggaatttgaatccttccaactgatgaggccggatattcttggcatgtcttggatgaatggcaatatctgaaaatatgaagtcttcagaaagactaatagcatcagagactaccttcttcaagcaagcctcatacgtatttgttcttttccttgaagcctgatatgaagtgaacattaaaaacacatttccaaattatatattctcttctatgtaaatgttacacattcaaaatttcaagatcaccaagtaaaacttgataatagtttatgaaagtattccaagttacactgaatgaaaaggaaacaaataaataaatccaccacaatactgacaaatatactaccacaagtcagaagtttttgaggaaatagaagttatttagaagttaagtagtttttctaaaacatagttagcatttttattactatatatttcacaaattcttattgactttgacatccacttccatcgttattgtcatgactttgaaaccatctagttcgcctccatttgtaccatgggcataagagatattaggaggaagggtgatgtgtacaacaatgcaaatgtatagctaacagtaggcatggaggtttcatgtccaaaattaatttggagggtctgcatctctaatgggggactgaaaagaactccctaaaggtatgtgcttttcctcttaagaaagaaaaacaaaaaaggtgtgcactcatatttttcacaaattgtagttacaagcatatatagagcatcttgtttttgcaaaatgaacaaaatttaacctcataacttaagcaaattacgaacctttttccactgatagtgaaataatgagtcagctttcctcacgaccaaaccacattcatggcatacatggcccagatcttcataaacatgaatatcgtggttgcaattgtccaactgttttttattattcacttctgatgtgtcgagctgtccaaaacatataattagaatacaaactaaacaaggattgacttcaaaagcatgtattttgtggtttcaacttgtacctgtgtgctttccgcagccacatagaaagcaccccaaagatccttaacataatctgttgctggatctagctcgccttttctttttctgtccctagggatggccatagtgccatcactgaaatgaaagtcctggtcagatttctgttgtttttctcccatcttctccgtgttgctaatggcctacaataagcaaaagtgagtgattgttggaatagctagaagtagaatagatttaagaaagagtaaatcgtctcgtgggtattggcaagggggtgcacgtatttacaacttaaaagttattaagcccatgggttaaaaaattggcaggtgggtatatttgagtacaactagagatatttcaaaatttcagaaattttggactattttggcagttgaacaaactttagctgaatttgataaatttgctaaattaaacaaatctgatttttttttgggactaaagaagtccgtatcaaggagataaaataacccaaaaaattgtatccaaaatattgaaccctgttcatatgcaaagttgaatattccatgcaagaattgcaagtgaaaggcacgtaccagaattattgtttctctttcttctactttctccacagaagaattgcaaattcttcctagaacttctatagtgctgtatccccaaccacaaatcctattttcaacagaaactgcaatatggatgggactcagattgatttcagtgcttaattgaaatagatagccccgtctatatatatatgtacacatatatacagatgcgcgtgagttttaagctatctctaaattcttctatatgtacacacacatatatacagatgcgcttgacttttaagctatctctaaattctaaattaggaagacttaatccaatattaattaattttaatgctatagccctgcatgccactagtaacgcgtccccttctcccgcttggcctaatacccataacacaacaccctttcttttgagcagctcatcattgagctgcaacatgaccttatattgtaggcccgaacgacacgccataaagatcctaacataggtaagacttgaagcattttacatctcgacttcttacattgttatgaaagaaaaataaactaagattagtgtagattgttgtgccatcctattgtcatcaaccaggggtgggccctatccagaaccacttagaaaaaggacagttccatgccctaatagtaccctagaagcctgtttggactacttgatagaataccccgaagttagaagaacctttgcaaccttaatattagcccaatgcagccaccccaagagaacagaagcgcatggggccgccacgccgtgcaccgttccagtccccctccacttctccagggaacggcacaacctcccccacctctctgccttgcaccattcctgcccctcccaggaaccaccacctcctgtgcttctttgcaccacaccggacggagacaacaccacctttcacgaatcagatcgcaacgccttcgcttccttcccactatgccactgttgtcgctgcctccgcctatgatgagggcagcagtgtctaaactgttgccagaaccagacat

More
CDS seq

atgtctggttctggcaacagtttagacactgctgccctcatcataggcggaggcagcgacaacagtggcatagtgggaaggaagcgaaggcgttgcgatctgattcgtgaaaggtggtgttgtctccgtccggtgtggtgcaaagaagcacaggaggtggtggttcctgggaggggcaggaatggtgcaaggcagagaggtgggggaggttgtgccgttccctggagaagtggagggggactggaacggtgcacggcgtggcggccccatgcgcttctgttctcttggggtggctgcattgggctaatattaaggttgcaaaggatctttatggcgtgtcgttcgggcctacaatataaggtcatgttgcagctcaatgatgagctgctcaaaagaaagggtgttgtgttatgggccattagcaacacggagaagatgggagaaaaacaacagaaatctgaccaggactttcatttcagtgatggcactatggccatccctagggacagaaaaagaaaaggcgagctagatccagcaacagattatgttaaggatctttggggtgctttctatgtggctgcggaaagcacacagctcgacacatcagaagtgaataataaaaaacagttggacaattgcaaccacgatattcatgtttatgaagatctgggccatgtatgccatgaatgtggtttggtcgtgaggaaagctgactcattatttcactatcagtggaaaaaggcttcaaggaaaagaacaaatacgtatgaggcttgcttgaagaaggtagtctctgatgctattagtctttctgaagacttcatattttcagatattgccattcatccaagacatgccaagaatatccggcctcatcagttggaaggattcaaattcctgattaataacttggtcactgatgaacctggaggctgcattcttgttcatgccccagggatattaggtacatggaagatggaattccagcagtggcaagtggaggacataccactgtatgattttgattctattaaggctgacgaaagagtagagcaactggaagtcctaaaattttggagctccaagaggagcatactctttgttggatctaagcatttcacccagattgtctgcgatgatagggatgaaaatgctgtagctgaatgcagggacatgcttcttatggtccccagcttgttgataattgatgagggccatacacctagcattcatgagactgatatgctacaatctgcgcgcaaagtgcaaacgccatgcaaagtggtcatgtctggtacactcttccataatcatgtcaaggaagtgctcaacaccttggatctcgtacgcccaggttttcttaagacggagacatcctggtccattgttacacgtatgatgggtcaactagaaatatcaagtgccaggagtataacagagatctctgagtcagtggaagataccctgctgaatgatgataacttcacaagaaaagttaatgttatcagaagtcttggagaactaaccaaagatgtgcttcactactgtaagggtgaggacttgaatgaatttcctggcttactagacttcagtgtgttcttggaactcagtcccaagcagaaagacattctttgcaagttagaagaagaccatgagatgctcaaaacaagcgcagtaggggctgcactctatgttcacccttgcctttcagaaatttctgaagctaatgctgttgatagggatgacagagttgatagtttggtcaacagtataaacctgggagatggggtgaaggccaggttttttctgaacatccttgcgcttgccaactctgcaggagagaaattagttgcttttagtcagtatacactccccatgaaatttttggaaaggctgctggttaaggagatgggctggtatgtagggaaggaaatttttgtgataaatggtgatactagcatggaagatggacaattggcaatggatcagttcaatggctctgccgatgcaaaagttctgtttggttccatcaaggcatttggggagggcatctcccttgtgtgtgcatcaagaattgtcatcctagatattcacctgaacctgtctgttacgcgccaagccatcgggagcacattcaggcctggacagaagaagaaagtgtttgtgtataggcttgtagctgctgattctccagaggagaagacccatgaaactgcattcaacaaggaagtcataccaaagctatggttccaatggagcgggcgctgcacaactgaagacttcaagctgaatcaagtctgtattgatggctctggagatgaattgttggagactgatgttattcgtcaggatatcaaggctttgtatcaaagtttctaccaattggggacagagatcagggagctgatactcctctatcctttctcctttggttgtgtgtacccagctcaggactacagggttcatgatactggcggtaatgttataggccaaggtgaccaagattctgaaaaaaaccgttccatacatattgcagtttctgttcaaaacaagatttgtcgatggggatacaacactacagaagttcaggaagaatttgcaattgccagtggcaacatggagaagatggaagaaaaacatcagaaatctgaccaggactttcatttcagtgatagcactatggccatccctagggagagaaaacaaaaaggagaggtagatccagcagcagattgtcttaaggatcgttggggtgctttctatgtggctgtggagagcacacagctcgacacatcggaagtgaataataaaaaacagttgaacaattacaaccatgatattcatgtttatgaagatttgggtcatgtatgtcatgaatgtggtatggttgtgaggaaagctgactcattatttcaccaacggaaaaaggttcataatttgcttaagttatga

More
Protein seq

MSGSGNSLDTAALIIGGGSDNSGIVGRKRRRCDLIRERWCCLRPVWCKEAQEVVVPGRGRNGARQRGGGGCAVPWRSGGGLERCTAWRPHALLFSWGGCIGLILRLQRIFMACRSGLQYKVMLQLNDELLKRKGVVLWAISNTEKMGEKQQKSDQDFHFSDGTMAIPRDRKRKGELDPATDYVKDLWGAFYVAAESTQLDTSEVNNKKQLDNCNHDIHVYEDLGHVCHECGLVVRKADSLFHYQWKKASRKRTNTYEACLKKVVSDAISLSEDFIFSDIAIHPRHAKNIRPHQLEGFKFLINNLVTDEPGGCILVHAPGILGTWKMEFQQWQVEDIPLYDFDSIKADERVEQLEVLKFWSSKRSILFVGSKHFTQIVCDDRDENAVAECRDMLLMVPSLLIIDEGHTPSIHETDMLQSARKVQTPCKVVMSGTLFHNHVKEVLNTLDLVRPGFLKTETSWSIVTRMMGQLEISSARSITEISESVEDTLLNDDNFTRKVNVIRSLGELTKDVLHYCKGEDLNEFPGLLDFSVFLELSPKQKDILCKLEEDHEMLKTSAVGAALYVHPCLSEISEANAVDRDDRVDSLVNSINLGDGVKARFFLNILALANSAGEKLVAFSQYTLPMKFLERLLVKEMGWYVGKEIFVINGDTSMEDGQLAMDQFNGSADAKVLFGSIKAFGEGISLVCASRIVILDIHLNLSVTRQAIGSTFRPGQKKKVFVYRLVAADSPEEKTHETAFNKEVIPKLWFQWSGRCTTEDFKLNQVCIDGSGDELLETDVIRQDIKALYQSFYQLGTEIRELILLYPFSFGCVYPAQDYRVHDTGGNVIGQGDQDSEKNRSIHIAVSVQNKICRWGYNTTEVQEEFAIASGNMEKMEEKHQKSDQDFHFSDSTMAIPRERKQKGEVDPAADCLKDRWGAFYVAVESTQLDTSEVNNKKQLNNYNHDIHVYEDLGHVCHECGMVVRKADSLFHQRKKVHNLLKL

Function Protein CHROMATIN REMODELING 35 [UniProtKB/Swiss-Prot:Q9SIW2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_Ung0042970 OsLiXu_Ung0042970.01 ChrUN-Ctg316 201435 210800 - NAM
CDS seq

atgtctggttctggcaacagtttagacactgctgccctcatcataggcggaggcagcgacaacagtggcatagtgggaaggaagcgaaggcgttgcgatctgattcgtgaaaggtggtgttgtctccgtccggtgtggtgcaaagaagcacaggaggtggtggttcctgggaggggcaggaatggtgcaaggcagagaggtgggggaggttgtgccgttccctggagaagtggagggggactggaacggtgcacggcgtggcggccccatgcgcttctgttctcttggggtggctgcattgggctaatattaaggttgcaaaggatctttatggcgtgtcgttcgggcctacaatataaggtcatgttgcagctcaatgatgagctgctcaaaagaaagggtgttgtgttatgggccattagcaacacggagaagatgggagaaaaacaacagaaatctgaccaggactttcatttcagtgatggcactatggccatccctagggacagaaaaagaaaaggcgagctagatccagcaacagattatgttaaggatctttggggtgctttctatgtggctgcggaaagcacacagctcgacacatcagaagtgaataataaaaaacagttggacaattgcaaccacgatattcatgtttatgaagatctgggccatgtatgccatgaatgtggtttggtcgtgaggaaagctgactcattatttcactatcagtggaaaaaggcttcaaggaaaagaacaaatacgtatgaggcttgcttgaagaaggtagtctctgatgctattagtctttctgaagacttcatattttcagatattgccattcatccaagacatgccaagaatatccggcctcatcagttggaaggattcaaattcctgattaataacttggtcactgatgaacctggaggctgcattcttgttcatgccccagggatattaggtacatggaagatggaattccagcagtggcaagtggaggacataccactgtatgattttgattctattaaggctgacgaaagagtagagcaactggaagtcctaaaattttggagctccaagaggagcatactctttgttggatctaagcatttcacccagattgtctgcgatgatagggatgaaaatgctgtagctgaatgcagggacatgcttcttatggtccccagcttgttgataattgatgagggccatacacctagcattcatgagactgatatgctacaatctgcgcgcaaagtgcaaacgccatgcaaagtggtcatgtctggtacactcttccataatcatgtcaaggaagtgctcaacaccttggatctcgtacgcccaggttttcttaagacggagacatcctggtccattgttacacgtatgatgggtcaactagaaatatcaagtgccaggagtataacagagatctctgagtcagtggaagataccctgctgaatgatgataacttcacaagaaaagttaatgttatcagaagtcttggagaactaaccaaagatgtgcttcactactgtaagggtgaggacttgaatgaatttcctggcttactagacttcagtgtgttcttggaactcagtcccaagcagaaagacattctttgcaagttagaagaagaccatgagatgctcaaaacaagcgcagtaggggctgcactctatgttcacccttgcctttcagaaatttctgaagctaatgctgttgatagggatgacagagttgatagtttggtcaacagtataaacctgggagatggggtgaaggccaggttttttctgaacatccttgcgcttgccaactctgcaggagagaaattagttgcttttagtcagtatacactccccatgaaatttttggaaaggctgctggttaaggagatgggctggtatgtagggaaggaaatttttgtgataaatggtgatactagcatggaagatggacaattggcaatggatcagttcaatggctctgccgatgcaaaagttctgtttggttccatcaaggcatttggggagggcatctcccttgtgtgtgcatcaagaattgtcatcctagatattcacctgaacctgtctgttacgcgccaagccatcgggagcacattcaggcctggacagaagaagaaagtgtttgtgtataggcttgtagctgctgattctccagaggagaagacccatgaaactgcattcaacaaggaagtcataccaaagctatggttccaatggagcgggcgctgcacaactgaagacttcaagctgaatcaagtctgtattgatggctctggagatgaattgttggagactgatgttattcgtcaggatatcaaggctttgtatcaaagtttctaccaattggggacagagatcagggagctgatactcctctatcctttctcctttggttgtgtgtacccagctcaggactacagggttcatgatactggcggtaatgttataggccaaggtgaccaagattctgaaaaaaaccgttccatacatattgcagtttctgttcaaaacaagatttgtcgatggggatacaacactacagaagttcaggaagaatttgcaattgccagtggcaacatggagaagatggaagaaaaacatcagaaatctgaccaggactttcatttcagtgatagcactatggccatccctagggagagaaaacaaaaaggagaggtagatccagcagcagattgtcttaaggatcgttggggtgctttctatgtggctgtggagagcacacagctcgacacatcggaagtgaataataaaaaacagttgaacaattacaaccatgatattcatgtttatgaagatttgggtcatgtatgtcatgaatgtggtatggttgtgaggaaagctgactcattatttcaccaacggaaaaaggttcataatttgcttaagttatga

More
Protein seq

MSGSGNSLDTAALIIGGGSDNSGIVGRKRRRCDLIRERWCCLRPVWCKEAQEVVVPGRGRNGARQRGGGGCAVPWRSGGGLERCTAWRPHALLFSWGGCIGLILRLQRIFMACRSGLQYKVMLQLNDELLKRKGVVLWAISNTEKMGEKQQKSDQDFHFSDGTMAIPRDRKRKGELDPATDYVKDLWGAFYVAAESTQLDTSEVNNKKQLDNCNHDIHVYEDLGHVCHECGLVVRKADSLFHYQWKKASRKRTNTYEACLKKVVSDAISLSEDFIFSDIAIHPRHAKNIRPHQLEGFKFLINNLVTDEPGGCILVHAPGILGTWKMEFQQWQVEDIPLYDFDSIKADERVEQLEVLKFWSSKRSILFVGSKHFTQIVCDDRDENAVAECRDMLLMVPSLLIIDEGHTPSIHETDMLQSARKVQTPCKVVMSGTLFHNHVKEVLNTLDLVRPGFLKTETSWSIVTRMMGQLEISSARSITEISESVEDTLLNDDNFTRKVNVIRSLGELTKDVLHYCKGEDLNEFPGLLDFSVFLELSPKQKDILCKLEEDHEMLKTSAVGAALYVHPCLSEISEANAVDRDDRVDSLVNSINLGDGVKARFFLNILALANSAGEKLVAFSQYTLPMKFLERLLVKEMGWYVGKEIFVINGDTSMEDGQLAMDQFNGSADAKVLFGSIKAFGEGISLVCASRIVILDIHLNLSVTRQAIGSTFRPGQKKKVFVYRLVAADSPEEKTHETAFNKEVIPKLWFQWSGRCTTEDFKLNQVCIDGSGDELLETDVIRQDIKALYQSFYQLGTEIRELILLYPFSFGCVYPAQDYRVHDTGGNVIGQGDQDSEKNRSIHIAVSVQNKICRWGYNTTEVQEEFAIASGNMEKMEEKHQKSDQDFHFSDSTMAIPRERKQKGEVDPAADCLKDRWGAFYVAVESTQLDTSEVNNKKQLNNYNHDIHVYEDLGHVCHECGMVVRKADSLFHQRKKVHNLLKL

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0243866 SBH 0.241368 0.000000 1.178889
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g14610 SBH 0.095795 0.025115 0.253935
Nipponbare | IRGSP 1.0 | RAP-db Os08g0243866 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_08g0008340 SBH 0.033396 0.609112 0.685795
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0008400 SBH 0.046902 0.000000 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0008500 SBH 1.458778 27.891726 24.602667
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0008470 SBH 0.049063 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0008320 SBH 1.133675 3.069562 3.888139
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0139200 SBH 5.4870605 9.9302505 21.6928845
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0008320 SBH 0.091529 0.126266 0.245832
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0132400 SBH 3.11243 4.856335 6.517291
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0007950 SBH 0.040705 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0008040 SBH 0.073553 0.985639 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0007860 SBH 2.527138 8.739504 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0008560 RBH 0.000000 0.000000 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0008030 SBH 0.000000 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G008260 SBH 0.000000 0.296771 0.646885
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0008110 SBH 0.0 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.