Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0034450 | OGI:06000860 | 5/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg251:410750-418843 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttaatggacagctttcaattgtatgatttgtccttccacaccttgtgcaatgccttttggtacctcttttagcttctccactattccttttgtcctggcagatttttttccttttgtgtttgctaaatcaaggtcctcaatttcttcttcttcttcttcttcattaagtgtttcttgattcgcttgctgtccaattgcttcttctattgtactgtttccgtcatgcggcagattttgatctccctcttcaagcaacaagtccagatttccatcaagcttgtccatttgatctagcatgtaaaggtatgtatcttttctctttgaggcttttgaagccatgtctgccattcttcttgatagcacattaaacctcaggaccgaactgttttcattagtagctttattctcaattctagctgtgcattttctctcctttttcctccatctttctattatatacttatcaggtatcttgctgattttcagtgccaacatcactttgagaacatggctacataggatCccatctttggagaatttcgcacatatgcaaacaaagttttcttgagatatgtctgtcaagaccacatatctcctttgtctgaattctttttttgtcagattctcagctgcatatacctcatatgtctttccatgttgtatagctgccacttcaagatttaatgtctcccttaattcatcttgaaacttttgaaaattcccaagttgtacagctcagatgcttgcaattcaatgctatagcttgaccaaaatttctttggctttttcgttctggacacatgatctttgcagtattcagtgtcgaagattgtgtcattgattgtgtcatattctttcaaaaatgtcatcacacagtgtgtcgggcctaccccccttttgaaccttgcatttgtcccttcacttagtgctgtactatgaataaatgggcagaaatcatacttgaagtagactggtatatagttttcccttgttctccacattatctctaggtatttgatgttttgcaaactatgcttctcaatcatttgaggccacaatgtttcaaactcaacccttgtcaagcagttgtgaactatgtcatagaattcgttgtacagatctttgtttttcttgtctgaaaatgtgtttcctgtcctttctctccacttcttcataatatggaacaagcaattcctgtgctttgtatttgtgaacacttgttcaattgctTATTTCATTGCCAAGTCTTGGTCAGTTATGATTGTCCCGGGATGTTTCcctcccatagctgttaggaatgtctcaaaaacccatttgaaagtttctgtagtctcatctcctaaaaatgcacatgcaaaaaggcatatgctgccatgacctgtaaccccaacaaatggagcaaatggtaggttgtacttgttagttttgtatgtggtgtcgaaactaacaaattcaccatactcctcatatagctgagtcgatctcccatctgtccaaaacatgctcttgaccttattgttctcatctagcagcaacttgtagtagaaccctgggtcttcagcttctttttgttttagatagtccatgacttgcttcatatcagtattttttgtctctgaattaattgttgttgacacattgctaacatctttcttgttatatggcagcgccgacaatcctcctcgcagaaatgacagtatcacaatcatgcttcttgtaggtatgttgcactctttcagagtcctaatcaaccttttttcttctactgtcatattcttatgcgatttaaggaattttgcttctctgtttgggcttagtacgtgattgtgttctaggttaagccttgatattttccaattttttccaacctctttcaccaccatcaaacacttgcaatttgttctgtcaatgacattggtatttctttgttcttcacctgtcttctgtttattcttttctccatcatcatttttcccatacctgtagcactggtatgtatatcttgttatcttaccattcctcttcttgcttgttgtcttgtagtggtgtgtgatgacaattgagaatccaacaagatacgcataaaagttgaagaatccatgagcctctttgtctgacctaaattccattccaatatcaggtatgtgtttcttgtcaatttgtactttgttcccctcttcattttccaagaagttgtcaatgtcttcttcacttatagcttctgcactgctatttgcgtttgaagtgcttgcttcatttatacttgtaattgtaacttgttcaccacaatcttgcacattctgcccatatgttgtctcttggttctcttttgtgctttgatcatatatttctccattgtgtatctgaagaaaaagtgaacagatattagcatggcacatgtagagaaaataaattaaatcaagggatgatatttcgtctcaatagccgcaaactttttggtactgtacctcttcagcctcatttcctgaatttaacagttgaagatcatcaatttctcctatgtttggatcatcatttccttcatttgtgatgttggtatcatccctctgcaagttgactaaatttaaattaaacaatctctttttatgttatttcaaatgtgtttttttttacttggcagtaacatacctttcttttgaagtgtatatttttgattcatacaactcctcaatacttttttctggtccaccctgcataatttagtatttataatacttagcaattatataatactagtatattatgatatcatgatattctaaattagtttgaaaatatcacctcagtccatgtcaccatgttgctgttgttgtataacctatcaaattcttcatagctccagtgttctgtcgatatctgttcttcatacaatctatcatgttgatgtgactcttgaggagaaaacctgcttgttgtcaaaatcatggaattctgtagtgtaaaaataaaaactgttagcattgcctttcaatataaaattttcaaatttgtttagcctctattgttgaaaagtatttgctcacggtaaatgctactggtgtctgtagtagatttgtatatctctctactcgttcctgcaattttgaaaatggttagtaatctattcatttttctgtttgcagggacaaatgttttttttactgaagatgcttacttcatttgcttgcaagctgacacgtggactttgaattatctgttgcatgaggttagtgtagctcatttgtcctccctgaacctgttttatttaattacatttattcatcaaagaaataaatatattcttcatttttgtaaagcatgattgtacttactagtctttcattttcattaagaaatgtgtattgatcataaagtagttgtgctttattttcgccaatctctgatccaattgtccctgactttttgcatttttcaaaatcctgcaggtaatgagatcctggaattgaaaaagaaagcatcattagtcaaaatcagtgtaagtactgcaaaaattcacctctaattttttaggcatactaatgcattatccatagcctctaattcttcatatgatgttttttgcttaatgtattcgacttatagtccaattacagtccatatgcactgtaattacagttgtaacttctattatttctcactgtaactgaatgcaggtagttagattaTttttattcatcatgctttgcatctaaattttgccatatataaatttgtgctagatgtaatttttgacaaatatcagagatggtgcataataataggtaagcatgatttttctaaccttcaactgtcttcttgatttttaattcttcagactcgattatgtctcttatacatgtctttgattgtgtattccctgtaacttaagcatgcaatctatgacatcctgcatgtttgggtcattttatactatgttacaatctagaataatgttgattctatcgaaagagtactgaatttctacgagaaagttaagcatgattccagttacagtccatatgcactgtagttacagttgtagcttttgttatttttccctataacagaaatgcatgtataggttatatgtaatatatttttagaacatgttagaataggaagtaatgcatgagtactgaaatttctgagagaagctacagtaggaattaatgctgatgttattgcgttagtactgaaatgaaaattcaacacaagtatgttcggtgcatgttttgtgtttatataagtacttaattttttatttcatttgaataggaaaatctgcatatagtttagtgacataattttgtaattatgtcattagattctttgcagattttgttgctcaaatgtagtcaaaaattagatctgttatagttcaactttagttgcatagaaagtttagaatgctagcccactataattacaatgtttcaatagtatcttgaaagattttgcatgaatactgtaataacaatgccattctaatctggaacaactttggtgttctgaattttggtttcttcagtatgttttgccataatattgctcttatctgattcttggcttttttttttgcacatcttgtactgcttcatgaccagcaactggagaaaattgaagttttcatgagaaactacagtgttatgtttggtaagttatgaaagaaacatttatacttgtttttttgtacctttcatctgtattggttcttttttcttggtctgcaacttgatgtccttggttgtttctgcagctgaaattgttcctgcaaaatgttattgaaagcattacaaagcatgttagttttgtatgttctaggaaatctaactaatcaacctaaatattttggttttcatatgctctaggtaatctgactatcaaacttAaatatttttgggtttcatgcagtctgaaattatagtaattataacttaaaacatacttacagttcaactcatcaccacttacagtgcagttacagtcaaaatatacctcacttacagttgtaatttctgttatttctcactgtaactagctgttggtagttagagcttgtaattgattgacattggtttattactgatttgtgtgaaaactaggacacttagtttgggaacccttgggactcttttttttggttagttgtgcatgcaaaagttagaatatgtgtgcttttagtttcataaaaacatagtgagcttgtaatgcttccccttgtgttctaggttttttttccaatcaatgcagtgtatggtaatcatccaTttttgaattagttatatgttttactgaaatttagctagccttcttgcatcattgcaagtgtgaggccatttcatttatgttgtctgttagtgtatgcaaccaacattaattttttttctttgtctttgcatagattctgattgagtgcttcctggacataactcttatttgtgtactaattcttttcattcaaatagaaaaggagaacttgtgcctttatggtttattagtgctttttatttctgttgcagcgtttagatgttttctcttaggaaaataccctagaaaaatatatctcttgaggcatttgaattgctgatctaaatctgtatatgatgcccacttcttacatctagtgatttagttaagttgttttcaaatggtattttgagttatgaattttgtttatcagatgaagtcaatattttaggtttcatgtagtcttaaaacacacttacagggcaactcatctccacttatagtgtagttacagtggaaatgtacctcacttacagttgtaatttctgttctctctcgctgtaactgactgttggtagttagattcctcctattttagctccaaagttatatccattcaataactaccagttactttatgctcactatttatagtctttccctgttgatttgaccgaagcttcgcattcttctcgtcaggtagcacatggctcatttgtgtgctaacttaggctaaatcactagagagcgaaactttcactttgtgcaaatatatccagttggttgctaagagcaatcccaaatttgatggttctgtatactcaaattggctgcttaaactaaaaatataaatatctcaaaacactggtaaaccaaagaccatattgatactctactttttggatagattataactctatccctgcagaagtgagattcaagtctgtttgttgttaccttaaaacacacttacagtgcaactcatcactacttatagtgcagttacagtagaaatatacctcacttacagttgtaatttctgttatttctcactgtaactggctgttggtagtttttgatattggttttatcagtgaattgtgcaaaaactgagggacttatagtttagggaaccctaggcatcttcatttttttttgatctatgcctgatatatttgtttttgctagttattaatgtaggcctagttttgtactgttattttctattatctgtgttgctttgtgtttcatgcagcaccatccatcactagtataacttaaatatacttacacttcaactcatcaccacttacggttcagttacagtggaaatataccttagttacaaatgtaatttttattatttatttttgcaactaactgttggtagtttgatcttcattttactttctgaacttgtcacggtgtccctgtcaaggtaccatgtatatgtcgaatctagggaggctgatgccctgctagatgggcatttttatagttattatgaatttttagttcagtgttaattttggcatataggactatatgatttcagttctttggttcataaagAaaatttttcatgcacaaagaaaatccccatttttgcagatttctcgttgcatatgctagcagtttacttatgcactgttttctgcaatcctgacaggtgctgttcaggaagaagctgagtttcatggtgtcatttcaagctcaacatatgagatgtgctcctcatttgatcaaattggttgttaaaggttttatagcaaatatcactgattgaatgagcttgtaaacttgttttttttgccaatttttgtgagattccattttgttctctctgtgcacacatggcttccctctgcacacatggcacaatacaaaatttttaatgaagttctgagttagtaatggcctagttttgtactgtgcatatacactgaagaaatattatagtgctgagttagtgacttgagactgaagtgtgcagtctgtgttcttcagatatgatgtggtttttctgaagaatgtaattcttttacttctaggtttattgctcgaatgtgaacttatgatttatcttgctttcgaaatttgaagctgtaaTttttgcattttatgttcttggtaggaggtaattggattgggcgtgggattcactgaagatttcattattttgactttgatttatctgaagaaatatattgttgcttcggtgatttgagactgtaaatctgtaatatgcattttgttttcttgtttggaagatgtaaccggattgggtttggaattcactgaagatttcacatattctctatcactgatggtgtacagtgtgctatctaaaagttatgtatcatttcctagataattgtaaccatgaagttgtctatttaaataatgtagggtgcaagcttgttatatttttactcagaagaatttttgagttctcaataatttgagcagatctggactttgttcttatctagaaactgaagaacatgttgactacttttgttcttgttgaaataataaacagtgaggtgtgtgaggtaccaaaatgatagccctagttgtttataatctaaataaatccccaatttcatccatttctgacaaagattagaaatctgacttctgtttctttgttttttttcaagatttaggatgaaggcaaacagtgaatgatttgtgttgaaatttccagcaaaaaggcaaggatggatgagtggtaggttcatatttacctgggagtttggtttcttttgttagtttcatcttcttggttccatcttcttgatccatctgcttgttcttctttttcttctcctcctttttgtccat
More
|
||||||||||
| CDS seq | atggacaaaaaggaggagaagaaaaagaagaacaagcagatggatcaagaagatggaaccaagaagatgaaactaacaaaagaaaccaaactcccaggaacaatttcagctgcagaaacaaccaaggacatcaagttgcagaccaagaaaaaagaaccaatacagatgaaagggaatacacaatcaaagacatgtataagagacataatcgagtctgaagaattaaaaatcaagaagacagttgaaggatctcattacctgcaggattttgaaaaatgcaaaaagtcagggacaattggatcagagattggcgaaaataaagcacaactactttatgatcaatacacatttcttaatgaaaatgaaagactagttcagggaggacaaatgagctacactaacctcatgcaacagataattcaaagtccacgtgtcagcttgcaagcaaatgaagaacgagtagagagatatacaaatctactacagacaccagtagcatttaccaattccatgattttgacaacaagcaggttttctcctcaagagtcacatcaacatgatagattgtatgaagaacagatatcgacagaacactggagctatgaagaatttgataggttatacaacaacagcaacatggtgacatggactgagggtggaccagaaaaaagtattgaggagttgtatgaatcaaaaatatacacttcaaaagaaagggatgataccaacatcacaaatgaaggaaatgatgatccaaacataggagaaattgatgatcttcaactgttaaattcaggaaatgaggctgaagagatacacaatggagaaatatatgatcaaagcacaaaagagaaccaagagacaacatatgggcagaatgtgcaagattgtggtgaacaagttacaattacaagtataaatgaagcaagcacttcaaacgcaaatagcagtgcagaagctataagtgaagaagacattgacaacttcttggaaaatgaagaggggaacaaagtacaaattgacaagaaacacatacctgatattggaatggaatttaggtcagacaaagaggctcatggattcttcaacttttatgcgtatcttgttggattctcaattgtcatcacacaccactacaagacaacaagcaagaagaggaatggtaagataacaagatatacataccagtgctacaggtatgggaaaaatgatgatggagaaaagaataaacagaagacaggtgaagaacaaagaaataccaatgtcattgacagaacaaattgcaagtgtttgatggtggtgaaagaggttggaaaaaattggaaaatatcaaggcttaacctagaacacaatcacgtactaagcccaaacagagaagcaaaattccttaaatcgcataagaatatgacagtagaagaaaaaaggttgattaggactctgaaagagtgcaacatacctacaagaagcatgattgtgatactgtcatttctgcgaggaggattgtcggcgctgccatataacaagaaagatgttagcaatgtggttgagtttgaaacattgtggcctcaaatgattgagaagcatagtttgcaaaacatcaaatacctagagataatgtggagaacaagggaaaactatataccagtctacttcaagtatgatttctgcccatttattcatagtacagcactaagtgaagggacaaatgcaaggttcaaaaggggggtaggcccgacacactgtgtgatgacatttttgaaagaatatgacacaatcaatgacacaatcttcgacactgaatactgcaaagatcatgtgtccagaacgaaaaagccaaagaaattttggtcaagctatagcattgaattgcaagcatctgagctgtacaacttgggaattttcaaaaatgaattaagggagacattaaatcttgaagtggcagctatacaacatggaaagacatatgaggtatatgcagctgagaatctgacaaaaaaagaattcagacaaaggagatatgtggtcttgacagacatatctcaagaaaactttgtttgcatatgtgcgaaattctccaaagatggGatcctatgtagccatgttctcaaagtgatgttggcactgaaaatcagcaagatacctgataagtatataatagaaagatggaggaaaaaggagagaaaatgcacagctagaattgagaataaagctactaatgaaaacagttcggtcctgaggtttaatgtgctatcaagaagaatggcagacatggcttcaaaagcctcaaagagaaaagatacatacctttacatgctagatcaaatggacaagcttgatggaaatctggacttgttgcttgaagagggagatcaaaatctgccgcatgacggaaacagtacaatagaagaagcaattggacagcaagcgaatcaagaaacacttaatgaagaagaagaagaagaagaaattgaggaccttgatttagcaaacacaaaaggaaaaaaatctgccaggacaaaaggaatagtggagaagctaaaagaggtaccaaaaggcattgcacaaggtgtggaaggacaaatcatacaattgaaagctgtccattaa
More
|
||||||||||
| Protein seq | MDKKEEKKKKNKQMDQEDGTKKMKLTKETKLPGTISAAETTKDIKLQTKKKEPIQMKGNTQSKTCIRDIIESEELKIKKTVEGSHYLQDFEKCKKSGTIGSEIGENKAQLLYDQYTFLNENERLVQGGQMSYTNLMQQIIQSPRVSLQANEERVERYTNLLQTPVAFTNSMILTTSRFSPQESHQHDRLYEEQISTEHWSYEEFDRLYNNSNMVTWTEGGPEKSIEELYESKIYTSKERDDTNITNEGNDDPNIGEIDDLQLLNSGNEAEEIHNGEIYDQSTKENQETTYGQNVQDCGEQVTITSINEASTSNANSSAEAISEEDIDNFLENEEGNKVQIDKKHIPDIGMEFRSDKEAHGFFNFYAYLVGFSIVITHHYKTTSKKRNGKITRYTYQCYRYGKNDDGEKNKQKTGEEQRNTNVIDRTNCKCLMVVKEVGKNWKISRLNLEHNHVLSPNREAKFLKSHKNMTVEEKRLIRTLKECNIPTRSMIVILSFLRGGLSALPYNKKDVSNVVEFETLWPQMIEKHSLQNIKYLEIMWRTRENYIPVYFKYDFCPFIHSTALSEGTNARFKRGVGPTHCVMTFLKEYDTINDTIFDTEYCKDHVSRTKKPKKFWSSYSIELQASELYNLGIFKNELRETLNLEVAAIQHGKTYEVYAAENLTKKEFRQRRYVVLTDISQENFVCICAKFSKDGILCSHVLKVMLALKISKIPDKYIIERWRKKERKCTARIENKATNENSSVLRFNVLSRRMADMASKASKRKDTYLYMLDQMDKLDGNLDLLLEEGDQNLPHDGNSTIEEAIGQQANQETLNEEEEEEEIEDLDLANTKGKKSARTKGIVEKLKEVPKGIAQGVEGQIIQLKAVH |
||||||||||
| Function | Protein FAR1-RELATED SEQUENCE 3 [UniProtKB/Swiss-Prot:Q9ZVC9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0034450 | OsLiXu_Ung0034450.02 | ChrUN-Ctg251 | 410750 | 418843 | - | NAM | ||
| CDS seq | atggacaaaaaggaggagaagaaaaagaagaacaagcagatggatcaagaagatggaaccaagaagatgaaactaacaaaagaaaccaaactcccaggaacaatttcagctgcagaaacaaccaaggacatcaagttgcagaccaagaaaaaagaaccaatacagatgaaagggaatacacaatcaaagacatgtataagagacataatcgagtctgaagaattaaaaatcaagaagacagttgaaggatctcattacctgcaggattttgaaaaatgcaaaaagtcagggacaattggatcagagattggcgaaaataaagcacaactactttatgatcaatacacatttcttaatgaaaatgaaagactagttcagggaggacaaatgagctacactaacctcatgcaacagataattcaaagtccacgtgtcagcttgcaagcaaatgaagaacgagtagagagatatacaaatctactacagacaccagtagcatttaccaattccatgattttgacaacaagcaggttttctcctcaagagtcacatcaacatgatagattgtatgaagaacagatatcgacagaacactggagctatgaagaatttgataggttatacaacaacagcaacatggtgacatggactgagggtggaccagaaaaaagtattgaggagttgtatgaatcaaaaatatacacttcaaaagaaagggatgataccaacatcacaaatgaaggaaatgatgatccaaacataggagaaattgatgatcttcaactgttaaattcaggaaatgaggctgaagagatacacaatggagaaatatatgatcaaagcacaaaagagaaccaagagacaacatatgggcagaatgtgcaagattgtggtgaacaagttacaattacaagtataaatgaagcaagcacttcaaacgcaaatagcagtgcagaagctataagtgaagaagacattgacaacttcttggaaaatgaagaggggaacaaagtacaaattgacaagaaacacatacctgatattggaatggaatttaggtcagacaaagaggctcatggattcttcaacttttatgcgtatcttgttggattctcaattgtcatcacacaccactacaagacaacaagcaagaagaggaatggtaagataacaagatatacataccagtgctacaggtatgggaaaaatgatgatggagaaaagaataaacagaagacaggtgaagaacaaagaaataccaatgtcattgacagaacaaattgcaagtgtttgatggtggtgaaagaggttggaaaaaattggaaaatatcaaggcttaacctagaacacaatcacgtactaagcccaaacagagaagcaaaattccttaaatcgcataagaatatgacagtagaagaaaaaaggttgattaggactctgaaagagtgcaacatacctacaagaagcatgattgtgatactgtcatttctgcgaggaggattgtcggcgctgccatataacaagaaagatgttagcaatgtggttgagtttgaaacattgtggcctcaaatgattgagaagcatagtttgcaaaacatcaaatacctagagataatgtggagaacaagggaaaactatataccagtctacttcaagtatgatttctgcccatttattcatagtacagcactaagtgaagggacaaatgcaaggttcaaaaggggggtaggcccgacacactgtgtgatgacatttttgaaagaatatgacacaatcaatgacacaatcttcgacactgaatactgcaaagatcatgtgtccagaacgaaaaagccaaagaaattttggtcaagctatagcattgaattgcaagcatctgagctgtacaacttgggaattttcaaaaatgaattaagggagacattaaatcttgaagtggcagctatacaacatggaaagacatatgaggtatatgcagctgagaatctgacaaaaaaagaattcagacaaaggagatatgtggtcttgacagacatatctcaagaaaactttgtttgcatatgtgcgaaattctccaaagatggGatcctatgtagccatgttctcaaagtgatgttggcactgaaaatcagcaagatacctgataagtatataatagaaagatggaggaaaaaggagagaaaatgcacagctagaattgagaataaagctactaatgaaaacagttcggtcctgaggtttaatgtgctatcaagaagaatggcagacatggcttcaaaagcctcaaagagaaaagatacatacctttacatgctagatcaaatggacaagcttgatggaaatctggacttgttgcttgaagagggagatcaaaatctgccgcatgacggaaacagtacaatagaagaagcaattggacagcaagcgaatcaagaaacacttaatgaagaagaagaagaagaagaaattgaggaccttgatttagcaaacacaaaaggaaaaaaatctgccaggacaaaaggaatagtggagaagctaaaagaggtaccaaaaggcattgcacaaggtgtggaaggacaaatcatacaattgaaagctgtccattaa
More
|
|||||||
| Protein seq | MDKKEEKKKKNKQMDQEDGTKKMKLTKETKLPGTISAAETTKDIKLQTKKKEPIQMKGNTQSKTCIRDIIESEELKIKKTVEGSHYLQDFEKCKKSGTIGSEIGENKAQLLYDQYTFLNENERLVQGGQMSYTNLMQQIIQSPRVSLQANEERVERYTNLLQTPVAFTNSMILTTSRFSPQESHQHDRLYEEQISTEHWSYEEFDRLYNNSNMVTWTEGGPEKSIEELYESKIYTSKERDDTNITNEGNDDPNIGEIDDLQLLNSGNEAEEIHNGEIYDQSTKENQETTYGQNVQDCGEQVTITSINEASTSNANSSAEAISEEDIDNFLENEEGNKVQIDKKHIPDIGMEFRSDKEAHGFFNFYAYLVGFSIVITHHYKTTSKKRNGKITRYTYQCYRYGKNDDGEKNKQKTGEEQRNTNVIDRTNCKCLMVVKEVGKNWKISRLNLEHNHVLSPNREAKFLKSHKNMTVEEKRLIRTLKECNIPTRSMIVILSFLRGGLSALPYNKKDVSNVVEFETLWPQMIEKHSLQNIKYLEIMWRTRENYIPVYFKYDFCPFIHSTALSEGTNARFKRGVGPTHCVMTFLKEYDTINDTIFDTEYCKDHVSRTKKPKKFWSSYSIELQASELYNLGIFKNELRETLNLEVAAIQHGKTYEVYAAENLTKKEFRQRRYVVLTDISQENFVCICAKFSKDGILCSHVLKVMLALKISKIPDKYIIERWRKKERKCTARIENKATNENSSVLRFNVLSRRMADMASKASKRKDTYLYMLDQMDKLDGNLDLLLEEGDQNLPHDGNSTIEEAIGQQANQETLNEEEEEEEIEDLDLANTKGKKSARTKGIVEKLKEVPKGIAQGVEGQIIQLKAVH
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0034450 | OsLiXu_Ung0034450.01 | ChrUN-Ctg251 | 410750 | 418843 | - | NAM | ||
| CDS seq | atggacaaaaaggaggagaagaaaaagaagaacaagcagatggatcaagaagatggaaccaagaagatgaaactaacaaaagaaaccaaactcccaggaacaatttcagctgcagaaacaaccaaggacatcaagttgcagaccaagaaaaaagaaccaatacagatgaaagggaatacacaatcaaagacatgtataagagacataatcgagtctgaagaattaaaaatcaagaagacagttgaaggatctcattacctgcaggattttgaaaaatgcaaaaagtcagggacaattggatcagagattggcgaaaataaagcacaactactttatgatcaatacacatttcttaatgaaaatgaaagactagttcagggaggacaaatgagctacactaacctcatgcaacagataattcaaagtccacgtgtcagcttgcaagcaaatgaaaattccatgattttgacaacaagcaggttttctcctcaagagtcacatcaacatgatagattgtatgaagaacagatatcgacagaacactggagctatgaagaatttgataggttatacaacaacagcaacatggtgacatggactgagggtggaccagaaaaaagtattgaggagttgtatgaatcaaaaatatacacttcaaaagaaagggatgataccaacatcacaaatgaaggaaatgatgatccaaacataggagaaattgatgatcttcaactgttaaattcaggaaatgaggctgaagagatacacaatggagaaatatatgatcaaagcacaaaagagaaccaagagacaacatatgggcagaatgtgcaagattgtggtgaacaagttacaattacaagtataaatgaagcaagcacttcaaacgcaaatagcagtgcagaagctataagtgaagaagacattgacaacttcttggaaaatgaagaggggaacaaagtacaaattgacaagaaacacatacctgatattggaatggaatttaggtcagacaaagaggctcatggattcttcaacttttatgcgtatcttgttggattctcaattgtcatcacacaccactacaagacaacaagcaagaagaggaatggtaagataacaagatatacataccagtgctacaggtatgggaaaaatgatgatggagaaaagaataaacagaagacaggtgaagaacaaagaaataccaatgtcattgacagaacaaattgcaagtgtttgatggtggtgaaagaggttggaaaaaattggaaaatatcaaggcttaacctagaacacaatcacgtactaagcccaaacagagaagcaaaattccttaaatcgcataagaatatgacagtagaagaaaaaaggttgattaggactctgaaagagtgcaacatacctacaagaagcatgattgtgatactgtcatttctgcgaggaggattgtcggcgctgccatataacaagaaagatgttagcaatgtggttgagtttgaaacattgtggcctcaaatgattgagaagcatagtttgcaaaacatcaaatacctagagataatgtggagaacaagggaaaactatataccagtctacttcaagtatgatttctgcccatttattcatagtacagcactaagtgaagggacaaatgcaaggttcaaaaggggggtaggcccgacacactgtgtgatgacatttttgaaagaatatgacacaatcaatgacacaatcttcgacactgaatactgcaaagatcatgtgtccagaacgaaaaagccaaagaaattttggtcaagctatagcattgaattgcaagcatctgagctgtacaacttgggaattttcaaaaatgaattaagggagacattaaatcttgaagtggcagctatacaacatggaaagacatatgaggtatatgcagctgagaatctgacaaaaaaagaattcagacaaaggagatatgtggtcttgacagacatatctcaagaaaactttgtttgcatatgtgcgaaattctccaaagatggGatcctatgtagccatgttctcaaagtgatgttggcactgaaaatcagcaagatacctgataagtatataatagaaagatggaggaaaaaggagagaaaatgcacagctagaattgagaataaagctactaatgaaaacagttcggtcctgaggtttaatgtgctatcaagaagaatggcagacatggcttcaaaagcctcaaagagaaaagatacatacctttacatgctagatcaaatggacaagcttgatggaaatctggacttgttgcttgaagagggagatcaaaatctgccgcatgacggaaacagtacaatagaagaagcaattggacagcaagcgaatcaagaaacacttaatgaagaagaagaagaagaagaaattgaggaccttgatttagcaaacacaaaaggaaaaaaatctgccaggacaaaaggaatagtggagaagctaaaagaggtaccaaaaggcattgcacaaggtgtggaaggacaaatcatacaattgaaagctgtccattaa
More
|
|||||||
| Protein seq | MDKKEEKKKKNKQMDQEDGTKKMKLTKETKLPGTISAAETTKDIKLQTKKKEPIQMKGNTQSKTCIRDIIESEELKIKKTVEGSHYLQDFEKCKKSGTIGSEIGENKAQLLYDQYTFLNENERLVQGGQMSYTNLMQQIIQSPRVSLQANENSMILTTSRFSPQESHQHDRLYEEQISTEHWSYEEFDRLYNNSNMVTWTEGGPEKSIEELYESKIYTSKERDDTNITNEGNDDPNIGEIDDLQLLNSGNEAEEIHNGEIYDQSTKENQETTYGQNVQDCGEQVTITSINEASTSNANSSAEAISEEDIDNFLENEEGNKVQIDKKHIPDIGMEFRSDKEAHGFFNFYAYLVGFSIVITHHYKTTSKKRNGKITRYTYQCYRYGKNDDGEKNKQKTGEEQRNTNVIDRTNCKCLMVVKEVGKNWKISRLNLEHNHVLSPNREAKFLKSHKNMTVEEKRLIRTLKECNIPTRSMIVILSFLRGGLSALPYNKKDVSNVVEFETLWPQMIEKHSLQNIKYLEIMWRTRENYIPVYFKYDFCPFIHSTALSEGTNARFKRGVGPTHCVMTFLKEYDTINDTIFDTEYCKDHVSRTKKPKKFWSSYSIELQASELYNLGIFKNELRETLNLEVAAIQHGKTYEVYAAENLTKKEFRQRRYVVLTDISQENFVCICAKFSKDGILCSHVLKVMLALKISKIPDKYIIERWRKKERKCTARIENKATNENSSVLRFNVLSRRMADMASKASKRKDTYLYMLDQMDKLDGNLDLLLEEGDQNLPHDGNSTIEEAIGQQANQETLNEEEEEEEIEDLDLANTKGKKSARTKGIVEKLKEVPKGIAQGVEGQIIQLKAVH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | ChrUN-Ctg251 | 413701 | 413925 | - | OsLiXu_Ung0034450.02 | OsLiXu_Ung0034450.02,OsLiXu_Ung0034450.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.046959 | 0.0 | 0.143249 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0009240 | SBH | 0.209964 | 9.611394 | 2.826511 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0009150 | SBH | 0.000000 | 2.711771 | 3.710001 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0015800 | RBH | 0.030823 | 0.116922 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0015940 | RBH | 0.000000 | 2.678253 | 1.981453 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0015430 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0234500 | RBH | 1.2005795 | 3.7074795 | 1.8874225 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0009080 | SBH | 0.123222 | 0.926089 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0009460 | SBH | 3.388001 | 50.553932 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0009070 | RBH | 0.384196 | 0.0 | 0.297361 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0009570 | SBH | 0.108970 | 0.594118 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G009390 | SBH | 0.000000 | 0.000000 | 0.284200 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0009360 | SBH | 0.0 | 1.435245 | 1.127660 |
