Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_Ung0004160 | OGI:99012690 | 1/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | ChrUN-Ctg48:95128-107776 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atattgaaataccaatccaatgatattattttcagcaaataaaattcgattttcattacactacctgttagtcaaatgtttttaaagttaaatctttaaatacgtgcgtgtcttgcattatggagtatataacaaataatgttcagcgaggattgatgctaggtacaacaccgctgaggaggttactgccggagacatcggatgatgacatgttgtagtgatggtgatcatcatttccaaccccagatgacgatgaaaccatcatcctggatcccgacgatggggtggctgtgttgctaggttccaaggatagtgaggacatgctcccggtgtccggtgtcatttgccatatcttctccagctccctcatcacctccaccatggacggccttgcgtccgtctcgtctcggcagcatctcagtgccagtgcagcaaacttctccacgcattctgctgggtacgatcccatccggctgtcaaccactgacaatatcatcccactctgattggccgcaacaacctacacgcacaaacatttatatatgtaattagtttcagggcatcaaatcaatttactacttctagtgcatactccctccgtcctataaaaaacgaatctagtaccaaccctcaaccaaacttttcactttagactactatttcttgcctttttgttttattttggaccctgttctcatctagctctcctcctatatctttcttctcatagagctagagcaactaatggtagcatgccttcaatctctccaccacatgcactgttgacctctccaccactcgcctatagcagaccctaacatagcggagttggagaagaaacataggtgtccaagatgaaaacaaaaggaaaagaaagatgatctaaagtgaaaagattggttaaggggtagcccaaattgaaacgtaggtaaaactaggtggcccgttatgcaattcactctaaattaagcatattgcacttccaagaaatagccaaatattgtgaaacggagagagcataacatttggccggccatgtcttcggccgacccggcaaagaaaaaaaaaagaaacagagggagcacttcagtctctttcatgtgcaccgcatgtgattttccaatgaaatataagcaaaattgtatgcaaggaagcatgaaatctatacctctctaactatatttcttccatgagaaataggttgcatccctgtcagcagttccagaaaaacaacaccaaggctgtacacgtcacttttgtctgtcagcttatgagtaaggaaatactccggatcaagataaccctgcgattgtaaagaaaggaatatataccatcaacaccattgcagaacactgtgctttaaacaatttattattagctggaaacttaaaacaaggcaaaatagttgcttttgcttgtgctaatccttatcaattggtaatagtaagaaatttcgctcaagaatcccttaattaatcaagctttgcaatgacatttaacttatagttctctttccattaatcaaattaacctaagttgaacaagtttctggtcacattcaccatatgcggttgcacacaacaccgggatcagacatcagaatatgaactgaagtaaaaactgataaaagtgctggcaaatgtggcagacttctgctcaactagttgctcacagagcatgtacaaacagatggcatagctactcaccggggtaccctttacaacagttgacacatgaccaggagcaatcccctctgattctggctctggggcaagccgagagagaccaaaatcagcaacttttgcgacaaactttgagtccagtaaaatattgcttgctttgatgtcacggtgaaatattggagggtctgcttctgtgtgtaaatagaggatgcctcgcgacgaccccagcgcaattcgtaacctcgtgggaaaatttaggggctcttttgatcgagctgctacatgagacaattgttagggcaactaggtacacagaaataacagcaacataacttcagaagtaacgatatatagcactgccatggagcttagcacaagatgctaatattcttctactagtaattaagaacgtgctagctaacaaagaaactgcgggtttatgatatttttatctgttgacttctgtttaatgaatatttagaattttatgaagagcagctttgtcagtaggtacagaaataaagttctaacctgaaagatgatcacgtagagtaccattaggcataaactcatataccagcatctgcaatacatgcttaacagtatgagtttatatcataattaatgttgaaccaaatgtgaggtactatctattcacaaccaactccgcaacagaagttgataggcagctgttcagtttctaccgttaaaattggtcaaatatgaactttcaaaaataatatactagccaacaaaaataatgccctgaactgctctaccattttccagcacacctatctgaaataggctgaactatgttctgtttggctttctcccaaagccaggtaacgaaaagttacctgttctccaaaataaaatctgatagcggctgagaacatgtgcatgcatatttatgtacttcaacgcagcgaatgtatttcaatgaattttgatatcagccttttataatccatttgaaaacaagaaagaacttgaatatttcaacgttcgacaaaactaatgccctggacttctattgaaaaaaaaagtaccaggaacaacctgctcatcttcttcatcacaataaccaagcaatgaaacaaggttccggtgatgcagcctggacagcaattctatctctgtgaagaactcctttgaaccctgaagagatccctgctgcgcacgttttattgctactattgttccatcagagagaatacctctgtacactttcccataccctccttgaccaattagtgctgagtcactaaagtcgtttgtaccatgtgacagttcttgaaaactgaagtcttttacaccatcaatcttcattggaattctttttgctgcaaatgcgataaaaaaatgacatattgaagattgaacagaagataactgataaaatatggaaaacataacaataaaaaaagaaactgtttcattgaagatagcggaaatggagggtttaccagagcgtctttttgaagaagaatatcttgaacgtcttctcagtataatgagagtaatgagggatgaaagaaatgctgctgcagcaaacgctgccatgacaataccaacaatggcacctgtacttaggctggactttgcacgatctggaaatactggatagcataagaaaatataagattactctcttgaaaaattgttaacaattatggaattaaacttgaactgcatggtactgtaactgaatcattagactcactatatcttgaccatacacaagtgctttttgtttagtagtaaatgtgcacagtgtatttttcctgtagtgtaggactgtaaggtgttttctgttaattcatctctagtatatccagaaaccacccatgcatgcttcttgttaagtagtatatgtgcagagtgtattccctgtagtataggggctttctttctgtaaagccatctcttgtatatccagggatccagcccctatgggtacattgaaacacaagttacaagtaattgaaacttctggatgatggaagaaatcaagaaatcaatcccagctacaggcaacaaccagcaagtgtggcggtgtggcctggcatgtcgtgatgcaagagtataccaccttctgatgcagtgatgcttacatcttactcccctgattccaaatgtaagatgttataggacttagaggcacttttcaatgtataatagttcctcttattccaaattcctcttatgctaattaagttctaccactcatgtacaaatgaggtatcattttaaatgtataatagttgcagggcaacaaggtcatttgaacagctttcttaattcatgtcaaccactctaaaactacctgactttggaaacagagggttgatacaaattattagggaatagggtatctgacacatcagtaagcatctactattaatggggacaaatgtcctcctcaagctatgtgtaaatggtgaatttggtttctctacattataaggtccaaatcagccatcctagtctgaaaacttactattcagtttacctcatcccttatatcgcccactgtcccaatggcatctggaccaggagcaaccttgtcattaggagtttgggacaatgagaaattttgtaaactttttgtggcatataagaaataaaactttcttttagatggatggataaaaaagaaagtaaaagaattgtcatgattcaccactcctttgggtggtccttcaggatttgtatgagaacctcgttgaaatgtgaatactaaaccaaatgtacaatgatatgggaaatcctgaaatgccactcattgactctctgaattgaattttgtgagtccctaaacttagattagctaggcagggtattaaatttcattggttgttcctgttaagttctgactagacattacacagtggaaatagtgcacccattacaaccgacatcatttttcataacttggttacttagatcaaaccaactgttttcacatacttattctcacagttactggtcatttgcatgttaactaccatagacatcctaatcctggtgagatccagaactatacttgaaatcaaatattgaatatttaaaacccctacaaatcagataaatgccaatacaagaataagaaggaaatgtatagagtcaatatagcatacaattgttataccaccctggattgaagttgaggagctcatagggtccgaatatatcagagtctggaatcagccagcctgtgaacattcctctcagtcttaacacctcgctcttattaaaataagcagtgttatttggaaacagtttcagattcatcttcacccgtgggccttcttcccacataaattgagaaacttctaattggtaagaagacaatgaaagtccagatgacaagtactgttgaaactgtccttcatatggaacaaaatcccaaaatccaggactctttagccggtaatcaacataaagtggaatagcacatatacatcgtattggtgacatcagtatgttttcaaacggaaggtcagtagagcatggcggacaaactgtggcattacttgcagaaccgtcaggcacaataactggcactgattgacagtactgagtaatgttcagttgatttggagatgtgcagatggggtttccagataacctatacatgagatgttaaaaaaatataaggtactagaaatatatctgaatgatatcaaaactccaacagcaaatgcatacatgctatcattttcttatgtgacttacatgttctgtttcatatcaaccttggccaaagtatccattagtttatttagaaagagcaaagttgcagagtacatcacaataccatcaatacaaaaaaaatcctttaattatcacatcagtcatgtccccaatgttactactatgttgattcttttctcccagactttcacctcaccaaattgcaacaagtgtattcaaattttgataataaaggtttagttggtcattcatattttattgtttcgggtggaacaccaaccaatgatcaccagatttgaaataaatatagatgagaagtggacttctgatttgcttaataagcatttgaattagtgcgaccatgctatcccaaggagcatttgcacgtctctatcaaatcacctattgagttttcttaagacttctccagcatgcatttgctacttcaccaggttaccgatcaaccttatttttctgactcacatagcaggatggacatttctcctccatgaaagaagacttgagaaagccattctcggttcttctgatagatggtttaaagcactagtaacaggcccatgcattgcaacagcccataccacttgaaatgggctggcagtttctttaccagtttggcctttttttcctcacgctgtgcacgtgcggtgggaggaagggacggaaggaggacaagtctgcttttacagtagtagataaaagcttccccacagctgaacaccatgttaaccctattgcatgtatgactttgtaaattgtaattgtcacaacgggcataactctctttaaagagtagcacattaatctttacccactccatagcatcgcctccatcttcaaccatgttaacattaactaaaataactccagttgagcattacgtcaaggcttaaaattacacctattcatttatcagttcgcatcacttttctatgatactggcttagaagggtcttataatacctacaggctcgtgcaactatccaatttcacaatcctaaagagtcatggcattagtaaagatattcacaacgaaaaccagggagattattcctttgttgcattcatttagttatacagatcatttatccaataagctaaggtttgtggttacaaggtagtctacttttaagttcccaaatacaaacaagaatagtcttcagttgtgctttccaaacagtatgaagaaggtaaactacaattAAaaaaaaaaagataggccttagatcagggccctttgtttcctctactaaacaaagatcatcagaccaatctctgactgccagcatagcatatttccaataatgaaattaatggatttggtactttgcattttaattaacaaggaaactaatgaaatagaagtacatacaggatggtaacattggcaggtggtgaaagaggatttgatagattggttagagaattgttctggaaatccctacaaaatattgacagagaattagattatcaattaactaattccagagaaagtgaaaagaagggtagattatgcatggtcttacaatataagacttctatttccactgaaatcaatattctgccagacatctgatggaacagaaccatccaaattgttattgtccaatgacctgagcaaagaaggtacaatatcacgcagctattgtttaagacagtaagatgaaaccaagttttacctgttgggtgtcatatcagtttggctaatattatgcataattatcataatattgtaatcgtcactactgaaaagttatgaagtaaaaaagtgctagtcttttctcccctgtaaagttattcccttttactctagagatctatcctattattctgcttctaccaatggtactcatatacctattgtactcaccgaacttgaaatagaataaagaaagatatactatcatacttacagtctttgtagattgggaaggccagagaaacttccaggaattgatccatttagaagattgtgggaaagatctctgcacaaattgtacgagcatgcatataaatgatagcttgtttgccaaatacttagtaaaatagaataaacaaaaatgacaagttgttagtaagggctctatttttatacatcgtggttatgttgcttgctggtcggccagatggtattgaaccccttaactgattccaactaagatccctgaacacaaataagacaaggatcaaagctgccacacatgatataatttttgctaactacgaatatggtaattttctgttcccaaaaaggtgaagttgcagtgttggaattcgacacatacagatagccaagttggggtattccactgacatcaggaacaggtccttccaagctgcagttcctcaaactcctgatgaagatcatatccaatagattagtctctaactttcataattacttcctatcttaatttcattgaatgacctccTttggtcattccggcaaaaaaaactttcataattaccgagagagtagaagtctgaattaaacctgtattcttgaaatgcaactttaccacttgatttgcaaagcattcaaaatgcaacctttctaagatgccagccatttgtgaacaagggaagctatttttggatgtgtctatcgagcaggttcccatggataattataatatcaagtaatgatagtgacttggatgcatttctaaaataagtaaaaacatgctaacatggtcatacttttgcacagcagagctggcctttgtgtagattgaaatggcaaaaaaaaaaacatatacttaaacacctttctactgccataatatgcacactgatacaggtttgcttctgcaaatatgttttgttatgaataagccaggtcaaccaatgttagccaaaccattacctaaaaatattcaagagaaaaaaaaaggcgaatatagggaatgatctaatatcaaataaatagaaggggtgagacccggctagcccaccaccttgtggagctagccggaagacccctgggcggttctcctaaaaatattcaagagaccagacaatgcgtaaacatccaagattgacatcaaagttcatctcagcactatgctcagaatgtggaattgcagacataggtaaagcgtactttcagaagtatagtaatttctcttagataatagaagatttattgaactcggtcaattacatgatacaattacactgagaacactcagcctctgcatgaccaggatccacacagccaagaagtaactacactgagaggtggaattgcagatagaggtaagaaaatacttacagtttcagaagtgtggtgatattgccataagatgaaggaattgaggttcctgagaaattattgttgtcaagctggctgaaattattttgaacagatattattagagagtgctgtatatgtgtgtaattctaatatcagagactactctttaaaagaaagtgaagaaaacgattgaataaaatcacaatggtcaagagacacaccagtagctacttttcagtaaatgagagcagcacagcgaagagccgaaagactctttctctaagctgctaaatttctagttaaattttagtaaagcaacacatataggcaaaggtctgcttgtaaacttcatgcaataacaagacacaatctagttcttggttaaagactgacattgaacccaaccaaagtaaccaaaagaaagaaagaaagaaagagctatcgcaacacagaagtttacgtacatgataagtagttttggtaacttcgataactctggaggaagatagcccgacaagttattgttatccaacaatctgtaaattaattacattgtaagtagagtttaaataaagaataccgatatggtagacacagttgtcagaaacttacaagtgaacaagtgaaggtaatctggatagttcaggtggaatttgaccacttaatgaattgttgttcatatgactggatgaaaattggaaaactattagggtaaggataataattccctgatgcttggcatagatgtaaaaccagatgctactcacaagtgctttgttttgttcagattagcaaatgatttaggtatgggtccagatatgtagttctggtcgatctgaatcctatccagattaggaaggaaaccaatctcctctggtagagaaccagtaagctggtttccatttaagagcctgcaaaaataggatgggcacatccgcacatacttacctataagtgacaagaaaacacagattccattccagataacagaggatacaacaacaatcacacctcacctaccaacaatttatctcaaagaaataattgttttcaaaaaatatatatattatgaaggatatgttacaatggaaacatatatattcagtcaattacagctgtatcataaaaaaataatctgaacaaacaactcatgaaaaatgctaacatcaccatccaaccagaaggacatgaagatactgattcagttaaactacagttttatagcaaacaaaactaagttgaactagaagccccagaaagaagatacgctcaattctaaccaaaaagatgtgaaggaaacccgtattggtgaaattgaagtaatacgggtttcaacttacagtaatttcagagaagtgatgttgccaacctccttaggtatgctgccactgatgttattccacataaaatcccttcagtggaaagaacaaaaagaaaaaaaaaagttagcgcccttgtgagtgggcatccaaccacctaaaagctaacccattaacaaatcaatgatccagttacttgtccaacttacattatttgcatgtgagatagccgaccaagctcagcagctaaagatccagataaattcaattttagaagttgcctataatcacataaatgcatcacggcaattagatccacttgggAAaaaaaaaaagagagatgggatctttagagagaaaattcgagcaaagtttatctttttgtactgcactaattgccccatcaaggcaatcaatattcaaatagcatggcattttttttcacaaggcaaaaaaataagaacataaagaacacagtaacattattctacttctaaaaaggagaagctatcagcagcagtggaaagtatctgattacatctcgaaaaaatgcagaatatatgaaggcggaatgtgatctattatgttatgacattcaacaaattcatcaccaaaagcacgcctaacataagctaaacaccaaaagcaaaccataagataagcaacggaaaaatgtggtataataaggacacagttaacaaggagatcacttatgctcatacaattctaatacatggagatatccatcacttgctgtttcattgtaacagtgaacataagaccaatttcccatgcacggatctccacggttccagttgtttagacgtccttgcggatctatcagattgcctttgatagctttcagagcatcaactgcagaccaaatgtaccgatgttacacctagttagcttcataatgcaaggtaaaaatcaataacactcaataacgtaaccataacaactaatatatttagaaccatggcttgtgctctcctatgcgtctcaagtgagcaggccacgcttatgacacaaagattgaaagagatatgtgcatgtagactgtagagatcagtctcaataagaggagtggaggtaaagtatggctagaatgatggatattaccttcccaaggtgcagtgatctgtgcttctgttctttgcaccaagtagaacatgaagataatggagcaaagatagaagagtcgagactgccgcatgatgctactacacagaaaatttgctcagtttggcaggatattgagaattcaccgatgtagtttccctctgatagcataatccagtccctgaaatggaacaaaggggcaacggttacttgtccagacccacaagtgcacagaggaccatataaagtcagggatgcaccagattactgcttaaattttgagcaaagtaaagttgtaaaaaaaaagttaagcataaattttcaccagtgtagctaggaatttttgaaaactcagaggagcatcttttttttcttattatttttaaacagcagctgagaagcgactgccgaccaccaacaccaataaaacataaatttcaaccttttcaattagagatcaataaagaagagatgttatgagatgaaagctaaaatttcaacgaagtacgtgtttgctgatgaatcccttgcaatcatgctgcgatagcatatcataccatgaatgaagggaagaattgaagaaagcctgctgtactatcttgtttattatggaaaaagaacatgtgtgcataacgtcgattgaaacaccgatgcagggaaggaatcgatagatacaacaagcataccactcagcagaaaattaaagagagaaagaaggatgaactcaccagctggtaggaggcagcagaaagaaagaatcaatcgatccgccacaccaatggaggattgtagtagaaaaggacaaacctgagtagtattagtcaagcagagataataatcaaccgaatattaactatataatggggattaagttgggcttggccgcttgggtgtgaaaatgagcgagcaaagtacagtataatattataaataaagccatgaagaggtaggaaagggatagggggaagtagtacactacatcgaactgaatcgattgacctcttccagtttcctacctgctgccacaacgcaaactcttaaatctcaaatcccaaatcctgaataatttctgcttttcgccacggcccacgggtgacacgagcagtgatgacaagaacattgaaaaggtgatggaaaatgtcgtagtaaattcggggtttggtgatggtggacttggcaacgcccctctccatccatccatccatcaaccaatctgtctccctctgacctcagcagcgcacgcaaattcattgaattcgacttcgccaccccacctatctatacggaaatatctatcgatctatatcaacaatattaaaggcagacgacttccagattggattcttggaccaagtaaaacaacagcaagaattgaggcagacggaggaggaagaagaagaaagggtcaagcctttctgtagccaaggaggccatcctcttcctgtagccaccagccgccatcgccatgcttcgcaagctgccgcaaccatatcagatttctccccgcgctgtagcgtcgccgcgacgcttcc
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| CDS seq | atgcggcagtctcgactcttctatctttgctccattatcttcatgttctacttggtgcaaagaacagaagcacagatcactgcaccttgggaagttgatgctctgaaagctatcaaaggcaatctgatagatccgcaaggacgtctaaacaactggaaccgtggagatccgtgcatgggaaattggtcttatgttcactgttacaatgaaacagcaagtgatggatatctccatgtattagaattgcaacttctaaaattgaatttatctggatctttagctgctgagcttggtcggctatctcacatgcaaataatggattttatgtggaataacatcagtggcagcatacctaaggaggttggcaacatcacttctctgaaattactgctcttaaatggaaaccagcttactggttctctaccagaggagattggtttccttcctaatctggataggattcagatcgaccagaactacatatctggacccatacctaaatcatttgctaatctgaacaaaacaaagcactttcatatgaacaacaattcattaagtggtcaaattccacctgaactatccagattaccttcacttgttcacttattgttggataacaataacttgtcgggctatcttcctccagagttatcgaagttaccaaaactacttatcatgagtttgaggaactgcagcttggaaggacctgttcctgatgtcagtggaataccccaacttggctatctggatcttagttggaatcagttaaggggttcaataccatctggccgaccagcaagcaacataaccacgatagatctttcccacaatcttctaaatggatcaattcctggaagtttctctggccttcccaatctacaaagactgtcattggacaataacaatttggatggttctgttccatcagatgtctggcagaatattgatttcagtggaaatagaagtcttatattggatttccagaacaattctctaaccaatctatcaaatcctctttcaccacctgccaatgttaccatcctgttatctggaaaccccatctgcacatctccaaatcaactgaacattactcagtactgtcaatcagtgccagttattgtgcctgacggttctgcaagtaatgccacagtttgtccgccatgctctactgaccttccgtttgaaaacatactgatgtcaccaatacgatgtatatgtgctattccactttatgttgattaccggctaaagagtcctggattttgggattttgttccatatgaaggacagtttcaacagtacttgtcatctggactttcattgtcttcttaccaattagaagtttctcaatttatgtgggaagaaggcccacgggtgaagatgaatctgaaactgtttccaaataacactgcttattttaataagagcgaggtgttaagactgagaggaatgttcacaggctggctgattccagactctgatatattcggaccctatgagctcctcaacttcaatccagggtggtataacaatttatttccagatcgtgcaaagtccagcctaagtacaggtgccattgttggtattgtcatggcagcgtttgctgcagcagcatttctttcatccctcattactctcattatactgagaagacgttcaagatattcttcttcaaaaagacgctctgcaaaaagaattccaatgaagattgatggtgtaaaagacttcagttttcaagaactgtcacatggtacaaacgactttagtgactcagcactaattggtcaaggagggtatgggaaagtgtacagaggtattctctctgatggaacaatagtagcaataaaacgtgcgcagcagggatctcttcagggttcaaaggagttcttcacagagatagaattgctgtccaggctgcatcaccggaaccttgtttcattgcttggttattgtgatgaagaagatgagcagatgctggtatatgagtttatgcctaatggtactctacgtgatcatctttcagctcgatcaaaagagcccctaaattttcccacgaggttacgaattgcgctggggtcgtcgcgaggcatcctctatttacacacagaagcagaccctccaatatttcaccgtgacatcaaagcaagcaatattttactggactcaaagtttgtcgcaaaagttgctgattttggtctctctcggcttgccccagagccagaatcagaggggattgctcctggtcatgtgtcaactgttgtaaagggtaccccgggttatcttgatccggagtatttccttactcataagctgacagacaaaagtgacgtgtacagccttggtgttgtttttctggaactgctgacagggatgcaacctatttctcatggaagaaatatagttagagaggttgttgcggccaatcagagtgggatgatattgtcagtggttgacagccggatgggatcgtacccagcagaatgcgtggagaagtttgctgcactggcactgagatgctgccgagacgagacggacgcaaggccgtccatggtggaggtgatgagggagctggagaagatatggcaaatgacaccggacaccgggagcatgtcctcactatccttggaacctagcaacacagccaccccatcgtcgggatccaggatgatggtttcatcgtcatctggggttggaaatgatgatcaccatcactacaacatgtcatcatccgatgtctccggcagtaacctcctcagcggtgttgtacctagcatcaatcctcgctga
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| Protein seq | MRQSRLFYLCSIIFMFYLVQRTEAQITAPWEVDALKAIKGNLIDPQGRLNNWNRGDPCMGNWSYVHCYNETASDGYLHVLELQLLKLNLSGSLAAELGRLSHMQIMDFMWNNISGSIPKEVGNITSLKLLLLNGNQLTGSLPEEIGFLPNLDRIQIDQNYISGPIPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSKLPKLLIMSLRNCSLEGPVPDVSGIPQLGYLDLSWNQLRGSIPSGRPASNITTIDLSHNLLNGSIPGSFSGLPNLQRLSLDNNNLDGSVPSDVWQNIDFSGNRSLILDFQNNSLTNLSNPLSPPANVTILLSGNPICTSPNQLNITQYCQSVPVIVPDGSASNATVCPPCSTDLPFENILMSPIRCICAIPLYVDYRLKSPGFWDFVPYEGQFQQYLSSGLSLSSYQLEVSQFMWEEGPRVKMNLKLFPNNTAYFNKSEVLRLRGMFTGWLIPDSDIFGPYELLNFNPGWYNNLFPDRAKSSLSTGAIVGIVMAAFAAAAFLSSLITLIILRRRSRYSSSKRRSAKRIPMKIDGVKDFSFQELSHGTNDFSDSALIGQGGYGKVYRGILSDGTIVAIKRAQQGSLQGSKEFFTEIELLSRLHHRNLVSLLGYCDEEDEQMLVYEFMPNGTLRDHLSARSKEPLNFPTRLRIALGSSRGILYLHTEADPPIFHRDIKASNILLDSKFVAKVADFGLSRLAPEPESEGIAPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGRNIVREVVAANQSGMILSVVDSRMGSYPAECVEKFAALALRCCRDETDARPSMVEVMRELEKIWQMTPDTGSMSSLSLEPSNTATPSSGSRMMVSSSSGVGNDDHHHYNMSSSDVSGSNLLSGVVPSINPR |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [UniProtKB/Swiss-Prot:C0LGD7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0004160 | OsLiXu_Ung0004160.02 | ChrUN-Ctg48 | 95260 | 106965 | - | NAM | ||
| CDS seq | atgcggcagtctcgactcttctatctttgctccattatcttcatgttctacttggtgcaaagaacagaagcacagatcactgcaccttgggaagttgatgctctgaaagctatcaaaggcaatctgatagatccgcaaggacgtctaaacaactggaaccgtggagatccgtgcatgggaaattggtcttatgttcactgttacaatgaaacagcaagtgatggatatctccatgtattagaattgcaacttctaaaattgaatttatctggatctttagctgctgagcttggtcggctatctcacatgcaaataatggattttatgtggaataacatcagtggcagcatacctaaggaggttggcaacatcacttctctgaaattactgctcttaaatggaaaccagcttactggttctctaccagaggagattggtttccttcctaatctggataggattcagatcgaccagaactacatatctggacccatacctaaatcatttgctaatctgaacaaaacaaagcactttcatatgaacaacaattcattaagtggtcaaattccacctgaactatccagattaccttcacttgttcacttattgttggataacaataacttgtcgggctatcttcctccagagttatcgaagttaccaaaactacttatcatgagtttgaggaactgcagcttggaaggacctgttcctgatgtcagtggaataccccaacttggctatctggatcttagttggaatcagttaaggggttcaataccatctggccgaccagcaagcaacataaccacgatagatctttcccacaatcttctaaatggatcaattcctggaagtttctctggccttcccaatctacaaagactgtcattggacaataacaatttggatggttctgttccatcagatgtctggcagaatattgatttcagtggaaatagaagtcttatattggatttccagaacaattctctaaccaatctatcaaatcctctttcaccacctgccaatgttaccatcctgttatctggaaaccccatctgcacatctccaaatcaactgaacattactcagtactgtcaatcagtgccagttattgtgcctgacggttctgcaagtaatgccacagtttgtccgccatgctctactgaccttccgtttgaaaacatactgatgtcaccaatacgatgtatatgtgctattccactttatgttgattaccggctaaagagtcctggattttgggattttgttccatatgaaggacagtttcaacagtacttgtcatctggactttcattgtcttcttaccaattagaagtttctcaatttatgtgggaagaaggcccacgggtgaagatgaatctgaaactgtttccaaataacactgcttattttaataagagcgaggtgttaagactgagaggaatgttcacaggctggctgattccagactctgatatattcggaccctatgagctcctcaacttcaatccagggtggtataacaatttatttccagatcgtgcaaagtccagcctaagtacaggtgccattgttggtattgtcatggcagcgtttgctgcagcagcatttctttcatccctcattactctcattatactgagaagacgttcaagatattcttcttcaaaaagacgctctgcaaaaagaattccaatgaagattgatggtgtaaaagacttcagttttcaagaactgtcacatggtacaaacgactttagtgactcagcactaattggtcaaggagggtatgggaaagtgtacagaggtattctctctgatggaacaatagtagcaataaaacgtgcgcagcagggatctcttcagggttcaaaggagttcttcacagagatagaattgctgtccaggctgcatcaccggaaccttgtttcattgcttggttattgtgatgaagaagatgagcagatgctggtatatgagtttatgcctaatggtactctacgtgatcatctttcagctcgatcaaaagagcccctaaattttcccacgaggttacgaattgcgctggggtcgtcgcgaggcatcctctatttacacacagaagcagaccctccaatatttcaccgtgacatcaaagcaagcaatattttactggactcaaagtttgtcgcaaaagttgctgattttggtctctctcggcttgccccagagccagaatcagaggggattgctcctggtcatgtgtcaactgttgtaaagggtaccccgggttatcttgatccggagtatttccttactcataagctgacagacaaaagtgacgtgtacagccttggtgttgtttttctggaactgctgacagggatgcaacctatttctcatggaagaaatatagttagagaggttgttgcggccaatcagagtgggatgatattgtcagtggttgacagccggatgggatcgtacccagcagaatgcgtggagaagtttgctgcactggcactgagatgctgccgagacgagacggacgcaaggccgtccatggtggaggtgatgagggagctggagaagatatggcaaatgacaccggacaccgggagcatgtcctcactatccttggaacctagcaacacagccaccccatcgtcgggatccaggatgatggtttcatcgtcatctggggttggaaatgatgatcaccatcactacaacatgtcatcatccgatgtctccggcagtaacctcctcagcggtgttgtacctagcatcaatcctcgctga
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| Protein seq | MRQSRLFYLCSIIFMFYLVQRTEAQITAPWEVDALKAIKGNLIDPQGRLNNWNRGDPCMGNWSYVHCYNETASDGYLHVLELQLLKLNLSGSLAAELGRLSHMQIMDFMWNNISGSIPKEVGNITSLKLLLLNGNQLTGSLPEEIGFLPNLDRIQIDQNYISGPIPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSKLPKLLIMSLRNCSLEGPVPDVSGIPQLGYLDLSWNQLRGSIPSGRPASNITTIDLSHNLLNGSIPGSFSGLPNLQRLSLDNNNLDGSVPSDVWQNIDFSGNRSLILDFQNNSLTNLSNPLSPPANVTILLSGNPICTSPNQLNITQYCQSVPVIVPDGSASNATVCPPCSTDLPFENILMSPIRCICAIPLYVDYRLKSPGFWDFVPYEGQFQQYLSSGLSLSSYQLEVSQFMWEEGPRVKMNLKLFPNNTAYFNKSEVLRLRGMFTGWLIPDSDIFGPYELLNFNPGWYNNLFPDRAKSSLSTGAIVGIVMAAFAAAAFLSSLITLIILRRRSRYSSSKRRSAKRIPMKIDGVKDFSFQELSHGTNDFSDSALIGQGGYGKVYRGILSDGTIVAIKRAQQGSLQGSKEFFTEIELLSRLHHRNLVSLLGYCDEEDEQMLVYEFMPNGTLRDHLSARSKEPLNFPTRLRIALGSSRGILYLHTEADPPIFHRDIKASNILLDSKFVAKVADFGLSRLAPEPESEGIAPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGRNIVREVVAANQSGMILSVVDSRMGSYPAECVEKFAALALRCCRDETDARPSMVEVMRELEKIWQMTPDTGSMSSLSLEPSNTATPSSGSRMMVSSSSGVGNDDHHHYNMSSSDVSGSNLLSGVVPSINPR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0004160 | OsLiXu_Ung0004160.01 | ChrUN-Ctg48 | 95260 | 107776 | - | NAM | ||
| CDS seq | atgcggcagtctcgactcttctatctttgctccattatcttcatgttctacttggtgcaaagaacagaagcacagatcactgcaccttgggaagttgatgctctgaaagctatcaaaggcaatctgatagatccgcaaggacgtctaaacaactggaaccgtggagatccgtgcatgggaaattggtcttatgttcactgttacaatgaaacagcaagtgatggatatctccatgtattagaattgcaacttctaaaattgaatttatctggatctttagctgctgagcttggtcggctatctcacatgcaaataatggattttatgtggaataacatcagtggcagcatacctaaggaggttggcaacatcacttctctgaaattactgctcttaaatggaaaccagcttactggttctctaccagaggagattggtttccttcctaatctggataggattcagatcgaccagaactacatatctggacccatacctaaatcatttgctaatctgaacaaaacaaagcactttcatatgaacaacaattcattaagtggtcaaattccacctgaactatccagattaccttcacttgttcacttattgttggataacaataacttgtcgggctatcttcctccagagttatcgaagttaccaaaactacttatcatgagtttgaggaactgcagcttggaaggacctgttcctgatgtcagtggaataccccaacttggctatctggatcttagttggaatcagttaaggggttcaataccatctggccgaccagcaagcaacataaccacgatagatctttcccacaatcttctaaatggatcaattcctggaagtttctctggccttcccaatctacaaagactgtcattggacaataacaatttggatggttctgttccatcagatgtctggcagaatattgatttcagtggaaatagaagtcttatattggatttccagaacaattctctaaccaatctatcaaatcctctttcaccacctgccaatgttaccatcctgttatctggaaaccccatctgcacatctccaaatcaactgaacattactcagtactgtcaatcagtgccagttattgtgcctgacggttctgcaatatttccagatcgtgcaaagtccagcctaagtacaggtgccattgttggtattgtcatggcagcgtttgctgcagcagcatttctttcatccctcattactctcattatactgagaagacgttcaagatattcttcttcaaaaagacgctctgcaaaaagaattccaatgaagattgatggtgtaaaagacttcagttttcaagaactgtcacatggtacaaacgactttagtgactcagcactaattggtcaaggagggtatgggaaagtgtacagaggtattctctctgatggaacaatagtagcaataaaacgtgcgcagcagggatctcttcagggttcaaaggagttcttcacagagatagaattgctgtccaggctgcatcaccggaaccttgtttcattgcttggttattgtgatgaagaagatgagcagatgctggtatatgagtttatgcctaatggtactctacgtgatcatctttcagctcgatcaaaagagcccctaaattttcccacgaggttacgaattgcgctggggtcgtcgcgaggcatcctctatttacacacagaagcagaccctccaatatttcaccgtgacatcaaagcaagcaatattttactggactcaaagtttgtcgcaaaagttgctgattttggtctctctcggcttgccccagagccagaatcagaggggattgctcctggtcatgtgtcaactgttgtaaagggtaccccgggttatcttgatccggagtatttccttactcataagctgacagacaaaagtgacgtgtacagccttggtgttgtttttctggaactgctgacagggatgcaacctatttctcatggaagaaatatagttagagaggttgttgcggccaatcagagtgggatgatattgtcagtggttgacagccggatgggatcgtacccagcagaatgcgtggagaagtttgctgcactggcactgagatgctgccgagacgagacggacgcaaggccgtccatggtggaggtgatgagggagctggagaagatatggcaaatgacaccggacaccgggagcatgtcctcactatccttggaacctagcaacacagccaccccatcgtcgggatccaggatgatggtttcatcgtcatctggggttggaaatgatgatcaccatcactacaacatgtcatcatccgatgtctccggcagtaacctcctcagcggtgttgtacctagcatcaatcctcgctga
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| Protein seq | MRQSRLFYLCSIIFMFYLVQRTEAQITAPWEVDALKAIKGNLIDPQGRLNNWNRGDPCMGNWSYVHCYNETASDGYLHVLELQLLKLNLSGSLAAELGRLSHMQIMDFMWNNISGSIPKEVGNITSLKLLLLNGNQLTGSLPEEIGFLPNLDRIQIDQNYISGPIPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSKLPKLLIMSLRNCSLEGPVPDVSGIPQLGYLDLSWNQLRGSIPSGRPASNITTIDLSHNLLNGSIPGSFSGLPNLQRLSLDNNNLDGSVPSDVWQNIDFSGNRSLILDFQNNSLTNLSNPLSPPANVTILLSGNPICTSPNQLNITQYCQSVPVIVPDGSAIFPDRAKSSLSTGAIVGIVMAAFAAAAFLSSLITLIILRRRSRYSSSKRRSAKRIPMKIDGVKDFSFQELSHGTNDFSDSALIGQGGYGKVYRGILSDGTIVAIKRAQQGSLQGSKEFFTEIELLSRLHHRNLVSLLGYCDEEDEQMLVYEFMPNGTLRDHLSARSKEPLNFPTRLRIALGSSRGILYLHTEADPPIFHRDIKASNILLDSKFVAKVADFGLSRLAPEPESEGIAPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGRNIVREVVAANQSGMILSVVDSRMGSYPAECVEKFAALALRCCRDETDARPSMVEVMRELEKIWQMTPDTGSMSSLSLEPSNTATPSSGSRMMVSSSSGVGNDDHHHYNMSSSDVSGSNLLSGVVPSINPR
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_Ung0004160 | OsLiXu_Ung0004160.03 | ChrUN-Ctg48 | 95128 | 107097 | - | IsoSeq | ||
| CDS seq | atgctatcagagggaaactacatcggtgaattctcaatatcctgccaaactgagcaaattttctgtgtagtagcatcatgcggcagtctcgactcttctatctttgctccattatcttcatgttctacttggtgcaaagaacagaagcacagatcactgcaccttgggaagttgatg |
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| Protein seq | MLSEGNYIGEFSISCQTEQIFCVVASCGSLDSSIFAPLSSCSTWCKEQKHRSLHLGKLM |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | ChrUN-Ctg48 | 102901 | 104268 | - | OsLiXu_Ung0004160.03 | OsLiXu_Ung0004160.03,OsLiXu_Ung0004160.01,OsLiXu_Ung0004160.02 | All |
| A5 | ChrUN-Ctg48 | 98431 | 100349 | - | OsLiXu_Ung0004160.03,OsLiXu_Ung0004160.02 | OsLiXu_Ung0004160.03,OsLiXu_Ung0004160.01,OsLiXu_Ung0004160.02 | All |
| AF | ChrUN-Ctg48 | 106425 | 107097 | - | OsLiXu_Ung0004160.02 | OsLiXu_Ung0004160.03,OsLiXu_Ung0004160.02 | All |
| AF | ChrUN-Ctg48 | 106425 | 107776 | - | OsLiXu_Ung0004160.02 | OsLiXu_Ung0004160.02,OsLiXu_Ung0004160.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.845370 | 0.0 | 0.660283 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0960400 | SBH | 3.927451 | 3.956542 | 5.098091 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72990 | SBH | 1.823878 | 2.153770 | 1.091076 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0960400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0047810 | SBH | 1.578236 | 46.214420 | 9.998759 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0047300 | SBH | 0.542956 | 3.894142 | 4.234435 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0047800 | SBH | 3.777718 | 35.456352 | 18.058813 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0047180 | SBH | 0.954833 | 0.359982 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0046730 | SBH | 22.392342 | 27.390610 | 47.646648 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0694200 | SBH | 17.1602235 | 32.512539 | 13.5775745 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0046220 | SBH | 1.321945 | 1.059605 | 3.238455 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0695300 | SBH | 10.4540305 | 52.6730995 | 30.409257 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0046820 | SBH | 0.956030 | 0.862306 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0046660 | SBH | 1.308090 | 18.786926 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046990 | SBH | 28.270214 | 29.487116 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046980 | RBH | 0.000000 | 0.000000 | 0.892832 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0046730 | SBH | 1.913669 | 14.206080 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G047010 | SBH | 2.454068 | 2.858821 | 6.592878 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0046760 | SBH | 6.428812 | 58.697754 | 16.480141 |
