Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLima_01g0046820 | OGI:01124100 | 14/16 | LIMA | Os127564RS1 | Gramene(+IsoSeq) | Chr01:44068695-44081186 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gaaataccaatccaatgatattattttcagcaaataaaattcgattttcattacactacttgttagtcaaatgtttttaaagttaaatctttaaatacgtgcgtgtcttgcattatggagtatataacaaataatgttcagcgaggattgatgctaggtacaacaccgctgaggaggttactgccggagacatcggatgatgacatgttgtagtgatggtgatcatcatttccaaccccagatgacgatgaaaccatcatcctggatcccgacgatggggtggctgtgttgctaggttccaaggatagtgaggacatgctcccggtgtccggtgtcatttgccatatcttctccagctccctcatcacctccactatggacggccttgcgtccgtctcgtctcggcagcatctcagtgccagtgcagcaaacttctccacgcattctgctgggtacgatcccatccggctgtcaaccactgacaatatcatcccactctgattggccgcaacaacctacacgcacaaacatttatatatgtaattagtttcagggcatcaaatcaatttactacttctagtgcatactccctccgtcccataaaaaacgaatctagtactgaatgtgacatatcctagtacaacgaatatatatagtagtaataggactattcaacctcttcaagaattatgttaggagtatgatcccaaaacactacacacttgattcttgtagtttacataaataatactccctcagtccctaaatatttgacgcagttgatcttttttaacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattattttcctatcatttgattcattgttacatatactactactactcaagtttttgaataatattcacaaaagtttttgaataaaacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaatatttagggacggagggagtataaattaagtatattgcacattgggttacttatttttacctgtgtttcactttggaccaaccctcaaccaaacttttcactttagactactatttcttgcctttttgttttattttggaccctgttctcatctagctctcctcctatatctttcttctcatagagctagagcaactaatggtagcatgccttcaatctctccaccacatgcactgttgacctctccaccactcgcctatagcagaccctaacatagcggagttggagaagaaagataggtgtccaagatgaaaacaaaaggaaaagaaagatgatctaaagtgaaaagattggttaaggggtagcccaaattgaaacgtaggtaaaactaggtgccccgttatgcaattcactctaaattaagcatattgcacttccaagaaatagccaaatattgtgaaacggagagagcataacatttggccggccatgtcttcagccgacccggcaaagaaaaaaaaaagaaacagagggagcacttcagtctctttcatgtgcaccgcatgtgattttccaatgaaatataagcaaaattgtatgcaaggaagcatgaaatctatacctctctaactatatttcttccatgagaaataggttgcatccctgtcagcagttccagaaaaacaacaccaaggctgtacacgtcacttttgtctgtcagcttatgagtaaggaaatactccggatcaagataaccctgcgattgtaaagaaaggaatatataccatcaacaccattgcagaacactgtgctttaaacaatttattattagctggaaacttaaaacaaggcaaaatagttgcttttgcttgtgctaatccttatcaattggtaatagtaagaaatttcgctcaagaatcccttaattaatcaagctttgcaatgacatttaacttatagttctctttccattaatcaaattaacctaagttgaacaagtttctggtcacattcaccatatgcggttgcacacaacaccgggatcagacatcagaatatgaactgaagtaaaaactgataaaagtgctggcaaatgtggcagacttctgctcaactagttgctcacagagcatgtacaaacagatggcatagctactcaccggggtaccctttacaacagttgacacatgaccaggagcaatcccctctgattctggctctggggcaagccgagagagaccaaaatcagcaacttttgcgacaaactttgagtccagtaaaatattgcttgctttgatgtcacggtgaaatattggagggtctgcttctgtgtgtaaatagaggatgcctcgcgacgaccccagcgcaattcgtaacctcgtgggaaaatttaggggctcttttgatcgagctgctacatgagacaattgttagggcaactaggtacacagaaataacagcaacataacttcagaagtaacgatatatagcactgccatggagcttagcacaagatgctaatattcttctactagtaattaagaacgtgctagctaacaaagaaactgcgggtttatgatatttttatctgttgacttctgtttaatgaatatttaaaattttatgaagagcagctttgtcagtaggtacagaaataaagttctaacctgaaagatgatcacgtagagtaccattaggcataaactcatataccagcatctgcaatacatgcttaacagtatgagtttatatcataattaatgttgaaccaaatgtgaggtactatctattcacaaccaactccgcaacagaagttgataggcagctgttcagtttctaccgttaaaattggtcaaatatgaactttcaaaaataatatactagccaacaaaaataatgcactgaactgctctaccattttccagcacacctatctgaaataggctgaactatgttctgtttggctttctcccaaagccaggtaacgaaaagttacctgttctccaaaataaaatctgatagcggctgagaacatgtgcatgcatatttatgtacttcaacgcagcgaatgtatttcaatgaattttgatatcagccttttataatccatttgaaaacaagaaagaacttgaatatttcaacgttcgacaaaactaatgccctggacttctattgaaaaaaaaagtaccaggaacaacctgctcatcttcttcatcacaataaccaagcaatgaaacaaggttccggtgatgcagcctggacagcaattctatctctgtgaagaactccttcgaaccctgaagagatccctgctgcgcacgttttattgctactattgttccatcagagagaatacctctgtacactttcccataccctccttgaccaattagtgctgagtcactaaagtcgtttgtaccatgtgacagttcttgaaaactgaagtcttttacaccatcaatcttcattggaattctttttgctgcaaatgcgataaaaaaatgacatattgaagattgaacagaagataactgataaaatatggaaaacataacaataaaaaaaagaaactgtttcattgaagatagcggaaatggagggtttaccagagcgtctttttgaagaatatcttgaacgtcttctcagtataatgagagtaatgagggatgaaagaaatgctgctgcagcaaacgctgccacgacaataccaacaatggcacctgtacttaggctggactttgcacgatctggaaatactggatagcataagaaaatataagattactctcttgaaaaattgttaacaattatggaattaaacttgaactgcatggtactgtaactgaatcattagactcactatatcttgaccatacacaagtgctttttgtttagtagtaaatgtgcacagtgtatttttcctgtagtgtaggactgtaaggtgttttctgttaattcatctctagtatatccagaaaccacccatgcatgcttcttgttaagtagtatatgtgcagagtgtattccctgtagtataggggctttctttctgtaaagccatctcttgtatatccagggatccagcccctatgggtacattgaaacacaagttacaagtaattgaaacttctggatgatggaagaaatcaagaaatcaatcccagctacaggcaacaaccagcaagtgtggcggtgtggcctggcatgtcgtgatgcaagagtataccaccttctgatgcagtgatgcttacatcttactcccctgattccaaatgtaagatgttataggacttagaggcacttttcaatgtataatagttcctcttattccaaattcctcttatgctaattaagttctaccactcatgtacaaatgaggtatcattttaaatgtataatagttgcagggcaacaaggtcatttgaacagctttcttaattcatgtcaaccactctaaaacgacctgactttggaaacagagggttgatacaaattattagggaatagggtatctgacacatcagtaagcatctactattaatggggacaaatgtcctcctcaagctatgtgtaaatggtgaatttggtttctctacattataaggtccaaatcagccatcctagtctgaaaacttattattcagtttacctcatcccttatatcgcccactgtcccaatggcatctggaccaggagcaaccttgtcattaggagtttgggacaatgagaaattttgtaaactttttgtggcatataagaaataaaactttcttttagatggatggataaaaaagaaagtaaaagaattgtcatgattcaccactcctttgggtggtccttcaggatttgtatgagaacctcgttgaaatgtgaatactaaaccaaatgtacaatgatatgggaaatcctgaaatgccaatgaatgaatggaaattcattgactctctgaattgaattttgtgagtccctaaacttagattagctaggcagggtattaaatttcattggttgttcctgttaagttctgactagacattacacagtggaaatagtgcacccattacaaccgacatcatttttcataacttggttacttagatcaaaccaactgttttcacatacttattctcacagttactggtcatttgcatgttaactaccatagacatcctaatcctggtgagatccagaactatacttgaaatcaaatattgaatatttaaaacccctacaaatcagataaatgccaatacaagaataagaaggaaatgtatagagtcaatatagcatacaattgttataccaccctggattgaagttgaggagctcatagggcccgaatatatcagagtctggaatcagccagcctgtgaacattcctctcagtcttaacacctcgctcttattaaaataagcagtgttatttggaaacagtttcagattcatcttcacccgtgggccttcttcccacataaattgagaaacttctaattggtaagaagacaatgaaagtccagatgacaagtactgttgaaactgtccttcatatggaacaaaatcccaaaatccaggactctttagccggtaatcaacataaagtggaatagcacatatacatcgtattggtgacatcagtatgttttcaaacggaaggtcagtagagcatggcggacaaactgtggcattacttgcagaaccgtcaggcacaataactggcactgattgacagtactgagtaatgttcagttgatttggagatgtgcagatggggtttccagataacctatacatgagatgttaagaaaatataaggtactagaaatatatctgaatgatatcaaaactccaacagcaaatgcatacatgctatcattttcttatgtgacttacatgttctgtttcatatcaaccttggccaaagtatccattagtttatttagaaagagcaaagttgcagagtacatcacaataccatcaatacaaaaaaaatcctttaattatcacatcagtcatgtccccaatgttactactatgttgattcttttctcccagactttcacctcaccaaattgcaacaagtgtattcaaattttgataataaaggtttagttggtcattcatattttattgtttcgggtggaacaccaaccaatgatcaccagatttgaaataaatatagatgagaagtagacttctgatttgcttaataagcatttgaattagtgcgaccatgctatcccaaggagcatttgcacgtctctatcaaatcacctattgagttttcttaagacttctccagcatgcatttgctacttcaccaggttaccgatcaaccttatttttctgactctcacatagcaggatggacatttctcctccatgaaagaagacttgagaaagccattctcggttcttctgatagatggtttaaagcactagtaacaggcccatgcattgcaacagcccataccacttgaaatgggctggcagtttctttaccagtttggccattttttcctcacgctgtgcacgtgcggtgggaggaagggacggaaggaggacaagtctgcttttacagtagtagataaaagcttccccacagctgaacaccgtgttaaccctattgcatgtatgactttgtaaattgtaattgtcacagcgggcataactctctttaaagagtagcacattaatctttacccactccatagcatcgcctccatcttcaaccatgttaacattaactaaaataactccagttgagcattacgtcaaggcttgaaattacacctattcatttatcagttcgcatcacttttctatgatactggcttagaagggtcttataatacctacaggctcgtgcaactatccaatttcacaatcctaaagagtcatggcattagtaaagatattcacaacgaaaaccagggagatgattcctttgttgcattcatttagttatacagatcatttatccaataagctaaggtttgtggttacaaggtagtctacttttaagttcccaaatacaaacaagaatagtcttcagttgtgctttccaaacagtatgaagaaggtaaactacaattaaaaaaaaagataggccttagatcagggccctttgtttcctctactaaacaaagatcatcagaccaatctctgactgccagcatagcatatttccaataatgaaattaatggatttggtactttgcattttaattaacaaggaaactaatgaaatagaagtacatacaggatggtaacattggcaggtggtgaaagaggatttgatagattggttagagaattgttctggaaatccctacaaaatattgacagagaattagattatcaattaactaattccagagaaagtgaaaagaacggtagattatgcatggtcttacaatataagacttctatttccactgaaatcaatattccgccagacatctgatggaacagaaccatccaaattgttattgtccaatgacctgagcaaagaaggtacaatatcacgcagctattgtttaagacagaaagatgaaaccaagttttacctgttgggtgtcatatcagtttggctaatattatgcataattatcataatattgtaatcgtcactactgaaaagttatgaagtaaaaaagtgctagtcttttctcccctgtaaagttattcccttttactctagagatctatcctattattctgcttctaccaatgatactcatatacctattgtactcaccgaacttgaaatagaataaagaaagatatactatcatacttacagtctttgtagattgggaaggccagagaaacttccaggaattgatccatttagaagattgtgggaaagatctctgcacaaattgtacgagcatgcatataaatgatagcttgtttgccaaatacttagtaaaatagaataaacaaaaatgacaagttgttagtaagggctctatttttatacatcgtggttatgttgcttgctggtcggccagatggtattgaaccccttaactgattccaactaagatccctgaacacaaataagacaaggatcaaagctgccacacatgatataatttttgctaactacgaatatggtaattttctgttcccaaaaaggtgaagttgcagtgttggaattcgacacatacagatagccaagttggggtattccactgacatcaggaacaggtccttccaagctgcagttcctcaaactcctgatgaagatcatatccaatagattagtctctaactttcataattacttcctatcttaatttcattgaatgacctccttcggtcattccggcaaaaaaaactttcataattacagagagagtagaagtctgaattaaacctgtattcttgaaatgcaactttaccacttgatttgcaaagcattcaaaatgcaacctttctaagatgccagccatttgtgaacaagggaagctatttttggatgtgtctatcgagcaggttcccatggataattataatatcaagtaatgatagtgacttggatgcatttctaaaataagtaaaaacatgctaacatggtcatacttttgcacagcagagctggcctttgtgtagattgaaatggcaaaaaaaaaacatatacttaaacacctttctactgccataatatgcacactgatacaggtttgcttctgcaaatatgttttgttatgaataagccaggtcaaccaatgttagccaaaccattacctaaaaatattcaagagaaaaaaaaaggcgaatattagggaatgatctaatatcaaataaatagaaggggtgagacccggctagcccaccaccttgtggagctagccggaagacccctgggcggttctcctaaaaatattcaagagaccagacaatgcgtaaacatccaagattgacatcaaagttcatctcagcactatgctcagaatgtggaatcgcagacataggtaaagcgtactttcagaagtatagtaatttctcttagataatagaagatttattgaactcggtcaattacatgatacgattacactgagaacactcagcctctgcatgactaggatccacacagccaagaagtaactacactgagaggtggaattgcagatagaggtaagaaaatacttacagtttcagaagtgtggtgatattgccataagatgaaggaattgaggttcctgagaaattattgttgtcaagctggctgaaattattttgaacagatattattagagagtgctgtatatgtgtgtaattctaatatcagagactatcctttaaaagaaagtgaagaaaatgattgaataaaatcacaatggtcaagagacacaccagtagctacttttcagtaaatgagagcagcacagcgaagagccgaaagactctttctctaagctgctaaatttctagttaaattttagtaaagcaacacatataggcaaaggtctgcttgtaaacttcatgcaataacaagacacaatctagttcttggttaaagactgacattgaacccaaccaaagtaaccaaaagaaagaaagaaagaaagagctatcgcaacacagaagtttacgtacatgataagtagttttggtaacttcgataactctggaggaagatagcccgacaagttattgttatccaacaatctgtaaattaattacattgtaagtagagtttaaataaagaataccgatatggtagacgcagttgtcagaaacttacaagtgaacaagtgaaggtaatctggatagttcaggtggaatttgaccacttaatgaattgttgttcatatgactggatgaaaattggaaaactattagggtaaggataataattccctgatgcttggcatagatgtaaaaccagatgctactcacaagtgctttgttttgttcagattagcaaatgatttaggtatgggtccagatatgtagttctggtcgatctgaatcctatccagattaggaaggaaaccaatctcctctggtagagaaccagtaagctggtttccatttaagagcctgcaaaaataggatgggcacatccgcacatacttacctataagtgacaagaaaacacagattccattccagataacagaggatacaacaacaatcacacctcacctaccaacaatttatctcaaagaaataattgttttcaaaaaatatatatattatgaaggacatgttacaatggaaacatatatattcagtcaattacagctgtatcataaaaaaataatctgaacaaacaactcatgaaaaatgctaacatcaccatccaaccagaaggacatgaagatactgattcagttaaactacagttttatagcaaacaaaactaagttgaactagaagccccagaaagaagataggctcaattctaaccaaaaagatgtgaaggaaacccgtattggtgaaattgaagtaatacgggtttcaacttacagtaatttcagagaagtgatgttgccaacctccttaggtatgctgccactgatgttattccacataaaatcccttcagtggaaagaacaaaaagaaaaaaaaaaagttagcgcccttgtgagtgggcatccaaccacctaaaagctaacccattaacaaatcaatgatccagttacttgtccaacttacattatttgcatgtgagatagccgaccaagctcagcagctaaagatccagataaattcaattttagaagttgcctataatcacataaatgcatcacggcaattagatccacttgggaaaaaaaaagagatgggatctttagagagaaaattcgagcaaagtttatctttttgtactgcactaattgccccatcaaggcaatcaatattcaaatagcatggcattttttttcacaaggcaaaaaaataagaacataaagaacacagtaacattattctacttctaaaaaggagaagctatcagcagcagtggaaagtatctggttacatctcgaaaaaatgcagaatatatgaaggcggaatgtgatctattatgttatgacattcaacaaattcatcaccaaaagcacgcctaacataagctaaacaccaaaagcaaaccataagataagcaacggaaaaatgtggtataataaggacacagttaacaaggagatcacttatgctcatacaattctaatacatggagatatccatcacttgctgtttcattgtaacagtgaacataagaccaatttcccatgcacggatctccacggttccagttgtttagacgtccttgcggatctatcagattgcctttgatagctttcagagcatcaactgcagaccaaatgtaccgatgttacacctagttagcttcataatgcaaggtaaaaatcaataacactcaataacgtaaccataacaactaatatatttagaaccatggcttgtgctctcctatgcgtctcaagtgagcaggccacgcttatgacacaaagattgaaagagatatgtgcatgtagactgtagagatcagtctcaataagaggagtggaggtaaagtatggctagaatgatggatattaccttcccaaggtgcagtgatctgtgcttctgttctttgcaccaagtagaacatgaagataatggagcaaagatagaagagtcgagactgccgcatgatgctactacacagaaaatttgctcagtttggcaggatattgagaattcaccgatgtagtttccctctgatagcataatccagtccctgaaatggaacaaaggggcaacggttacttgtccagacccaaaagtgcacagaggaccatataaagtcagggatgcaccagattactgcttaaattttgagcaaagtaaagttgtaaaaaaaaagttaagcataaattttcaccagtgtagctaggaatttttgaaaactcagaggagcatcttttttttcttattaTttttaaacagcagctgagaagcgactgccgaccaccaacaccaataaaacataaatttcaaccttttcaattagagatcaataaagaagagatgttatgagatgaaagctaaaatttcaacgaagtacgtgtttgctgatgaatcccttgcaatcatgctgcgatagcatatcataccatgaatgaagggaagaattgaagaaagcctgctgtactatcttgtttattatggaaaaagaacatgtgtgcataacgtcgattgaaacaccgatgcagggaaggaatcgatagatacaacaagcataccactcagcagaaaattaaagagagaaagaaggatgaactcaccagctggtaggaggcagcagaaagaaagaatcaatcgatccgccacaccaatggaggattgtagtagaaaaggacaaacctgagtagtattagtcaagcagagataataatcaaccgaatattaactatataatggggattaagttgggcttggccgcttgggtgtgaaaatgagcgagcaaagtacagtataatattataaataaagccatgaagag
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| CDS seq | atgcggcagtctcgactcttctatctttgctccattatcttcatgttctacttggtgcaaagaacagaagcacagatcactgcaccttgggaagttgatgctctgaaagctatcaaaggcaatctgatagatccgcaaggacgtctaaacaactggaaccgtggagatccgtgcatgggaaattggtcttatgttcactgttacaatgaaacagcaagtgatggatatctccatgtattagaattgcaacttctaaaattgaatttatctggatctttagctgctgagcttggtcggctatctcacatgcaaataatggattttatgtggaataacatcagtggcagcatacctaaggaggttggcaacatcacttctctgaaattactgctcttaaatggaaaccagcttactggttctctaccagaggagattggtttccttcctaatctggataggattcagatcgaccagaactacatatctggacccatacctaaatcatttgctaatctgaacaaaacaaagcactttcatatgaacaacaattcattaagtggtcaaattccacctgaactatccagattaccttcacttgttcacttattgttggataacaataacttgtcgggctatcttcctccagagttatcgaagttaccaaaactacttatcatgagtttgaggaactgcagcttggaaggacctgttcctgatgtcagtggaataccccaacttggctatctggatcttagttggaatcagttaaggggttcaataccatctggccgaccagcaagcaacataaccacgatagatctttcccacaatcttctaaatggatcaattcctggaagtttctctggccttcccaatctacaaagactgtcattggacaataacaatttggatggttctgttccatcagatgtctggcggaatattgatttcagtggaaatagaagtcttatattggatttccagaacaattctctaaccaatctatcaaatcctctttcaccacctgccaatgttaccatcctgttatctggaaaccccatctgcacatctccaaatcaactgaacattactcagtactgtcaatcagtgccagttattgtgcctgacggttctgcaagtaatgccacagtttgtccgccatgctctactgaccttccgtttgaaaacatactgatgtcaccaatacgatgtatatgtgctattccactttatgttgattaccggctaaagagtcctggattttgggattttgttccatatgaaggacagtttcaacagtacttgtcatctggactttcattgtcttcttaccaattagaagtttctcaatttatgtgggaagaaggcccacgggtgaagatgaatctgaaactgtttccaaataacactgcttattttaataagagcgaggtgttaagactgagaggaatgttcacaggctggctgattccagactctgatatattcgggccctatgagctcctcaacttcaatccagggtggtataacaatttatttccagatcgtgcaaagtccagcctaagtacaggtgccattgttggtattgtcgtggcagcgtttgctgcagcagcatttctttcatccctcattactctcattatactgagaagacgttcaagatattcttcaaaaagacgctctgcaaaaagaattccaatgaagattgatggtgtaaaagacttcagttttcaagaactgtcacatggtacaaacgactttagtgactcagcactaattggtcaaggagggtatgggaaagtgtacagaggtattctctctgatggaacaatagtagcaataaaacgtgcgcagcagggatctcttcagggttcgaaggagttcttcacagagatagaattgctgtccaggctgcatcaccggaaccttgtttcattgcttggttattgtgatgaagaagatgagcagatgctggtatatgagtttatgcctaatggtactctacgtgatcatctttcagctcgatcaaaagagcccctaaattttcccacgaggttacgaattgcgctggggtcgtcgcgaggcatcctctatttacacacagaagcagaccctccaatatttcaccgtgacatcaaagcaagcaatattttactggactcaaagtttgtcgcaaaagttgctgattttggtctctctcggcttgccccagagccagaatcagaggggattgctcctggtcatgtgtcaactgttgtaaagggtaccccgggttatcttgatccggagtatttccttactcataagctgacagacaaaagtgacgtgtacagccttggtgttgtttttctggaactgctgacagggatgcaacctatttctcatggaagaaatatagttagagaggtatag
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| Protein seq | MRQSRLFYLCSIIFMFYLVQRTEAQITAPWEVDALKAIKGNLIDPQGRLNNWNRGDPCMGNWSYVHCYNETASDGYLHVLELQLLKLNLSGSLAAELGRLSHMQIMDFMWNNISGSIPKEVGNITSLKLLLLNGNQLTGSLPEEIGFLPNLDRIQIDQNYISGPIPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSKLPKLLIMSLRNCSLEGPVPDVSGIPQLGYLDLSWNQLRGSIPSGRPASNITTIDLSHNLLNGSIPGSFSGLPNLQRLSLDNNNLDGSVPSDVWRNIDFSGNRSLILDFQNNSLTNLSNPLSPPANVTILLSGNPICTSPNQLNITQYCQSVPVIVPDGSASNATVCPPCSTDLPFENILMSPIRCICAIPLYVDYRLKSPGFWDFVPYEGQFQQYLSSGLSLSSYQLEVSQFMWEEGPRVKMNLKLFPNNTAYFNKSEVLRLRGMFTGWLIPDSDIFGPYELLNFNPGWYNNLFPDRAKSSLSTGAIVGIVVAAFAAAAFLSSLITLIILRRRSRYSSKRRSAKRIPMKIDGVKDFSFQELSHGTNDFSDSALIGQGGYGKVYRGILSDGTIVAIKRAQQGSLQGSKEFFTEIELLSRLHHRNLVSLLGYCDEEDEQMLVYEFMPNGTLRDHLSARSKEPLNFPTRLRIALGSSRGILYLHTEADPPIFHRDIKASNILLDSKFVAKVADFGLSRLAPEPESEGIAPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGRNIVREV |
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| Function | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [UniProtKB/Swiss-Prot:C0LGD7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0046820 | OsLima_01g0046820.01 | Chr01 | 44068885 | 44081186 | - | NAM | ||
| CDS seq | atgcggcagtctcgactcttctatctttgctccattatcttcatgttctacttggtgcaaagaacagaagcacagatcactgcaccttgggaagttgatgctctgaaagctatcaaaggcaatctgatagatccgcaaggacgtctaaacaactggaaccgtggagatccgtgcatgggaaattggtcttatgttcactgttacaatgaaacagcaagtgatggatatctccatgtattagaattgcaacttctaaaattgaatttatctggatctttagctgctgagcttggtcggctatctcacatgcaaataatggattttatgtggaataacatcagtggcagcatacctaaggaggttggcaacatcacttctctgaaattactgctcttaaatggaaaccagcttactggttctctaccagaggagattggtttccttcctaatctggataggattcagatcgaccagaactacatatctggacccatacctaaatcatttgctaatctgaacaaaacaaagcactttcatatgaacaacaattcattaagtggtcaaattccacctgaactatccagattaccttcacttgttcacttattgttggataacaataacttgtcgggctatcttcctccagagttatcgaagttaccaaaactacttatcatgagtttgaggaactgcagcttggaaggacctgttcctgatgtcagtggaataccccaacttggctatctggatcttagttggaatcagttaaggggttcaataccatctggccgaccagcaagcaacataaccacgatagatctttcccacaatcttctaaatggatcaattcctggaagtttctctggccttcccaatctacaaagactgtcattggacaataacaatttggatggttctgttccatcagatgtctggcggaatattgatttcagtggaaatagaagtcttatattggatttccagaacaattctctaaccaatctatcaaatcctctttcaccacctgccaatgttaccatcctgttatctggaaaccccatctgcacatctccaaatcaactgaacattactcagtactgtcaatcagtgccagttattgtgcctgacggttctgcaagtaatgccacagtttgtccgccatgctctactgaccttccgtttgaaaacatactgatgtcaccaatacgatgtatatgtgctattccactttatgttgattaccggctaaagagtcctggattttgggattttgttccatatgaaggacagtttcaacagtacttgtcatctggactttcattgtcttcttaccaattagaagtttctcaatttatgtgggaagaaggcccacgggtgaagatgaatctgaaactgtttccaaataacactgcttattttaataagagcgaggtgttaagactgagaggaatgttcacaggctggctgattccagactctgatatattcgggccctatgagctcctcaacttcaatccagggtggtataacaatttatttccagatcgtgcaaagtccagcctaagtacaggtgccattgttggtattgtcgtggcagcgtttgctgcagcagcatttctttcatccctcattactctcattatactgagaagacgttcaagatattcttcaaaaagacgctctgcaaaaagaattccaatgaagattgatggtgtaaaagacttcagttttcaagaactgtcacatggtacaaacgactttagtgactcagcactaattggtcaaggagggtatgggaaagtgtacagaggtattctctctgatggaacaatagtagcaataaaacgtgcgcagcagggatctcttcagggttcgaaggagttcttcacagagatagaattgctgtccaggctgcatcaccggaaccttgtttcattgcttggttattgtgatgaagaagatgagcagatgctggtatatgagtttatgcctaatggtactctacgtgatcatctttcagctcgatcaaaagagcccctaaattttcccacgaggttacgaattgcgctggggtcgtcgcgaggcatcctctatttacacacagaagcagaccctccaatatttcaccgtgacatcaaagcaagcaatattttactggactcaaagtttgtcgcaaaagttgctgattttggtctctctcggcttgccccagagccagaatcagaggggattgctcctggtcatgtgtcaactgttgtaaagggtaccccgggttatcttgatccggagtatttccttactcataagctgacagacaaaagtgacgtgtacagccttggtgttgtttttctggaactgctgacagggatgcaacctatttctcatggaagaaatatagttagagaggtatag
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| Protein seq | MRQSRLFYLCSIIFMFYLVQRTEAQITAPWEVDALKAIKGNLIDPQGRLNNWNRGDPCMGNWSYVHCYNETASDGYLHVLELQLLKLNLSGSLAAELGRLSHMQIMDFMWNNISGSIPKEVGNITSLKLLLLNGNQLTGSLPEEIGFLPNLDRIQIDQNYISGPIPKSFANLNKTKHFHMNNNSLSGQIPPELSRLPSLVHLLLDNNNLSGYLPPELSKLPKLLIMSLRNCSLEGPVPDVSGIPQLGYLDLSWNQLRGSIPSGRPASNITTIDLSHNLLNGSIPGSFSGLPNLQRLSLDNNNLDGSVPSDVWRNIDFSGNRSLILDFQNNSLTNLSNPLSPPANVTILLSGNPICTSPNQLNITQYCQSVPVIVPDGSASNATVCPPCSTDLPFENILMSPIRCICAIPLYVDYRLKSPGFWDFVPYEGQFQQYLSSGLSLSSYQLEVSQFMWEEGPRVKMNLKLFPNNTAYFNKSEVLRLRGMFTGWLIPDSDIFGPYELLNFNPGWYNNLFPDRAKSSLSTGAIVGIVVAAFAAAAFLSSLITLIILRRRSRYSSKRRSAKRIPMKIDGVKDFSFQELSHGTNDFSDSALIGQGGYGKVYRGILSDGTIVAIKRAQQGSLQGSKEFFTEIELLSRLHHRNLVSLLGYCDEEDEQMLVYEFMPNGTLRDHLSARSKEPLNFPTRLRIALGSSRGILYLHTEADPPIFHRDIKASNILLDSKFVAKVADFGLSRLAPEPESEGIAPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGRNIVREV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLima_01g0046820 | OsLima_01g0046820.02 | Chr01 | 44068695 | 44072109 | - | IsoSeq | ||
| CDS seq | atgcgtggagaagtttgctgcactggcactgagatgctgccgagacgagacggacgcaaggccgtccatagtggaggtgatgagggagctggagaagatatggcaaatgacaccggacaccgggagcatgtcctcactatccttgga |
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| Protein seq | MRGEVCCTGTEMLPRRDGRKAVHSGGDEGAGEDMANDTGHREHVLTILG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.956030 | 0.862306 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0960400 | RBH | 3.927451 | 3.956542 | 5.098091 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72990 | RBH | 1.823878 | 2.153770 | 1.091076 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0960400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0047810 | RBH | 1.578236 | 46.214420 | 9.998759 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0047300 | RBH | 0.542956 | 3.894142 | 4.234435 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0047800 | RBH | 3.777718 | 35.456352 | 18.058813 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0047180 | RBH | 0.954833 | 0.359982 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0046730 | RBH | 22.392342 | 27.390610 | 47.646648 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0576700 | RBH | 20.3235165 | 60.5722005 | 6.044853 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0036840 | SBH | 2.318073 | 2.420932 | 3.026834 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0695300 | RBH | 10.4540305 | 52.6730995 | 30.409257 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004500 | SBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0046660 | RBH | 1.308090 | 18.786926 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046990 | RBH | 28.270214 | 29.487116 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046980 | RBH | 0.000000 | 0.000000 | 0.892832 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0046730 | RBH | 1.913669 | 14.206080 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G047010 | RBH | 2.454068 | 2.858821 | 6.592878 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0046760 | RBH | 6.428812 | 58.697754 | 16.480141 |
