Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_12g0002090 | OGI:12004120 | 13/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr12:1519466-1526688 | ||||||||
| Gene Symbol | DLN251, OsDLN251 | ||||||||||
| DNA seq | ttcctggatccaggtgaccaggtcggacagctgcggtcaacgcaaacaacgagtaaacgcaaggctgcaagcagaaagggtcaacgcgaacaacgagtaaacgcaaggctgcaagaagaaaggcgcaaggtacgagccgtgccgcgagcagcggtgtgcgctagacggagcagtgcagccacggtagacgtgcaggctgcatcgacaaagggcggtcatcggtgctgctcaaggagtagcagcaggacctccaggtagccgcgaccgtcgaaagcatcagcagatcccaaaatcagtatgtgcccttcaatctatcctcagctcagctttctcgatgtggattcgtcctccaaattcttctcttgcccttagcaaaattgtccattttatgtgtaatgaatctgtgctaagatctatggattcattctccaattctctgtgctatttcattctttgtccatgtcttcgcggtgaataatcggtgaaaagtgggctcgagtatgtcacagcgaatctcgggaacttcgtcccgaaacgaggcttgacaatgtaccgatcgcagccggatcttgtctggtataaggcggacgagcgcctctattgctccctcactgcgccgccgccgtcgtcgtgtgaggaggatggatgagcgctgccgttgtcgcgccgagtgggatggacgagcgccgagccgcttgcgggcctccctcgctcgctttgggctggtggtggtctggctttgggctttaccgctttagttattgggccagaaaatattactcgctagttagaaagctactactaatagtttggcacgttagtttaagaacctgaatcgagaaaatagagaagtgaaggcctcctatgcatctgcatcgcaattgatccacgatcgatcatcattccggatcatcgtcccgaaattattttaaaatttgttgttgtcctatgtcgctaactagtgttttaaagagccatcttttggaagatggagcctcagaccgaggttgtgctgtaggttctcagtgatgggccagggctatagttaggaggggtgaaattggaacacataccaagatggatacggatacaagcaatacggagtatgggttacggatatttattggaattcaagtcaaagcaacaaccgtacatatcaaatttataatagacattaaaccactctatgtattcaaaattgaaaaggcaactagattaatgcatattaaaaattaatagtagcaactctagcatgactgatttactgcatttacatcattagtagttttaccactagtattttaatcttgcagggagttttgcactagtagtatagtttactctcatcaaactagccgtacctatgagtttacaagtatagtcaacccaaaatgtgcatccatgcatactattcacggcttcacgaattatgcaaatacgtgactgcgtgtgcgttaataccaaggtacccaatagagtttgcaggcgagcacacgtctctcgtttgtttgctcatgtttctttgggttgtgtgcaatatttaatcagtaacttttgttttcttttttttatcaagagcctgacggctcccatttcttttactagaaatgaaacatcgagctacaatagtcttcagaaaaaaaacaggaaagttcaaaagctagccctattacaagggttcctgactcttttcagaagttttgcctaaacagatatctaacagtaaaaaagaaggaaagggaattacaaaacatcatcacttatatctatctcatcccttgatccttttggtgttgattctccatccgaactgcgagttgtagacttcagttaccgactgtcttatgagtctggatcccagtagcagtcttcttcgacttgcctcctccttctgcagtagtgcccaggaatcaacccaatggcaagccaaaaagatcacaccagtggggtcttttggataaactttttcaaaacaagctttatttctagatttccagatggcccaaattatagcagccattcctaccataactaagtctttcatgttcttatcaagttttttcaaccaatctccaaacatgttttgaccatcaagggctgggttcagattcaggacacaaattgcagtgttccacattaatcttgccaggggacagtcaaaaaacaagtgttgtatagtctcctctctatcacagaactgacattttttatccccttttctccaacctctcttgtataaattgtcttttgttaagatcttatttttggtgaagagccaaaaaaaaccttaatcttcaaaggagttctgaacttccaaattttttttctgtgggaaatgcacttgttgtagcttcaaagctttgtagaaagagttcacactgaaaattccatccttagttaaattccatcgtagtttgtcattgcagttatcttttaactgcagatcaccccaactagtataaattttgtgccaatctctcaatctccctccactcaggtctctcctaaacttgatgcaatttatccctttttgtttcagttttgccacagttatatgttttgtcaaagtgatattgtaaaggttggggaattgttcatttaaaggtttgccccctatccagctgtcctcccagaaaagtgtattttcaccattgcctatcaccctggagcagaatttcagaaagatgtttttgatctccatgagcccatgccagaaatgggactctccatttttaaatttcaataaagatatgggtttgcaacccatgtatttacttgtcaaaaagctttgccaccaaccttcctcattttccaatctccagatccatttccctaacaacgctttgttcattgtttccaaatccaggatccccaggcccccttgatctttgggtgaacataccaccggctattgtaccagatgatattttcttatcccttgatcttcttgccacaaaaatctcctcctgtaaaaatccaatctctctctaactccttgtggcagtctgtagaaggatatcatgtaaaggggcacattgctaaggcttgaattgaataaaatcaatcttcctccaatagattgaagtttgccactttgccttgccagcatcccaatttgtgttccatttttgttctcagcgtttttccaattcatgtaacttttgttttcatgcttatgtattattagcttatacatttttaatgtcatattattgtatggactgttttatgaataagtttattatatatatgtttaattgtagaagacaataaaaaataattttcattaccacatatatatttctctttaacaggatatggcctttgctgaatcaatatggacctttatgccaggaaagaagggatcagttgttcaggggccaaacactagaactctaacaaatgctcatgatggtatcttggatgatattaattgtgctcagattgctgggaagcatgtgggagatcattccaattgtgctaatgtcatcaaggtagatatatgctataactttctattaattcttggtatcttttcaattttgatacatgttaactagtgccttttccataatgtctgttccacatgtattttcacgctttgatatgaatatttgagtacatagatttgaattatattataccatcttttcctccttagaaaacatagcatgttatggttaaaagtattgatgaaacttcctagctttccctttgaaccatgacaaactccccattccagagatgcgctttcaatgatttcagatggtcatgtatgttgttggatagcagtttattctttgtattgcagcatttcaaaaccgaattacatctgtgttcgctgcacgcagttgggaacctatctccagcgcacggaaaacggaacggtccattagcgcgcggttaattaagtatttgctatttttttaaaaaaatggatcaatatgattttttaagtaactttcgtatagaaattttttttgcaaaaaacacaccatttaatagtttaaaaagcgtgcgcgcggaacacaagggagatgagttaggaacccttcctaccgaactaagcacttctcaattttttgtatgaaattattttgatattccatacattgttgtatgtttcatgcatgcaggagaatccttgtttatcgtcttcaaaacattatgttggattctgttcagcggataggtccgctgggccatcatgtgtttcatttactctttcaggcctgacaatgaaaggctggagtcatatcattgctaggaaagctagttcaatatcctgagagacctggtgaaccattctgtcgatactacatgaagtttggggaatgtaaacatatgattttctgtaaatacaatcacccaaaagataggttcagttgcaagaccacaaacactatcagatcagaatccttatgcctgcatgaccaggtttgtgtggggtgagtttttcattatttattaggaacaacttcactgtgaaagagcatatagcctagtggctgcagtgacttaagtagcactccaaggtcttgagtttaaatctccacaggagcgagattaagttccctgtttgatggtatagaagcccttctctaaaaaaatttagaagccggctaagtttctaaaaaaggcggcacatatccattaaaaaggcatttaaatccagttggatgtagttccctgtttctgtttgatgtgctaagttcctaattttaaaaaggcattcaagttcctaaaaaaggctgcatatatccatttaaaaggtattcaaatccaattctgtttgatatgctaagttcctaattttaaaaaggcatttagtagctgggtaaaaaatacccttctctagaaaaaatggttcttcttactgaccggttagaaaatacacttctctAaaaaaaaattggttattcttactgaccgaaaatacccttctcagaaaaaaacaaggtttttcttactgaccgtgcaaaatccgattatagctgatattatgatgactcatgtgttataccttatgcagcagacaacaattttggaaaatcaatttgggttaccttcacttgttgataaggccacagctaacacaacaaatcttgtggcatctgcgtcatcttccatgacacccgatgaaataggagaggggaaaaacaatccagatgaggtaatgccattggcatccatcgcttgtttattttagaaatcctatgtaatgtgagtgctttgtgttatctgctgcttgcatagcttgattgtagttttgtgaatttcacaggtgtttgtatgtatatgtggagagaagcttttattccatacaaacttcaatacaacggcagtaaaagaacttgtcgtatttgctctccagaggaggaacatcaagtattgtgatatttatgtaacatggtacagaaaagttctgaaaggagatgagatcttgagctccatacctatccacacgaatacgcatattcatgtgacacccagactgaggggtggagagtacgtaccgcgtaacttatctatgtatatgtattttatcacttcctactttagaggtgtaacaagtgttcatttgcaggttaattccaatggaatatgagcgtatggatgaacttattgaccgtgcggtccgtgacaataataatgaccttttctattatgtgaaccttcccccagaattgataaacccttataaggatacatgggtaacttttctaagtgatttctcgagatatatcatacaccaactattggtatgtgtttcccgtgatggtcaccagcggaatattacttggtatggtacttctgatctccgggacgtactgatttcaagcgggcatgttaggatcagcccccatatcgtcgaaaatacatacacccctattggtggtagacttgattatcttaagctagtttcaattctaaaggataaattcgtcgataatttacaaggttcttcctccccttgccatctgaacaatttactttctgtattgtgcactacttcccatgaaacttatggaagatccgatctattcattacattttttataaaccatccgtgcttgttatcatgtggagaaagagttgcacgataccttcaatatgatcatatgattacaaatcttgtgcaacgcgatcttcgcaaatttaagcaatatttgaatgatacttttggagatcctccttcttggatcgctgatatcagctgggttcctgacatgtggaagacatacaattatagtcctaataacaactcaacgttatggaccccacgatatactttggatctaaacagttgctcacattttgccaggaatttcttgaaccatttcggtcgtgaggttagtctttttttaattattattttaacttttctatatgaaccggtttaggcttttgtttgagcttagacttttaagcaactttttggctcatgtgatttatacaccaatattataggctcttatatctgccagttgtaaaaccaacactgatgaccatcattaattggtgctgctttgtaggtgacggctgccaatctagcacttatgctaggttagcagccaacacttagggtttatttactagtgcttttaagggtcctatcttcacttcacataaactaaaaattactataacttagcttttagcttaacaatataagagtagcttatggtttattggttttaaaaaagccaaatgaaaaaaaaactaaaaaactgtttgtttgccttagattttttagatatataagagtgaagtaacgtcttgctataataagtgaggagaggccaacctctatagaatgaaaactttactgcatgtgggtgtgaacaaggaatgaatagtaataaaaaagttttattaatactttagagcctttgtagtctccaccattataaagacatagtttttaaataaatatgcattatctaagagtttatatggactctacctttaaacatacccatactgttctattcttgcataggtttctttgcaggcagctgaggctgccgtttctcagaatctagagtttctgcttccaaccatcatgatgctaatgcctgtgtacaatggacctcatcattggaacaatgacttcatggagatgtaagggaaagtgatcatctatttttcctcgtttatatattatcttgattcttgagtactagacaatttcttgttgtagattgttaaacacaaactga
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| CDS seq | atggcctttgctgaatcaatatggacctttatgccaggaaagaagggatcagttgttcaggggccaaacactagaactctaacaaatgctcatgatggtatcttggatgatattaattgtgctcagattgctgggaagcatgtgggagatcattccaattgtgctaatgtcatcaagcggataggtccgctgggccatcatcagacaacaattttggaaaatcaatttgggttaccttcacttgttgataaggccacagctaacacaacaaatcttgtggcatctgcgtcatcttccatgacacccgatgaaataggagaggggaaaaacaatccagatgaggtgtttgtatgtatatgtggagagaagcttttattccatacaaacttcaatacaacggcagtaaaagaacttgtcgtatttgctctccagaggaggaacatcaagtattgtgatatttatgtaacatggtacagaaaagttctgaaaggagatgagatcttgagctccatacctatccacacgaatacgcatattcatgtgacacccagactgaggggtggagagttaattccaatggaatatgagcgtatggatgaacttattgaccgtgcggtccgtgacaataataatgaccttttctattatgtgaaccttcccccagaattgataaacccttataaggatacatgggtaacttttctaagtgatttctcgagatatatcatacaccaactattggtatgtgtttcccgtgatggtcaccagcggaatattacttggtatggtacttctgatctccgggacgtactgatttcaagcgggcatgttaggatcagcccccatatcgtcgaaaatacatacacccctattggtggtagacttgattatcttaagctagtttcaattctaaaggataaattcgtcgataatttacaaggttcttcctccccttgccatctgaacaatttactttctgtattgtgcactacttcccatgaaacttatggaagatccgatctattcattacattttttataaaccatccgtgcttgttatcatgtggagaaagagttgcacgataccttcaatatgatcatatgattacaaatcttgtgcaacgcgatcttcgcaaatttaagcaatatttgaatgatacttttggagatcctccttcttggatcgctgatatcagctgggttcctgacatgtggaagacatacaattatagtcctaataacaactcaacattgttaaacacaaactga
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| Protein seq | MAFAESIWTFMPGKKGSVVQGPNTRTLTNAHDGILDDINCAQIAGKHVGDHSNCANVIKRIGPLGHHQTTILENQFGLPSLVDKATANTTNLVASASSSMTPDEIGEGKNNPDEVFVCICGEKLLFHTNFNTTAVKELVVFALQRRNIKYCDIYVTWYRKVLKGDEILSSIPIHTNTHIHVTPRLRGGELIPMEYERMDELIDRAVRDNNNDLFYYVNLPPELINPYKDTWVTFLSDFSRYIIHQLLVCVSRDGHQRNITWYGTSDLRDVLISSGHVRISPHIVENTYTPIGGRLDYLKLVSILKDKFVDNLQGSSSPCHLNNLLSVLCTTSHETYGRSDLFITFFINHPCLLSCGERVARYLQYDHMITNLVQRDLRKFKQYLNDTFGDPPSWIADISWVPDMWKTYNYSPNNNSTLLNTN |
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| Function | Putative zinc finger CCCH domain-containing protein 64 [UniProtKB/Swiss-Prot:A3CEM4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_12g0002090 | OsLiXu_12g0002090.01 | Chr12 | 1519466 | 1526688 | + | NAM | ||
| CDS seq | atggcctttgctgaatcaatatggacctttatgccaggaaagaagggatcagttgttcaggggccaaacactagaactctaacaaatgctcatgatggtatcttggatgatattaattgtgctcagattgctgggaagcatgtgggagatcattccaattgtgctaatgtcatcaagcggataggtccgctgggccatcatcagacaacaattttggaaaatcaatttgggttaccttcacttgttgataaggccacagctaacacaacaaatcttgtggcatctgcgtcatcttccatgacacccgatgaaataggagaggggaaaaacaatccagatgaggtgtttgtatgtatatgtggagagaagcttttattccatacaaacttcaatacaacggcagtaaaagaacttgtcgtatttgctctccagaggaggaacatcaagtattgtgatatttatgtaacatggtacagaaaagttctgaaaggagatgagatcttgagctccatacctatccacacgaatacgcatattcatgtgacacccagactgaggggtggagagttaattccaatggaatatgagcgtatggatgaacttattgaccgtgcggtccgtgacaataataatgaccttttctattatgtgaaccttcccccagaattgataaacccttataaggatacatgggtaacttttctaagtgatttctcgagatatatcatacaccaactattggtatgtgtttcccgtgatggtcaccagcggaatattacttggtatggtacttctgatctccgggacgtactgatttcaagcgggcatgttaggatcagcccccatatcgtcgaaaatacatacacccctattggtggtagacttgattatcttaagctagtttcaattctaaaggataaattcgtcgataatttacaaggttcttcctccccttgccatctgaacaatttactttctgtattgtgcactacttcccatgaaacttatggaagatccgatctattcattacattttttataaaccatccgtgcttgttatcatgtggagaaagagttgcacgataccttcaatatgatcatatgattacaaatcttgtgcaacgcgatcttcgcaaatttaagcaatatttgaatgatacttttggagatcctccttcttggatcgctgatatcagctgggttcctgacatgtggaagacatacaattatagtcctaataacaactcaacattgttaaacacaaactga
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| Protein seq | MAFAESIWTFMPGKKGSVVQGPNTRTLTNAHDGILDDINCAQIAGKHVGDHSNCANVIKRIGPLGHHQTTILENQFGLPSLVDKATANTTNLVASASSSMTPDEIGEGKNNPDEVFVCICGEKLLFHTNFNTTAVKELVVFALQRRNIKYCDIYVTWYRKVLKGDEILSSIPIHTNTHIHVTPRLRGGELIPMEYERMDELIDRAVRDNNNDLFYYVNLPPELINPYKDTWVTFLSDFSRYIIHQLLVCVSRDGHQRNITWYGTSDLRDVLISSGHVRISPHIVENTYTPIGGRLDYLKLVSILKDKFVDNLQGSSSPCHLNNLLSVLCTTSHETYGRSDLFITFFINHPCLLSCGERVARYLQYDHMITNLVQRDLRKFKQYLNDTFGDPPSWIADISWVPDMWKTYNYSPNNNSTLLNTN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0129550 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g03554 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0129550 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0001950 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0002160 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0002170 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0001970 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0002110 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0002100 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0002130 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0001190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G001090 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0001280 | RBH | 0.0 | 0.000000 | 0.000000 |
