Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_11g0021120 OGI:11072350 | 14/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr11:28503187-28506567
Gene Symbol PIKH, Pi-kh, Pi k-h, Pi54, Pi54rh, Pi-k(h), Pik-h, Pikh, -
DNA seq

atgtcggagctggaggtgtatagcttgctgcagaagatggcggcgatgagggacggcggcgactggccggccggtgcggagttggagttgcaggagttgtacaccgtcctcgagaaggtgcagcgcaaggtggctcacgcggtgccgctggtagacagccgcagctccgccgcctactccaccttcctcgcggacctccgccgcgtcgcgttcaccgtcgacgacgccctcgacagctactccgccagcgcccgccgcttcccgttcaggcacaaaatccgccacaccctcaccaccatcgtcgaagagatgctctcactattagtcccgatgatggggttcacaatacccattctcgttcgcaagattggctcgcccggttcgtctcctctgcagccggaacagccttcggcgccgccgctaaagctgcgccccaagatcgctagacggttcgaagatgccgtgaaggacgtgaggatgcttctccgcctcttcagtacctacgtcgccgatctcctgccgccgccggagcaccagcagccagagcctggtctcggcgctgaccccgacgaaacgtggtctcttcccgatcaagaagctgtcagaggaagagaacaggacatgtataaaatacggcagatcctcgaacatcctggaacgaaagtggtcgcaattgtaggaatggccggggtcgggaagacggagctcaccaggcatctgctgaacgacaagagtagtgctactacgcatggcttcaactactctctttgggttccagtgtcccaagatttcaatccagaatggatttatcggcaggtgatttctaagctgagcgttcaattgaaggcaggcgaagatgctgaaagcttctggtggtctctaaattcagatctaaatgaaggcttgatcaataagaagcatctgcttgtgctcgatggcgtctggaacgaagaccctcgtaagtggaaggaactgatggatctcctctacggcaattgcacgcaaaagaccaaaatcatcgtcactaccaggattcctgcagcggctgctgctataagctctgcagtaatctaccacctgcacccgttctcggtggagcataccttggagatgctccaaacgatcaatggggagctgcctgagaagttgctcggcggtggcagtagcaacgctaccgtgtctactgctgcggctaaagaattgagtaagaggaaggtcgcagagagatgcagcggtttgcccaccatcataaagttcttgagctcttctcttgaatctatctgtgcaaacgaggttgctgatccactaaaacagtttgatatgatgtgtgctggcaaccaaggactgctgcacatcgctgaggccagctataaccatcttccaccacatctgaagcggtgcttcctctactgctccttgttcccatatcatcacatctttgatattgacgagatgattagcctgatggttgctgaaggtttaacacagactacaagcagggaggcccaagtggatggtgatatcagcaggcttctgagtgaatgctttgatcttgtcaataatcctgggtctaatgggggaaacagaagaggatgcatgatgcatcgagtattgcacatccttgcacggcacaaagggcaagaactatataaagctattgtgggtgatcattctgctgctttgaaagaacattccaatatcagatatatgtctctcacagttgatcatacaactacggagctcccagggtcgctgactgcgcacacagatttgaggacgctgatcctactcagaacgcagaagatggtcttgtctggtcagaagtctgaaatcaaagagatcccttctgattactgccgctatctcacatacttgcgtgtattggacctgcaggcaaccaagatcaataagttgcctgagaaagtcgaaatgctctcaaatctgaggtatctgaacctttcccaaaccgatattgacaaactgcctgaatcaattggcagacttcagtacctggtatccctcaacatttctcaaacatgcattgcgacagttccagattatattggcaaaattcactctttgaggtacctcaatctttcacaaactgatattggaaaactgcctgattcaatttgttcgctccgactgttgcaaaccttgcagctatcacgctgtgaaaagcttaccaaactaccacaaaatataggatccgtgacaagtttacaaaggttagacctagaaggttgctactatctatccgagatgcctcaggatataagcaacttgaaaaatgtgaaggagctaaatgtactggaatgtccctcactggataaaatgccttgtgggctgagtgcactaaccaagattgaagcattgccaaggtacattgcaaccagtggtgacaacaatcccatattggagctgcgggatttggtaaaattgaaaagactgggtttggaaaacattgcaaatatttccaatgaggatgccgagaaaatacaactgcaaaagaaacatgagctcgagcatttgacactgcattgcaaacagcatcgagaagtggaggctgaaagaggtaaatcaagttctgaagtgaaggagctactggaccatctagagcccaatccagagctgaaaacactcaagatcatttcctatgaaggggaagagttcccgtgctggatggccaacacaaatctaaaaaagctcactcaagtcagaatcatcagattgattaatctgaagtgtaagagtctcccaccgcttgggcagctacctcatcttgagactctagagattagtggaatgggggagataagggaagtcagcagtgagctaaacggtcacgttgatgatacattccattctctgaagaagatcaccttttctcagatggtgaacctagaatgttggccggtaaatggggctaaatgtgagaatcttaaagagttgtcaattatccaatgccccaaattccacaacctgtcgatgaatcttgaaattgaaaagctgactgtatggatgagtccttcaaatttgctttgcagaggtggattgacaggcgttgctggcagtctgaaaagcatatcaatttcactatgtgaagagctgtcggcatcatcagattgcgagggtctaacgactcttcctaaacttgaggagttaaacatttctggatgtgatgaactggagagattaccgctgggtatagaaaatcttactgcactcaaaagattgtcagttattggatgtcagaagtttcaaaatttaacagatttaaaggttggcactgctctgacttccctgcacatatcaagctgtccaatgctacaacagaaatccgtcccaatgcatttgagagggatcacaagttacgagtaa

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CDS seq

atgtcggagctggaggtgtatagcttgctgcagaagatggcggcgatgagggacggcggcgactggccggccggtgcggagttggagttgcaggagttgtacaccgtcctcgagaaggtgcagcgcaaggtggctcacgcggtgccgctggtagacagccgcagctccgccgcctactccaccttcctcgcggacctccgccgcgtcgcgttcaccgtcgacgacgccctcgacagctactccgccagcgcccgccgcttcccgttcaggcacaaaatccgccacaccctcaccaccatcgtcgaagagatgctctcactattagtcccgatgatggggttcacaatacccattctcgttcgcaagattggctcgcccggttcgtctcctctgcagccggaacagccttcggcgccgccgctaaagctgcgccccaagatcgctagacggttcgaagatgccgtgaaggacgtgaggatgcttctccgcctcttcagtacctacgtcgccgatctcctgccgccgccggagcaccagcagccagagcctggtctcggcgctgaccccgacgaaacgtggtctcttcccgatcaagaagctgtcagaggaagagaacaggacatgtataaaatacggcagatcctcgaacatcctggaacgaaagtggtcgcaattgtaggaatggccggggtcgggaagacggagctcaccaggcatctgctgaacgacaagagtagtgctactacgcatggcttcaactactctctttgggttccagtgtcccaagatttcaatccagaatggatttatcggcaggtgatttctaagctgagcgttcaattgaaggcaggcgaagatgctgaaagcttctggtggtctctaaattcagatctaaatgaaggcttgatcaataagaagcatctgcttgtgctcgatggcgtctggaacgaagaccctcgtaagtggaaggaactgatggatctcctctacggcaattgcacgcaaaagaccaaaatcatcgtcactaccaggattcctgcagcggctgctgctataagctctgcagtaatctaccacctgcacccgttctcggtggagcataccttggagatgctccaaacgatcaatggggagctgcctgagaagttgctcggcggtggcagtagcaacgctaccgtgtctactgctgcggctaaagaattgagtaagaggaaggtcgcagagagatgcagcggtttgcccaccatcataaagttcttgagctcttctcttgaatctatctgtgcaaacgaggttgctgatccactaaaacagtttgatatgatgtgtgctggcaaccaaggactgctgcacatcgctgaggccagctataaccatcttccaccacatctgaagcggtgcttcctctactgctccttgttcccatatcatcacatctttgatattgacgagatgattagcctgatggttgctgaaggtttaacacagactacaagcagggaggcccaagtggatggtgatatcagcaggcttctgagtgaatgctttgatcttgtcaataatcctgggtctaatgggggaaacagaagaggatgcatgatgcatcgagtattgcacatccttgcacggcacaaagggcaagaactatataaagctattgtgggtgatcattctgctgctttgaaagaacattccaatatcagatatatgtctctcacagttgatcatacaactacggagctcccagggtcgctgactgcgcacacagatttgaggacgctgatcctactcagaacgcagaagatggtcttgtctggtcagaagtctgaaatcaaagagatcccttctgattactgccgctatctcacatacttgcgtgtattggacctgcaggcaaccaagatcaataagttgcctgagaaagtcgaaatgctctcaaatctgaggtatctgaacctttcccaaaccgatattgacaaactgcctgaatcaattggcagacttcagtacctggtatccctcaacatttctcaaacatgcattgcgacagttccagattatattggcaaaattcactctttgaggtacctcaatctttcacaaactgatattggaaaactgcctgattcaatttgttcgctccgactgttgcaaaccttgcagctatcacgctgtgaaaagcttaccaaactaccacaaaatataggatccgtgacaagtttacaaaggttagacctagaaggttgctactatctatccgagatgcctcaggatataagcaacttgaaaaatgtgaaggagctaaatgtactggaatgtccctcactggataaaatgccttgtgggctgagtgcactaaccaagattgaagcattgccaaggtacattgcaaccagtggtgacaacaatcccatattggagctgcgggatttggtaaaattgaaaagactgggtttggaaaacattgcaaatatttccaatgaggatgccgagaaaatacaactgcaaaagaaacatgagctcgagcatttgacactgcattgcaaacagcatcgagaagtggaggctgaaagaggtaaatcaagttctgaagtgaaggagctactggaccatctagagcccaatccagagctgaaaacactcaagatcatttcctatgaaggggaagagttcccgtgctggatggccaacacaaatctaaaaaagctcactcaagtcagaatcatcagattgattaatctgaagtgtaagagtctcccaccgcttgggcagctacctcatcttgagactctagagattagtggaatgggggagataagggaagtcagcagtgagctaaacggtcacgttgatgatacattccattctctgaagaagatcaccttttctcagatggtgaacctagaatgttggccggtaaatggggctaaatgtgagaatcttaaagagttgtcaattatccaatgccccaaattccacaacctgtcgatgaatcttgaaattgaaaagctgactgtatggatgagtccttcaaatttgctttgcagaggtggattgacaggcgttgctggcagtctgaaaagcatatcaatttcactatgtgaagagctgtcggcatcatcagattgcgagggtctaacgactcttcctaaacttgaggagttaaacatttctggatgtgatgaactggagagattaccgctgggtatagaaaatcttactgcactcaaaagattgtcagttattggatgtcagaagtttcaaaatttaacagatttaaaggttggcactgctctgacttccctgcacatatcaagctgtccaatgctacaacagaaatccgtcccaatgcatttgagagggatcacaagttacgagtaa

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Protein seq

MSELEVYSLLQKMAAMRDGGDWPAGAELELQELYTVLEKVQRKVAHAVPLVDSRSSAAYSTFLADLRRVAFTVDDALDSYSASARRFPFRHKIRHTLTTIVEEMLSLLVPMMGFTIPILVRKIGSPGSSPLQPEQPSAPPLKLRPKIARRFEDAVKDVRMLLRLFSTYVADLLPPPEHQQPEPGLGADPDETWSLPDQEAVRGREQDMYKIRQILEHPGTKVVAIVGMAGVGKTELTRHLLNDKSSATTHGFNYSLWVPVSQDFNPEWIYRQVISKLSVQLKAGEDAESFWWSLNSDLNEGLINKKHLLVLDGVWNEDPRKWKELMDLLYGNCTQKTKIIVTTRIPAAAAAISSAVIYHLHPFSVEHTLEMLQTINGELPEKLLGGGSSNATVSTAAAKELSKRKVAERCSGLPTIIKFLSSSLESICANEVADPLKQFDMMCAGNQGLLHIAEASYNHLPPHLKRCFLYCSLFPYHHIFDIDEMISLMVAEGLTQTTSREAQVDGDISRLLSECFDLVNNPGSNGGNRRGCMMHRVLHILARHKGQELYKAIVGDHSAALKEHSNIRYMSLTVDHTTTELPGSLTAHTDLRTLILLRTQKMVLSGQKSEIKEIPSDYCRYLTYLRVLDLQATKINKLPEKVEMLSNLRYLNLSQTDIDKLPESIGRLQYLVSLNISQTCIATVPDYIGKIHSLRYLNLSQTDIGKLPDSICSLRLLQTLQLSRCEKLTKLPQNIGSVTSLQRLDLEGCYYLSEMPQDISNLKNVKELNVLECPSLDKMPCGLSALTKIEALPRYIATSGDNNPILELRDLVKLKRLGLENIANISNEDAEKIQLQKKHELEHLTLHCKQHREVEAERGKSSSEVKELLDHLEPNPELKTLKIISYEGEEFPCWMANTNLKKLTQVRIIRLINLKCKSLPPLGQLPHLETLEISGMGEIREVSSELNGHVDDTFHSLKKITFSQMVNLECWPVNGAKCENLKELSIIQCPKFHNLSMNLEIEKLTVWMSPSNLLCRGGLTGVAGSLKSISISLCEELSASSDCEGLTTLPKLEELNISGCDELERLPLGIENLTALKRLSVIGCQKFQNLTDLKVGTALTSLHISSCPMLQQKSVPMHLRGITSYE

Function Putative disease resistance RPP13-like protein 1 [UniProtKB/Swiss-Prot:Q9LRR4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_11g0021120 OsLiXu_11g0021120.01 Chr11 28503187 28506567 + NAM
CDS seq

atgtcggagctggaggtgtatagcttgctgcagaagatggcggcgatgagggacggcggcgactggccggccggtgcggagttggagttgcaggagttgtacaccgtcctcgagaaggtgcagcgcaaggtggctcacgcggtgccgctggtagacagccgcagctccgccgcctactccaccttcctcgcggacctccgccgcgtcgcgttcaccgtcgacgacgccctcgacagctactccgccagcgcccgccgcttcccgttcaggcacaaaatccgccacaccctcaccaccatcgtcgaagagatgctctcactattagtcccgatgatggggttcacaatacccattctcgttcgcaagattggctcgcccggttcgtctcctctgcagccggaacagccttcggcgccgccgctaaagctgcgccccaagatcgctagacggttcgaagatgccgtgaaggacgtgaggatgcttctccgcctcttcagtacctacgtcgccgatctcctgccgccgccggagcaccagcagccagagcctggtctcggcgctgaccccgacgaaacgtggtctcttcccgatcaagaagctgtcagaggaagagaacaggacatgtataaaatacggcagatcctcgaacatcctggaacgaaagtggtcgcaattgtaggaatggccggggtcgggaagacggagctcaccaggcatctgctgaacgacaagagtagtgctactacgcatggcttcaactactctctttgggttccagtgtcccaagatttcaatccagaatggatttatcggcaggtgatttctaagctgagcgttcaattgaaggcaggcgaagatgctgaaagcttctggtggtctctaaattcagatctaaatgaaggcttgatcaataagaagcatctgcttgtgctcgatggcgtctggaacgaagaccctcgtaagtggaaggaactgatggatctcctctacggcaattgcacgcaaaagaccaaaatcatcgtcactaccaggattcctgcagcggctgctgctataagctctgcagtaatctaccacctgcacccgttctcggtggagcataccttggagatgctccaaacgatcaatggggagctgcctgagaagttgctcggcggtggcagtagcaacgctaccgtgtctactgctgcggctaaagaattgagtaagaggaaggtcgcagagagatgcagcggtttgcccaccatcataaagttcttgagctcttctcttgaatctatctgtgcaaacgaggttgctgatccactaaaacagtttgatatgatgtgtgctggcaaccaaggactgctgcacatcgctgaggccagctataaccatcttccaccacatctgaagcggtgcttcctctactgctccttgttcccatatcatcacatctttgatattgacgagatgattagcctgatggttgctgaaggtttaacacagactacaagcagggaggcccaagtggatggtgatatcagcaggcttctgagtgaatgctttgatcttgtcaataatcctgggtctaatgggggaaacagaagaggatgcatgatgcatcgagtattgcacatccttgcacggcacaaagggcaagaactatataaagctattgtgggtgatcattctgctgctttgaaagaacattccaatatcagatatatgtctctcacagttgatcatacaactacggagctcccagggtcgctgactgcgcacacagatttgaggacgctgatcctactcagaacgcagaagatggtcttgtctggtcagaagtctgaaatcaaagagatcccttctgattactgccgctatctcacatacttgcgtgtattggacctgcaggcaaccaagatcaataagttgcctgagaaagtcgaaatgctctcaaatctgaggtatctgaacctttcccaaaccgatattgacaaactgcctgaatcaattggcagacttcagtacctggtatccctcaacatttctcaaacatgcattgcgacagttccagattatattggcaaaattcactctttgaggtacctcaatctttcacaaactgatattggaaaactgcctgattcaatttgttcgctccgactgttgcaaaccttgcagctatcacgctgtgaaaagcttaccaaactaccacaaaatataggatccgtgacaagtttacaaaggttagacctagaaggttgctactatctatccgagatgcctcaggatataagcaacttgaaaaatgtgaaggagctaaatgtactggaatgtccctcactggataaaatgccttgtgggctgagtgcactaaccaagattgaagcattgccaaggtacattgcaaccagtggtgacaacaatcccatattggagctgcgggatttggtaaaattgaaaagactgggtttggaaaacattgcaaatatttccaatgaggatgccgagaaaatacaactgcaaaagaaacatgagctcgagcatttgacactgcattgcaaacagcatcgagaagtggaggctgaaagaggtaaatcaagttctgaagtgaaggagctactggaccatctagagcccaatccagagctgaaaacactcaagatcatttcctatgaaggggaagagttcccgtgctggatggccaacacaaatctaaaaaagctcactcaagtcagaatcatcagattgattaatctgaagtgtaagagtctcccaccgcttgggcagctacctcatcttgagactctagagattagtggaatgggggagataagggaagtcagcagtgagctaaacggtcacgttgatgatacattccattctctgaagaagatcaccttttctcagatggtgaacctagaatgttggccggtaaatggggctaaatgtgagaatcttaaagagttgtcaattatccaatgccccaaattccacaacctgtcgatgaatcttgaaattgaaaagctgactgtatggatgagtccttcaaatttgctttgcagaggtggattgacaggcgttgctggcagtctgaaaagcatatcaatttcactatgtgaagagctgtcggcatcatcagattgcgagggtctaacgactcttcctaaacttgaggagttaaacatttctggatgtgatgaactggagagattaccgctgggtatagaaaatcttactgcactcaaaagattgtcagttattggatgtcagaagtttcaaaatttaacagatttaaaggttggcactgctctgacttccctgcacatatcaagctgtccaatgctacaacagaaatccgtcccaatgcatttgagagggatcacaagttacgagtaa

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Protein seq

MSELEVYSLLQKMAAMRDGGDWPAGAELELQELYTVLEKVQRKVAHAVPLVDSRSSAAYSTFLADLRRVAFTVDDALDSYSASARRFPFRHKIRHTLTTIVEEMLSLLVPMMGFTIPILVRKIGSPGSSPLQPEQPSAPPLKLRPKIARRFEDAVKDVRMLLRLFSTYVADLLPPPEHQQPEPGLGADPDETWSLPDQEAVRGREQDMYKIRQILEHPGTKVVAIVGMAGVGKTELTRHLLNDKSSATTHGFNYSLWVPVSQDFNPEWIYRQVISKLSVQLKAGEDAESFWWSLNSDLNEGLINKKHLLVLDGVWNEDPRKWKELMDLLYGNCTQKTKIIVTTRIPAAAAAISSAVIYHLHPFSVEHTLEMLQTINGELPEKLLGGGSSNATVSTAAAKELSKRKVAERCSGLPTIIKFLSSSLESICANEVADPLKQFDMMCAGNQGLLHIAEASYNHLPPHLKRCFLYCSLFPYHHIFDIDEMISLMVAEGLTQTTSREAQVDGDISRLLSECFDLVNNPGSNGGNRRGCMMHRVLHILARHKGQELYKAIVGDHSAALKEHSNIRYMSLTVDHTTTELPGSLTAHTDLRTLILLRTQKMVLSGQKSEIKEIPSDYCRYLTYLRVLDLQATKINKLPEKVEMLSNLRYLNLSQTDIDKLPESIGRLQYLVSLNISQTCIATVPDYIGKIHSLRYLNLSQTDIGKLPDSICSLRLLQTLQLSRCEKLTKLPQNIGSVTSLQRLDLEGCYYLSEMPQDISNLKNVKELNVLECPSLDKMPCGLSALTKIEALPRYIATSGDNNPILELRDLVKLKRLGLENIANISNEDAEKIQLQKKHELEHLTLHCKQHREVEAERGKSSSEVKELLDHLEPNPELKTLKIISYEGEEFPCWMANTNLKKLTQVRIIRLINLKCKSLPPLGQLPHLETLEISGMGEIREVSSELNGHVDDTFHSLKKITFSQMVNLECWPVNGAKCENLKELSIIQCPKFHNLSMNLEIEKLTVWMSPSNLLCRGGLTGVAGSLKSISISLCEELSASSDCEGLTTLPKLEELNISGCDELERLPLGIENLTALKRLSVIGCQKFQNLTDLKVGTALTSLHISSCPMLQQKSVPMHLRGITSYE

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.072209 0.0 0.433110

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0640300 RBH 0.348590 0.241199 2.485782
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g42070 RBH 0.276758 0.163004 0.578039
Nipponbare | IRGSP 1.0 | RAP-db Os11g0640300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0021560 RBH 0.355755 4.291823 4.107610
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0021510 RBH 0.285429 2.602148 1.937679
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0021400 RBH 2.290494 1.956714 5.089375
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0020870 RBH 0.018045 0.182074 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0021400 RBH 0.0 2.192442 0.357784
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0381700 RBH 0.846561 4.6063575 8.7330505
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0021940 RBH 0.0 0.040169 0.215853
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0401700 RBH 1.9996505 6.361667 9.36111
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0021770 RBH 0.048357 0.107816 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0021870 RBH 0.160953 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0021520 RBH 1.393508 5.479032 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0021280 RBH 0.132961 1.563326 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G021250 RBH 0.0 0.562846 0.281622
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0021760 RBH 0.0 0.000000 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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