Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_11g0016810 OGI:11061260 | 16/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr11:23622797-23632622
Gene Symbol RLCK331, OsRLCK331
DNA seq

ctagagacacgcaatgcatagcttgcactgccactgccctaaggctcttgctaagttgccccagtggctggtgctcatccggcatctgctacttcctgtggggtgtatggctgcacgaggtgcgaccatggtgaggtgcgagaagcctcccagcaccaccacacggtagttcttcctggatctctcattctcattctctatcagacagtggaaatttgaaacaaaagctgtcctcttccttgtttagtactcctattttagtcaggtgtttgattcgggtggatgaattaaaatttagaggcatgggcaacttaatgctatctttattatcaatcaatcatatcctaatggggcatttgcttatttgaccctattttaaaacctaactaccaatttgaccctactttttctagtttgcttatttgaccctgcttttcgaaaacgaacctgctatctgaccctattccgttaaagtgagttatcagtgttaagtcttcaccaaaactatcaacgaggttgatattgcccccttttaccttttttctagtgattaattccaagagaacaattccagaactgtacacatcattcctcggagtaaggcaccctttttgaagatatataggatccatgtaatcaatacttccttttacattcagtgtgtcgagtgatcccaccagaaagaagccttgacagtccaaaatccgatatttttgcggtaagattgtcatctaaaagtatgttggcaggcttaatatccccatgacataccaagctgccagtcgatagatgcatcgaatgcatgtggcacagtgcctgtgcacaccctatagcaatacccaatcttgtatccaatcgcatagcaacttttcggttgtgaagtattatgtcttcgaggtttccgttagatatatactctgttaccatcaatagactattttcccctctgcaatagccgatgagcttcactatgttcttgtggttgatttgactatggattcttacttcttccataaactcttgtatcagatctccccggatatatctcttcactgcaactagatcgtcatagtgaagaacccctctgtagacttctccgaagccaccttttccgatgagagtggtatagcccctagtaattgtttcaatctcatcttcggtgaaatttctgatgccattatccatgcctacgatatctctagcagtagcagcacacatattttcctgaaatttcagtttgtgccaatgacccgactataatcttgaaaacctgctccgcaaacaataatttaacacagcccacaataaggttcaaccattataatagttcaatttaccatggaatttgatcgttttatgcaaaactgagagtactttcctataggttctgaaccttagtttccagacaaaaacaaacaacttttatttagtcgatgtaaataagtactccatcttgtaaaggaaatgagatttttgtctaatctcgattaacgcaatgaaacaaatgtacaagacagagagattctaacaccccttccggcacaattccatagctctgacagtcagatacatcatacatgatacatgttcagagaaaagcaaggatggcgctagaaatgaatccacatacctattagcaccgcataccgcgcgccgccggcgatcaggacggagctcgccatcgatcggcctcgccttgttctaagctcggtagctcaagctcctgggaaaggtcgcagatgaacgcatttaattaattaatatatactgaggagcaatgcgatccacggatagatttatataatatatattggtcgctaatttcagttctatattcgagcggatcatggatgtgagattctttcacatgaagaaattcgcaaggatttgactccaaaaccccccttgttattgcaaggaatcaacggggtttataaattaaagcctcatcaagattgtattgagaacctcgaatcgtatggggggcgggggcactcgccgcaatcggatgaggagcaccgggccgcggcggccgacgcgggcgggaggaggcggacggtgaagaagatgttctctctccatcggcggcgggggcggcagtggagaatgcgatgctctcctccatgtccgggaggcggctgagcatcggcgcggcggcgatgaaaggaaggaaaaagtccaatttgactcccttaattgtacaccgaatctaattcgtaccccttaaccagaaaaccggataggacgactccccgaactaatgaaactagtgcaatttgactccctcagcggttttggagagcggttttgctgacgtggcgctgacgtggcagtgttgacccagtcttcgtcccacatggcgccgacgtggcattagaattaaaaaaaatcagtgggacccatctgtcattcacacaaaaaatactgtgggaccaactgacatgtggggtccacatgtcatcctctctccttccctccttcctcctccctctctcccctctctctttctctccccctctcttggtcggagtggcgacggcgacggcggcatgcgggcgagggccacagcggtagtgacggcggcatgcgggcgagggccacagcggtggtgacggtggcatgagggcaaggaccagagcggcggcgacaacggcatgtgggtgaggaccacatcggtggcgacagcggcatgcgggcgaggaccaaagcggcggcggcggcgggcaggaggcgggggatccaggcggcgttgttgctggaaccacgcccacgacggcgccgccagacgagcacggggagcttggtctcggcagtggcggcagagtagtcgaggcggaggagcatagagacgttgggggagatggtgcggtcatgggaggcggcgtcggtggagcacaatgccgccgagctcgtgtgcgccctcctcgccgttgtgatactcctctacctccatcgccgctaaccgaagcgccgccgccttccgaggctatcgccggtggtggagaagggaaaggggaaaggcggtgccaccgagatctcgcccaccctccgccaccgagctcgggagcgtcctccacgccgtcgagctactcctctacctccgccatcgcctgccgaagcgccgccgctgtccgagaagggagaagggagaggcagcgtagcggaaggggggaaggggacgcggacgacgatgacgacatggatatggcgaggtggagctggagggggtggtggacgctccagcgcccgcctcccgtacgccgccgatctgtctctagccccgcacgtacgccgccgttgccactccggcccccgcttgccgccaccatcgatccctgcgtgcgtccggaaggggggagagaaaagagagaagggagagagagagggaggaggaagaaggaaaggagaaggatgacatgtgggccccacatgctagtgggtcccacaatatattttgtgtgaataacagatgggtcccactgattttttttttcaattctagaaccatgtcagcgccacgtgggacgaagtccgggtcaacactgccacgtcagcgccacgtcagcaaaaccgccctccaaaaccgccgagggagtcaaattgcactggtttcattagatcggggagtcgttctatccggttttctggttaaggggtatgaattagattcagcgtacaatttaagaagtcaaattggatttttccggaaaggaaagctctcagttcagacaaaatcaaggcctacctaagcctgggctatcggagtagaggcctggccatggaataagtctaccagtatccctaaactttttcatcgagtttgttatatctcgaatcctcaatacgagaaatcttgaacccctccaatttttcataaccgtgcaacttaggccccctccaactgtatatccattcgggctgttaaaacagtttaccccccgtggtagtatagactccatttttccctgtgtttcgctgacgtggcagatgtccgagcccacttgccaggcacggtgcgtgcacggggagctacacatgcgccaccagctttcctcccgctgctgctgtgcgccggtgaagctgctgacgaacgtggagaagctgctgccgtcgtcttcctcgtccccgaggagtaccttgttagcggcaaccttgtagttgttcatttgaccattgcagaacagaactagctacagcaaaggagaaaacaaattactaaaagcagctagagttattccctatcatattcatacccctgggatcgaggtcgtcgtccaggccgtgattgcgctcgcctgcattattggtgactcccacccgtcatcgctgggcgaagccatggcagtcagccagtcaccgtggttcgaggcggcagtcgacgcatggcatgccttgccgcgcatcggcgcgctcgtagagcagctccggccggcctaccgtaggagtcgaagtgagggagcccagctcgtcggtgaagtcctcggagatgtcgatcgaggacctGggggcaaatgatgacacggttctgctcgacggtggagatccccgtggcctccttgatcgacgacggcgtgaacctctccctggtccctggatatatagcgcagagatgagcggcgcgtactcgtgccgcatcccgagctgatcccgcagcacgacaaaccgttgggtgaggttgagtgtcttatacttgttcaggagcggcaacgatgatgggtggaacgacagcagggtagagctggtcgggcgatctggccggtggggggctagcttgtagtcgtgtggcacgccatcgatgggactcccgtcgaggcccaggttgacgatggaggtcgtcaagtgaccgaagcggcgacggtggcgccggtggtaatgataataagagaggagcatatcatcttatctgctcttgtctcagagaggagaggaataatatcgggaatgctcattgcctggcgtccggcgcgggggagccggatcggacgctcccccagcgcgcccacccacttctctctcatttttccaacaaaaaaaaatgtttcacctagtgtatttatattgtttcactatttatagatccaatgttgcagtgaattgaacctacatattttttaaaatttggtttattttttttctacaaaaaatgttttcacctagagtactcagtgaacgaaatatttcattgcaacAaaaaaacccatatattttggaaaccccctattaagggaatttggtttattttttgttccaccgaaaaatgtttcacctagtagtattcataatgtttcactatttatagatctaatgttgcagtgaactgaaacattctttcgctatttgctgaaacattgtttttatataaggtgaaacaacacccgatttaaacgagtgaaacattttcgatctgcttagtgaaacaattccgaaatacctggtggaacatcgtgcaacatttaaaaataattcaataataagctaaaaaaattttttgtcggaatatatccatgtgtggtcttgttttgaagatttaattgtaacgaatttaatggtgcaatcggatcataatttggataagtaatttaagagaaaaatcagtttaaaatagttttgcacgtaaatcgcacgaccagcgcccgattttaacctgtttgcatcgggcacccgagctggaggcgttcccgaataatattagccctcatcctttgtgaaaactagggaaaatgggatctatactgttattgggaattagggatgtcaaacaaaccccgactgaaagttaagggatgacgagtgaacttattccttgctaccattggtccaaagcatgtaagcattccacccactgcggtatgggctatggcctagtagagcctagtttcggatagttggcgcagcccgtttagccccacctagatttacaggggtaataagtccactttatgccccttgctcttctttcaattaagtttaaatcttgtccctgaattctaatatAaaaaatcttgaaCcccggcttgcaaacccGggttaaattagatccttcggcagcacagatagtttggtttcgctaatgtggtaagtcaacctagtccactcgtgatgactaggcgttacatggcaaaaaacAaaaaatgggttcacatgtcatcctcacactcctcccctcttctctctccttcctcTttctctcccctctttcctctccatctctcgttcctccgatggtgaaggatgtgatgttgtcctcacatccatgcggcattgactcaccctagcaggaactcactggtaggtatatgtcAaaaggcgttcatcggccctgccatcttgcacccacctccctactattgtgcccctgccatcttgcactcacctccctactattgtgcccccctcccgtgtcgcagtgacaacttgatacgggcggagatgcccattagtctatagggcagccggtgatggaagatgaatcaaggcgtcggcaacctcatctcctctaagcggcggcgacaccgacacaaagctcgagtagtcgcctcatctcgtatccatcctatttcctaggtagcgcgtgtagtggcttcaccctgacgggctcaagcgatgacacctcatctcctctctgctccacagcggacattcgtgtacctggtccacacctaaggaggtgccctaggtgggctactccacctcccacctagaaggaccgccgtagcagcaacaacagctccgtcgccataggatggacacctagcatccgttccctgctatcgtggctgccatgtgtcggggatgtggtcaccatgttccgcctctatgcacgtccgacactgccgaagtgtctgatcgcttcttcgtcgactacggctacgactactttccccatctgtgcaaagatctgcctttccttctcctctaccggcgtcggcgccttcAccaccttcctccgtagacattgccatgcccacgctcaatatcacagtgcaatggcggctacgaatctcgagctcgagctcgcgcgggggataggggtggcggggaggcacctcggtatcctcctaccctttcccaagctggccttgccctccacttgctccttcccaaccggtcaccgccatgaggaagagaGgggagagatggagagactagagatgcggagggatgttaaaggaagaatataggagactaacatgtggggcccacgtgcatccctcactaactcaaccggGttgcatgcagtcaactcaccatgtcaatgaaaccagccatccatactaccaccaaacctaatttaatctagttttgcaagttggcagtgagggagcgttatgatttccaatattgcagtttaggatatgatttcaactcgtcagaaaaacgagggatgtaatgttgagttattccttttacagggtagatacccaattcagctcacgcaaatttggatcaaaacatgcgtaagattacatgagtaagtatggtgcaattggcctcaatttgccaaccactctgtgggccgatttagcctggctaacagatacaatgcttggcccatttaggccatttcacccccatctgtttttggatacaaaacctgcaagaggcacatgaggaagcaGggaggccggcggtggcgaggggaggagcttcccaatcgacgaagccattggcctcctccggcaaactagaatagcctcatgccactagtctcctctacatcgctgcctgctcagctactagattggggccggtgctaaggggaaatgtttggcaacgtcaagagatatcgagctcggaggatggcaccaccttcgatcccctcgctgatgccatcgtcttcgtccttgtcaatgcccagatcattagggaggagcacgtgggagaagtaggatgtgaAGagagagggagcggaacagagggaggataacacgtgagttccactgattttttaaacaatttttccgagaaacttacacgtgactatatgagtctgtctagttttaaTtttttttattattactgtgatgccacttaaacgccacataggctccacattgcatgaatactaggtcaacgtgtcatattggtatcagtcgttttgggggtcaatttgcactgattttaaaaattAagggagcctatataccatgtttttgtgacatggcgtgaattaaactcaaccaatacggaaggtaggtaaaatggacttttccatccaccatttggttacctatccaacttggccacggcggtctctagaaagcctcgaggctcAagagagccacggtatcataatgctgcacgggcgatctccgtatcttgtgaccactctaaatctgagtatttctaactctagaaatataagtatctagaattgtaattatgttgataacatttagataaatcattttatctctattttagataaagtttaaaattttaaaaactataatttaacatacaagcttcaaatctatcgtggatctgaaatctaaagtgttgtcaaccaggagctaaatactggcaaaatgatgcaccagtgcgccagctacacttttctccacatctaTttttgtccatgaaaatagcacgcacgcaagttggttcagacaacaccacacaatcttcaacatgttaacatccaacgaacaataaatacAaaagccatctcttaggcaaaaggacgagtgattatagataccggttcttaatttgatatagttaaagtgctcacttacacaaaaattctgttataggtaccgatttcaagtgaactgatacttgttagggtgttacggatgtgatgttttgtactaatgatagatggtatgacgttgttaccagatcacgcactccctctaagcttcatccaaatatataaataatccgaatgcttctacctttatttaaggctataatgtagatgtacttggctagctttaaaggacatacaaaagcgtgtttcatcataacttgcatggtttaaaacagacacgaatattatggaaggacataatatcaaataattagaaGgggtaaagcttcgaaccaaggtcctctagctccaccatcttgtggagctagctggaagacgcctaagacgtttctcataacttatatggttttacttaacttttttcttaaatgaatgatgctcttgattttgtggatgtaatgttctttcgggaggaaatatatgaacatttgaccattattctattctaaaatttaatgcaaatatcttaaaaacataagtaatactcaaagtaactttaatgataaaacaggttgggacaaaataaatattacttacatattctttcaagaaaatgaatacttatatAaaaATTTTAATGAAACGGATAGTCCAACTTCATATCCGATGGTCAACAATTAACAGCAAGCATTTAAAAACGGAATGGAGGTGGTACACTGGTACCAATTGTAACCTCAATATGGTTGGCTATAATGACTTCCTCCATGCATATGTATGTGCATCGTGGTATTCTACGGCCGAATCGAAGTTCTGACTTCTGAGCAACTCAAGGCGTTCTGCCACTTCCGCCATTGTTGGCCTTCCATCTTCTTCCGGGCTCACACACCTCACTGCCATCCTTCCCATCTCCTCAAGTATGGCCATCCTATCCTCTTGATCTCCTGTGATGGACAGATGGAACATTCTCTCTCCACTATCTTCTGCCTCATAAGCTTGGATGAATTCAGAAACAAAGTTGTGATCTTTAGGCATTCTCCCTCTGATGAGTACCATCAGAATGACACCAAAGCTGTACACGAAACTTTCGTTCTTTGCAATCCCGGTTTGCAT

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CDS seq

ATGCAAACCGGGATTGCAAAGAACGAAAGTTTCGTGTACAGCTTTGGTGTCATTCTGATGGTACTCATCAGAGGGAGAATGCCTAAAGATCACAACTTTGTTTCTGAATTCATCCAAGCTTATGAGGCAGAAGATAGTGGAGAGAGAATGTTCCATCTGTCCATCACAGGAGATCAAGAGGATAGGATGGCCATACTTGAGGAGATGGGAAGGATGGCAGTGAGGTGTGTGAGCCCGGAAGAAGATGGAAGGCCAACAATGGCGGAAGTGGCAGAACGCCTTGAGTTGCTCAGAAgttcagaacctataggaaagtactctcagttttgcataaaacgatcaaattccatggaaaatatgtgtgctgctactgctagagatatcgtaggcatggataatggcatcagaaatttcaccgaagatgagattgaaacaattactaggggctataccactctcatcggaaaaggtggcttcggagaagtctacagaggggttcttcactatgacgatctagttgcagtgaagagatatatccggggagatctgatacaagagtttatggaagaagtaagaatccatagtcaaatcaaccacaagaacatagtgaagctcatcggctattgcagaggggaaaatagtctattgatggtaacagagtatatatctaacggaaacctcgaagacataatacttcacaaccgaaaagttgctatgcgattggatacaagattgggtattgctatagggtgtgcacaggcactgtgccacatgcattcgatgcatctatcgactggcagcttggtatgtcatggggatattaagcctgccaacatacttttagatgacaatcttaccgcaaaaatatcggattttggactgtcaaggcttctttctggtgggatcactcgacacactgaatgtaaaaggaagtattga

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Protein seq

MQTGIAKNESFVYSFGVILMVLIRGRMPKDHNFVSEFIQAYEAEDSGERMFHLSITGDQEDRMAILEEMGRMAVRCVSPEEDGRPTMAEVAERLELLRSSEPIGKYSQFCIKRSNSMENMCAATARDIVGMDNGIRNFTEDEIETITRGYTTLIGKGGFGEVYRGVLHYDDLVAVKRYIRGDLIQEFMEEVRIHSQINHKNIVKLIGYCRGENSLLMVTEYISNGNLEDIILHNRKVAMRLDTRLGIAIGCAQALCHMHSMHLSTGSLVCHGDIKPANILLDDNLTAKISDFGLSRLLSGGITRHTECKRKY

Function Probable serine/threonine-protein kinase PBL28 [UniProtKB/Swiss-Prot:Q84M95]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_11g0016810 OsLiXu_11g0016810.02 Chr11 23622797 23623428 - NAM
CDS seq

atggatcctatatatcttcaaaaagggtgccttactccgaggaatgatgtgtacagttctggaattaatgagaatgagagatccaggaagaactaccgtgtggtggtgctgggaggcttctcgcacctcaccatggtcgcacctcgtgcagccatacaccccacaggaagtagcagatgccggatgagcaccagccactggggcaacttagcaagagccttagggcagtggcagtgcaagctatgcattgcgtgtctctag

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Protein seq

MDPIYLQKGCLTPRNDVYSSGINENERSRKNYRVVVLGGFSHLTMVAPRAAIHPTGSSRCRMSTSHWGNLARALGQWQCKLCIACL

Gene Transcript Chromosome Start End Strand Source
OsLiXu_11g0016810 OsLiXu_11g0016810.01 Chr11 23623433 23632622 - NAM
CDS seq

ATGCAAACCGGGATTGCAAAGAACGAAAGTTTCGTGTACAGCTTTGGTGTCATTCTGATGGTACTCATCAGAGGGAGAATGCCTAAAGATCACAACTTTGTTTCTGAATTCATCCAAGCTTATGAGGCAGAAGATAGTGGAGAGAGAATGTTCCATCTGTCCATCACAGGAGATCAAGAGGATAGGATGGCCATACTTGAGGAGATGGGAAGGATGGCAGTGAGGTGTGTGAGCCCGGAAGAAGATGGAAGGCCAACAATGGCGGAAGTGGCAGAACGCCTTGAGTTGCTCAGAAgttcagaacctataggaaagtactctcagttttgcataaaacgatcaaattccatggaaaatatgtgtgctgctactgctagagatatcgtaggcatggataatggcatcagaaatttcaccgaagatgagattgaaacaattactaggggctataccactctcatcggaaaaggtggcttcggagaagtctacagaggggttcttcactatgacgatctagttgcagtgaagagatatatccggggagatctgatacaagagtttatggaagaagtaagaatccatagtcaaatcaaccacaagaacatagtgaagctcatcggctattgcagaggggaaaatagtctattgatggtaacagagtatatatctaacggaaacctcgaagacataatacttcacaaccgaaaagttgctatgcgattggatacaagattgggtattgctatagggtgtgcacaggcactgtgccacatgcattcgatgcatctatcgactggcagcttggtatgtcatggggatattaagcctgccaacatacttttagatgacaatcttaccgcaaaaatatcggattttggactgtcaaggcttctttctggtgggatcactcgacacactgaatgtaaaaggaagtattga

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Protein seq

MQTGIAKNESFVYSFGVILMVLIRGRMPKDHNFVSEFIQAYEAEDSGERMFHLSITGDQEDRMAILEEMGRMAVRCVSPEEDGRPTMAEVAERLELLRSSEPIGKYSQFCIKRSNSMENMCAATARDIVGMDNGIRNFTEDEIETITRGYTTLIGKGGFGEVYRGVLHYDDLVAVKRYIRGDLIQEFMEEVRIHSQINHKNIVKLIGYCRGENSLLMVTEYISNGNLEDIILHNRKVAMRLDTRLGIAIGCAQALCHMHSMHLSTGSLVCHGDIKPANILLDDNLTAKISDFGLSRLLSGGITRHTECKRKY

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0553500 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g35120 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os11g0553500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0017200 SBH 0.0 3.037357 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0017280 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0017140 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0016780 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0017070 RBH 0.460573 2.667517 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0322900 SBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0017560 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0332200 SBH 0 0 0.0092155
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0017410 SBH 0.0 0.046933 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0017430 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0016950 RBH 0.922729 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0072030 SBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0016990 SBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G016930 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0017270 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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