Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_11g0004070 | OGI:11008990 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr11:2993445-2996811 | ||||||||
| Gene Symbol | WNK6, OsWNK6 | ||||||||||
| DNA seq | tgtagcaaattttgccttttatttatagatgtgcacaagatctcgaagcagttctagccatccaaaagtgatggatagataagaaaaggaaaagaacaagtgatggaacatcatatctggatacagcattggcagcaccgttatcctatgcaggaattcacatacaggctacaacagctaaaatcaagaattcatcgactctattaagaactcttccctagcagtaattctgtacaaattttctcaatcgtcagtgaaaaccacggcgctgagatttgagcatgcaccaaggagaatgaaccatattctgcatgccaccgaaatggggaaaactggacaactcactccctaggaagaacttggcaacatctttccaactttaacacagggtttccaactgggcaaaatgtgtagtaagaaggcgtctatcaactcggccaagacagggttgttccattcaggcagctcaagctgctcaaccatttcagtggacaccgacaggctggtatctttctccatgtcaaaggggaactgaacattcttgaacttacctgcaaaaagaaattataaatttaagtcagttttgttgttcgaaaagacagaaactaagttgcattcaaatcctaagaggctaagatgtcattttgatgcttattattttaccatcaggaccagggaatcgcagaaacagcatgacagggttggtggtgctcatgttcccttccaacaaaaaatcactcttctgaagcaccaagatgaaagattgctccttcccattgactgtcccattattcggcgccagagagacaaaaattggttcatctttagtaaaattgttttcagggaattttactggttcttgaactgaattggagcttctgtgattggcatcatcactctgaagaaaagggctcttcaagagctcacttgcaggcaacctgtcagatactgaagctagacagctctcaatgaagcctctcacttctgcgtctttgactttggagagagcagctggctttacaccctgaagagttacagcgccatgaatattgatgtagaagagttatatgtttagctaccagaatcgtagaagtaggtatatgtatgaatgctgtatatagaaggccacttacttcagtaatcttcttgtatatctgaataaagcccttgcattcactgtatgggcattcacaagtcaccatctccagcatgcacattccaaaagaatatatatcgaccagctcattgtaattttcaccaaaaagctctggtgccatgaattctatggtgcctgtatttaacaagagtaattgtcgattcatgttttacttgaagataaagaagaaaattcaagaaagcatagaagacagccgtctccagtccttgtaattaatttacttgtaattattgtggcctttgtggagcagttcaccgaccttgtatactccgtgttttcctttgctgcatcaccattgctaaaccaaagtctccaatcttcactttcccatggttcccgttaatgaaaatgttgtcacacttcaagtccctatgtatgattggtggcttctgactgtgtagatattccaaccctgtcagtatttgctttgcccatcgtctcattgctttcatgtcaacctttttgtgctttgtacggtacctagtcatatcataggctgtgtttagttcagcgcaaagtttggattttagttgaaattggagatgattagttgaaattggagatgatgtgactgaaaagttgtgtgtgtatgacaggttgatgtgatagaaaatgactgaagtttggatacaaactttggatctaaacacagccatagtgtcaaagatatttcaaatattgaatgggcaaattatgcattcatctagtggagtgaaaacaaaagaaatatgtaacgttaagccaaatagccaattaattttattatgctgtattcattttcttctaaataaaagcccaaacgatcggtgatgcatgaaaacaaagccctaatcataaaacacaattgaacttttttttgcttatctgatgtactctactctctctatcctaaattttaaggcctataagtttttacactttgaccactaatttctttcataatatgttataataactataaaatcagcatcatatgaaagtattttaaaatatagatctaacgatatgatatacatgacattaagcatatatattattagcataattatttatcaaaagtaccaaaggttgatttttactaacaataaggatgccctaaattttagaacagatggagtagttttataccattgttccaaagaaggtggatatgaatgtagaaccaataaaacctactcataaacggaaaataaattaaaacccccgctttaaaaaaataagaaaaaagaaatagaatagtgttgtagcaagaatgagagaggaatggcaggtgtggcatataaatacatactctctcaaattaccagatgtgaacagctcagtgacaatgttaaccgtccttctgttagtgtcgacccaggatgcgtagagcttgaggatgtgcttgtgctgcagcgatttcagcagctggatctccgtgcgaagccgctgcaattccttggatgaacccatgattctctcgtttatctccaccttgccccatgccacctcgatgccatccaccgcatcaaatgccttgtagctgcatatcacatataattaccaacatagtatatcatgtcaatgaacactgttgcaatgtacttcggttttttcagttttcggtttttttctccctttagctcccctggcaatggcagttcgactggttgcgttgtgtaattgaaaccttgctttcttctaattataaaaaacggttacaatgctttcttgttcatatcccgtgaaaaggcaatcatcttattaggccctatttgcaatgcagaaatttcatgatccgttcgtcccaaacaatctaaaatcattttctaagatatttagggtgtgttttattctacatgttaccaatgttttccgtacgcatggttctgaaataattaaccgagaagtgtaacaatcgaggagagggagagattggaagcattacactgtcttggaggatcctgatccgatgatctccctgtactgtcattacgcgcgaaatcaatcagccaaatcagaagaacaaactaaactaatccagcataaacctcgccaaaaaataaaaaaaaaatcaaaacatggaagaacgctcgcacggacccgaaggtagcggccggtggggtcggcctcggcgacgtcggggtcctcgtccggcggctccggctgctcgtcggcgacgtcctccgcagccggcttcggaggcatcat
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| CDS seq | atgcctccgaagccggctgcggaggacgtcgccgacgagcagccggagccgccggacgaggaccccgacgtcgccgaggccgaccccaccggccgctaccttcggtacagggagatcatcggatcaggatcctccaagacagtctacaaggcatttgatgcggtggatggcatcgaggtggcatggggcaaggtggagataaacgagagaatcatgggttcatccaaggaattgcagcggcttcgcacggagatccagctgctgaaatcgctgcagcacaagcacatcctcaagctctacgcatcctgggtcgacactaacagaaggacggttaacattgtcactgagctgttcacatctggtaatttgagagagtataagccaccaatcatacatagggacttgaagtgtgacaacattttcattaacgggaaccatgggaaagtgaagattggagactttggtttagcaatggtgatgcagcaaaggaaaacacggagtatacaaggcaccatagaattcatggcaccagagctttttggtgaaaattacaatgagctggtcgatatatattcttttggaatgtgcatgctggagatggtgacttgtgaatgcccatacagtgaatgcaagggctttattcagatatacaagaagattactgaaggtgtaaagccagctgctctctccaaagtcaaagacgcagaagtgagaggcttcattgagagctgtctagcttcagtatctgacaggttgcctgcaagtgagctcttgaagagcccttttcttcagagtgatgatgccaatcacagaagctccaattcagttcaagaaccagtaaaattccctgaaaacaattttactaaagatgaaccaatttttgtctctctggcgccgaataatgggacagtcaatgggaaggagcaatctttcatcttggtgcttcagaagagtgattttttgttggaagggaacatgagcaccaccaaccctgtcatgctgtttctgcgattccctggtcctgatggtaagttcaagaatgttcagttcccctttgacatggagaaagataccagcctgtcggtgtccactgaaatggttgagcagcttgagctgcctgaatggaacaaccctgtcttggccgagttgatagacgccttcttactacacattttgcccagttggaaaccctgtgttaaagttggaaagatgttgccaagttcttcctag
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| Protein seq | MPPKPAAEDVADEQPEPPDEDPDVAEADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQKSDFLLEGNMSTTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEWNNPVLAELIDAFLLHILPSWKPCVKVGKMLPSSS |
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| Function | Probable serine/threonine-protein kinase WNK6 [UniProtKB/Swiss-Prot:Q2RA93] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_11g0004070 | OsLiXu_11g0004070.01 | Chr11 | 2993445 | 2996811 | - | NAM | ||
| CDS seq | atgcctccgaagccggctgcggaggacgtcgccgacgagcagccggagccgccggacgaggaccccgacgtcgccgaggccgaccccaccggccgctaccttcggtacagggagatcatcggatcaggatcctccaagacagtctacaaggcatttgatgcggtggatggcatcgaggtggcatggggcaaggtggagataaacgagagaatcatgggttcatccaaggaattgcagcggcttcgcacggagatccagctgctgaaatcgctgcagcacaagcacatcctcaagctctacgcatcctgggtcgacactaacagaaggacggttaacattgtcactgagctgttcacatctggtaatttgagagagtataagccaccaatcatacatagggacttgaagtgtgacaacattttcattaacgggaaccatgggaaagtgaagattggagactttggtttagcaatggtgatgcagcaaaggaaaacacggagtatacaaggcaccatagaattcatggcaccagagctttttggtgaaaattacaatgagctggtcgatatatattcttttggaatgtgcatgctggagatggtgacttgtgaatgcccatacagtgaatgcaagggctttattcagatatacaagaagattactgaaggtgtaaagccagctgctctctccaaagtcaaagacgcagaagtgagaggcttcattgagagctgtctagcttcagtatctgacaggttgcctgcaagtgagctcttgaagagcccttttcttcagagtgatgatgccaatcacagaagctccaattcagttcaagaaccagtaaaattccctgaaaacaattttactaaagatgaaccaatttttgtctctctggcgccgaataatgggacagtcaatgggaaggagcaatctttcatcttggtgcttcagaagagtgattttttgttggaagggaacatgagcaccaccaaccctgtcatgctgtttctgcgattccctggtcctgatggtaagttcaagaatgttcagttcccctttgacatggagaaagataccagcctgtcggtgtccactgaaatggttgagcagcttgagctgcctgaatggaacaaccctgtcttggccgagttgatagacgccttcttactacacattttgcccagttggaaaccctgtgttaaagttggaaagatgttgccaagttcttcctag
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| Protein seq | MPPKPAAEDVADEQPEPPDEDPDVAEADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQKSDFLLEGNMSTTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEWNNPVLAELIDAFLLHILPSWKPCVKVGKMLPSSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0160300 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g06140 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0160300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004180 | RBH | 0.0 | 0.0 | 0.266077 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004250 | RBH | 0.0 | 0.0 | 1.008895 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004170 | RBH | 0.0 | 0.0 | 1.904511 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0004100 | RBH | 0.0 | 0.037186 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004080 | RBH | 0.0 | 0.0 | 2.212832 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0051300 | RBH | 0.014362 | 1.03863 | 0.0587225 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004170 | RBH | 0.0 | 0.083802 | 0.193174 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0051600 | RBH | 0.0146305 | 0.683278 | 0.403519 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004170 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004170 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0004350 | RBH | 0.870185 | 0.0 | 3.415759 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004190 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004150 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004150 | RBH | 0.0 | 0.0 | 3.050363 |
