Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsARC_11g0004100 | OGI:11008990 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr11:2983092-2986458 | ||||||||
Gene Symbol | WNK6, OsWNK6 | ||||||||||
DNA seq | TGTAGCAAATTTTGCCTTTTATTTATAGATGTGCACAAGATCTCGAAGCAGTTCTAGCCATCCAAAAGTGATGGATAGATAAGAAAAGGAAAAGAACAAGTGATGGAACATCATATCTGGATACAGCATTGGCAGCACCGTTATCCTATGCAGGAATTCACATACAGGCTACAACAGCTAAAATCAAGAATTCATCGACTCTATTAAGAACTCTTCCCTAGCAGTAATTCTGTACAAATTTTCTCAATCGTCAGTGAAAACCACGGCGCTGAGATTTGAGCATGCACCAAGGAGAATGAACCATATTCTGCATGCCACCGAAATGGGGAAAACTGGACAACTCACTCCCTAGGAAGAACTTGGCAACATCTTTCCAACTTTAACACAGGGTTTCCAACTGGGCAAAATGTGTAGTAAGAAGGCGTCTATCAACTCGGCCAAGACAGGGTTGTTCCATTCAGGCAGCTCAAGCTGCTCAACCATTTCAGTGGACACCGACAGGCTGGTATCTTTCTCCATGTCAAAGGGGAACTGAACATTCTTGAACTTACCTGCAAAAAGAAATTATAAATTTAAGTCAGTTTTGTTGTTCGAAAAGACAGAAACTAAGTTGCATTCAAATCCTAAGAGGCTAAGATGTCATTTTGATGCTTATTATTTTACCATCAGGACCAGGGAATCGCAGAAACAGCATGACAGGGTTGGTGGTGCTCATGTTCCCTTCCAACAAAAAATCACTCTTCTGAAGCACCAAGATGAAAGATTGCTCCTTCCCATTGACTGTCCCATTATTCGGCGCCAGAGAGACAAAAATTGGTTCATCTTTAGTAAAATTGTTTTCAGGGAATTTTACTGGTTCTTGAACTGAATTGGAGCTTCTGTGATTGGCATCATCACTCTGAAGAAAAGGGCTCTTCAAGAGCTCACTTGCAGGCAACCTGTCAGATACTGAAGCTAGACAGCTCTCAATGAAGCCTCTCACTTCTGCGTCTTTGACTTTGGAGAGAGCAGCTGGCTTTACACCCTGAAGAGTTACAGCGCCATGAATATTGATGTAGAAGAGTTATATGTTTAGCTACCAGAATCGTAGAAGTAGGTATATGTATGAATGCTGTATATAGAAGGCCACTTACTTCAGTAATCTTCTTGTATATCTGAATAAAGCCCTTGCATTCACTGTATGGGCATTCACAAGTCACCATCTCCAGCATGCACATTCCAAAAGAATATATATCGACCAGCTCATTGTAATTTTCACCAAAAAGCTCTGGTGCCATGAATTCTATGGTGCCTGTATTTAACAAGAGTAATTGTCGATTCATGTTTTACTTGAAGATAAAGAAGAAAATTCAAGAAAGCATAGAAGACAGCCGTCTCCAGTCCTTGTAATTAATTTACTTGTAATTATTGTGGCCTTTGTGGAGCAGTTCACCGACCTTGTATACTCCGTGTTTTCCTTTGCTGCATCACCATTGCTAAACCAAAGTCTCCAATCTTCACTTTCCCATGGTTCCCGTTAATGAAAATGTTGTCACACTTCAAGTCCCTATGTATGATTGGTGGCTTCTGACTGTGTAGATATTCCAACCCTGTCAGTATTTGCTTTGCCCATCGTCTCATTGCTTTCATGTCAACCTTTTTGTGCTTTGTACGGTACCTAGTCATATCATAGGCTGTGTTTAGTTCAGCGCAAAGTTTGGATTTTAGTTGAAATTGGAGATGATTAGTTGAAATTGGAGATGATGTGACTGAAAAGTTGTGTGTGTATGACAGGTTGATGTGATAGAAAATGACTGAAGTTTGGATACAAACTTTGGATCTAAACACAGCCATAGTGTCAAAGATATTTCAAATATTGAATGGGCAAATTATGCATTCATCTAGTGGAGTGAAAACAAAAGAAATATGTAACGTTAAGCCAAATAGCCAATTAATTTTATTATGCTGTATTCATTTTCTTCTAAATAAAAGCCCAAACGATCGGTGATGCATGAAAACAAAGCCCTAATCATAAAACACAATTGAACTTTTTTTTGCTTATCTGATGTACTCTACTCTCTCTATCCTAAATTTTAAGGCCTATAAGTTTTTACACTTTGACCACTAATTTCTTTCATAATATGTTATAATAACTATAAAATCAGCATCATATGAAAGTATTTTAAAATATAGATCTAACGATATGATATACATGACATTAAGCATATATATTATTAGCATAATTATTTATCAAAAGTACCAAAGGTTGATTTTTACTAACAATAAGGATGCCCTAAATTTTAGAACAGATGGAGTAGTTTTATACCATTGTTCCAAAGAAGGTGGATATGAATGTAGAACCAATAAAACCTACTCATAAACGGAAAATAAATTAAAACCCCCGCTTTAAAAAAATAAGAAAAAAGAAATAGAATAGTGTTGTAGCAAGAATGAGAGAGGAATGGCAGGTGTGGCATATAAATACATACTCTCTCAAATTACCAGATGTGAACAGCTCAGTGACAATGTTAACCGTCCTTCTGTTAGTGTCGACCCAGGATGCGTAGAGCTTGAGGATGTGCTTGTGCTGCAGCGATTTCAGCAGCTGGATCTCCGTGCGAAGCCGCTGCAATTCCTTGGATGAACCCATGATTCTCTCGTTTATCTCCACCTTGCCCCATGCCACCTCGATGCCATCCACCGCATCAAATGCCTTGTAGCTGCATATCACATATAATTACCAACATAGTATATCATGTCAATGAACACTGTTGCAATGTACTTCGGTTTTTTCAGTTTTCGGTTTTTTTCTCCCTTTAGCTCCCCTGGCAATGGCAGTTCGACTGGTTGCGTTGTGTAATTGAAACCTTGCTTTCTTCTAATTATAAAAAACGGTTACAATGCTTTCTTGTTCATATCCCGTGAAAAGGCAATCATCTTATTAGGCCCTATTTGCAATGCAGAAATTTCATGATCCGTTCGTCCCAAACAATCTAAAATCATTTTCTAAGATATTTAGGGTGTGTTTTATTCTACATGTTACCAATGTTTTCCGTACGCATGGTTCTGAAATAATTAACCGAGAAGTGTAACAATCGAGGAGAGGGAGAGATTGGAAGCATTACACTGTCTTGGAGGATCCTGATCCGATGATCTCCCTGTACTGTCATTACGCGCGAAATCAATCAGCCAAATCAGAAGAACAAACTAAACTAATCCAGCATAAACCTCGCCAAAAAATAAAAAAAAAATCAAAACATGGAAGAACGCTCGCACGGACCCGAAGGTAGCGGCCGGTGGGGTCGGCCTCGGCGACGTCGGGGTCCTCGTCCGGCGGCTCCGGCTGCTCGTCGGCGACGTCCTCCGCAGCCGGCTTCGGAGGCATCAT
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CDS seq | ATGCCTCCGAAGCCGGCTGCGGAGGACGTCGCCGACGAGCAGCCGGAGCCGCCGGACGAGGACCCCGACGTCGCCGAGGCCGACCCCACCGGCCGCTACCTTCGGTACAGGGAGATCATCGGATCAGGATCCTCCAAGACAGTCTACAAGGCATTTGATGCGGTGGATGGCATCGAGGTGGCATGGGGCAAGGTGGAGATAAACGAGAGAATCATGGGTTCATCCAAGGAATTGCAGCGGCTTCGCACGGAGATCCAGCTGCTGAAATCGCTGCAGCACAAGCACATCCTCAAGCTCTACGCATCCTGGGTCGACACTAACAGAAGGACGGTTAACATTGTCACTGAGCTGTTCACATCTGGTAATTTGAGAGAGTATAAGCCACCAATCATACATAGGGACTTGAAGTGTGACAACATTTTCATTAACGGGAACCATGGGAAAGTGAAGATTGGAGACTTTGGTTTAGCAATGGTGATGCAGCAAAGGAAAACACGGAGTATACAAGGCACCATAGAATTCATGGCACCAGAGCTTTTTGGTGAAAATTACAATGAGCTGGTCGATATATATTCTTTTGGAATGTGCATGCTGGAGATGGTGACTTGTGAATGCCCATACAGTGAATGCAAGGGCTTTATTCAGATATACAAGAAGATTACTGAAGGTGTAAAGCCAGCTGCTCTCTCCAAAGTCAAAGACGCAGAAGTGAGAGGCTTCATTGAGAGCTGTCTAGCTTCAGTATCTGACAGGTTGCCTGCAAGTGAGCTCTTGAAGAGCCCTTTTCTTCAGAGTGATGATGCCAATCACAGAAGCTCCAATTCAGTTCAAGAACCAGTAAAATTCCCTGAAAACAATTTTACTAAAGATGAACCAATTTTTGTCTCTCTGGCGCCGAATAATGGGACAGTCAATGGGAAGGAGCAATCTTTCATCTTGGTGCTTCAGAAGAGTGATTTTTTGTTGGAAGGGAACATGAGCACCACCAACCCTGTCATGCTGTTTCTGCGATTCCCTGGTCCTGATGGTAAGTTCAAGAATGTTCAGTTCCCCTTTGACATGGAGAAAGATACCAGCCTGTCGGTGTCCACTGAAATGGTTGAGCAGCTTGAGCTGCCTGAATGGAACAACCCTGTCTTGGCCGAGTTGATAGACGCCTTCTTACTACACATTTTGCCCAGTTGGAAACCCTGTGTTAAAGTTGGAAAGATGTTGCCAAGTTCTTCCTAG
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Protein seq | MPPKPAAEDVADEQPEPPDEDPDVAEADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQKSDFLLEGNMSTTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEWNNPVLAELIDAFLLHILPSWKPCVKVGKMLPSSS |
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Function | Probable serine/threonine-protein kinase WNK6 [UniProtKB/Swiss-Prot:Q2RA93] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsARC_11g0004100 | OsARC_11g0004100.01 | Chr11 | 2983092 | 2986458 | - | NAM | ||
CDS seq | ATGCCTCCGAAGCCGGCTGCGGAGGACGTCGCCGACGAGCAGCCGGAGCCGCCGGACGAGGACCCCGACGTCGCCGAGGCCGACCCCACCGGCCGCTACCTTCGGTACAGGGAGATCATCGGATCAGGATCCTCCAAGACAGTCTACAAGGCATTTGATGCGGTGGATGGCATCGAGGTGGCATGGGGCAAGGTGGAGATAAACGAGAGAATCATGGGTTCATCCAAGGAATTGCAGCGGCTTCGCACGGAGATCCAGCTGCTGAAATCGCTGCAGCACAAGCACATCCTCAAGCTCTACGCATCCTGGGTCGACACTAACAGAAGGACGGTTAACATTGTCACTGAGCTGTTCACATCTGGTAATTTGAGAGAGTATAAGCCACCAATCATACATAGGGACTTGAAGTGTGACAACATTTTCATTAACGGGAACCATGGGAAAGTGAAGATTGGAGACTTTGGTTTAGCAATGGTGATGCAGCAAAGGAAAACACGGAGTATACAAGGCACCATAGAATTCATGGCACCAGAGCTTTTTGGTGAAAATTACAATGAGCTGGTCGATATATATTCTTTTGGAATGTGCATGCTGGAGATGGTGACTTGTGAATGCCCATACAGTGAATGCAAGGGCTTTATTCAGATATACAAGAAGATTACTGAAGGTGTAAAGCCAGCTGCTCTCTCCAAAGTCAAAGACGCAGAAGTGAGAGGCTTCATTGAGAGCTGTCTAGCTTCAGTATCTGACAGGTTGCCTGCAAGTGAGCTCTTGAAGAGCCCTTTTCTTCAGAGTGATGATGCCAATCACAGAAGCTCCAATTCAGTTCAAGAACCAGTAAAATTCCCTGAAAACAATTTTACTAAAGATGAACCAATTTTTGTCTCTCTGGCGCCGAATAATGGGACAGTCAATGGGAAGGAGCAATCTTTCATCTTGGTGCTTCAGAAGAGTGATTTTTTGTTGGAAGGGAACATGAGCACCACCAACCCTGTCATGCTGTTTCTGCGATTCCCTGGTCCTGATGGTAAGTTCAAGAATGTTCAGTTCCCCTTTGACATGGAGAAAGATACCAGCCTGTCGGTGTCCACTGAAATGGTTGAGCAGCTTGAGCTGCCTGAATGGAACAACCCTGTCTTGGCCGAGTTGATAGACGCCTTCTTACTACACATTTTGCCCAGTTGGAAACCCTGTGTTAAAGTTGGAAAGATGTTGCCAAGTTCTTCCTAG
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Protein seq | MPPKPAAEDVADEQPEPPDEDPDVAEADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQKSDFLLEGNMSTTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEWNNPVLAELIDAFLLHILPSWKPCVKVGKMLPSSS
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.037186 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0160300 | RBH | 0.0 | 0.000000 | 0.000000 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g06140 | RBH | 0.0 | 0.000000 | 0.000000 |
Nipponbare | IRGSP 1.0 | RAP-db | Os11g0160300 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004180 | RBH | 0.0 | 0.0 | 0.266077 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004250 | RBH | 0.0 | 0.0 | 1.008895 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004170 | RBH | 0.0 | 0.0 | 1.904511 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0004210 | RBH | 0.422634 | 0.874404 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0004080 | RBH | 0.0 | 0.0 | 2.212832 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0051300 | RBH | 0.014362 | 1.03863 | 0.0587225 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004170 | RBH | 0.0 | 0.083802 | 0.193174 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0051600 | RBH | 0.0146305 | 0.683278 | 0.403519 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0004090 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004170 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004170 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0004070 | RBH | 0.0 | 0.0 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004190 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G004150 | RBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004150 | RBH | 0.0 | 0.0 | 3.050363 |