Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_11g0004100 OGI:11008990 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr11:2983092-2986458
Gene Symbol WNK6, OsWNK6
DNA seq

TGTAGCAAATTTTGCCTTTTATTTATAGATGTGCACAAGATCTCGAAGCAGTTCTAGCCATCCAAAAGTGATGGATAGATAAGAAAAGGAAAAGAACAAGTGATGGAACATCATATCTGGATACAGCATTGGCAGCACCGTTATCCTATGCAGGAATTCACATACAGGCTACAACAGCTAAAATCAAGAATTCATCGACTCTATTAAGAACTCTTCCCTAGCAGTAATTCTGTACAAATTTTCTCAATCGTCAGTGAAAACCACGGCGCTGAGATTTGAGCATGCACCAAGGAGAATGAACCATATTCTGCATGCCACCGAAATGGGGAAAACTGGACAACTCACTCCCTAGGAAGAACTTGGCAACATCTTTCCAACTTTAACACAGGGTTTCCAACTGGGCAAAATGTGTAGTAAGAAGGCGTCTATCAACTCGGCCAAGACAGGGTTGTTCCATTCAGGCAGCTCAAGCTGCTCAACCATTTCAGTGGACACCGACAGGCTGGTATCTTTCTCCATGTCAAAGGGGAACTGAACATTCTTGAACTTACCTGCAAAAAGAAATTATAAATTTAAGTCAGTTTTGTTGTTCGAAAAGACAGAAACTAAGTTGCATTCAAATCCTAAGAGGCTAAGATGTCATTTTGATGCTTATTATTTTACCATCAGGACCAGGGAATCGCAGAAACAGCATGACAGGGTTGGTGGTGCTCATGTTCCCTTCCAACAAAAAATCACTCTTCTGAAGCACCAAGATGAAAGATTGCTCCTTCCCATTGACTGTCCCATTATTCGGCGCCAGAGAGACAAAAATTGGTTCATCTTTAGTAAAATTGTTTTCAGGGAATTTTACTGGTTCTTGAACTGAATTGGAGCTTCTGTGATTGGCATCATCACTCTGAAGAAAAGGGCTCTTCAAGAGCTCACTTGCAGGCAACCTGTCAGATACTGAAGCTAGACAGCTCTCAATGAAGCCTCTCACTTCTGCGTCTTTGACTTTGGAGAGAGCAGCTGGCTTTACACCCTGAAGAGTTACAGCGCCATGAATATTGATGTAGAAGAGTTATATGTTTAGCTACCAGAATCGTAGAAGTAGGTATATGTATGAATGCTGTATATAGAAGGCCACTTACTTCAGTAATCTTCTTGTATATCTGAATAAAGCCCTTGCATTCACTGTATGGGCATTCACAAGTCACCATCTCCAGCATGCACATTCCAAAAGAATATATATCGACCAGCTCATTGTAATTTTCACCAAAAAGCTCTGGTGCCATGAATTCTATGGTGCCTGTATTTAACAAGAGTAATTGTCGATTCATGTTTTACTTGAAGATAAAGAAGAAAATTCAAGAAAGCATAGAAGACAGCCGTCTCCAGTCCTTGTAATTAATTTACTTGTAATTATTGTGGCCTTTGTGGAGCAGTTCACCGACCTTGTATACTCCGTGTTTTCCTTTGCTGCATCACCATTGCTAAACCAAAGTCTCCAATCTTCACTTTCCCATGGTTCCCGTTAATGAAAATGTTGTCACACTTCAAGTCCCTATGTATGATTGGTGGCTTCTGACTGTGTAGATATTCCAACCCTGTCAGTATTTGCTTTGCCCATCGTCTCATTGCTTTCATGTCAACCTTTTTGTGCTTTGTACGGTACCTAGTCATATCATAGGCTGTGTTTAGTTCAGCGCAAAGTTTGGATTTTAGTTGAAATTGGAGATGATTAGTTGAAATTGGAGATGATGTGACTGAAAAGTTGTGTGTGTATGACAGGTTGATGTGATAGAAAATGACTGAAGTTTGGATACAAACTTTGGATCTAAACACAGCCATAGTGTCAAAGATATTTCAAATATTGAATGGGCAAATTATGCATTCATCTAGTGGAGTGAAAACAAAAGAAATATGTAACGTTAAGCCAAATAGCCAATTAATTTTATTATGCTGTATTCATTTTCTTCTAAATAAAAGCCCAAACGATCGGTGATGCATGAAAACAAAGCCCTAATCATAAAACACAATTGAACTTTTTTTTGCTTATCTGATGTACTCTACTCTCTCTATCCTAAATTTTAAGGCCTATAAGTTTTTACACTTTGACCACTAATTTCTTTCATAATATGTTATAATAACTATAAAATCAGCATCATATGAAAGTATTTTAAAATATAGATCTAACGATATGATATACATGACATTAAGCATATATATTATTAGCATAATTATTTATCAAAAGTACCAAAGGTTGATTTTTACTAACAATAAGGATGCCCTAAATTTTAGAACAGATGGAGTAGTTTTATACCATTGTTCCAAAGAAGGTGGATATGAATGTAGAACCAATAAAACCTACTCATAAACGGAAAATAAATTAAAACCCCCGCTTTAAAAAAATAAGAAAAAAGAAATAGAATAGTGTTGTAGCAAGAATGAGAGAGGAATGGCAGGTGTGGCATATAAATACATACTCTCTCAAATTACCAGATGTGAACAGCTCAGTGACAATGTTAACCGTCCTTCTGTTAGTGTCGACCCAGGATGCGTAGAGCTTGAGGATGTGCTTGTGCTGCAGCGATTTCAGCAGCTGGATCTCCGTGCGAAGCCGCTGCAATTCCTTGGATGAACCCATGATTCTCTCGTTTATCTCCACCTTGCCCCATGCCACCTCGATGCCATCCACCGCATCAAATGCCTTGTAGCTGCATATCACATATAATTACCAACATAGTATATCATGTCAATGAACACTGTTGCAATGTACTTCGGTTTTTTCAGTTTTCGGTTTTTTTCTCCCTTTAGCTCCCCTGGCAATGGCAGTTCGACTGGTTGCGTTGTGTAATTGAAACCTTGCTTTCTTCTAATTATAAAAAACGGTTACAATGCTTTCTTGTTCATATCCCGTGAAAAGGCAATCATCTTATTAGGCCCTATTTGCAATGCAGAAATTTCATGATCCGTTCGTCCCAAACAATCTAAAATCATTTTCTAAGATATTTAGGGTGTGTTTTATTCTACATGTTACCAATGTTTTCCGTACGCATGGTTCTGAAATAATTAACCGAGAAGTGTAACAATCGAGGAGAGGGAGAGATTGGAAGCATTACACTGTCTTGGAGGATCCTGATCCGATGATCTCCCTGTACTGTCATTACGCGCGAAATCAATCAGCCAAATCAGAAGAACAAACTAAACTAATCCAGCATAAACCTCGCCAAAAAATAAAAAAAAAATCAAAACATGGAAGAACGCTCGCACGGACCCGAAGGTAGCGGCCGGTGGGGTCGGCCTCGGCGACGTCGGGGTCCTCGTCCGGCGGCTCCGGCTGCTCGTCGGCGACGTCCTCCGCAGCCGGCTTCGGAGGCATCAT

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CDS seq

ATGCCTCCGAAGCCGGCTGCGGAGGACGTCGCCGACGAGCAGCCGGAGCCGCCGGACGAGGACCCCGACGTCGCCGAGGCCGACCCCACCGGCCGCTACCTTCGGTACAGGGAGATCATCGGATCAGGATCCTCCAAGACAGTCTACAAGGCATTTGATGCGGTGGATGGCATCGAGGTGGCATGGGGCAAGGTGGAGATAAACGAGAGAATCATGGGTTCATCCAAGGAATTGCAGCGGCTTCGCACGGAGATCCAGCTGCTGAAATCGCTGCAGCACAAGCACATCCTCAAGCTCTACGCATCCTGGGTCGACACTAACAGAAGGACGGTTAACATTGTCACTGAGCTGTTCACATCTGGTAATTTGAGAGAGTATAAGCCACCAATCATACATAGGGACTTGAAGTGTGACAACATTTTCATTAACGGGAACCATGGGAAAGTGAAGATTGGAGACTTTGGTTTAGCAATGGTGATGCAGCAAAGGAAAACACGGAGTATACAAGGCACCATAGAATTCATGGCACCAGAGCTTTTTGGTGAAAATTACAATGAGCTGGTCGATATATATTCTTTTGGAATGTGCATGCTGGAGATGGTGACTTGTGAATGCCCATACAGTGAATGCAAGGGCTTTATTCAGATATACAAGAAGATTACTGAAGGTGTAAAGCCAGCTGCTCTCTCCAAAGTCAAAGACGCAGAAGTGAGAGGCTTCATTGAGAGCTGTCTAGCTTCAGTATCTGACAGGTTGCCTGCAAGTGAGCTCTTGAAGAGCCCTTTTCTTCAGAGTGATGATGCCAATCACAGAAGCTCCAATTCAGTTCAAGAACCAGTAAAATTCCCTGAAAACAATTTTACTAAAGATGAACCAATTTTTGTCTCTCTGGCGCCGAATAATGGGACAGTCAATGGGAAGGAGCAATCTTTCATCTTGGTGCTTCAGAAGAGTGATTTTTTGTTGGAAGGGAACATGAGCACCACCAACCCTGTCATGCTGTTTCTGCGATTCCCTGGTCCTGATGGTAAGTTCAAGAATGTTCAGTTCCCCTTTGACATGGAGAAAGATACCAGCCTGTCGGTGTCCACTGAAATGGTTGAGCAGCTTGAGCTGCCTGAATGGAACAACCCTGTCTTGGCCGAGTTGATAGACGCCTTCTTACTACACATTTTGCCCAGTTGGAAACCCTGTGTTAAAGTTGGAAAGATGTTGCCAAGTTCTTCCTAG

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Protein seq

MPPKPAAEDVADEQPEPPDEDPDVAEADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQKSDFLLEGNMSTTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEWNNPVLAELIDAFLLHILPSWKPCVKVGKMLPSSS

Function Probable serine/threonine-protein kinase WNK6 [UniProtKB/Swiss-Prot:Q2RA93]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_11g0004100 OsARC_11g0004100.01 Chr11 2983092 2986458 - NAM
CDS seq

ATGCCTCCGAAGCCGGCTGCGGAGGACGTCGCCGACGAGCAGCCGGAGCCGCCGGACGAGGACCCCGACGTCGCCGAGGCCGACCCCACCGGCCGCTACCTTCGGTACAGGGAGATCATCGGATCAGGATCCTCCAAGACAGTCTACAAGGCATTTGATGCGGTGGATGGCATCGAGGTGGCATGGGGCAAGGTGGAGATAAACGAGAGAATCATGGGTTCATCCAAGGAATTGCAGCGGCTTCGCACGGAGATCCAGCTGCTGAAATCGCTGCAGCACAAGCACATCCTCAAGCTCTACGCATCCTGGGTCGACACTAACAGAAGGACGGTTAACATTGTCACTGAGCTGTTCACATCTGGTAATTTGAGAGAGTATAAGCCACCAATCATACATAGGGACTTGAAGTGTGACAACATTTTCATTAACGGGAACCATGGGAAAGTGAAGATTGGAGACTTTGGTTTAGCAATGGTGATGCAGCAAAGGAAAACACGGAGTATACAAGGCACCATAGAATTCATGGCACCAGAGCTTTTTGGTGAAAATTACAATGAGCTGGTCGATATATATTCTTTTGGAATGTGCATGCTGGAGATGGTGACTTGTGAATGCCCATACAGTGAATGCAAGGGCTTTATTCAGATATACAAGAAGATTACTGAAGGTGTAAAGCCAGCTGCTCTCTCCAAAGTCAAAGACGCAGAAGTGAGAGGCTTCATTGAGAGCTGTCTAGCTTCAGTATCTGACAGGTTGCCTGCAAGTGAGCTCTTGAAGAGCCCTTTTCTTCAGAGTGATGATGCCAATCACAGAAGCTCCAATTCAGTTCAAGAACCAGTAAAATTCCCTGAAAACAATTTTACTAAAGATGAACCAATTTTTGTCTCTCTGGCGCCGAATAATGGGACAGTCAATGGGAAGGAGCAATCTTTCATCTTGGTGCTTCAGAAGAGTGATTTTTTGTTGGAAGGGAACATGAGCACCACCAACCCTGTCATGCTGTTTCTGCGATTCCCTGGTCCTGATGGTAAGTTCAAGAATGTTCAGTTCCCCTTTGACATGGAGAAAGATACCAGCCTGTCGGTGTCCACTGAAATGGTTGAGCAGCTTGAGCTGCCTGAATGGAACAACCCTGTCTTGGCCGAGTTGATAGACGCCTTCTTACTACACATTTTGCCCAGTTGGAAACCCTGTGTTAAAGTTGGAAAGATGTTGCCAAGTTCTTCCTAG

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Protein seq

MPPKPAAEDVADEQPEPPDEDPDVAEADPTGRYLRYREIIGSGSSKTVYKAFDAVDGIEVAWGKVEINERIMGSSKELQRLRTEIQLLKSLQHKHILKLYASWVDTNRRTVNIVTELFTSGNLREYKPPIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMVTCECPYSECKGFIQIYKKITEGVKPAALSKVKDAEVRGFIESCLASVSDRLPASELLKSPFLQSDDANHRSSNSVQEPVKFPENNFTKDEPIFVSLAPNNGTVNGKEQSFILVLQKSDFLLEGNMSTTNPVMLFLRFPGPDGKFKNVQFPFDMEKDTSLSVSTEMVEQLELPEWNNPVLAELIDAFLLHILPSWKPCVKVGKMLPSSS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.037186 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0160300 RBH 0.0 0.000000 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g06140 RBH 0.0 0.000000 0.000000
Nipponbare | IRGSP 1.0 | RAP-db Os11g0160300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0004180 RBH 0.0 0.0 0.266077
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0004250 RBH 0.0 0.0 1.008895
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0004170 RBH 0.0 0.0 1.904511
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0004210 RBH 0.422634 0.874404 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0004080 RBH 0.0 0.0 2.212832
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0051300 RBH 0.014362 1.03863 0.0587225
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0004170 RBH 0.0 0.083802 0.193174
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0051600 RBH 0.0146305 0.683278 0.403519
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0004090 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0004170 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0004170 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0004070 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0004190 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G004150 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0004150 RBH 0.0 0.0 3.050363
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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