Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0002310 | OGI:10010020 | 6/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:3292560-3293507 | ||||||||
| Gene Symbol | LRR-RLK2, OsLRR-RLK2 | ||||||||||
| DNA seq | tcaggtttgagagtggcctatctcttttggtatttcaccagtaaagctgcagccaacaagaattctgcagagaaatgagaggggacaagtcaaacaagaatccatgaactgactgaaaaatctcaagttagcagactaacgaacttctccaaagttaaactactcacaagttttggagcttgctcaaggttccaatggttgaatgaaggggtccacgcaagttcttgttgtaggataagtccctgcaacaaaaacagaagcgtttcagaagtttgcataaatttccaaatttccaactatgcacatgttacgcctaattcgcaatccaaagtgctcaaactacagagagaagagagatacatacaggtactgcaatttgataaggactgaatgtccccggaaagcgtcccggacaatccaaaacttgacagtcttctgtaaaaacaccatgaaacaagaagacacatgagtgatcttgttactcatattactgcataattgcaagaaaaaaaaatcactccatggacatatacaaatctctgatgctgatatactaacatggacgtgacccggttcccggtgcaaattatcccgatccatttgtctccacatggatcgttgccattcccccagttcgatggtttggtgtccgtgcccagctacctgcaatcccattgaggccagcagctgcagagatagacaagaagaacatcaaaattagcactgcagcaacaaatactgaagaggaactgaacttactactgtcttgcgttcgtgtcgccgaagcgacaaaaaccagcacaataacactcaacaagaagatgataatccatggagaaaccccatgtttggacacactctcgagctgtcactgaaatgcttttagcagctcattcttgcaaggtcggaagctctgattgcaatgcaacaggccagattagttgttat
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| CDS seq | atgggattgcaggtagctgggcacggacaccaaaccatcgaactgggggaatggcaacgatccatgtggagacaaatggatcgggataatttgcaccgggaaccgggtcacgtccataagactgtcaagttttggattgtccgggacgctttccggggacattcagtccttatcaaattgcagtacctggacttatcctacaacaagaacttgcgtggaccccttcattcaaccattggaaccttgagcaagctccaaaacttaattcttgttggctgcagctttactggtgaaataccaaaagagataggccactctcaaacctga |
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| Protein seq | MGLQVAGHGHQTIELGEWQRSMWRQMDRDNLHREPGHVHKTVKFWIVRDAFRGHSVLIKLQYLDLSYNKNLRGPLHSTIGTLSKLQNLILVGCSFTGEIPKEIGHSQT |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0002310 | OsLiXu_10g0002310.02 | Chr10 | 3292560 | 3293334 | - | NAM | ||
| CDS seq | atgttcttcttgtctatctctgcagctgctggcctcaatgggattgcagaagactgtcaagttttggattgtccgggacgctttccggggacattcagtccttatcaaattgcagtacctggacttatcctacaacaagaacttgcgtggaccccttcattcaaccattggaaccttgagcaagctccaaaacttaattcttgttggctgcagctttactggtga
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| Protein seq | MFFLSISAAAGLNGIAEDCQVLDCPGRFPGTFSPYQIAVPGLILQQELAWTPSFNHWNLEQAPKLNSCWLQLYW |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0002310 | OsLiXu_10g0002310.01 | Chr10 | 3292560 | 3293507 | - | NAM | ||
| CDS seq | atgggattgcaggtagctgggcacggacaccaaaccatcgaactgggggaatggcaacgatccatgtggagacaaatggatcgggataatttgcaccgggaaccgggtcacgtccataagactgtcaagttttggattgtccgggacgctttccggggacattcagtccttatcaaattgcagtacctggacttatcctacaacaagaacttgcgtggaccccttcattcaaccattggaaccttgagcaagctccaaaacttaattcttgttggctgcagctttactggtgaaataccaaaagagataggccactctcaaacctga
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| Protein seq | MGLQVAGHGHQTIELGEWQRSMWRQMDRDNLHREPGHVHKTVKFWIVRDAFRGHSVLIKLQYLDLSYNKNLRGPLHSTIGTLSKLQNLILVGCSFTGEIPKEIGHSQT |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr10 | 3292994 | 3293223 | - | OsLiXu_10g0002310.01 | OsLiXu_10g0002310.02,OsLiXu_10g0002310.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g05570 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002490 | SBH | 0.0 | 9.865128 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0002450 | SBH | 0.0 | 3.349189 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0002390 | RBH | 0.0 | 7.055257 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0002310 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0046800 | RBH | 0.0327145 | 20.7975265 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0002580 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0052700 | RBH | 0 | 17.255827 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0002400 | SBH | 0.000000 | 0.111227 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0002420 | SBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0002500 | SBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0056440 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G002480 | SBH | 0.190698 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
