Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_10g0002390 | OGI:10010020 | 6/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr10:2669027-2670086 | ||||||||
| Gene Symbol | LRR-RLK2, OsLRR-RLK2 | ||||||||||
| DNA seq | CTACAGAAATATCAGGTTTGAGAGCTGGCCTATCTCTTTTGGTATTTCACCAGTAAAGCTGCAGCCAACAAGAATTCTGCAGAGAAATGAGAGGGGACAAGTCAAACAAGAATCCATGAACTGACTGAAAAATCTCAAGTTAGCAGACTAACTGAACTTCTCCAAAGTTAAACTACTCACAAGTTTTGGAGCTTGCTCAAGGTTCCAATGGTTGAAGGAAGGGGTCCACGCAAGTTCTTGTTGTAGGATAAGTCCCTGCAACAAAAACAGAAGCGTTTCAGAAGTTTGCATAAATTTCCAAATTTCCAACTATGCACATGTTTACGCCTAATTCGCAATCCAAAGTGCTCAAACTACAGAGAGAAGAGAATACATACAGGTACTGCAATTCTGATAAGGACTGAATGTCCCCGGAAAGCGTCCCGGACAATCCAAAACTTGACAGTCTTCTGTAAAAACACCATGAAACAAGAAGACAACATGAGTGATCTTTGTTACTCATATTACTGCATAATTGCAAGAAAAAAAAATCACTCCATGGACATATACAAATCTCTGATGCTGATATACTAACATGGACGTGACCCGGTTCCCGGTGCAAATTATCCCGATCCATTTGTCTCCACATGGATCGTTGCCATTCCCCCAGTTCGATGGTTTGGTGTCCGTGTCCCAGCTACCTGCAATCCCATTGAGGCCAGCAGCTGCAGAGATAGACAAGAAGAACATCAAAATTAGCACTGCAGCAACAAATACTGAAGAGGAACTGAACTATACTTACTGTCTTGCGTTCGTGTCGGCCGAAGCGACAAAAACCAGCACAATAACACTCAACAAGAAGATGATAATCCATGGAGAAACCCCCATGTTTGGACACACTCTCGAGCTGTCACTGAAATGCTTTTAGCAGCTCATTCTTTGCAAGGTCGGAAGCTCTGATTGCAATGCAACAGGCCAGATTAGTTGTTATTGTAAGGTAGGAGATGACACACAATTGTATATGCATCAAGAACTGGTCAACACATTGATATGCATGATCGATCCAATAAGTAACCTGCGT
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| CDS seq | ATGGGGGTTTCTCCATGGATTATCATCTTCTTGTTGAGTGTTATTGTGCTGGTTTTTGTCGCTTCGGCCGACACGAACGCAAGACACTGCTGGCCTCAATGGGATTGCAGAAGACTGTCAAGTTTTGGATTGTCCGGGACGCTTTCCGGGGACATTCAGTCCTTATCAGAATTGCAGTACCTGGACTTATCCTACAACAAGAACTTGCGTGGACCCCTTCCTTCAACCATTGGAACCTTGAGCAAGCTCCAAAACTTAATTCTTGTTGGCTGCAGCTTTACTGGTGAAATACCAAAAGAGATAGGCCAGCTCTCAAACCTGATATTTCTGTAG |
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| Protein seq | MGVSPWIIIFLLSVIVLVFVASADTNARHCWPQWDCRRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNLRGPLPSTIGTLSKLQNLILVGCSFTGEIPKEIGQLSNLIFL |
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| Function | Probable leucine-rich repeat receptor-like protein kinase At5g49770 [UniProtKB/Swiss-Prot:Q9LT96] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0002390 | OsCMeo_10g0002390.02 | Chr10 | 2669027 | 2670086 | - | NAM | ||
| CDS seq | ATGTGGAGACAAATGGATCGGGATAATTTGCACCGGGAACCGGGTCACGTCCATAAGACTGTCAAGTTTTGGATTGTCCGGGACGCTTTCCGGGGACATTCAGTCCTTATCAGAATTGCAGTACCTGGACTTATCCTACAACAAGAACTTGCGTGGACCCCTTCCTTCAACCATTGGAACCTTGAGCAAGCTCCAAAACTTAATTCTTGTTGGCTGCAGCTTTACTGGTGA
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| Protein seq | MWRQMDRDNLHREPGHVHKTVKFWIVRDAFRGHSVLIRIAVPGLILQQELAWTPSFNHWNLEQAPKLNSCWLQLYW |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_10g0002390 | OsCMeo_10g0002390.01 | Chr10 | 2669027 | 2670086 | - | NAM | ||
| CDS seq | ATGGGGGTTTCTCCATGGATTATCATCTTCTTGTTGAGTGTTATTGTGCTGGTTTTTGTCGCTTCGGCCGACACGAACGCAAGACACTGCTGGCCTCAATGGGATTGCAGAAGACTGTCAAGTTTTGGATTGTCCGGGACGCTTTCCGGGGACATTCAGTCCTTATCAGAATTGCAGTACCTGGACTTATCCTACAACAAGAACTTGCGTGGACCCCTTCCTTCAACCATTGGAACCTTGAGCAAGCTCCAAAACTTAATTCTTGTTGGCTGCAGCTTTACTGGTGAAATACCAAAAGAGATAGGCCAGCTCTCAAACCTGATATTTCTGTAG
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| Protein seq | MGVSPWIIIFLLSVIVLVFVASADTNARHCWPQWDCRRLSSFGLSGTLSGDIQSLSELQYLDLSYNKNLRGPLPSTIGTLSKLQNLILVGCSFTGEIPKEIGQLSNLIFL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr10 | 2669475 | 2669707 | - | OsCMeo_10g0002390.02 | OsCMeo_10g0002390.02,OsCMeo_10g0002390.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 7.055257 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0469600 | SBH | 0.788101 | 0.418598 | 0.071428 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g05570 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0469600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0002990 | SBH | 0.207678 | 0.717761 | 1.894961 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001020 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0007160 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0006690 | SBH | 8.347888 | 17.757616 | 2.572772 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0046800 | RBH | 0.0327145 | 20.7975265 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0006670 | SBH | 0.886827 | 2.617793 | 0.153153 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0052700 | RBH | 0 | 17.255827 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000950 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001020 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0006690 | SBH | 0.902924 | 37.632534 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0002310 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0003080 | SBH | 0.032294 | 1.517144 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000971 | SBH | 1.907058 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0007040 | SBH | 0.0 | 0.0 | 0.0 |
