Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_10g0000350 | OGI:10002990 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr10:839860-848763 | ||||||||
| Gene Symbol | prx125, PRX125, OsPRX125 | ||||||||||
| DNA seq | ttaatagaaagcccaaaagacagacagagtcttatacaaacaaagaaacaacaaagaaaacagaaacataacggtagccaacagcgctggaactcatcaaaagcaccatccatcctagcgaagatatcacaccctagagatagatctcaaaacgcataacaaagaagccaagagcaaattttcacagctaaactactgcagggaggcaacacgacttcaattggttcagtttgcccatcaacagctcacactaccctttcatgattgcttgatcttcttcccttagcagaatacaccaccgctgaataaaagacagacttatatgtgacctgcaaaggggacttgaccaaaatatctgaaaaaacccagtcagtcctatttaaccagagcacccaacacacactagcaaaaagcatcacccaaacccaagataatactctctccgtattttaatgtatgacgccgttgacttttcgaaccacgtttgaccattcgttttattaaaaaattttattaaatataaaaatatttatgtcatgcttaaagaacatttaatgatgaatcaagtcacattaaaataaatgataattacataaattttttgaataagacgaatggttaaacgttggacaaaaagtcaacggcgtcatacattaaaatatatagaggtaatagttttttttcacaaactgatcagctatatataaaacaacactcgcacaaatgaggcgtcataaatactgttaatttttcattgtgtaatttactgaccatgtatgcatggcctcacataacaaactagctgggtggcccgcgcaattccgcggctagcacccaaacaaaatcatatatttttttactatgattttacttgaaatttattaaatagctatcttattgtcttagactttgaaagaccaaatcttatcatcctcgtgtttctaattatatagtttttaaaagtcacaccagttgctaccccttatgccatctccttctttatttgcttgctcgatctaccactattttctatccatttttcttgtaacctttatagtttttagagtttattgtcacgttgggtttcgtttttataatttctagatgtcccgtcaaacgttaccattatattcctttacggcccatccactgtctcttttctttattgtcattgagattttaaaaatcgaacataattattgtttgggtttattttttattttctagaagtcccgccaaaccgtcaacgattttgccattgcactcctctacggctcacccgctgcctcccttctttactgtcattgagattttaaaatcaaacatgattatcattggtttttttttactttttagaagttctgaaccattaaaaattggactagtagtttcattttttataatttttagaagtcccatcaaacgatgccactatgcccctctatagcccgttcgccgcctactctttattgtcattgtgattttaaaaatcgaacataaccatcgttggaatttattttttattttctagaagtccagttaactgtcggcggctctctaactatattcttatacaccccgcccgctgcttctcctttttattgtcattgagattttaaaaatcaaatatgattatcaatgcggtttattttttttactttctagaagtcctggcaaccgccttactcgtttgcttcacggcctgcctgacgtccctccttttaatcatcattaggattctatttggtattttattaacaatttttatatgtcatgtcaaccgctaccactatactcctttatagtccagttacttaatttatctcgtcatgtgttttagatggtcttttatttcaatagtctttatttttatcataaattttagttatttataaattgtattccgaattgaaatcttatttttctttttctaatttcagcattgttttttaaaaaaattagttaatatcgtattgtgttcttattgtttttattttttattttcaattttaattgtttcaaaattgtattcctacttgaactctcttttaatttttctaattgtggatattattttattttttattctaaattttaattaaactcgtattgggttttcatatggattattctttcaatattacttatttttaattccgaatttcagctaattttaaattgtattcctacttaaactctttttttattttcttgtgctaatttcggatttatttctatttttattccgaattttaattaatctcgtattgggttcttacatggactcttcttttaatatttcttattttTagtttcaaatttcagctaattttaaattttatttctacttgaactattcttttattttctttTgttaatttcggatttatttttattcttattccaaattttaattaatttcgtattgggttcttacatggactcttcttttaatatttcatatttttaattccgaatttcagctatttttattccttatttttaattccgaatttcagctatttttaaattgtacctctaattggactctcctttccttttTaattttggattttattttatttttatttcgaattttgattaatcttgtattggattcttatatggaaacttctttctatattgcttattcttaattccaaatttcaactatttttaaattgtacttctatctggtctctcctttttctttttctttcttttcctccgattaatgtgggaatttctagcccccacagtgaatgtggtgtctcctttcaagactgttttaataatataatagatacatagatagatagatagatagatagatactccctccatactcataaatgaagttgtttaggacatcgatacggtctccaaaacacaacttgacttcgtatttctataaaagtattcattgaaaagtgatatatgtatacttttatgaaagtatttttcaagtcaaatctattcatataacttttacattttcaaactcaacaacttgagagttatttataatttatattttcaaggtttgacttaaacattgtcctaaacaacattctttacgagtacaacatgccgtcttccatgtactattaattaatgccaaaaccttaggcaggctgctagacaacgtctacggataagagatctatattattctcaccatgcaaattcacaatgtgcgtataataaaccaattaggaaaagcaatgaagcacgtacggagactatagaaaccaattaggaaaagcaaggaagcattgtgtaaccgtcgaatcagcttactagttgtcacacatgcatgaaggacagagagttgtgtgcactcataagcattagtacaccgaacaagtcatcagcaaataatatcgaatataataatatatggcagcgcatccaaataatcttatcaagtattactccaattaaagatgggagttaatatatatggaatttttttagattggaccatagcaatcttttctgaacagagataattaaatcttgcaaggacacaaccgacacctccccagctgatttccaagatctaaactgttacgccaaccggtcgacgtgatgtgacaattgatgaatggactacgtgtagcgttcgattgaaaaagtggtcgcggagcccctcctgcgtgttagatttcacgttgtcaacaaacgaacataaacacgcacgaacacattacacaagggaacgtgaaagtggaggggctataaaccgtacactgctgccttctctctcttacaagtctttctttttctctcaacccctctactgtgtttatatccataataaaatagtcatataaggatacatacatgcatatttggtataaggttacttcatccttaaaaaaactgaagaatagaaggaggaggcggtaccgtgatcctcacgatcacggcgcctacctcatggttgctacaaatccaactccttcggaagatcggtttcataataaaaaccctttttacttccggttgggaaccccttttagtcccgggtttccaaccgggagtagcaatctgggactaaagatgtgcatctttagtcccggttgaaataaccgggactaaagatggatctttagtcgggtgttaccaaccgggactaaagaggatagccaggtttttttccttttttattttctcccgaatctaggtggtatgcatatccttttttattttctcctgaatatgggtggtatgcatatcccaaatcgaagtaagatcccaagtccacatcacaaattttaaagttctaaaaaattacatcacaaatcctaaaaaaaAttacacacaaatcaaattacatcacaagtttctacaaaattcatcacaaatacatcacaagttcacatcacacacaaatcaaattcatcacatgatcctgccataaatcataaattcttaaaaaaaaggagccagccggccactgccacctaccctccacgccggccggccggccaccactgtgccacccgcccgctgccgcgccgccgcgccgcctcccatccacgccggccggcccccgacgccgcgccgccgccgcggccctccgcgctgctgcccaccatcgcgccggcttcccctccgcgccggccgctggccgccgcactgccacgctggctgccacccggccttctcttgctccgatccaagcggctggcctctctcgctccgatccaagcgggctaaggaagaagaagaactaaggaagaaggaagaagaaaggataaggatagggagttagagaggaaaaaagagagagaaagagttcgttgtgtggacgggaaaagaggataagtaatagggattatatagtatgtgttgatttttattcccggttagtaacaccaaccgggaataaagataccaaccgggactaaagatcctagccacctgacacggtctgacatatagacaacctcaatcagtaataaatatcatctagtcctgttacgcttataaatcgggactattgtggatttgggtcgaccgactaaagatggtttctccaccagtgatactgtgatccggatcgacggtgtttgccccgaagcttcgcattgatgtttagcgagaaatcgcgttctggatgccgatggatcggttcgcatggataacaggaggtctcgcgtacacctgatttcgtgtccggcgtcgggcaagccattaagaccagttccagtgtctggcgtcgggctcgtgttggagttgccccaaccatatgaatgaggcatccacctgtgagcagcttgacagtgtgcattatccttagttggtaggaaaaccggaagtaatactgcatttgttatctcttaccctatctgtctcaaagaaagaccattcctagcaatgaatctgacacactaggattgtgttttctttggGatggagtagtatgcttttaagtaaagctgggcgtgatgccttttctctaaaagaaaaatactgcacttgttattaaaaagagaatgttaaaacacaagtaagagtgcaagcctcctccatgcgtatctcttaacgaatgcttttaatttttaaacataaatacacatcgtaattttgcaaccttggttttgttttatttttcagaaaataataagcttaatattggttttgactgacaatataaagttgttgatgatatagtggaacaataaataaaacgtgaagtgggacatggaatcaaacatgtaaaccgtttattgcgcctttaatttggaacaaacacaatcatggtacgtacaattacattggtcaaccaattggccaattattaagctggatgcgcgtgatcataatagatccttgatcacacatccaaattgaacacatgtacattcttttttccatccttttctccttgattaattaagctggactactaatatatctcacaaatgcaagcgcgcttaattaactatgcacaaataaatctctctcattttgctaataataacaacaataataatcgacacatacgtaattaattatgtttgacatgatgacgttggttacttcaattttaaactaaccaacgtcatacatgaagtgataattaattgacccttctgcagttggtccggacctcacccagggaagggtcagtgacaggggagaggttgcccatgttgatcatggactgcgcgaagctgcggaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgcctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgttggtgtagtagtggttgtcgaaggtgtccggcgtcatcgggtccaggtcgttgagcgccgccggcggcccgttgggcgggcaccgctgcgacaggaagctccggtaggcggcgtccatggtggggtccggcctccccgtgttgctgaagttgtacagcctgtccgtcacgaactggcactgcaccctcccgaacgtgtgcccacctgcatttcgcattattgtcgtcgtcgtcagctccggcgggcatgacggcagaactgaaattgagttcgccggagaagtgatacgagtacctgagagggcgacgaggtcgacgtcgttgaggttgagggcggcgaacttttggcggaggacggtgaggttgtcggtgggggccggcaggttgagggagccattgaagtcggaggtcttgccgtcgagccgccccagcagcactccccacccgggcccacctgactgtgaccgacaaagagagatcgatccatgtagtccaaaaattattacttgtacgctcaattcaattattcatcgatgagttgcacttgtgaaccctatatgctatatatcttagatatgatgttttgtagtgcatgcagcatgcatggtgcacacgacaagattggtttcagtacaacagtgtcgatcgatcgtcgtcttgtgtgtgtcacacacacacacacacacacacatatatatatatatatatatactagaaaaaatacacgtgcgttgcaacgggtgaaggttattttaaatttattatttttatatggtttagttaagatgaaattcaccgtggaaattcatttggatatatatatatatttagaaaatcatgagctgcagttaagagtctgttcgtctcaagttagtatacgagtttttttaagagatttcttataaactcattatgtatcgccaaaagtgaacgagcttaaaaccaactcaaatacaaatatgtatttccacaagcgatccttctgtatttctaatagcgaatggacttaaaaaccgactcaaatatGGGTATATATTTCCACAAGCAAACAAACTTAAAACCGACTCATACACAGATGACGTATCAAAGTAGCGGCAAAAACATCTTCAATTTTTATAATAGTATATATATATATATTtatatatatatatatatatacatttatatatatatatataaatgtatgtatgtatatgttgatgctgatacttactttgtcctgtcgtaatgttgtctatatatattatacacaaactgtacatgtatatagtagctagctgtacatgtcttactttccttggataattaagtgtggctttgttgttagcatgtgtaatagtttacagataaggttggcgtgagccgtaaaatgtaattaagattatccaatgatatgatgaaatatatatacggcggcatagatatgcatgcgtgcaagcaccgacgacgggcctgtcaaatcattgttgaatgaaaaggtggtacgactgctagacagcactccaatttgtttattcattatggttactagacctgtctagagagttactccctccgtctcgaaatataaaggattttgtgtaaatataatatatcctagtactataaatctagatagagaatgtctaaatttatagtattaggatatatcatattcatcgaaaatcctttatattttgagttggagggaggatagatgcatcttgcaagcacttaattaattcgagagacacgtacaaactaccaataatcatcgatcggcccaaccatatcacacactgtattgtgcaaccatgccgcatattatgatgatattcccacgtagctaatatgattggataccatcgaatccatacaattaagcatgcatgttaatcacgtacttctgtctgtaacgagctactaatacgtcctgtgctgtagttagtagtttttattgggctcaagaaatatgtgaagatatctaaattttacgttaaaacttctactacctcaagatgttatctacccgagatactaagtttcatactagaaaattataaggtaactctcaatacttttacaatgatgataaaattaccatggtaataataaatgaagttaatgaaaattaccagctcgacggagatctcggcggcgagggcgaggatgtcggcgcaggagacaacgccggggcaggcgtcctcgagcgcggccttgacgtcgtcgacgacggggaatcccctcgcggagttgttgttgggcggcgacgtcttctccgacggcatcccggggacgctgtccagcagcagcgacgcgtcgcacccctgcacgaagcagtcgtggaaatggagccggatcaggctcgcgaagatccgggcgtcgctccggtgcgcatcgatcagcacccgccgcacgatgtcgtacgcgtcggggcacgtgcagtcgtagtactcctcgcacagctgcgccaccgccgcgccgccgccggcgaccagcgccaccgccgccgccaccaccaccaccgccagagaggaagaagaagaagaagaagccgccattgctagctagctagctgctacacgactactcctatacggtcgtgtcgtgtgtgttc
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| CDS seq | atggcggcttcttcttcttcttcttcctctctggcggtggtggtggtggcggcggcggtggcgctggtcgccggcggcggcgcggcggtggcgcagctgtgcgaggagtactacgactgcacgtgccccgacgcgtacgacatcgtgcggcggtcaggtgggcccgggtggggagtgctgctggggcggctcgacggcaagacctccgacttcaatggctccctcaacctgccggcccccaccgacaacctcaccgtcctccgccaaaagttcgccgccctcaacctcaacgacgtcgacctcgtcgccctctcaggtactcgtatcacttctccggcgaactcaatttcagttctgccgtcatgcccgccggagctgacgacgacgacaataatgcgaaatgcaggtgggcacacgttcgggagggtgcagtgccagttcgtgacggacaggctgtacaacttcagcaacacggggaggccggaccccaccatggacgccgcctaccggagcttcctgtcgcagcggtgcccgcccaacgggccgccggcggcgctcaacgacctggacccgatgacgccggacaccttcgacaaccactactacaccaacatcgaggtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccgggacgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttccgcagcttcgcgcagtccatgatcaacatgggcaacctctcccctactctgtctgtcttttgggctttctattaa
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| Protein seq | MAASSSSSSSLAVVVVAAAVALVAGGGAAVAQLCEEYYDCTCPDAYDIVRRSGGPGWGVLLGRLDGKTSDFNGSLNLPAPTDNLTVLRQKFAALNLNDVDLVALSGTRITSPANSISVLPSCPPELTTTTIMRNAGGHTFGRVQCQFVTDRLYNFSNTGRPDPTMDAAYRSFLSQRCPPNGPPAALNDLDPMTPDTFDNHYYTNIEVNRGFLQSDQELKSAPEATGTTAPIVDRFATSQAAFFRSFAQSMINMGNLSPTLSVFWAFY |
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| Function | Peroxidase 15 [UniProtKB/Swiss-Prot:Q9LEH3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0000350 | OsLiXu_10g0000350.01 | Chr10 | 839860 | 848707 | - | NAM | ||
| CDS seq | atggcggcttcttcttcttcttcttcctctctggcggtggtggtggtggcggcggcggtggcgctggtcgccggcggcggcgcggcggtggcgcagctgtgcgaggagtactacgactgcacgtgccccgacgcgtacgacatcgtgcggcggtcaggtgggcccgggtggggagtgctgctggggcggctcgacggcaagacctccgacttcaatggctccctcaacctgccggcccccaccgacaacctcaccgtcctccgccaaaagttcgccgccctcaacctcaacgacgtcgacctcgtcgccctctcaggtactcgtatcacttctccggcgaactcaatttcagttctgccgtcatgcccgccggagctgacgacgacgacaataatgcgaaatgcaggtgggcacacgttcgggagggtgcagtgccagttcgtgacggacaggctgtacaacttcagcaacacggggaggccggaccccaccatggacgccgcctaccggagcttcctgtcgcagcggtgcccgcccaacgggccgccggcggcgctcaacgacctggacccgatgacgccggacaccttcgacaaccactactacaccaacatcgaggtcaaccgcggcttcctccagtcggaccaggagctcaagtcggcgccggaggcgaccgggacgacggcgcccatcgtcgaccgcttcgccaccagccaggccgccttcttccgcagcttcgcgcagtccatgatcaacatgggcaacctctcccctactctgtctgtcttttgggctttctattaa
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| Protein seq | MAASSSSSSSLAVVVVAAAVALVAGGGAAVAQLCEEYYDCTCPDAYDIVRRSGGPGWGVLLGRLDGKTSDFNGSLNLPAPTDNLTVLRQKFAALNLNDVDLVALSGTRITSPANSISVLPSCPPELTTTTIMRNAGGHTFGRVQCQFVTDRLYNFSNTGRPDPTMDAAYRSFLSQRCPPNGPPAALNDLDPMTPDTFDNHYYTNIEVNRGFLQSDQELKSAPEATGTTAPIVDRFATSQAAFFRSFAQSMINMGNLSPTLSVFWAFY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_10g0000350 | OsLiXu_10g0000350.02 | Chr10 | 845613 | 848763 | - | IsoSeq | ||
| CDS seq | atggctccctcaacctgccggcccccaccgacaacctcaccgtcctccgccaaaagttcgccgccctcaacctcaacgacgtcgacctcgtcgccctctcaggtgggcacacgttcgggagggtgcagtgccagt |
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| Protein seq | MAPSTCRPPPTTSPSSAKSSPPSTSTTSTSSPSQVGTRSGGCSAS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr10 | 846625 | 848555 | - | OsLiXu_10g0000350.02 | OsLiXu_10g0000350.01,OsLiXu_10g0000350.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.524770 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0109300 | RBH | 0.168724 | 0.0 | 0.412383 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02040 | RBH | 0.103773 | 0.0 | 0.096547 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0109300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0000450 | RBH | 0.000000 | 92.768425 | 8.409596 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000450 | RBH | 0.0 | 26.456936 | 0.747481 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000420 | RBH | 0.0 | 160.977249 | 4.992559 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0000420 | RBH | 0.0 | 6.744576 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0000380 | RBH | 0.0 | 18.173952 | 1.509688 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0012600 | RBH | 18.7787525 | 3.6038745 | 7.9411965 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0000420 | RBH | 0.0 | 8.253822 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0011800 | RBH | 24.686021 | 2.201571 | 7.6903185 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0000420 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000440 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0000420 | RBH | 0.0 | 39.061337 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0054170 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0000400 | RBH | 0.072017 | 70.919746 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000410 | RBH | 0.0 | 16.397909 | 4.732575 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000410 | RBH | 0.0 | 357.137909 | 4.418394 |
