Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_08g0024140 | OGI:08077390 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr08:29423530-29430853 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaagacttccttgtccatctcatggttccttggaatatggaacagaaggcaaaacattgcttcatttcggatggtaagtgtctgtagcttaatttaagcatggaaagtatttcatctttgtctctggcactgtctgcgatggctttccattcatggagttgttgctttgagctcatcaggccacccatagcattgagagcaagaggaagccccctgcatttcttgacaataagtcttccaatggtgaccaattctgctgtctctcgtacttcttcactgaatgctttctttgagaacaattcccatgaatcatcatcattcagacatgctagttcatgggatctcatggtgcccatgatagatgctacttgttggctccgagttgtgaccactacaacacttccatgaccaccagcagcagagcacaagagtggccttagttcatcctgccacttgttctcatcctcgttccatacatcgtcaagaactaacagaaaccttctgctaccaatggctccctcaagctgccgtcgcaagagctcgatggtgtccttgtcaggcacttgacatcttcgatttgtagccaattcaacgatggatttcagaaggggaacagcttcaaaattctctgaaacacagtgccacatcttcagctggaaatggtcacgtaccctcgtgtcgttgtacaccatcttggcgagcgtcgtcttgcctgaacccccgatcccgatgacagggagaacctgcaatctctgctcatatcgctgatccagcaacagcttaaccaccacctccttgttgtcgtctctgccaacaatgtcacttgattcatccagtgcagcagaatgcatctggagataaggaggtttcagttcttgtggtgattctgtgcgatccactgacaagccaagctcgttcatcttgtcaaccagcttgttcatcttctcgaggacattgctcagcttcttgctcatggttacgcggaacaggagtgggttgtgcggggtgaagtagccgagtaccttgccggcggtggcgtcgccgtcgcggcgcagcgcctcgtagcggaagtcgtcgaggacgtcgtcggcctcgtaggcggcggcgttgaggtccttcatccagcgcctgacggcgaggttggtctcgctcttcgcctcggcgtcggccagcgcgcgctggacggccagcagctggcgttgcagcttgcggcggtcgtcgtcgacggcgccgcacgcgccggtgactctctgtacgagtgcatcggcggccttcgccgccaccccgcgcaccatggggaggattagcgattccgccatggctctatgctgctcactaattagctgcaacttctctcgctttttctctcaggctctttgattgctcgatgcgcgaaagaaagcaaagaggcaattaagcttatatttttggctgtcacagtcttcaattgttcatttgaattgatcgagcatgttgatagttgactttttttttttttttgcattgtacattcaaatcttagtttctttgtgggttgtcatattagtacttaccaggattttcagctgattgcactagatttttgttccttctgattagtcccgtcacagagataccatgttctatcttgatgtagactacttaaatggggtattgtctactttgttgtaaaagaaaaagaaaaaccatgcactctatgatctcaggctttatgaatagccaataataacaagaatttcaacgccccatttgcagtacaacacgatttgcaaccgtcatcgtaacacgcaacaacccacagaaggagaactcaccaaggaatggctcagaatcaacaaattatgcatgacatgataactgcatattcaatcaccaactgcatatcggcttaattacagcccagcatgcacctggtttcgatgaatgaaatcgacatcgatgagcttgcaatcgggtagatcgccgtggtggttcagaaatcagaagtacactgcgatagcgatgtcgatgacaggagaagactctgaagattatagaaaccagacaccctaaaatcttagaaaaatctgaacttcttaagagtctgaaaccctgaactttttgcaaacttctgaaggataagggccgtccgatctgatccagacggttaagatattcggaaaattcaacacttgtccacgactttttgcgagaaaccccctcctagtatatggtcttctcgttccaagtccccgtctccatccccatccccatccccatccccttgcctgcccggacttctccgccggattggccttgccggccgccggggaaggacggcctagtggcttcaatgttgggttcgtctgccgccgcgctggatccgccgacgccgatggcttccgtacggggcagtggtgctctccggcacccgcggcatgcgagcggaaacctgcggtggtccgagggttcccggggtgaactaggggtcgcggcacgagccctggcggaagctcattgagacgctcggtgaagaggcggagaggatttctcaccgttggtacctcctcctcctccttctcctcccacctctgctcctgctgcttctttgtcgtattacaagttcgcggttcctaaggtttggatgccatttactttcctgcagtggtttctaggatttggtcgcgatttgtagggtttggacgcgactttgttgttgttgtcaaaagattggaagggttgcatccgatggtattaaggagactcgttctgtatttatgtttaaggtttgcatatgacgtgagaatgagaggattaggaggatttctaaaagattttagggcgtctggtttgagcggttttaccatgtttacttgtttgctggtttacgttatagaccctttgctgtttttcaggacgtatgcttgcaaaactatgatggctagttgcaatttgggattgtttttgtgttttacaatctaatgcaaataaattctatgctcagactatgtatctttggggttgtgtacgaaagggcacgtagtctagtggttacagtgacctgagtagtaccccaaggtcctgagttcaaatctccataggagcgaatttcagattgggttgtttgcggggttaagttccctatttcaatggccgtatatatccggttccagttggatgtagaggccggtaaaaatacccttctctaaaaaaaaatctttggggttgtgtatatcatgtggaatgtagaggcagggttttaatccattatctaaaaaaaataaattctatgtctaaattcgaagcaaatgcagtgtttggtaatggtgatgtctagctcaatcttcagatggcatatggattcattgactgcaatctgtgatctttaccatttttattggttgagcaagcaatggttaacatttagcactactgatctaggttcaaaggtgagggactgatagcccttggataaaggtgagggactgatagcccttggataaaggtgagggactgatagcccttggattgcgcatcttgtgtgggttgttcactgctatccacctatcacagattcagattcagaggaacacaaacattacatttacataatgagtaaattcacggtccttgagaggtaccatattttacactagaaaaatatggtatctcctcaatgaccgtaaaAtcactcttacataatccaaggaggagaaggggaaaaaaagagaagaggcagtgcatgtaggcagaccttagttgagagttgagcagcaaggcaggaatttctttgcaaaccccttaacagggtctttcttctatgaagtctctgttcagacatggaatattagagacatactcccagtactcccctcctcttctgcatcgcttatctaacttgtggcttcctagtgtcattagcttcctgaggtttggcagtcgctgaagaagactctgtggcagtgtctctaccccagggcactgccgaacacatagttcctgaagaccagtgaggccatccataacatcaggcaaatttctcagacttgagcaagaaaataatgtgagatctctcaacttggcaagtcttgcaagatttggtggcagagacaccaaagaagtgcattcattaatgcatagtgtctccagtgaagcagggagcttgggaatctctaataagttattgcaaaattctatgtacaacttttccagaccagacgggaataaggattcttctgatgatgaactggtcagattcttgcaataactaaatcttacacagcgaagggaattcaagccacagagctccttcacaggccaatggacaagatcgtcgcataatactatcgacaattcttccacaaatgcaaagcaatcccagaaaccaaagggccagtttgacgaattaggtgagaagaaacaactagaataccaaatgctcagcttctgaattgattccagagggggcatggtcgtctgctgctcatctgggagaagcgagttccctaaagaggctagcgctaatgtcacaagagatggccaggagcgtattggtattacctgcaaatccttagaaacactccagtcaccaacatagttgagttgggaaagtgctgcaagatggctgagtgagttcagtgcaattctgcactggaatatatccagctctcgtaggataggagcttttggaatattcactagctttggacaattgtaaatttttaattctttgagctcagggaacatcaccgatgttacttcattgtccatccatttctccaagttaggtaagtaatgtaaatgcatcttcttcagctttggaaaaatttccagggaaccattgcatcctggaacagccatgtcaatgccactagataatgtggtcaaattatccaaacgggataaagacagggactcaagagagacagactgccataacggtggtagatccttacatctccagcactcagacatgtggagttcttttaggcataggaaaattgcggggtttttcatccatgatgacatttcaatatgaccagagccccatacctgcaatgtttcaagtctgctaggaggtaaagagaactctacgatctcctttttgttgtcaacaacatcgagatcaaagtcatggtcactgtactcgaatatatcatgacaccagtgcaacaacaactcagttacattttcttggatatggagattggcttctcttgcatttgacccactttgtatagctttcagattaaacagttctagtcggccacctagatgatgcaagtctttcagttcttcaagcccacatccatctttggtatccacaacaaatgtggtaagagtccggaggttctttagctgaccaattcttggtggcatgcgtttcaagctatgacaaccaataagataaaggtgcctgagcttgctcataaatctcataccctctggtaaatgctgaagtttcaagcaaccatttaacctcaaagcttgcaagctgtataacatacatattgaatcaggtaaatgttctagcttactagaatgagaaagatcaaggtatcgtaagtgtgttatacttgctaatgcctttggagaaacattcaatttatcattatgcaatgctcgtaaagacgtcaagtttaatctcttgatatttctgggtagtggtgatgattttgaccaatatggtgacaataatgtgtgaagaggtcccacatgtttaaataattcactgttctcttgcaacttggcacttgacatcagatggcggacatctttcatcgaggctttttgctggttcaggtcttgcgcatcaacacattcctctgtgacagattttgctagatcatgcattagatcatgcatgtagcatgtaactgacttgtaagtctgtgcaatcccgacatgaaaactttctacctttacatcttggaagaaggacctccacactagctcattgaaaacaaactgtcctctctcttccaaatccatcatcccctcctcttggatgaaattattcgctatccagagctggaccaacttgtccctctccatctggtagtcctttgggaagattgcgcaaaaggcaaaacattgcttcatttcaagtggtaagtgcctatagctcagttttagtatggataggatctcatttgtagtcccaacatcctcccaactcttgcttcctgcaatagcttcccattcctggattcgcttcttggaactcataaggcctcccattgtcttcagagcaagaggtaaccctttgcacttcttgacaatacgattgccaatctctgcaaactctggctgctgctcctcttctttactgaatgctttcttccggaataattcccatgaatcatcatggtttaggtatgatagcgtgtgagcaggaactgtgcccattatggatgctacccgctggctccgagttgtgacaagtactacacttcctggagcaccagcagaatgcagcaatggcctcagctcctcccatttatgttcctcctcattccaaacatcatcaagaacaagtagataccttttgcggcctaccacctcatgtagacggctgcgcaatagttcgattctgtctggcaaggtgcaatttcccctggtagccaattcaataatggatctgactagagaaacaacattgaaatcatctgagacacagagccacatgggcaactcaaagcgttgttgaacccttgtgtcgttgtacgccatcttcgcaagtgtggtcttgcccaatccccccatccctacgattgatagcacctcaaccatccgcttggatcgctgctcaagtaacaaattcaccaccatctccttgtcgtcgtctctgccaacgatctccatcaagctatcgaggccggagtgcgtctgaggatggatcacatgtactgttgcctgatctgcacgctccactaggccaaacttgttcatctcttcaaccagctcgttgatcttcttgaggacactgttcagcttcttgctcatggcaacacggaacaggagggggctgtgcggcgtgaagtagccgagtaccttgtcggtggtggagtcgccgatctgggcgtcgcggcgcagtgcctcgtagtggaagtcgtcggcctcgtacgcgacggccttgaggtccttcatccacctcttcacggcggggctggtctcgctcttcgcctcggcgtcggacagcttgcactggacggccagaagctggcgctccagcttgtggcgatcgccgtcgacgccgcacatgcgagtgacgctctggacgagcacgccggccgccttgccgaccaccccgcgcaccaccgggaggagcagcgattctgccat
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| CDS seq | atggcagaatcgctgctcctcccggtggtgcgcggggtggtcggcaaggcggccggcgtgctcgtccagagcgtcactcgcatgtgcggcgtcgacggcgatcgccacaagctggagcgccagcttctggccgtccagtgcaagctgtccgacgccgaggcgaagagcgagaccagccccgccgtgaagaggtggatgaaggacctcaaggccgtcgcgtacgaggccgacgacttccactacgaggcactgcgccgcgacgcccagatcggcgactccaccaccgacaaggtactcggctacttcacgccgcacagccccctcctgttccgtgttgccatgagcaagaagctgaacagtgtcctcaagaagatcaacgagctggttgaagagatgaacaagtttggcctagtggagcgtgcagatcaggcaacagtacatgtgatccatcctcagacgcactccggcctcgatagcttgatggagatcgttggcagagacgacgacaaggagatggtggtgaatttgttacttgagcagcgatccaagcggatggttgaggtgctatcaatcgtagggatggggggattgggcaagaccacacttgcgaagatggcgtacaacgacacaagggttcaacaacgctttgagttgcccatgtggctctgtgtctcagatgatttcaatgttgtttctctagtcagatccattattgaattggctaccaggggaaattgcaccttgccagacagaatcgaactattgcgcagccgtctacatgaggtggtaggccgcaaaaggtatctacttgttcttgatgatgtttggaatgaggaggaacataaatgggaggagctgaggccattgctgcattctgctggtgctccaggaagtgtagtacttgtcacaactcggagccagcgggtagcatccataatgggcacagttcctgctcacacgctatcatacctaaaccatgatgattcatgggaattattccggaagaaagcattcagtaaagaagaggagcagcagccagagtttgcagagattggcaatcgtattgtcaagaagtgcaaagggttacctcttgctctgaagacaatgggaggccttatgagttccaagaagcgaatccaggaatgggaagctattgcaggaagcaagagttgggaggatgttgggactacaaatgagatcctatccatactaaaactgagctataggcacttaccacttgaaatgaagcaatgttttgccttttgcgcaatcttcccaaaggactaccagatggagagggacaagttggtccagctctggatagcgaataatttcatccaagaggaggggatgatggatttggaagagagaggacagtttgttttcaatgagctagtgtggaggtccttcttccaagatgtaaaggtagaaagttttcatgtcgggattgcacagacttacaagtcagttacatgctacatgcatgatctaatgcatgatctagcaaaatctgtcacagaggaatgtgttgatgcgcaagacctgaaccagcaaaaagcctcgatgaaagatgtccgccatctgatgtcaagtgccaagttgcaagagaacagtgaattatttaaacatgtgggacctcttcacacattattgtcaccatattggtcaaaatcatcaccactacccagaaatatcaagagattaaacttgacgtctttacgagcattgcataatgataaattgaatgtttctccaaaggcattagcaagtataacacacttacgataccttgatctttctcattctagtaagctagaacatttacctgattcaatatgtatgttatacagcttgcaagctttgaggttaaatggttgcttgaaacttcagcatttaccagagggtatgagatttatgagcaagctcaggcacctttatcttattggttgtcatagcttgaaacgcatgccaccaagaattggtcagctaaagaacctccggactcttaccacatttgttgtggataccaaagatggatgtgggcttgaagaactgaaagacttgcatcatctaggtggccgactagaactgtttaatctgaaagctatacaaagtgggtcaaatgcaagagaagccaatctccatatccaagaaaatgtaactgagttgttgttgcactggtgtcatgatatattcgagtacagtgaccatgactttgatctcgatgttgttgacaacaaaaaggagatcgtagagttctctttacctcctagcagacttgaaacattgcaggtatggggctctggtcatattgaaatgtcatcatggatgaaaaaccccgcaattttcctatgcctaaaagaactccacatgtctgagtgctggagatgtaaggatctaccaccgttatggcagtctgtctctcttgagtccctgtctttatcccgtttggataatttgaccacattatctagtggcattgacatggctgttccaggatgcaatggttccctggaaatttttccaaagctgaagaagatgcatttacattacttacctaacttggagaaatggatggacaatgaagtaacatcggtgatgttccctgagctcaaagaattaaaaatttacaattgtccaaagctagtgaatattccaaaagctcctatcctacgagagctggatatattccagtgcagaattgcactgaactcactcagccatcttgcagcactttcccaactcaactatgttggtgactggagtgtaataccaatacgctcctggccatctcttgtgacattagcgctagcctctttagggaactcgcttctcccagatgagcagcagacgaccatgccccctctggaatcaattcagaagctgagcatttggtattctagttgtttcttctcacctaattcgtcaaactggccctttggtttctgggattgctttgcatttgtggaagaattgtcgatagtattatgcgacgatcttgtccattggcctgtgaaggagctctgtggcttgaattcccttcgctgtgtaagatttagttattgcaagaatctgaccagttcatcatcagaagaatccttattcccgtctggtctggaaaagttgtacatagaattttgcaataacttattagagattcccaagctccctgcttcactggagacactatgcattaatgaatgcacttctttggtgtctctgccaccaaatcttgcaagacttgccaagttgagagatctcacattattttcttgctcaagtctgagaaatttgcctgatgttatggatggcctcactggtcttcaggaactatgtgttcggcagtgccctggggtagagacactgccacagagtcttcttcagcgactgccaaacctcaggaagctaatgacactaggaagccacaagttagataagcgatgcagaagaggaggggagtactgggagtatcatagagccatggcggaatcgctaatcctccccatggtgcgcggggtggcggcgaaggccgccgatgcactcgtacagagagtcaccggcgcgtgcggcgccgtcgacgacgaccgccgcaagctgcaacgccagctgctggccgtccagcgcgcgctggccgacgccgaggcgaagagcgagaccaacctcgccgtcaggcgctggatgaaggacctcaacgccgccgcctacgaggccgacgacgtcctcgacgacttccgctacgaggcgctgcgccgcgacggcgacgccaccgccggcaaggtactcggctacttcaccccgcacaacccactcctgttccgcgtaaccatgagcaagaagctgagcaatgtcctcgagaagatgaacaagctggttgacaagatgaacgagcttggcttgtcagtggatcgcacagaatcaccacaagaactgaaacctccttatctccagatgcattctgctgcactggatgaatcaagtgacattgttggcagagacgacaacaaggaggtggtggttaagctgttgctggatcagcgatatgagcagagattgcaggttctccctgtcatcgggatcgggggttcaggcaagacgacgctcgccaagatggtgtacaacgacacgagggtacgtgaccatttccagctgaagatgtggcactgtgtttcagagaattttgaagctgttccccttctgaaatccatcgttgaattggctacaaatcgaagatgtcaagtgcctgacaaggacaccatcgagctcttgcgacggcagcttgagggagccattggtagcagaaggtttctgttagttcttgacgatgtatggaacgaggatgagaacaagtggcaggatgaactaaggccactcttgtgctctgctgctggtggtcatggaagtgttgtagtggtcacaactcggagccaacaagtagcatctatcatgggcaccatgagatcccatgaactagcatgtctgaatgatgatgattcatgggaattgttctcaaagaaagcattcagtgaagaagtacgagagacagcagaattggtcaccattggaagacttattgtcaagaaatgcagggggcttcctcttgctctcaatgctatgggtggcctgatgagctcaaagcaacaactccatgaatggaaagccatcgcagacagtgccagagacaaagatgaaatactttccatgcttaaattaagctacagacacttaccatccgaaatgaagcaatgttttgccttctgttccatattccaaggaaccatgagatggacaaggaagtcttga
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| Protein seq | MAESLLLPVVRGVVGKAAGVLVQSVTRMCGVDGDRHKLERQLLAVQCKLSDAEAKSETSPAVKRWMKDLKAVAYEADDFHYEALRRDAQIGDSTTDKVLGYFTPHSPLLFRVAMSKKLNSVLKKINELVEEMNKFGLVERADQATVHVIHPQTHSGLDSLMEIVGRDDDKEMVVNLLLEQRSKRMVEVLSIVGMGGLGKTTLAKMAYNDTRVQQRFELPMWLCVSDDFNVVSLVRSIIELATRGNCTLPDRIELLRSRLHEVVGRKRYLLVLDDVWNEEEHKWEELRPLLHSAGAPGSVVLVTTRSQRVASIMGTVPAHTLSYLNHDDSWELFRKKAFSKEEEQQPEFAEIGNRIVKKCKGLPLALKTMGGLMSSKKRIQEWEAIAGSKSWEDVGTTNEILSILKLSYRHLPLEMKQCFAFCAIFPKDYQMERDKLVQLWIANNFIQEEGMMDLEERGQFVFNELVWRSFFQDVKVESFHVGIAQTYKSVTCYMHDLMHDLAKSVTEECVDAQDLNQQKASMKDVRHLMSSAKLQENSELFKHVGPLHTLLSPYWSKSSPLPRNIKRLNLTSLRALHNDKLNVSPKALASITHLRYLDLSHSSKLEHLPDSICMLYSLQALRLNGCLKLQHLPEGMRFMSKLRHLYLIGCHSLKRMPPRIGQLKNLRTLTTFVVDTKDGCGLEELKDLHHLGGRLELFNLKAIQSGSNAREANLHIQENVTELLLHWCHDIFEYSDHDFDLDVVDNKKEIVEFSLPPSRLETLQVWGSGHIEMSSWMKNPAIFLCLKELHMSECWRCKDLPPLWQSVSLESLSLSRLDNLTTLSSGIDMAVPGCNGSLEIFPKLKKMHLHYLPNLEKWMDNEVTSVMFPELKELKIYNCPKLVNIPKAPILRELDIFQCRIALNSLSHLAALSQLNYVGDWSVIPIRSWPSLVTLALASLGNSLLPDEQQTTMPPLESIQKLSIWYSSCFFSPNSSNWPFGFWDCFAFVEELSIVLCDDLVHWPVKELCGLNSLRCVRFSYCKNLTSSSSEESLFPSGLEKLYIEFCNNLLEIPKLPASLETLCINECTSLVSLPPNLARLAKLRDLTLFSCSSLRNLPDVMDGLTGLQELCVRQCPGVETLPQSLLQRLPNLRKLMTLGSHKLDKRCRRGGEYWEYHRAMAESLILPMVRGVAAKAADALVQRVTGACGAVDDDRRKLQRQLLAVQRALADAEAKSETNLAVRRWMKDLNAAAYEADDVLDDFRYEALRRDGDATAGKVLGYFTPHNPLLFRVTMSKKLSNVLEKMNKLVDKMNELGLSVDRTESPQELKPPYLQMHSAALDESSDIVGRDDNKEVVVKLLLDQRYEQRLQVLPVIGIGGSGKTTLAKMVYNDTRVRDHFQLKMWHCVSENFEAVPLLKSIVELATNRRCQVPDKDTIELLRRQLEGAIGSRRFLLVLDDVWNEDENKWQDELRPLLCSAAGGHGSVVVVTTRSQQVASIMGTMRSHELACLNDDDSWELFSKKAFSEEVRETAELVTIGRLIVKKCRGLPLALNAMGGLMSSKQQLHEWKAIADSARDKDEILSMLKLSYRHLPSEMKQCFAFCSIFQGTMRWTRKS |
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| Function | Putative disease resistance protein RGA1 [UniProtKB/Swiss-Prot:Q7XA42] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_08g0024140 | OsLiXu_08g0024140.01 | Chr08 | 29423530 | 29430853 | - | NAM | ||
| CDS seq | atggcagaatcgctgctcctcccggtggtgcgcggggtggtcggcaaggcggccggcgtgctcgtccagagcgtcactcgcatgtgcggcgtcgacggcgatcgccacaagctggagcgccagcttctggccgtccagtgcaagctgtccgacgccgaggcgaagagcgagaccagccccgccgtgaagaggtggatgaaggacctcaaggccgtcgcgtacgaggccgacgacttccactacgaggcactgcgccgcgacgcccagatcggcgactccaccaccgacaaggtactcggctacttcacgccgcacagccccctcctgttccgtgttgccatgagcaagaagctgaacagtgtcctcaagaagatcaacgagctggttgaagagatgaacaagtttggcctagtggagcgtgcagatcaggcaacagtacatgtgatccatcctcagacgcactccggcctcgatagcttgatggagatcgttggcagagacgacgacaaggagatggtggtgaatttgttacttgagcagcgatccaagcggatggttgaggtgctatcaatcgtagggatggggggattgggcaagaccacacttgcgaagatggcgtacaacgacacaagggttcaacaacgctttgagttgcccatgtggctctgtgtctcagatgatttcaatgttgtttctctagtcagatccattattgaattggctaccaggggaaattgcaccttgccagacagaatcgaactattgcgcagccgtctacatgaggtggtaggccgcaaaaggtatctacttgttcttgatgatgtttggaatgaggaggaacataaatgggaggagctgaggccattgctgcattctgctggtgctccaggaagtgtagtacttgtcacaactcggagccagcgggtagcatccataatgggcacagttcctgctcacacgctatcatacctaaaccatgatgattcatgggaattattccggaagaaagcattcagtaaagaagaggagcagcagccagagtttgcagagattggcaatcgtattgtcaagaagtgcaaagggttacctcttgctctgaagacaatgggaggccttatgagttccaagaagcgaatccaggaatgggaagctattgcaggaagcaagagttgggaggatgttgggactacaaatgagatcctatccatactaaaactgagctataggcacttaccacttgaaatgaagcaatgttttgccttttgcgcaatcttcccaaaggactaccagatggagagggacaagttggtccagctctggatagcgaataatttcatccaagaggaggggatgatggatttggaagagagaggacagtttgttttcaatgagctagtgtggaggtccttcttccaagatgtaaaggtagaaagttttcatgtcgggattgcacagacttacaagtcagttacatgctacatgcatgatctaatgcatgatctagcaaaatctgtcacagaggaatgtgttgatgcgcaagacctgaaccagcaaaaagcctcgatgaaagatgtccgccatctgatgtcaagtgccaagttgcaagagaacagtgaattatttaaacatgtgggacctcttcacacattattgtcaccatattggtcaaaatcatcaccactacccagaaatatcaagagattaaacttgacgtctttacgagcattgcataatgataaattgaatgtttctccaaaggcattagcaagtataacacacttacgataccttgatctttctcattctagtaagctagaacatttacctgattcaatatgtatgttatacagcttgcaagctttgaggttaaatggttgcttgaaacttcagcatttaccagagggtatgagatttatgagcaagctcaggcacctttatcttattggttgtcatagcttgaaacgcatgccaccaagaattggtcagctaaagaacctccggactcttaccacatttgttgtggataccaaagatggatgtgggcttgaagaactgaaagacttgcatcatctaggtggccgactagaactgtttaatctgaaagctatacaaagtgggtcaaatgcaagagaagccaatctccatatccaagaaaatgtaactgagttgttgttgcactggtgtcatgatatattcgagtacagtgaccatgactttgatctcgatgttgttgacaacaaaaaggagatcgtagagttctctttacctcctagcagacttgaaacattgcaggtatggggctctggtcatattgaaatgtcatcatggatgaaaaaccccgcaattttcctatgcctaaaagaactccacatgtctgagtgctggagatgtaaggatctaccaccgttatggcagtctgtctctcttgagtccctgtctttatcccgtttggataatttgaccacattatctagtggcattgacatggctgttccaggatgcaatggttccctggaaatttttccaaagctgaagaagatgcatttacattacttacctaacttggagaaatggatggacaatgaagtaacatcggtgatgttccctgagctcaaagaattaaaaatttacaattgtccaaagctagtgaatattccaaaagctcctatcctacgagagctggatatattccagtgcagaattgcactgaactcactcagccatcttgcagcactttcccaactcaactatgttggtgactggagtgtaataccaatacgctcctggccatctcttgtgacattagcgctagcctctttagggaactcgcttctcccagatgagcagcagacgaccatgccccctctggaatcaattcagaagctgagcatttggtattctagttgtttcttctcacctaattcgtcaaactggccctttggtttctgggattgctttgcatttgtggaagaattgtcgatagtattatgcgacgatcttgtccattggcctgtgaaggagctctgtggcttgaattcccttcgctgtgtaagatttagttattgcaagaatctgaccagttcatcatcagaagaatccttattcccgtctggtctggaaaagttgtacatagaattttgcaataacttattagagattcccaagctccctgcttcactggagacactatgcattaatgaatgcacttctttggtgtctctgccaccaaatcttgcaagacttgccaagttgagagatctcacattattttcttgctcaagtctgagaaatttgcctgatgttatggatggcctcactggtcttcaggaactatgtgttcggcagtgccctggggtagagacactgccacagagtcttcttcagcgactgccaaacctcaggaagctaatgacactaggaagccacaagttagataagcgatgcagaagaggaggggagtactgggagtatcatagagccatggcggaatcgctaatcctccccatggtgcgcggggtggcggcgaaggccgccgatgcactcgtacagagagtcaccggcgcgtgcggcgccgtcgacgacgaccgccgcaagctgcaacgccagctgctggccgtccagcgcgcgctggccgacgccgaggcgaagagcgagaccaacctcgccgtcaggcgctggatgaaggacctcaacgccgccgcctacgaggccgacgacgtcctcgacgacttccgctacgaggcgctgcgccgcgacggcgacgccaccgccggcaaggtactcggctacttcaccccgcacaacccactcctgttccgcgtaaccatgagcaagaagctgagcaatgtcctcgagaagatgaacaagctggttgacaagatgaacgagcttggcttgtcagtggatcgcacagaatcaccacaagaactgaaacctccttatctccagatgcattctgctgcactggatgaatcaagtgacattgttggcagagacgacaacaaggaggtggtggttaagctgttgctggatcagcgatatgagcagagattgcaggttctccctgtcatcgggatcgggggttcaggcaagacgacgctcgccaagatggtgtacaacgacacgagggtacgtgaccatttccagctgaagatgtggcactgtgtttcagagaattttgaagctgttccccttctgaaatccatcgttgaattggctacaaatcgaagatgtcaagtgcctgacaaggacaccatcgagctcttgcgacggcagcttgagggagccattggtagcagaaggtttctgttagttcttgacgatgtatggaacgaggatgagaacaagtggcaggatgaactaaggccactcttgtgctctgctgctggtggtcatggaagtgttgtagtggtcacaactcggagccaacaagtagcatctatcatgggcaccatgagatcccatgaactagcatgtctgaatgatgatgattcatgggaattgttctcaaagaaagcattcagtgaagaagtacgagagacagcagaattggtcaccattggaagacttattgtcaagaaatgcagggggcttcctcttgctctcaatgctatgggtggcctgatgagctcaaagcaacaactccatgaatggaaagccatcgcagacagtgccagagacaaagatgaaatactttccatgcttaaattaagctacagacacttaccatccgaaatgaagcaatgttttgccttctgttccatattccaaggaaccatgagatggacaaggaagtcttga
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| Protein seq | MAESLLLPVVRGVVGKAAGVLVQSVTRMCGVDGDRHKLERQLLAVQCKLSDAEAKSETSPAVKRWMKDLKAVAYEADDFHYEALRRDAQIGDSTTDKVLGYFTPHSPLLFRVAMSKKLNSVLKKINELVEEMNKFGLVERADQATVHVIHPQTHSGLDSLMEIVGRDDDKEMVVNLLLEQRSKRMVEVLSIVGMGGLGKTTLAKMAYNDTRVQQRFELPMWLCVSDDFNVVSLVRSIIELATRGNCTLPDRIELLRSRLHEVVGRKRYLLVLDDVWNEEEHKWEELRPLLHSAGAPGSVVLVTTRSQRVASIMGTVPAHTLSYLNHDDSWELFRKKAFSKEEEQQPEFAEIGNRIVKKCKGLPLALKTMGGLMSSKKRIQEWEAIAGSKSWEDVGTTNEILSILKLSYRHLPLEMKQCFAFCAIFPKDYQMERDKLVQLWIANNFIQEEGMMDLEERGQFVFNELVWRSFFQDVKVESFHVGIAQTYKSVTCYMHDLMHDLAKSVTEECVDAQDLNQQKASMKDVRHLMSSAKLQENSELFKHVGPLHTLLSPYWSKSSPLPRNIKRLNLTSLRALHNDKLNVSPKALASITHLRYLDLSHSSKLEHLPDSICMLYSLQALRLNGCLKLQHLPEGMRFMSKLRHLYLIGCHSLKRMPPRIGQLKNLRTLTTFVVDTKDGCGLEELKDLHHLGGRLELFNLKAIQSGSNAREANLHIQENVTELLLHWCHDIFEYSDHDFDLDVVDNKKEIVEFSLPPSRLETLQVWGSGHIEMSSWMKNPAIFLCLKELHMSECWRCKDLPPLWQSVSLESLSLSRLDNLTTLSSGIDMAVPGCNGSLEIFPKLKKMHLHYLPNLEKWMDNEVTSVMFPELKELKIYNCPKLVNIPKAPILRELDIFQCRIALNSLSHLAALSQLNYVGDWSVIPIRSWPSLVTLALASLGNSLLPDEQQTTMPPLESIQKLSIWYSSCFFSPNSSNWPFGFWDCFAFVEELSIVLCDDLVHWPVKELCGLNSLRCVRFSYCKNLTSSSSEESLFPSGLEKLYIEFCNNLLEIPKLPASLETLCINECTSLVSLPPNLARLAKLRDLTLFSCSSLRNLPDVMDGLTGLQELCVRQCPGVETLPQSLLQRLPNLRKLMTLGSHKLDKRCRRGGEYWEYHRAMAESLILPMVRGVAAKAADALVQRVTGACGAVDDDRRKLQRQLLAVQRALADAEAKSETNLAVRRWMKDLNAAAYEADDVLDDFRYEALRRDGDATAGKVLGYFTPHNPLLFRVTMSKKLSNVLEKMNKLVDKMNELGLSVDRTESPQELKPPYLQMHSAALDESSDIVGRDDNKEVVVKLLLDQRYEQRLQVLPVIGIGGSGKTTLAKMVYNDTRVRDHFQLKMWHCVSENFEAVPLLKSIVELATNRRCQVPDKDTIELLRRQLEGAIGSRRFLLVLDDVWNEDENKWQDELRPLLCSAAGGHGSVVVVTTRSQQVASIMGTMRSHELACLNDDDSWELFSKKAFSEEVRETAELVTIGRLIVKKCRGLPLALNAMGGLMSSKQQLHEWKAIADSARDKDEILSMLKLSYRHLPSEMKQCFAFCSIFQGTMRWTRKS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | 0.106322 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0543100 | RBH | 0.750775 | 0.547373 | 0.985731 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g43010 | RBH | 0.455033 | 0.329954 | 0.230095 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0543100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0024090 | RBH | 0.178070 | 0.702764 | 0.339694 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0023890 | RBH | 0.261677 | 0.864010 | 0.680425 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0023890 | RBH | 0.0 | 0.0 | 0.769757 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0024230 | SBH | 0.031484 | 0.016152 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0023870 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0432100 | RBH | 0.0270025 | 0.2315655 | 0.010064 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0023720 | SBH | 0.078031 | 0.019554 | 0.104711 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0451600 | RBH | 0.147098 | 0.4299835 | 0.404201 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0023110 | RBH | 0.182611 | 0.186662 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0023480 | RBH | 0.036678 | 2.196615 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0023290 | RBH | 1.179987 | 2.777411 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0047840 | RBH | 0.0 | 0.0 | 0.088323 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0023370 | RBH | 0.047404 | 1.107783 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G023570 | RBH | 0.0 | 0.000000 | 0.663672 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0023740 | RBH | 0.0 | 6.806577 | 0.831009 |
