Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_08g0017270 | OGI:08061650 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr08:23200659-23202751 | ||||||||
| Gene Symbol | MYB106, OsMYB106 | ||||||||||
| DNA seq | tacagcactggttaatcattctggttccgtttccaaatctagggagacaaggcaacttgggcgttgaactaacaactgtaaagtccctgagggcattaattgtactgtccctgctatggtcctggaaggtggaggctgacatagagtaattttcagttttataccaatagaaaggtactgacaaattacaatctggtttatttactacatccccacaggcccaggtaccctaatatttcacaaatgcgtggaggaaaaatttgcaaactgcggaagcagttgtagactcttgtagcttctattttctttgctctttcagtttcttttgacattggatgatccaatggatttgctcagaaggcctttcttaaaaagtggagaggactctgctctagagcaaaggtggctgcaggggtggctgctctgaattcaccatactgaagatgccattccaatagttcttattctctgcatcttctgacacctggcttctttgctcatcttggccattgctggactcatcccagcattctgatgtatcatgcatattggatccatcaagcagcatgcctgtgaagcctgctccgatattggctgtccctgggaaccatgactcctcacagccaatgaagtgttcttctgtctctttaccatgcattccctgcagttgttgcttactgacaaacttccactcactttcttcaccctccagttcatcgcttctttgctgccacacattggagttgctttcggataattctagggcggttgttgttgagaatggcagcatgctagcattactccctgcgaacgtcagtgtggaggtgggtgactccaggtctatctttgcactctgccatgcattcaacacatcgaagcatggagaaggtgttgaagcaggtgggttggttgactgtgcatggagtttgcttggtgtagaagctgctatgcgcatcttggattctcgagcaagccgtgcctcggcctcgaggcgggcactctcccactgagccatgtggctgagactggctgtgactttggctgatttgtctcccgccgtgttgttcagagtgccgttgatggctttgtgggtgacaggatcaattcccatcttggccaacctctttttcaggtgggtgttccaatagttcttgatctcattgtcagtgcgctttggtagatgtgttgcaatggcagaccacctgaacaggaacaggggaaaaccttgtgagcttaatattcaaggatttttgttgttcttttgtttgcatcaatcttagaggacagccggatgcagagatgaagtgacataacaagagttcaaattcaacatggaggcaatattcatattttctttttgcttgcagatgtgatggaaatggatgcatatgctttgttatgaagtgtcagacaacagtctgaaagggcctgacaatgcactttatcttatccggtaaacaaagaagtcatgatttttcaatgatgttgcagcagaaggatcactactactgtaaaggtaacttgaagagggaaaaatcttgagtgaactgcttcattgttacctgtttccaagaagagcatgaagttggatgatggtctgctcttcttgtaagctgaattttcctctcttgatgtctggtctcaggtagtttgtccatcgcaacctgcaactcttgccgcacctctgcaaacctgcaatatgttgaccaaattctcactaaatttcatagcattttacctacatttctttgcaagagggtgaaattcaggtctgtccaaactcaccggcttttgaaggcaatgctcgccagctgccatgtccatgctcctcaatgtatgcaagcagcttctggtcttcctctggtgtccatggacctttcttcaggccaatcttctcacagcatggtgaacgccccattggagtagtgcaatatgctatctagcagaagcctagagctggcagctgggtgtggagaatgatatatagagctggagaatggaggaagacgagttgaagctataaatcattagcatggtatgaaggtatgagccctaattttccatgccttatcatgacataaatggccttgtga
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| CDS seq | atggggcgttcaccatgctgtgagaagattggcctgaagaaaggtccatggacaccagaggaagaccagaagctgcttgcatacattgaggagcatggacatggcagctggcgagcattgccttcaaaagccggtttgcagaggtgcggcaagagttgcaggttgcgatggacaaactacctgagaccagacatcaagagaggaaaattcagcttacaagaagagcagaccatcatccaacttcatgctcttcttggaaacaggtggtctgccattgcaacacatctaccaaagcgcactgacaatgagatcaagaactattggaacacccacctgaaaaagaggttggccaagatgggaattgatcctgtcacccacaaagccatcaacggcactctgaacaacacggcgggagacaaatcagccaaagtcacagccagtctcagccacatggctcagtgggagagtgcccgcctcgaggccgaggcacggcttgctcgagaatccaagatgcgcatagcagcttctacaccaagcaaactccatgcacagtcaaccaacccacctgcttcaacaccttctccatgcttcgatgtgttgaatgcatggcagagtgcaaagatagacctggagtcacccacctccacactgacgttcgcagggagtaatgctagcatgctgccattctcaacaacaaccgccctagaattatccgaaagcaactccaatgtgtggcagcaaagaagcgatgaactggagggtgaagaaagtgagtggaagtttgtcagtaagcaacaactgcagggaatgcatggtaaagagacagaagaacacttcattggctgtgaggagtcatggttcccagggacagccaatatcggagcaggcttcacaggcatgctgcttgatggatccaatatgcatgatacatcagaatgctgggatgagtccagcaatggccaagatgagcaaagaagccaggtgtcagaagatgcagagaataagaactattggaatggcatcttcagtatggtgaattcagagcagccacccctgcagccacctttgctctag
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| Protein seq | MGRSPCCEKIGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKAINGTLNNTAGDKSAKVTASLSHMAQWESARLEAEARLARESKMRIAASTPSKLHAQSTNPPASTPSPCFDVLNAWQSAKIDLESPTSTLTFAGSNASMLPFSTTTALELSESNSNVWQQRSDELEGEESEWKFVSKQQLQGMHGKETEEHFIGCEESWFPGTANIGAGFTGMLLDGSNMHDTSECWDESSNGQDEQRSQVSEDAENKNYWNGIFSMVNSEQPPLQPPLL |
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| Function | Transcription factor MYB106 [UniProtKB/Swiss-Prot:Q9LE63] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_08g0017270 | OsLiXu_08g0017270.01 | Chr08 | 23200659 | 23202751 | - | NAM | ||
| CDS seq | atggggcgttcaccatgctgtgagaagattggcctgaagaaaggtccatggacaccagaggaagaccagaagctgcttgcatacattgaggagcatggacatggcagctggcgagcattgccttcaaaagccggtttgcagaggtgcggcaagagttgcaggttgcgatggacaaactacctgagaccagacatcaagagaggaaaattcagcttacaagaagagcagaccatcatccaacttcatgctcttcttggaaacaggtggtctgccattgcaacacatctaccaaagcgcactgacaatgagatcaagaactattggaacacccacctgaaaaagaggttggccaagatgggaattgatcctgtcacccacaaagccatcaacggcactctgaacaacacggcgggagacaaatcagccaaagtcacagccagtctcagccacatggctcagtgggagagtgcccgcctcgaggccgaggcacggcttgctcgagaatccaagatgcgcatagcagcttctacaccaagcaaactccatgcacagtcaaccaacccacctgcttcaacaccttctccatgcttcgatgtgttgaatgcatggcagagtgcaaagatagacctggagtcacccacctccacactgacgttcgcagggagtaatgctagcatgctgccattctcaacaacaaccgccctagaattatccgaaagcaactccaatgtgtggcagcaaagaagcgatgaactggagggtgaagaaagtgagtggaagtttgtcagtaagcaacaactgcagggaatgcatggtaaagagacagaagaacacttcattggctgtgaggagtcatggttcccagggacagccaatatcggagcaggcttcacaggcatgctgcttgatggatccaatatgcatgatacatcagaatgctgggatgagtccagcaatggccaagatgagcaaagaagccaggtgtcagaagatgcagagaataagaactattggaatggcatcttcagtatggtgaattcagagcagccacccctgcagccacctttgctctag
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| Protein seq | MGRSPCCEKIGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKAINGTLNNTAGDKSAKVTASLSHMAQWESARLEAEARLARESKMRIAASTPSKLHAQSTNPPASTPSPCFDVLNAWQSAKIDLESPTSTLTFAGSNASMLPFSTTTALELSESNSNVWQQRSDELEGEESEWKFVSKQQLQGMHGKETEEHFIGCEESWFPGTANIGAGFTGMLLDGSNMHDTSECWDESSNGQDEQRSQVSEDAENKNYWNGIFSMVNSEQPPLQPPLL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0102050 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g33660 | RBH | 0.265968 | 0.000000 | 0.344976 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0433400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0017120 | RBH | 0.000000 | 0.0 | 2.455788 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0016990 | RBH | 0.0 | 0.000000 | 1.288438 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0016940 | RBH | 0.0 | 0.0 | 2.384580 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017260 | RBH | 0.043026 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017110 | RBH | 0.404363 | 0.0 | 0.689485 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0334100 | RBH | 2.9770265 | 1.815401 | 1.955165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0017000 | RBH | 0.022990 | 0.0 | 0.149552 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0354800 | RBH | 3.323735 | 0.7889185 | 3.3031335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0016370 | RBH | 0.049846 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0016640 | RBH | 0.333292 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0016450 | RBH | 0.000000 | 3.847802 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0009480 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0016670 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G016830 | RBH | 0.080912 | 0.0 | 3.549453 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0016930 | RBH | 0.289608 | 2.408926 | 0.000000 |
