Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_08g0014160 OGI:08050830 | 15/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr08:19579973-19585257
Gene Symbol -
DNA seq

agagcattgaaaggctttgacagcaattcttgccagggtttaaatacaatacataaatcataaataaagcaccgactatttacgtccattgtgtttgtgtgcaccctgaatttcttataataacccaaaaagaaaaggtcaaattggctgcttttaaagctccagggtggagatccatttgctgcaattctgttgcttggctcaacaggcgccattgaattctgttactgccttcttagggaaagctgtaaaaagtacagatgataaaaacatattagtgtagttttaaacacactgtgcataccaacactttccagatcaccaaacttcccattgttttatcagaggcaagaaaccaaaagatagtcttgactaattattatccgaaaattttcagaaatatccaccaaaagtgcttcagcaaacacaatcagggtgaataaacaaagaaagattgaccagtccaatgataaaaacaatgaaattgcaggagccagttccctgcttaaattcatgcacaaaaagaggaggaaaaaaacatcaagagagatgatgtgagtgaatgcaagagggaactatcaggtcaacactgcttttgcaacaatcttaacggaaataaaactgcttctgcaacttcactttgctagctccaaggtctcgtttgccccatcgctctcgtaatagcgttgttcataatcttgcccagctaggtgtgagttgggacccaggtcactctttgggtagaccccctcacagattttgtaaatgttttggtgattcgtgatctcactgaatctacccagtaataagaatgtgtggttgaagctaaaaaaaactgatttgtttgagaataagaattggtcctgaagcttgcttggatgatgcatatgggcacatgggatacctccagagccctcttataactttgttgatcatcgtcataacctcctcctgaacaaagttctctacaccaataaatcagatactaatcctccagaccctataccatgtgagtgaacctaaagagagcatctccaagggccgcgacaagcctcgtgaacctttggtaagaaagagtactagaacatctgtaaacaagggaattacctatgcaaatgataatattttattggactattgagccatccaaatcaggaaaagagcttctagctagcaaccatttggtcagcaagaactagaaaacatctataaacaggggaagttgcctacgtcaatggtaatcttttattgaacttttgtgcaacccagattaggataagagtttcccagtgatcgacttcaaatatgtggctcgagaccacgacttgcaaacaaatgctgggcttccttacacagcaatgcataatagaccacaaatggagccaatttgtatacttgtataataactgtgacaaaatagcaatccttttctataagaacagcattattacaataaagcctgactgaccaacataaattagaacattctgtacctgtttaaaacatgcatgattgagccttctgttgagcttctgcatcgaattccaaatatgttactgacagtattgactattgaaggtagaaaaattagaaaaaatgtaaagggaccgccatagaaaaagaagggcagtgaaacaaataatgtattgcctcatccatattgcaaaaaatcacattacctaccaactttccattttgctgtaacatgattatccttagcaagagccacgcctttgaaatgatccacattaaaaattttgccttcaacaggactcatctacaaaatcaccatattcctcctttgtaaatgtgggttggttgggatggctgatgattgatctctccaatgcagccagcatagccaccttggccagtctggtttcatacttgtaatgaatacagcaatatatggttgtgaggcaggacagatgctctatgccaaacacaacattactgctgctggtgtggttttcttctgctaccatgcattcgaggttcagttgttgtagcttcggcaagcacccaatttcaaaagtcaactcaagcctgcaactttccccaccgattcggatacgttccaaggatgggaatccataactgctgctgatcctaagccttcctccctcctctgtaattacttcttccacatagagaatgagagagagcagggctggcagtcctcccagtgtactgacatcttcttgcgagagttccttcagatataaacctaatcgttggaggttgacaagtgagccaatccatcttggaaccctagacattggcgcctgattgatgacaagttcttgaagactcaatggaggagggcaccatggttcctggatgaagtcatctgctgatacggatgaaatatgaattgttagacaatgaaggttgtctctgcctagcttacatatggaagagatcattgctttcatatgacccttgtatctttctgccgcatcagcgtgatggccaggcataaatatactaagcttcctcaggtttgttaatttaccaagtccttgcagcgtgttcagtgactgcgcaagcacattcacaactttgagctcttgcaatgcttgcatgttcccaattttagccggcagttgacatctcatatcaacaagtagataagtcagttgtcgaagtcgataaatatgtgttggaatgttaattgcccctcttacatctacattcaatgtctgtaaacatcgtagtcttgttatttgagtcggaagcacattaacaattgtatctttgatgctgaggtacttcaggtgcaataaattctctatatttgcaaggtgatgattttctaactgctcacagccttcaaagtcgagcacatgcaaccgcctaaactgcaacaaagatgggactttcacagaatgtggaaaaatagttagcaatcgagcattgcacaaattcaacttttttaggatatgaaaaccgttactgttatcttcctgctcattgctatcatcttcttttttatccaggacatattttatgttattctcctccaaactgctataatactcttcagtattaacaaggagggatagccgccggaccttcttctgccgatcaataggaacgttaggaattcctaacaaggttacgaagttctcttcaatagactttgaccggatgaaatcaagaatcgtatcatgaactcgacaggatttcacctcaccgaacttgccaatataccttggctcaatcaaacttctattgatcagctcattgaaacacctctgccccaattcatataatgtatgtccatgttcctcgtgaataaatccctctgcaatccatcttctaaccaaccgttttttatgaataatataatcttctggaaatgtacatagatataatagacatgtacgcaagttatgaggaagatcaaagtaactaagcgacagtatccttatcattccattgacatcctcgtttctttccaatgcataaccaattgacttttccacttgattccattgatcttctgtcggtgcttttgtagccaataaaccggatattgcaatagttgccaagggtaaaccatcacattttgccaatatgttacaacaaacttcagtcaggtgtgatggacattcctccagaccaaaaattctcttcagaaacaacctttttgaatcaacaaaatgaagaggccttaatttatatacccgatgcacatgtgggaagcagcaagattcagctacttcatttatacgtgtggttgtgatgattcggctgccagtaatacttcttgaaaaagcacatctaataattttccaactttctatattccataagtcatcaatcacaataagatacctgccaatttttttattataagcatcagtagaaatatttgatcaaataaatgttagaaaggggatatttttcccatttcggtctcatgtcgtcctagaataattcaactaaagctgacttgttaaattaacacaaatctggtctcgcttctctaaatcatgtctcagttaggtgaaatgtgtcctcattgttactgattttgcatgattgtagctatggttgtaacacttatagcacatggatatttgattaaagaaatgtaacaaggcgggtagttctcagactccatccactaatgaatcagctaaaccataattcattcaacagccaagaatctggtccctcttgtcaaaaacaatatttttgttaggtgaaatgtgtcccttatggatactttattaaaaaatcataatgaaagtgagcagttttcatgtttggcaagactatgtcctcgaatgatttttgctcaacttttTgctatggttcaaacctatatttgtaaataaaatctgaaaagcagaatggtatgcacataagagagctgaatgcaagtaaaagaaaacacggactacttagcaagttggaccggcaaagaatgaactaaaggcttaaaatcttgaaggtctggccttataatacacacaccatatattttggagataagaatatatgattgaaggttagaattttgcataccttttgttcttaagggaaatagtgatttttctaatgagttgttgtatgtcccctgattcagtgttgccataaggttcggcgctaacttcactgagaataattctcaagattccagagatgtcagggtttcttgacacagacacaaaagcagaacaatcgaattgctccctcagctcctcaaagatgaggtttgcgatcgttgtcttacctaatcccccaattccaacaatggagatgatccttagatgctcggatgccacatgcccatcatctttcatcaacagatcgatgagctccttcttcggctgatcaaccccaactagagatgacacatcctgaaagatggtaagagctctttggtctacggtcgcattagctgtcctcatcaaactgatcccaccattcctatatcgcgcattcctctcccccacttctttgatttgtgccttgaactcagcaatcatcttggcaatccgacgccgggccatggtcttggtcagcaaattcctgcatttgacgatgaacccatccggattagcggatccgtcgacgacatggagcatgaactcgtcgaggctgtcctcgatgtcgtaggagagctcccgcacctccctcgtccaggccttgtcctgagggtcagcgttcccctcctccgaatccgacatcctgaggaggaacgcttgcatggcggcgagctcgtcggcgaggaaactgatctggccgcgcaccccttcgaattcgccggccat

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CDS seq

atggccggcgaattcgaaggggtgcgcggccagatcagtttcctcgccgacgagctcgccgccatgcaagcgttcctcctcaggatgtcggattcggaggaggggaacgctgaccctcaggacaaggcctggacgagggaggtgcgggagctctcctacgacatcgaggacagcctcgacgagttcatgctccatgtcgtcgacggatccgctaatccggatgggttcatcgtcaaatgcaggaatttgctgaccaagaccatggcccggcgtcggattgccaagatgattgctgagttcaaggcacaaatcaaagaagtgggggagaggaatgcgcgatataggaatggtgggatcagtttgatgaggacagctaatgcgaccgtagaccaaagagctcttaccatctttcaggatgtgtcatctctagttggggttgatcagccgaagaaggagctcatcgatctgttgatgaaagatgatgggcatgtggcatccgagcatctaaggatcatctccattgttggaattgggggattaggtaagacaacgatcgcaaacctcatctttgaggagctgagggagcaattcgattgttctgcttttgtgtctgtgtcaagaaaccctgacatctctggaatcttgagaattattctcagtgaagttagcgccgaaccttatggcaacactgaatcaggggacatacaacaactcattagaaaaatcactatttcccttaagaacaaaaggtatcttattgtgattgatgacttatggaatatagaaagttggaaaattattagatgtgctttttcaagaagtattactggcagccgaatcatcacaaccacacgtataaatgaagtagctgaatcttgctgcttcccacatgtgcatcgggtatataaattaaggcctcttcattttgttgattcaaaaaggttgtttctgaagagaatttttggtctggaggaatgtccatcacacctgactgaagtttgttgtaacatattggcaaaatgtgatggtttacccttggcaactattgcaatatccggtttattggctacaaaagcaccgacagaagatcaatggaatcaagtggaaaagtcaattggttatgcattggaaagaaacgaggatgtcaatggaatgataaggatactgtcgcttagttactttgatcttcctcataacttgcgtacatgtctattatatctatgtacatttccagaagattatattattcataaaaaacggttggttagaagatggattgcagagggatttattcacgaggaacatggacatacattatatgaattggggcagaggtgtttcaatgagctgatcaatagaagtttgattgagccaaggtatattggcaagttcggtgaggtgaaatcctgtcgagttcatgatacgattcttgatttcatccggtcaaagtctattgaagagaacttcgtaaccttgttaggaattcctaacgttcctattgatcggcagaagaaggtccggcggctatccctccttgttaatactgaagagtattatagcagtttggaggagaataacataaaatatgtcctggataaaaaagaagatgatagcaatgagcaggaagataacagtaacggttttcatatcctaaaaaagttgaatttgtgcaatgctcgattgctaactatttttccacattctgtgaaagtcccatctttgttgcagtttaggcggttgcatgtgctcgactttgaaggctgtgagcagttagaaaatcatcaccttgcaaatatagagaatttattgcacctgaagtacctcagcatcaaagatacaattgttaatgtgcttccgactcaaataacaagactacgatgtttacagacattgaatgtagatgtaagaggggcaattaacattccaacacatatttatcgacttcgacaactgacttatctacttgttgatatgagatgtcaactgccggctaaaattgggaacatgcaagcattgcaagagctcaaagttgtgaatgtgcttgcgcagtcactgaacacgctgcaaggacttggtaaattaacaaacctgaggaagcttagtatatttatgcctggccatcacgctgatgcggcagaaagatacaagggtcatatgaaagcaatgatctcttccatatgtaagctaggcagagacaaccttcattgtctaacaattcatatttcatccgtatcagcagatgacttcatccaggaaccatggtgccctcctccattgagtcttcaagaacttgtcatcaatcaggcgccaatgtctagggttccaagatggattggctcacttgtcaacctccaacgattaggtttatatctgaaggaactctcgcaagaagatgtcagtacactgggaggactgccagccctgctctctctcattctctatgtggaagaagtaattacagaggagggaggaaggcttaggatcagcagcagttatggattcccatccttggaacgtatccgaatcggtggggaaagttgcaggcttgagttgacttttgaaattgggtgcttgccgaagctacaacaactgaacctcgaatgcatggtagcagaagaaaaccacaccagcagcagtaatgttgtgtttggcatagagcatctgtcctgcctcacaaccatatattgctgtattcattacaagtatgaaaccagactggccaaggtggctatgctggctgcattggagagatcaatcatcagccatcccaaccaacccacatttacaaaggaggaatatggtgattttgtagatgagtcctgttga

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Protein seq

MAGEFEGVRGQISFLADELAAMQAFLLRMSDSEEGNADPQDKAWTREVRELSYDIEDSLDEFMLHVVDGSANPDGFIVKCRNLLTKTMARRRIAKMIAEFKAQIKEVGERNARYRNGGISLMRTANATVDQRALTIFQDVSSLVGVDQPKKELIDLLMKDDGHVASEHLRIISIVGIGGLGKTTIANLIFEELREQFDCSAFVSVSRNPDISGILRIILSEVSAEPYGNTESGDIQQLIRKITISLKNKRYLIVIDDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKRLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLIEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSSLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLHVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLRCLQTLNVDVRGAINIPTHIYRLRQLTYLLVDMRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSVSADDFIQEPWCPPPLSLQELVINQAPMSRVPRWIGSLVNLQRLGLYLKELSQEDVSTLGGLPALLSLILYVEEVITEEGGRLRISSSYGFPSLERIRIGGESCRLELTFEIGCLPKLQQLNLECMVAEENHTSSSNVVFGIEHLSCLTTIYCCIHYKYETRLAKVAMLAALERSIISHPNQPTFTKEEYGDFVDESC

Function Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_08g0014160 OsLiXu_08g0014160.01 Chr08 19579973 19585257 - NAM
CDS seq

atggccggcgaattcgaaggggtgcgcggccagatcagtttcctcgccgacgagctcgccgccatgcaagcgttcctcctcaggatgtcggattcggaggaggggaacgctgaccctcaggacaaggcctggacgagggaggtgcgggagctctcctacgacatcgaggacagcctcgacgagttcatgctccatgtcgtcgacggatccgctaatccggatgggttcatcgtcaaatgcaggaatttgctgaccaagaccatggcccggcgtcggattgccaagatgattgctgagttcaaggcacaaatcaaagaagtgggggagaggaatgcgcgatataggaatggtgggatcagtttgatgaggacagctaatgcgaccgtagaccaaagagctcttaccatctttcaggatgtgtcatctctagttggggttgatcagccgaagaaggagctcatcgatctgttgatgaaagatgatgggcatgtggcatccgagcatctaaggatcatctccattgttggaattgggggattaggtaagacaacgatcgcaaacctcatctttgaggagctgagggagcaattcgattgttctgcttttgtgtctgtgtcaagaaaccctgacatctctggaatcttgagaattattctcagtgaagttagcgccgaaccttatggcaacactgaatcaggggacatacaacaactcattagaaaaatcactatttcccttaagaacaaaaggtatcttattgtgattgatgacttatggaatatagaaagttggaaaattattagatgtgctttttcaagaagtattactggcagccgaatcatcacaaccacacgtataaatgaagtagctgaatcttgctgcttcccacatgtgcatcgggtatataaattaaggcctcttcattttgttgattcaaaaaggttgtttctgaagagaatttttggtctggaggaatgtccatcacacctgactgaagtttgttgtaacatattggcaaaatgtgatggtttacccttggcaactattgcaatatccggtttattggctacaaaagcaccgacagaagatcaatggaatcaagtggaaaagtcaattggttatgcattggaaagaaacgaggatgtcaatggaatgataaggatactgtcgcttagttactttgatcttcctcataacttgcgtacatgtctattatatctatgtacatttccagaagattatattattcataaaaaacggttggttagaagatggattgcagagggatttattcacgaggaacatggacatacattatatgaattggggcagaggtgtttcaatgagctgatcaatagaagtttgattgagccaaggtatattggcaagttcggtgaggtgaaatcctgtcgagttcatgatacgattcttgatttcatccggtcaaagtctattgaagagaacttcgtaaccttgttaggaattcctaacgttcctattgatcggcagaagaaggtccggcggctatccctccttgttaatactgaagagtattatagcagtttggaggagaataacataaaatatgtcctggataaaaaagaagatgatagcaatgagcaggaagataacagtaacggttttcatatcctaaaaaagttgaatttgtgcaatgctcgattgctaactatttttccacattctgtgaaagtcccatctttgttgcagtttaggcggttgcatgtgctcgactttgaaggctgtgagcagttagaaaatcatcaccttgcaaatatagagaatttattgcacctgaagtacctcagcatcaaagatacaattgttaatgtgcttccgactcaaataacaagactacgatgtttacagacattgaatgtagatgtaagaggggcaattaacattccaacacatatttatcgacttcgacaactgacttatctacttgttgatatgagatgtcaactgccggctaaaattgggaacatgcaagcattgcaagagctcaaagttgtgaatgtgcttgcgcagtcactgaacacgctgcaaggacttggtaaattaacaaacctgaggaagcttagtatatttatgcctggccatcacgctgatgcggcagaaagatacaagggtcatatgaaagcaatgatctcttccatatgtaagctaggcagagacaaccttcattgtctaacaattcatatttcatccgtatcagcagatgacttcatccaggaaccatggtgccctcctccattgagtcttcaagaacttgtcatcaatcaggcgccaatgtctagggttccaagatggattggctcacttgtcaacctccaacgattaggtttatatctgaaggaactctcgcaagaagatgtcagtacactgggaggactgccagccctgctctctctcattctctatgtggaagaagtaattacagaggagggaggaaggcttaggatcagcagcagttatggattcccatccttggaacgtatccgaatcggtggggaaagttgcaggcttgagttgacttttgaaattgggtgcttgccgaagctacaacaactgaacctcgaatgcatggtagcagaagaaaaccacaccagcagcagtaatgttgtgtttggcatagagcatctgtcctgcctcacaaccatatattgctgtattcattacaagtatgaaaccagactggccaaggtggctatgctggctgcattggagagatcaatcatcagccatcccaaccaacccacatttacaaaggaggaatatggtgattttgtagatgagtcctgttga

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Protein seq

MAGEFEGVRGQISFLADELAAMQAFLLRMSDSEEGNADPQDKAWTREVRELSYDIEDSLDEFMLHVVDGSANPDGFIVKCRNLLTKTMARRRIAKMIAEFKAQIKEVGERNARYRNGGISLMRTANATVDQRALTIFQDVSSLVGVDQPKKELIDLLMKDDGHVASEHLRIISIVGIGGLGKTTIANLIFEELREQFDCSAFVSVSRNPDISGILRIILSEVSAEPYGNTESGDIQQLIRKITISLKNKRYLIVIDDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKRLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLIEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSSLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLHVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLRCLQTLNVDVRGAINIPTHIYRLRQLTYLLVDMRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSVSADDFIQEPWCPPPLSLQELVINQAPMSRVPRWIGSLVNLQRLGLYLKELSQEDVSTLGGLPALLSLILYVEEVITEEGGRLRISSSYGFPSLERIRIGGESCRLELTFEIGCLPKLQQLNLECMVAEENHTSSSNVVFGIEHLSCLTTIYCCIHYKYETRLAKVAMLAALERSIISHPNQPTFTKEEYGDFVDESC

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.095778

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0372700 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g28460 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os08g0372700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_08g0013950 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0013850 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0013820 RBH 0.000000 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0014120 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0013810 RBH 0.319448 1.053732 2.538685
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0272900 SBH 0.3876755 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0013860 RBH 0.0 0.207822 0.071550
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0296600 RBH 0.627192 2.404151 2.5652645
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0013360 RBH 0.0 0.074159 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0013430 RBH 0.0 2.518415 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0013370 RBH 0.000000 5.256235 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0044630 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0013480 RBH 0.0 1.269453 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G013560 RBH 0.000000 1.926394 0.728416
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0013640 RBH 0.0 0.0 0.239521
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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