Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_08g0014160 | OGI:08050830 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr08:19579973-19585257 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | agagcattgaaaggctttgacagcaattcttgccagggtttaaatacaatacataaatcataaataaagcaccgactatttacgtccattgtgtttgtgtgcaccctgaatttcttataataacccaaaaagaaaaggtcaaattggctgcttttaaagctccagggtggagatccatttgctgcaattctgttgcttggctcaacaggcgccattgaattctgttactgccttcttagggaaagctgtaaaaagtacagatgataaaaacatattagtgtagttttaaacacactgtgcataccaacactttccagatcaccaaacttcccattgttttatcagaggcaagaaaccaaaagatagtcttgactaattattatccgaaaattttcagaaatatccaccaaaagtgcttcagcaaacacaatcagggtgaataaacaaagaaagattgaccagtccaatgataaaaacaatgaaattgcaggagccagttccctgcttaaattcatgcacaaaaagaggaggaaaaaaacatcaagagagatgatgtgagtgaatgcaagagggaactatcaggtcaacactgcttttgcaacaatcttaacggaaataaaactgcttctgcaacttcactttgctagctccaaggtctcgtttgccccatcgctctcgtaatagcgttgttcataatcttgcccagctaggtgtgagttgggacccaggtcactctttgggtagaccccctcacagattttgtaaatgttttggtgattcgtgatctcactgaatctacccagtaataagaatgtgtggttgaagctaaaaaaaactgatttgtttgagaataagaattggtcctgaagcttgcttggatgatgcatatgggcacatgggatacctccagagccctcttataactttgttgatcatcgtcataacctcctcctgaacaaagttctctacaccaataaatcagatactaatcctccagaccctataccatgtgagtgaacctaaagagagcatctccaagggccgcgacaagcctcgtgaacctttggtaagaaagagtactagaacatctgtaaacaagggaattacctatgcaaatgataatattttattggactattgagccatccaaatcaggaaaagagcttctagctagcaaccatttggtcagcaagaactagaaaacatctataaacaggggaagttgcctacgtcaatggtaatcttttattgaacttttgtgcaacccagattaggataagagtttcccagtgatcgacttcaaatatgtggctcgagaccacgacttgcaaacaaatgctgggcttccttacacagcaatgcataatagaccacaaatggagccaatttgtatacttgtataataactgtgacaaaatagcaatccttttctataagaacagcattattacaataaagcctgactgaccaacataaattagaacattctgtacctgtttaaaacatgcatgattgagccttctgttgagcttctgcatcgaattccaaatatgttactgacagtattgactattgaaggtagaaaaattagaaaaaatgtaaagggaccgccatagaaaaagaagggcagtgaaacaaataatgtattgcctcatccatattgcaaaaaatcacattacctaccaactttccattttgctgtaacatgattatccttagcaagagccacgcctttgaaatgatccacattaaaaattttgccttcaacaggactcatctacaaaatcaccatattcctcctttgtaaatgtgggttggttgggatggctgatgattgatctctccaatgcagccagcatagccaccttggccagtctggtttcatacttgtaatgaatacagcaatatatggttgtgaggcaggacagatgctctatgccaaacacaacattactgctgctggtgtggttttcttctgctaccatgcattcgaggttcagttgttgtagcttcggcaagcacccaatttcaaaagtcaactcaagcctgcaactttccccaccgattcggatacgttccaaggatgggaatccataactgctgctgatcctaagccttcctccctcctctgtaattacttcttccacatagagaatgagagagagcagggctggcagtcctcccagtgtactgacatcttcttgcgagagttccttcagatataaacctaatcgttggaggttgacaagtgagccaatccatcttggaaccctagacattggcgcctgattgatgacaagttcttgaagactcaatggaggagggcaccatggttcctggatgaagtcatctgctgatacggatgaaatatgaattgttagacaatgaaggttgtctctgcctagcttacatatggaagagatcattgctttcatatgacccttgtatctttctgccgcatcagcgtgatggccaggcataaatatactaagcttcctcaggtttgttaatttaccaagtccttgcagcgtgttcagtgactgcgcaagcacattcacaactttgagctcttgcaatgcttgcatgttcccaattttagccggcagttgacatctcatatcaacaagtagataagtcagttgtcgaagtcgataaatatgtgttggaatgttaattgcccctcttacatctacattcaatgtctgtaaacatcgtagtcttgttatttgagtcggaagcacattaacaattgtatctttgatgctgaggtacttcaggtgcaataaattctctatatttgcaaggtgatgattttctaactgctcacagccttcaaagtcgagcacatgcaaccgcctaaactgcaacaaagatgggactttcacagaatgtggaaaaatagttagcaatcgagcattgcacaaattcaacttttttaggatatgaaaaccgttactgttatcttcctgctcattgctatcatcttcttttttatccaggacatattttatgttattctcctccaaactgctataatactcttcagtattaacaaggagggatagccgccggaccttcttctgccgatcaataggaacgttaggaattcctaacaaggttacgaagttctcttcaatagactttgaccggatgaaatcaagaatcgtatcatgaactcgacaggatttcacctcaccgaacttgccaatataccttggctcaatcaaacttctattgatcagctcattgaaacacctctgccccaattcatataatgtatgtccatgttcctcgtgaataaatccctctgcaatccatcttctaaccaaccgttttttatgaataatataatcttctggaaatgtacatagatataatagacatgtacgcaagttatgaggaagatcaaagtaactaagcgacagtatccttatcattccattgacatcctcgtttctttccaatgcataaccaattgacttttccacttgattccattgatcttctgtcggtgcttttgtagccaataaaccggatattgcaatagttgccaagggtaaaccatcacattttgccaatatgttacaacaaacttcagtcaggtgtgatggacattcctccagaccaaaaattctcttcagaaacaacctttttgaatcaacaaaatgaagaggccttaatttatatacccgatgcacatgtgggaagcagcaagattcagctacttcatttatacgtgtggttgtgatgattcggctgccagtaatacttcttgaaaaagcacatctaataattttccaactttctatattccataagtcatcaatcacaataagatacctgccaatttttttattataagcatcagtagaaatatttgatcaaataaatgttagaaaggggatatttttcccatttcggtctcatgtcgtcctagaataattcaactaaagctgacttgttaaattaacacaaatctggtctcgcttctctaaatcatgtctcagttaggtgaaatgtgtcctcattgttactgattttgcatgattgtagctatggttgtaacacttatagcacatggatatttgattaaagaaatgtaacaaggcgggtagttctcagactccatccactaatgaatcagctaaaccataattcattcaacagccaagaatctggtccctcttgtcaaaaacaatatttttgttaggtgaaatgtgtcccttatggatactttattaaaaaatcataatgaaagtgagcagttttcatgtttggcaagactatgtcctcgaatgatttttgctcaacttttTgctatggttcaaacctatatttgtaaataaaatctgaaaagcagaatggtatgcacataagagagctgaatgcaagtaaaagaaaacacggactacttagcaagttggaccggcaaagaatgaactaaaggcttaaaatcttgaaggtctggccttataatacacacaccatatattttggagataagaatatatgattgaaggttagaattttgcataccttttgttcttaagggaaatagtgatttttctaatgagttgttgtatgtcccctgattcagtgttgccataaggttcggcgctaacttcactgagaataattctcaagattccagagatgtcagggtttcttgacacagacacaaaagcagaacaatcgaattgctccctcagctcctcaaagatgaggtttgcgatcgttgtcttacctaatcccccaattccaacaatggagatgatccttagatgctcggatgccacatgcccatcatctttcatcaacagatcgatgagctccttcttcggctgatcaaccccaactagagatgacacatcctgaaagatggtaagagctctttggtctacggtcgcattagctgtcctcatcaaactgatcccaccattcctatatcgcgcattcctctcccccacttctttgatttgtgccttgaactcagcaatcatcttggcaatccgacgccgggccatggtcttggtcagcaaattcctgcatttgacgatgaacccatccggattagcggatccgtcgacgacatggagcatgaactcgtcgaggctgtcctcgatgtcgtaggagagctcccgcacctccctcgtccaggccttgtcctgagggtcagcgttcccctcctccgaatccgacatcctgaggaggaacgcttgcatggcggcgagctcgtcggcgaggaaactgatctggccgcgcaccccttcgaattcgccggccat
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CDS seq | atggccggcgaattcgaaggggtgcgcggccagatcagtttcctcgccgacgagctcgccgccatgcaagcgttcctcctcaggatgtcggattcggaggaggggaacgctgaccctcaggacaaggcctggacgagggaggtgcgggagctctcctacgacatcgaggacagcctcgacgagttcatgctccatgtcgtcgacggatccgctaatccggatgggttcatcgtcaaatgcaggaatttgctgaccaagaccatggcccggcgtcggattgccaagatgattgctgagttcaaggcacaaatcaaagaagtgggggagaggaatgcgcgatataggaatggtgggatcagtttgatgaggacagctaatgcgaccgtagaccaaagagctcttaccatctttcaggatgtgtcatctctagttggggttgatcagccgaagaaggagctcatcgatctgttgatgaaagatgatgggcatgtggcatccgagcatctaaggatcatctccattgttggaattgggggattaggtaagacaacgatcgcaaacctcatctttgaggagctgagggagcaattcgattgttctgcttttgtgtctgtgtcaagaaaccctgacatctctggaatcttgagaattattctcagtgaagttagcgccgaaccttatggcaacactgaatcaggggacatacaacaactcattagaaaaatcactatttcccttaagaacaaaaggtatcttattgtgattgatgacttatggaatatagaaagttggaaaattattagatgtgctttttcaagaagtattactggcagccgaatcatcacaaccacacgtataaatgaagtagctgaatcttgctgcttcccacatgtgcatcgggtatataaattaaggcctcttcattttgttgattcaaaaaggttgtttctgaagagaatttttggtctggaggaatgtccatcacacctgactgaagtttgttgtaacatattggcaaaatgtgatggtttacccttggcaactattgcaatatccggtttattggctacaaaagcaccgacagaagatcaatggaatcaagtggaaaagtcaattggttatgcattggaaagaaacgaggatgtcaatggaatgataaggatactgtcgcttagttactttgatcttcctcataacttgcgtacatgtctattatatctatgtacatttccagaagattatattattcataaaaaacggttggttagaagatggattgcagagggatttattcacgaggaacatggacatacattatatgaattggggcagaggtgtttcaatgagctgatcaatagaagtttgattgagccaaggtatattggcaagttcggtgaggtgaaatcctgtcgagttcatgatacgattcttgatttcatccggtcaaagtctattgaagagaacttcgtaaccttgttaggaattcctaacgttcctattgatcggcagaagaaggtccggcggctatccctccttgttaatactgaagagtattatagcagtttggaggagaataacataaaatatgtcctggataaaaaagaagatgatagcaatgagcaggaagataacagtaacggttttcatatcctaaaaaagttgaatttgtgcaatgctcgattgctaactatttttccacattctgtgaaagtcccatctttgttgcagtttaggcggttgcatgtgctcgactttgaaggctgtgagcagttagaaaatcatcaccttgcaaatatagagaatttattgcacctgaagtacctcagcatcaaagatacaattgttaatgtgcttccgactcaaataacaagactacgatgtttacagacattgaatgtagatgtaagaggggcaattaacattccaacacatatttatcgacttcgacaactgacttatctacttgttgatatgagatgtcaactgccggctaaaattgggaacatgcaagcattgcaagagctcaaagttgtgaatgtgcttgcgcagtcactgaacacgctgcaaggacttggtaaattaacaaacctgaggaagcttagtatatttatgcctggccatcacgctgatgcggcagaaagatacaagggtcatatgaaagcaatgatctcttccatatgtaagctaggcagagacaaccttcattgtctaacaattcatatttcatccgtatcagcagatgacttcatccaggaaccatggtgccctcctccattgagtcttcaagaacttgtcatcaatcaggcgccaatgtctagggttccaagatggattggctcacttgtcaacctccaacgattaggtttatatctgaaggaactctcgcaagaagatgtcagtacactgggaggactgccagccctgctctctctcattctctatgtggaagaagtaattacagaggagggaggaaggcttaggatcagcagcagttatggattcccatccttggaacgtatccgaatcggtggggaaagttgcaggcttgagttgacttttgaaattgggtgcttgccgaagctacaacaactgaacctcgaatgcatggtagcagaagaaaaccacaccagcagcagtaatgttgtgtttggcatagagcatctgtcctgcctcacaaccatatattgctgtattcattacaagtatgaaaccagactggccaaggtggctatgctggctgcattggagagatcaatcatcagccatcccaaccaacccacatttacaaaggaggaatatggtgattttgtagatgagtcctgttga
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Protein seq | MAGEFEGVRGQISFLADELAAMQAFLLRMSDSEEGNADPQDKAWTREVRELSYDIEDSLDEFMLHVVDGSANPDGFIVKCRNLLTKTMARRRIAKMIAEFKAQIKEVGERNARYRNGGISLMRTANATVDQRALTIFQDVSSLVGVDQPKKELIDLLMKDDGHVASEHLRIISIVGIGGLGKTTIANLIFEELREQFDCSAFVSVSRNPDISGILRIILSEVSAEPYGNTESGDIQQLIRKITISLKNKRYLIVIDDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKRLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLIEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSSLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLHVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLRCLQTLNVDVRGAINIPTHIYRLRQLTYLLVDMRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSVSADDFIQEPWCPPPLSLQELVINQAPMSRVPRWIGSLVNLQRLGLYLKELSQEDVSTLGGLPALLSLILYVEEVITEEGGRLRISSSYGFPSLERIRIGGESCRLELTFEIGCLPKLQQLNLECMVAEENHTSSSNVVFGIEHLSCLTTIYCCIHYKYETRLAKVAMLAALERSIISHPNQPTFTKEEYGDFVDESC |
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Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_08g0014160 | OsLiXu_08g0014160.01 | Chr08 | 19579973 | 19585257 | - | NAM | ||
CDS seq | atggccggcgaattcgaaggggtgcgcggccagatcagtttcctcgccgacgagctcgccgccatgcaagcgttcctcctcaggatgtcggattcggaggaggggaacgctgaccctcaggacaaggcctggacgagggaggtgcgggagctctcctacgacatcgaggacagcctcgacgagttcatgctccatgtcgtcgacggatccgctaatccggatgggttcatcgtcaaatgcaggaatttgctgaccaagaccatggcccggcgtcggattgccaagatgattgctgagttcaaggcacaaatcaaagaagtgggggagaggaatgcgcgatataggaatggtgggatcagtttgatgaggacagctaatgcgaccgtagaccaaagagctcttaccatctttcaggatgtgtcatctctagttggggttgatcagccgaagaaggagctcatcgatctgttgatgaaagatgatgggcatgtggcatccgagcatctaaggatcatctccattgttggaattgggggattaggtaagacaacgatcgcaaacctcatctttgaggagctgagggagcaattcgattgttctgcttttgtgtctgtgtcaagaaaccctgacatctctggaatcttgagaattattctcagtgaagttagcgccgaaccttatggcaacactgaatcaggggacatacaacaactcattagaaaaatcactatttcccttaagaacaaaaggtatcttattgtgattgatgacttatggaatatagaaagttggaaaattattagatgtgctttttcaagaagtattactggcagccgaatcatcacaaccacacgtataaatgaagtagctgaatcttgctgcttcccacatgtgcatcgggtatataaattaaggcctcttcattttgttgattcaaaaaggttgtttctgaagagaatttttggtctggaggaatgtccatcacacctgactgaagtttgttgtaacatattggcaaaatgtgatggtttacccttggcaactattgcaatatccggtttattggctacaaaagcaccgacagaagatcaatggaatcaagtggaaaagtcaattggttatgcattggaaagaaacgaggatgtcaatggaatgataaggatactgtcgcttagttactttgatcttcctcataacttgcgtacatgtctattatatctatgtacatttccagaagattatattattcataaaaaacggttggttagaagatggattgcagagggatttattcacgaggaacatggacatacattatatgaattggggcagaggtgtttcaatgagctgatcaatagaagtttgattgagccaaggtatattggcaagttcggtgaggtgaaatcctgtcgagttcatgatacgattcttgatttcatccggtcaaagtctattgaagagaacttcgtaaccttgttaggaattcctaacgttcctattgatcggcagaagaaggtccggcggctatccctccttgttaatactgaagagtattatagcagtttggaggagaataacataaaatatgtcctggataaaaaagaagatgatagcaatgagcaggaagataacagtaacggttttcatatcctaaaaaagttgaatttgtgcaatgctcgattgctaactatttttccacattctgtgaaagtcccatctttgttgcagtttaggcggttgcatgtgctcgactttgaaggctgtgagcagttagaaaatcatcaccttgcaaatatagagaatttattgcacctgaagtacctcagcatcaaagatacaattgttaatgtgcttccgactcaaataacaagactacgatgtttacagacattgaatgtagatgtaagaggggcaattaacattccaacacatatttatcgacttcgacaactgacttatctacttgttgatatgagatgtcaactgccggctaaaattgggaacatgcaagcattgcaagagctcaaagttgtgaatgtgcttgcgcagtcactgaacacgctgcaaggacttggtaaattaacaaacctgaggaagcttagtatatttatgcctggccatcacgctgatgcggcagaaagatacaagggtcatatgaaagcaatgatctcttccatatgtaagctaggcagagacaaccttcattgtctaacaattcatatttcatccgtatcagcagatgacttcatccaggaaccatggtgccctcctccattgagtcttcaagaacttgtcatcaatcaggcgccaatgtctagggttccaagatggattggctcacttgtcaacctccaacgattaggtttatatctgaaggaactctcgcaagaagatgtcagtacactgggaggactgccagccctgctctctctcattctctatgtggaagaagtaattacagaggagggaggaaggcttaggatcagcagcagttatggattcccatccttggaacgtatccgaatcggtggggaaagttgcaggcttgagttgacttttgaaattgggtgcttgccgaagctacaacaactgaacctcgaatgcatggtagcagaagaaaaccacaccagcagcagtaatgttgtgtttggcatagagcatctgtcctgcctcacaaccatatattgctgtattcattacaagtatgaaaccagactggccaaggtggctatgctggctgcattggagagatcaatcatcagccatcccaaccaacccacatttacaaaggaggaatatggtgattttgtagatgagtcctgttga
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Protein seq | MAGEFEGVRGQISFLADELAAMQAFLLRMSDSEEGNADPQDKAWTREVRELSYDIEDSLDEFMLHVVDGSANPDGFIVKCRNLLTKTMARRRIAKMIAEFKAQIKEVGERNARYRNGGISLMRTANATVDQRALTIFQDVSSLVGVDQPKKELIDLLMKDDGHVASEHLRIISIVGIGGLGKTTIANLIFEELREQFDCSAFVSVSRNPDISGILRIILSEVSAEPYGNTESGDIQQLIRKITISLKNKRYLIVIDDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKRLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLIEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSSLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLHVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLRCLQTLNVDVRGAINIPTHIYRLRQLTYLLVDMRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSVSADDFIQEPWCPPPLSLQELVINQAPMSRVPRWIGSLVNLQRLGLYLKELSQEDVSTLGGLPALLSLILYVEEVITEEGGRLRISSSYGFPSLERIRIGGESCRLELTFEIGCLPKLQQLNLECMVAEENHTSSSNVVFGIEHLSCLTTIYCCIHYKYETRLAKVAMLAALERSIISHPNQPTFTKEEYGDFVDESC
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.095778 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0372700 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g28460 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os08g0372700 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0013950 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0013850 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0013820 | RBH | 0.000000 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0014120 | RBH | 0.0 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0013810 | RBH | 0.319448 | 1.053732 | 2.538685 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0272900 | SBH | 0.3876755 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0013860 | RBH | 0.0 | 0.207822 | 0.071550 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0296600 | RBH | 0.627192 | 2.404151 | 2.5652645 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0013360 | RBH | 0.0 | 0.074159 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0013430 | RBH | 0.0 | 2.518415 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0013370 | RBH | 0.000000 | 5.256235 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0044630 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0013480 | RBH | 0.0 | 1.269453 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G013560 | RBH | 0.000000 | 1.926394 | 0.728416 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0013640 | RBH | 0.0 | 0.0 | 0.239521 |