Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_08g0013370 | OGI:08050830 | 15/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr08:18363748-18369337 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agcattgaaaggctctgacagcaattcttgccagggtttaaatacaatatataaatcataaataaagcatcgactatttacgtccattgtgtttgtgtgcaccctgaatttcttatatataataacccaaaaagaaaagatcaaattggttgcttttaaagctccagggtggagatccatttgctgcaattctgttgcttggctcaacaagcgccattgaattctgttactaccttcttagggaaagctgtaaaaagtacaaatgataaaaacatattagtgtagttttaaacacactgtgcataccaacactttccatatcaccaaacttcccattgttttatcagagtcaaagaaaccaaaagatagtcttgactaattattatccgaaaattttcagaaatatccaccAaaagtgcttcagcaaacacaatcagggtgaataaacaaagaaagattgaccagtccaatgataaaaacaatgaaaattgcaggagccagtaccctgcttaaatttacacacaaaaagaggaaaaaacatcaagagagatgatgtgagtgaatgcaagagggaactatcacacacaaaaagaggaaaaaacatcaagagagatgatgtgactgaatgcaagagggaactatcaggtcaacactgcttttgcaacaatcttcacagaactaaaactggttctgcaacttcactttgctagctccaaggtctcgtttgccccctcgctctcgtaatagcgttggtcataatcttgcccagctaggtgtgagttgggacccaggtcactctttggtttgggtagaccccctcacagattttgtaaatgttttggtgattcgtgatctcactgaatctacccagtaataaaaatgtgtggttgaagctaaaaaaaacactgatttgtttgagaacaagaattggtcctgaagcttgcttggatgatgcatatgggcacatgggatgccaccagagccctcttataactttgttgatcatcgtcataacctcctcctgaacaaagttctctacaccaataaatcagatactaatcctccagaccctataccatgtgagtgaacctaaagagagcatctccaagggccgtgataagcctcgtcaacctttggtaagaaagaactagaacatctgtaaacaggggaattacctatgcaaatgataatattttattggactattgagccatccaaatcaggaaaagagcttctagctagcaaccatttggtcagcaagaactagaaaacatctataaacaggggaagttgcctacgtcaatggtaatcttttattggactattgtgcagcccagattaggataagagcttcccagtgatcgacttcaaatatgtggctcgagaccacgacttgcaaacaaatgctgggcttccttacacagcaatgcataatagaccacaaatggagccaatttgtatacttgtataataactgtgacaaaatagcaatccttttctataagaacagcattattacaataaagcctaactgaccaacataaattagaacattctgtacctgtttaaaacatgcatgattgagccttctgttgagcttctgcatcgaattccaaatatgttactgacagtattgactattgaaggtagaaaaattagaaaaaatgtaaagggaccgccatagaaaaagaagggcagtgaaacatataatgtattgcctcatccatattgcaaaaaatcacattacctaccaactttccattttgctgtaacatgattatccttagcaagagccacgcctttgaaatgatccacattaaaaattttaccttcaacaggactcatctacaaaatcaccatattcctcctttgtaaatgtgggttggttgggatggctgatgattgatctctccaatgcagccagcatagccaccttggccagtctggtttcatacttgtaatgaatacagcaatatatgcttgtgaggcgggacagatgctctatgccaaacacaacattactgctgctggtgtggttttcttctgctaccatgcattcgaggttcagttgttgtagcttcggcaagcacccaacttcaaaagtcaactcaagcctgcaactttccccaccgagtcggatacgttccaaggatgggaatccataactgctgctgatcctaagccttcctccctcctctgtaattacttcttccacatagagtatgagagagagcagggctggcagtcctcccagtgtactgacatcttcttgcgagagttccttcagatataaacctaatcgttggaggttgacaagtGAgccaatccatcttggaaccctagacattggcgcctgattgatgacaagttcttgaagactcaatgtaggagggcaccatggttcctggatgaagtcatctgcttatacagatgaaatatgaattgttagacaatgaaggttgTCtctgcctagcttacatatGgaagagatcattgctttcatatgacccttgtatctttctgccgcatcagcgtgatggccaggcataaatatactaagcttcctcaggtttgttaatttaccaagtccttgcagcgtgttcagtgactgcgcaagcacattcacaactttgagctcttgcaatgcttgcatgttcccaattttagccggcagttgacatctcatatcaacaagtagataagtcagttgtcgaagtcgataaatatgtgttggaatgttaattgCccctcttacatctacattcaatgtctgtaaatattgtagtcttgttatttgagtcggaagcacattaacaattgtatctttgatgctgaggtacttcaggtgcaataaattctctatatttgcaaggtgatgattttctaactgctcacaGccttcaaagtcgagcacacgcaaccgcctaaattgcaacaaagatgggactttcacagaatgtggaaaaatagttagcaatcgagcattgcacaaattcaacttttttaggatatgaaaaccgttactgttatcttcctgctcattgctatcatcttcttttttatccaggacatattttatgttattctcctccaaactgctataatactcttcagtattaacaaggagggatagccgccggaccttcttctgccgatcaataggaacgttaggaattcctaacaaggttacgaagttctcttcaatagactttgaccggatgaaatcaagaatcgtatcatgaactcgacaggatttcacctcaccgaacttgccaatataccttggctcaatcaaacttctattgatcagctcattgaaacacctctgccccaattcatataaagtatgtccatgttcctcgtgaataaatccctctgcaatccatcttctaaccaaccgttttttatgaataATataatcttctggaaatgtacatagatataatagacatgtacgcaagttatgaggaagatcaaagtaactaagcgacagtatccttatcattccattgacatcctcgtttctttccaatgcataaccaattgacttttccacttgattccattgatcttctgtcggtgcttttgtagccaataaaccggatattgcaatagttgccaacggtaaaccatcacattttgccaatatattacaacaaacttcagtcaggtgtgatggacattcctccagaccaaaaattctcttcagAaacaacctttttgaatcaacaaaatgaagaggccttaatttatatacccgatgcacatgtgggaagcagcaagattcagctacttcatttatacgtgtggttgtgatgattcggctgccagtaatacttcttgaaaaagcacatctaataattttccaactttctatattccataagtcatcaatcacaataagatacctgccaatttttttattacaagcatcagtagaaatatttgatctaataaatgttagaaaggggatatttttcccatttcggtctcatgtcgtcctagaataattcaactaaagctgacttgttaaattaacacaaatctggtctcgcttctctaaatcatgtctcagttaggtgaaatgtgtcctcattgttactgattttgcatgattgtagctatggttgtaacacttatagcacatggatatttgattaaagaaatgtaacaaggcgggtagttctcagactccatccactaatgaatcagctaaaccataattcattcaacagccaagaatctggtccctcttgtcaaaaacaatatttttgttaggtgaaatgtgtcccttatggatactttattaaaaaatcataatgaaagtgagaagttttcatgtttggcaagactatgtcctcgaatgatttttgctcaactttttgctatggttcaaacctatatttgtaaataaaatctgaaaagcagaatggtatgcacataagagagctgaatgcaagtaaaagaaaacacggactacttagcaagttggaccggcaaagaatgaactaaaggcttaaaatcttgaaggtctggccttataatacacacaccatatattttggagacaagaatatatgattgatggttagaattttgcataccttttgttcttaagggacgtagtgatttttctaatgagttgttgtatgtcccctgattcagtgttgccataaggttcggcactaacttcattgagaataattctcaagattccagagatgtcagggtttcttgacacagacacaaaagcagaacaatcgaattgctccttcagctcctcaaagatgaggtttgcgatcgttgtcttccctaatcccccaattccaacgatggatatgacccttagatgctcggatgccacatgcccatcatctttcatcaacaaatcaatgagctccttcttcggcagatcaattccaactagagatgacacatcctgaaagatggtaagagctctttggtctacagtcgcattggctgtcctcaaactgatcccaccattgctcctgtaccttgcatttctctccccaacttgtttgatttgtgccttgaactctccaatcatctttggaatccgatgccgcgccacgatcttggccagcaaattcctgcatttgtcgatgaacccatctggattagcggattcgccatctagatggagcatgaactcgtcgaggctgtcctcgatgtcgtaggagagctcccgcacctccctcatccaggccttgtcctgagggtcagcgttctcctcctccgaatccgacatcctgaggacgaacgcgtgcatggcggcgaactcgtcggcgaggaaactgatttggccgcgcaccccgttggagcgcgtgtcgccagccatggcggcgagcttcaccagcacggacttgagtgccccggtggccgcggtcaccagaaacccctccatatgctcctcgagcgtacgcaaagaaagatcccgcgaaacagaagcagaagcagatctatagatcagcaggtggggaatcaacacagaccgcaaaagacggcgggggcgattgttgattgatggccggagctcaccgccgtgatcctggggaagctcggcggcaag
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| CDS seq | atggaggggtttctggtgaccgcggccaccggggcactcaagtccgtgctggtgaagctcgccgccatggctggcgacacgcgctccaacggggtgcgcggccaaatcagtttcctcgccgacgagttcgccgccatgcacgcgttcgtcctcaggatgtcggattcggaggaggagaacgctgaccctcaggacaaggcctggatgagggaggtgcgggagctctcctacgacatcgaggacagcctcgacgagttcatgctccatctagatggcgaatccgctaatccagatgggttcatcgacaaatgcaggaatttgctggccaagatcgtggcgcggcatcggattccaaagatgattggagagttcaaggcacaaatcaaacaagttggggagagaaatgcaaggtacaggagcaatggtgggatcagtttgaggacagccaatgcgactgtagaccaaagagctcttaccatctttcaggatgtgtcatctctagttggaattgatctgccgaagaaggagctcattgatttgttgatgaaagatgatgggcatgtggcatccgagcatctaagggtcatatccatcgttggaattgggggattagggaagacaacgatcgcaaacctcatctttgaggagctgaaggagcaattcgattgttctgcttttgtgtctgtgtcaagaaaccctgacatctctggaatcttgagaattattctcaatgaagttagtgccgaaccttatggcaacactgaatcaggggacatacaacaactcattagaaaaatcactacgtcccttaagaacaaaaggtatcttattgtgattgatgacttatggaatatagaaagttggaaaattattagatgtgctttttcaagaagtattactggcagccgaatcatcacaaccacacgtataaatgaagtagctgaatcttgctgcttcccacatgtgcatcgggtatataaattaaggcctcttcattttgttgattcaaaaaggttgttTctgaagagaatttttggtctggaggaatgtccatcacacctgactgaagtttgttgtaatatattggcaaaatgtgatggtttaccgttggcaactattgcaatatccggtttattggctacaaaagcaccgacagaagatcaatggaatcaagtggaaaagtcaattggttatgcattggaaagaaacgaggatgtcaatggaatgataaggatactgtcgcttagttactttgatcttcctcataacttgcgtacatgtctattatatctatgtacatttccagaagattatATtattcataaaaaacggttggttagaagatggattgcagagggatttattcacgaggaacatggacatactttatatgaattggggcagaggtgtttcaatgagctgatcaatagaagtttgattgagccaaggtatattggcaagttcggtgaggtgaaatcctgtcgagttcatgatacgattcttgatttcatccggtcaaagtctattgaagagaacttcgtaaccttgttaggaattcctaacgttcctattgatcggcagaagaaggtccggcggctatccctccttgttaatactgaagagtattatagcagtttggaggagaataacataaaatatgtcctggataaaaaagaagatgatagcaatgagcaggaagataacagtaacggttttcatatcctaaaaaagttgaatttgtgcaatgctcgattgctaactatttttccacattctgtgaaagtcccatctttgttgcaatttaggcggttgcgtgtgctcgactttgaaggCtgtgagcagttagaaaatcatcaccttgcaaatatagagaatttattgcacctgaagtacctcagcatcaaagatacaattgttaatgtgcttccgactcaaataacaagactacaatatttacagacattgaatgtagatgtaagagggGcaattaacattccaacacatatttatcgacttcgacaactgacttatctacttgttgatatgagatgtcaactgccggctaaaattgggaacatgcaagcattgcaagagctcaaagttgtgaatgtgcttgcgcagtcactgaacacgctgcaaggacttggtaaattaacaaacctgaggaagcttagtatatttatgcctggccatcacgctgatgcggcagaaagatacaagggtcatatgaaagcaatgatctcttcCatatgtaagctaggcagaGAcaaccttcattgtctaacaattcatatttcatctgtataa
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| Protein seq | MEGFLVTAATGALKSVLVKLAAMAGDTRSNGVRGQISFLADEFAAMHAFVLRMSDSEEENADPQDKAWMREVRELSYDIEDSLDEFMLHLDGESANPDGFIDKCRNLLAKIVARHRIPKMIGEFKAQIKQVGERNARYRSNGGISLRTANATVDQRALTIFQDVSSLVGIDLPKKELIDLLMKDDGHVASEHLRVISIVGIGGLGKTTIANLIFEELKEQFDCSAFVSVSRNPDISGILRIILNEVSAEPYGNTESGDIQQLIRKITTSLKNKRYLIVIDDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKRLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLIEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSSLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLRVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLQYLQTLNVDVRGAINIPTHIYRLRQLTYLLVDMRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSV |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_08g0013370 | OsGoSa_08g0013370.01 | Chr08 | 18363748 | 18369337 | - | NAM | ||
| CDS seq | atggaggggtttctggtgaccgcggccaccggggcactcaagtccgtgctggtgaagctcgccgccatggctggcgacacgcgctccaacggggtgcgcggccaaatcagtttcctcgccgacgagttcgccgccatgcacgcgttcgtcctcaggatgtcggattcggaggaggagaacgctgaccctcaggacaaggcctggatgagggaggtgcgggagctctcctacgacatcgaggacagcctcgacgagttcatgctccatctagatggcgaatccgctaatccagatgggttcatcgacaaatgcaggaatttgctggccaagatcgtggcgcggcatcggattccaaagatgattggagagttcaaggcacaaatcaaacaagttggggagagaaatgcaaggtacaggagcaatggtgggatcagtttgaggacagccaatgcgactgtagaccaaagagctcttaccatctttcaggatgtgtcatctctagttggaattgatctgccgaagaaggagctcattgatttgttgatgaaagatgatgggcatgtggcatccgagcatctaagggtcatatccatcgttggaattgggggattagggaagacaacgatcgcaaacctcatctttgaggagctgaaggagcaattcgattgttctgcttttgtgtctgtgtcaagaaaccctgacatctctggaatcttgagaattattctcaatgaagttagtgccgaaccttatggcaacactgaatcaggggacatacaacaactcattagaaaaatcactacgtcccttaagaacaaaaggtatcttattgtgattgatgacttatggaatatagaaagttggaaaattattagatgtgctttttcaagaagtattactggcagccgaatcatcacaaccacacgtataaatgaagtagctgaatcttgctgcttcccacatgtgcatcgggtatataaattaaggcctcttcattttgttgattcaaaaaggttgttTctgaagagaatttttggtctggaggaatgtccatcacacctgactgaagtttgttgtaatatattggcaaaatgtgatggtttaccgttggcaactattgcaatatccggtttattggctacaaaagcaccgacagaagatcaatggaatcaagtggaaaagtcaattggttatgcattggaaagaaacgaggatgtcaatggaatgataaggatactgtcgcttagttactttgatcttcctcataacttgcgtacatgtctattatatctatgtacatttccagaagattatATtattcataaaaaacggttggttagaagatggattgcagagggatttattcacgaggaacatggacatactttatatgaattggggcagaggtgtttcaatgagctgatcaatagaagtttgattgagccaaggtatattggcaagttcggtgaggtgaaatcctgtcgagttcatgatacgattcttgatttcatccggtcaaagtctattgaagagaacttcgtaaccttgttaggaattcctaacgttcctattgatcggcagaagaaggtccggcggctatccctccttgttaatactgaagagtattatagcagtttggaggagaataacataaaatatgtcctggataaaaaagaagatgatagcaatgagcaggaagataacagtaacggttttcatatcctaaaaaagttgaatttgtgcaatgctcgattgctaactatttttccacattctgtgaaagtcccatctttgttgcaatttaggcggttgcgtgtgctcgactttgaaggCtgtgagcagttagaaaatcatcaccttgcaaatatagagaatttattgcacctgaagtacctcagcatcaaagatacaattgttaatgtgcttccgactcaaataacaagactacaatatttacagacattgaatgtagatgtaagagggGcaattaacattccaacacatatttatcgacttcgacaactgacttatctacttgttgatatgagatgtcaactgccggctaaaattgggaacatgcaagcattgcaagagctcaaagttgtgaatgtgcttgcgcagtcactgaacacgctgcaaggacttggtaaattaacaaacctgaggaagcttagtatatttatgcctggccatcacgctgatgcggcagaaagatacaagggtcatatgaaagcaatgatctcttcCatatgtaagctaggcagaGAcaaccttcattgtctaacaattcatatttcatctgtataa
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| Protein seq | MEGFLVTAATGALKSVLVKLAAMAGDTRSNGVRGQISFLADEFAAMHAFVLRMSDSEEENADPQDKAWMREVRELSYDIEDSLDEFMLHLDGESANPDGFIDKCRNLLAKIVARHRIPKMIGEFKAQIKQVGERNARYRSNGGISLRTANATVDQRALTIFQDVSSLVGIDLPKKELIDLLMKDDGHVASEHLRVISIVGIGGLGKTTIANLIFEELKEQFDCSAFVSVSRNPDISGILRIILNEVSAEPYGNTESGDIQQLIRKITTSLKNKRYLIVIDDLWNIESWKIIRCAFSRSITGSRIITTTRINEVAESCCFPHVHRVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEVCCNILAKCDGLPLATIAISGLLATKAPTEDQWNQVEKSIGYALERNEDVNGMIRILSLSYFDLPHNLRTCLLYLCTFPEDYIIHKKRLVRRWIAEGFIHEEHGHTLYELGQRCFNELINRSLIEPRYIGKFGEVKSCRVHDTILDFIRSKSIEENFVTLLGIPNVPIDRQKKVRRLSLLVNTEEYYSSLEENNIKYVLDKKEDDSNEQEDNSNGFHILKKLNLCNARLLTIFPHSVKVPSLLQFRRLRVLDFEGCEQLENHHLANIENLLHLKYLSIKDTIVNVLPTQITRLQYLQTLNVDVRGAINIPTHIYRLRQLTYLLVDMRCQLPAKIGNMQALQELKVVNVLAQSLNTLQGLGKLTNLRKLSIFMPGHHADAAERYKGHMKAMISSICKLGRDNLHCLTIHISSV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 5.256235 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0372700 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g28460 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0372700 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0013950 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0013850 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0013820 | RBH | 0.000000 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0014120 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0013810 | RBH | 0.319448 | 1.053732 | 2.538685 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0013860 | RBH | 0.0 | 0.207822 | 0.071550 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0296600 | RBH | 0.627192 | 2.404151 | 2.5652645 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0013360 | RBH | 0.0 | 0.074159 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0013430 | RBH | 0.0 | 2.518415 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0005530 | RBH | 2.888930 | 8.262422 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0014160 | RBH | 0.0 | 0.0 | 0.095778 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0013480 | RBH | 0.0 | 1.269453 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G013560 | RBH | 0.000000 | 1.926394 | 0.728416 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0013640 | RBH | 0.0 | 0.0 | 0.239521 |
