Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_07g0028420 | OGI:07079520 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr07:29118334-29122145 | ||||||||
| Gene Symbol | CIPK03, OsCIPK03, CIPK3, OsCIPK3, OsSnRK3.27, SnRK3.27 | ||||||||||
| DNA seq | gttcttctgttcttgaatgctccggactccatagatcacccttcttctcccaaaggtatgtccagttcttcagcattagttcctgttccttctacctctattagttacgccactcgccggaggagaggaatgctgtttctcattccagatgcaagggaattccatttggctcctgactgcgattaactatgtctccagctgcttgcatgtgcagcattctttcggtatttcgttccattctgtcaaggaatacatggaaagataaaaggactcgattttgacctatttcaagggttcgaatatggcttgttttgattgaacatggctccgtgttttcttcctaatacatgaacaatgaacatgatgttttattatttgttagctagtgccttcagattttggtttctttttttaaaccggcgtctacatcctgaaatggatgtacacagccaatactttgatttcttgttttgctggttatattaggtcgattccatcagcgtttaatttctgcacttctgcaaatttttaggagattctagggactaaaagcttgcaccttgcagattagcttacagttagatttttctttcatactatttgatacaatctcagttggaattttcatttgcaatgaaatttcgtatttctactgcaatggattattgttatctccttttgattaatagctttccattcagattcaacataatgcaatatcttctgtttttctatgtgctgaccatcaaatggtcaagctttatgaaaataaatcttgtaatattccctgtcagattcagttgaagtctagtttgaaggaatgattttttttttttgactgaggaaagatttttttttctggaagatgtataaggctaaaaggactgctgcccagaaagtaaggcgctgccttggaaaatatgagcttggacgcgcaattggtcaaggaacttttgcaaaggttaggtttgcaaagaacatggagactggtgatcatgttgctattaagatccttgacaaagcgaaggttcagaagcacagattagtcgaacaggttattttcagagtcagataattactcacaatattttgttctactttcctagatttttcgcaacaacgaaaatagccaaaagtatctagaaaaaaaatattcctgtgtacgcgccagctgtgctcatgccactctaaagtctaaactctattgcagattagacgggaaatttgtacgatgaagttgatacaacaccccaatgttgttcacctgcatgaggtaaatctaaagcatgagagacaagaatatatctttcattattaccatgttgctagtttgaaactttgtgcagtagtacacccaagccttctgtttatgataacttggattacttttgtggtgttttataacaggtgatgggaagtaaaacaaggattttcattgttctagaatatgtgatgggaggagagctccatgatattattgttagtactattatacctctgaggctctgatcccctgtatgacatttttccattgcagtatctgtaattgaagtaatctccacttactttttttttgcatgacaattaagtgaatttcaataacttcataaattataaccaggccacaagtggaaggttgaaggaggatgaagcacggaaatactttcagcaactgatcaacgccgtagattactgccacagtaggggtgtataccacagagacctgaaggtctagtgttaaccccattgctctggtttataagttataactatgatctggcataaacaattggaaattgacaaattgatgttttatgcatgacagttagagaatttgttgcttgatactgccgggaacatcaaagtctcggactttggcctaagtgctatatctgagcaagtgaaggtaatatcacacaactactcgaaagttaaaaaaaaaaggttcctgcacatctatattgtttctatgtcgattgattgccttttttactgtgtgtgtgtgtcaattaacttcaactctgtcaggctgatggattactacatactacatgtggaacacctaattatgttgctcctgaggtaacatttgcttgtacaacttctcttatttttctttatccagaaatgagtttctcctataataaatatctttctgttttgtaggttattgaagataagggctacgatggtgctcttgcagacctttggtcatgtggagtaattctttttgtgctgcttgcaggatatcttccttttgaggatgaaaatattgtctccctttataacaaggtaaatttagaaatttaaccaaatcttgaacaccaatataccaggttatgatacattttttttttgtcattccgatgacagatttctggagctcagtttacttgtccctcttggttttctgctgaagctaagaggctcattgctagaattctggatccaaatcctgctactgtaagttttttgacacttacaaaatgtggatagaagctcttacagaagtgacattttgaagtttgtttaaactttaaatcttttattttttatcactgattgtactgactagataaagttgcaatttggatcagtaatcagtgcccaaaattacttgtttcttcttacttggttttctttgttgccaaccagcggataactacttctcaagtgctacaagatcaatggttcaaaaaaggctatgagtcccctgttttcgatgacaaatattacccttatttccacgatgtttatgatgcttttggagactcagaagtgagttaattaatcaatagtattatatctacaagggtacttatccttttgtgcttcagatgttcataatcttaaatataccgtctaataaatttgccaggaaaaacatgtgaaagaggctatggaagagcagccaaccttgatgaatgcctttgagttgatttcactaaataagggtctgaatctagacaatttttttgagtctgataaggtaaggatcttttctgattgcagcagtatggttaatgagccagtgggcagtgggatcaaatatgcacgtatcataaacatttttcataaattacttcagaaactatgcaattattgcagtggactcacttttttatttaaacatgacagaagtacaagagagagacaagatttacatcgcagtgccctccgaaagaaatcatcaataggatcgaagaagctgctaacttactaggatttaatattcagaagagaaactacagggtatgctaagaatccttgcaagtaatgtttctcttactagtaccactttcagctcatttgtacaaactatgaagaagttgaatatcacaatgtgagattacctttatcacccctgcgctgcgtcctgaaccatgacaagcatctcactcgtttttttctactgttctatttagatgagaatggagaatataaaggaaggaagaaaaggacatctaaacattgcaactgaggtatagaaaacacaaaattaaagaagatatctgtcacaagaaacatgaggattgatcaaaatattatcccgctgtataggttttccaagtggcaccatccttacatgtggttgagctcaaaaaggccaagggagataccctggagtttcaaaaggtatatgtctatcaatggggttactcttattatggtcaattgatcaccttcagttttgtttaaatgacaaagtaactgagcaaaattattactatgaacagttctaccaaacgctctcgacgcaactaaaagatgttgtttgggaattagaagatgcggctgaggatatgagctaa
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| CDS seq | atgtataaggctaaaaggactgctgcccagaaagtaaggcgctgccttggaaaatatgagcttggacgcgcaattggtcaaggaacttttgcaaaggttaggtttgcaaagaacatggagactggtgatcatgttgctattaagatccttgacaaagcgaaggttcagaagcacagattagtcgaacagattagacgggaaatttgtacgatgaagttgatacaacaccccaatgttgttcacctgcatgaggtgatgggaagtaaaacaaggattttcattgttctagaatatgtgatgggaggagagctccatgatattattgccacaagtggaaggttgaaggaggatgaagcacggaaatactttcagcaactgatcaacgccgtagattactgccacagtaggggtgtataccacagagacctgaagttagagaatttgttgcttgatactgccgggaacatcaaagtctcggactttggcctaagtgctatatctgagcaagtgaaggctgatggattactacatactacatgtggaacacctaattatgttgctcctgaggttattgaagataagggctacgatggtgctcttgcagacctttggtcatgtggagtaattctttttgtgctgcttgcaggatatcttccttttgaggatgaaaatattgtctccctttataacaagatttctggagctcagtttacttgtccctcttggttttctgctgaagctaagaggctcattgctagaattctggatccaaatcctgctactcggataactacttctcaagtgctacaagatcaatggttcaaaaaaggctatgagtcccctgttttcgatgacaaatattacccttatttccacgatgtttatgatgcttttggagactcagaagaaaaacatgtgaaagaggctatggaagagcagccaaccttgatgaatgcctttgagttgatttcactaaataagggtctgaatctagacaatttttttgagtctgataagaagtacaagagagagacaagatttacatcgcagtgccctccgaaagaaatcatcaataggatcgaagaagctgctaacttactaggatttaatattcagaagagaaactacaggatgagaatggagaatataaaggaaggaagaaaaggacatctaaacattgcaactgaggttttccaagtggcaccatccttacatgtggttgagctcaaaaaggccaagggagataccctggagtttcaaaagttctaccaaacgctctcgacgcaactaaaagatgttgtttgggaattagaagatgcggctgaggatatgagctaa
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| Protein seq | MYKAKRTAAQKVRRCLGKYELGRAIGQGTFAKVRFAKNMETGDHVAIKILDKAKVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGELHDIIATSGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDTAGNIKVSDFGLSAISEQVKADGLLHTTCGTPNYVAPEVIEDKGYDGALADLWSCGVILFVLLAGYLPFEDENIVSLYNKISGAQFTCPSWFSAEAKRLIARILDPNPATRITTSQVLQDQWFKKGYESPVFDDKYYPYFHDVYDAFGDSEEKHVKEAMEEQPTLMNAFELISLNKGLNLDNFFESDKKYKRETRFTSQCPPKEIINRIEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELEDAAEDMS |
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| Function | CBL-interacting protein kinase 3 [UniProtKB/Swiss-Prot:Q8LIG4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0028420 | OsLiXu_07g0028420.01 | Chr07 | 29118334 | 29122145 | + | NAM | ||
| CDS seq | atgtataaggctaaaaggactgctgcccagaaagtaaggcgctgccttggaaaatatgagcttggacgcgcaattggtcaaggaacttttgcaaaggttaggtttgcaaagaacatggagactggtgatcatgttgctattaagatccttgacaaagcgaaggttcagaagcacagattagtcgaacagattagacgggaaatttgtacgatgaagttgatacaacaccccaatgttgttcacctgcatgaggtgatgggaagtaaaacaaggattttcattgttctagaatatgtgatgggaggagagctccatgatattattgccacaagtggaaggttgaaggaggatgaagcacggaaatactttcagcaactgatcaacgccgtagattactgccacagtaggggtgtataccacagagacctgaagttagagaatttgttgcttgatactgccgggaacatcaaagtctcggactttggcctaagtgctatatctgagcaagtgaaggctgatggattactacatactacatgtggaacacctaattatgttgctcctgaggttattgaagataagggctacgatggtgctcttgcagacctttggtcatgtggagtaattctttttgtgctgcttgcaggatatcttccttttgaggatgaaaatattgtctccctttataacaagatttctggagctcagtttacttgtccctcttggttttctgctgaagctaagaggctcattgctagaattctggatccaaatcctgctactcggataactacttctcaagtgctacaagatcaatggttcaaaaaaggctatgagtcccctgttttcgatgacaaatattacccttatttccacgatgtttatgatgcttttggagactcagaagaaaaacatgtgaaagaggctatggaagagcagccaaccttgatgaatgcctttgagttgatttcactaaataagggtctgaatctagacaatttttttgagtctgataagaagtacaagagagagacaagatttacatcgcagtgccctccgaaagaaatcatcaataggatcgaagaagctgctaacttactaggatttaatattcagaagagaaactacaggatgagaatggagaatataaaggaaggaagaaaaggacatctaaacattgcaactgaggttttccaagtggcaccatccttacatgtggttgagctcaaaaaggccaagggagataccctggagtttcaaaagttctaccaaacgctctcgacgcaactaaaagatgttgtttgggaattagaagatgcggctgaggatatgagctaa
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| Protein seq | MYKAKRTAAQKVRRCLGKYELGRAIGQGTFAKVRFAKNMETGDHVAIKILDKAKVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGELHDIIATSGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDTAGNIKVSDFGLSAISEQVKADGLLHTTCGTPNYVAPEVIEDKGYDGALADLWSCGVILFVLLAGYLPFEDENIVSLYNKISGAQFTCPSWFSAEAKRLIARILDPNPATRITTSQVLQDQWFKKGYESPVFDDKYYPYFHDVYDAFGDSEEKHVKEAMEEQPTLMNAFELISLNKGLNLDNFFESDKKYKRETRFTSQCPPKEIINRIEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELEDAAEDMS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0687000 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g48760 | RBH | 0.000000 | 0.090830 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0687000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0028270 | RBH | 0.0 | 2.665581 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0028310 | RBH | 0.000000 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0028110 | RBH | 0.0 | 2.130435 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0027920 | RBH | 0.000000 | 0.153360 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0028200 | RBH | 0.000000 | 7.132965 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0474900 | RBH | 0.344433 | 1.0609415 | 0.825963 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0028650 | RBH | 0.0 | 0.128722 | 0.045513 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0488900 | RBH | 0.773341 | 3.5697865 | 5.567194 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0027910 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0028390 | RBH | 0.0 | 4.263675 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0028090 | RBH | 0.0 | 6.243912 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0015460 | RBH | 13.775452 | 0.838290 | 8.522652 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0027990 | RBH | 0.0 | 2.140919 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G028050 | RBH | 0.0 | 1.596246 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0027820 | RBH | 0.0 | 0.000000 | 0.0 |
