Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_07g0018290 | OGI:07058990 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr07:21263620-21267280 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcgccggcgattctcggtcgttcatgccgttcttctcctcgcggcggtcgcgctgccgcacttcgccgccaggccgtggcccctacgctgcaccggcggcaactgcagtgccgtgagcagctacaaatccaatctcccaacacccacgatcaaccttggcaagagcctcttcgcctcccggGcgagccgcgccctcagctccgcatccaccgccaacagcagctccgacgtcgtcgtcgcctacgaccgcgcggtcatcgagctcctcaacgccaccgtgcagtacgcggtggagaactccacgaggctgttcgccacgggcctgcgggtgggcaccgacccggggttcagcaagatctactccatggcgcagtgctcgccggacctgttgccggcgcagtgccggagctgcctcgacggcctcgtgggccagtggtggaagacgttcccgctgaacgggcagggggcgagggtcgccggcccgcgctgctacctgaggtccgagctgggccccttctacaccggcagcccgatggtgctgttgccgttgccggtcaaggccagcgggctcacgccggcgccgtcgccgtcgccggatgttgtgcctgccattacgggaggtaattatacttccttgtcgctcatgctgtctcaattattcagtcttcacgtcatcatcgcacataagattctctcgtccaatttgtgcacattacattcttcaccgagaacaagaagatgatgtagaagggagttaatcccccgtattgtttcctccatacatctaaattaatcagagtcagatgccatgtttaaaagataatatcgttatatatttaaaaacaaaggaggtatatataatactatatatgttaatcaatgctcaataggtttgtaactcggactctgatcataaacggattgcaagatgctaatcgttttcttttgtcggcatatataatacatataactaacggcacgaagaactctatttggttcattgagcagcagctagcactgtattattgtaatcaggtgctcagatcggagatgcagtgcttcacatactttaactgattatgttacctgcaaaaatgcaggtaagcgtaattcagcaagcaaaattctggtaattatcattccaatacttgccattgcaatcctagctgcaatttccctctgtatatggaatatgtgtaagaaggtcagatcgagaaaagccgcaaagcgtttctccagacgtgagtcgttttctactcgtttgccataaattcctgtcaaattccatttaacattcttaataatcagtatccactaaaattgttaatttgccaggtgatgaagttgaggaatttgaaagttttaggtcaaccttattatctctgacatcagtacaagtggcaacagataacttccacgaaagcaagaaaatcggtgaggggggcttcggcgcagtttataaggtatggcagtagactttcggtctaacttttgaatcattgttgttttaaccgtgtaattcaacattttcgaaaaataaattccaaatgtaccagggcactagtgctcagttgttaagtttttctgaaatttactagctgctgcacctgcctgcctaacaggcccatgcatggttgcaggtttgacatgtaggccccaacagaccctcgggttcatatatcaattagcgatctccattgaacaagtctatatataagtaagaaaataagatatttaactaaattatatagggacttctttccggacaagaagtggctgtgaagaggttggtgaagggttcagaccaagaggggcaggaagaggtaaaaaatgagctaactctgatggccaaccttcatcacaggaatcttgtccaacttgagggtttttgccttgaggcaggagagaggctgcttgtatacgagtacatgcccaacaagagtctcgacacgtttctttttggtacgatcaacatgacctttgaatgtagatcgatgtagcatacttttttcttgagcagtactaaacttttttttacatatcctctcttactgtaaagttagagcccactacatcctaaaacttaacatgcaaagataccatgtcgtcatacactaacaattagtacatttaaacatcatacaagtatgttatattatctataatttttttaatttattaaagtttatagcttttcaaatgcaaacatgttaaatcatcatatcacataattcatataatatttcaacatgtctcttcatcttctctttataatatatctttcatatatacttatatagttcatcctgactccgaacttagttaatgtgctctttctcttcttttattaaaccgtatcacatcaattgttttgtccttaaatgattatgtaaggtctaaattatcttcctccttttgttctcttattaagtcatatcatatcaattgtttgtagctcttagatgattaatctatgatccaagcaatctctctccttttcttctctcataaagccacatcaacttacttttacatttaaattattatttttatatactatttaaatttaaattatcataaaccagacttacaaaccacatcaacttacttaagtttatattgtctagctatcttacacattacttttacttagtgctatcatactaaactcccgcaacaaaacgtggggtttcacctagttaaattatattatggatgtcaataaatgatctcttcatctggtgttgatgagtagacacagagcaaaggaagcgactagattgggcaacacgattcaagatcatagaaggcgttgctcgaggattgcagtatcttcatgaggactcccaaaagaagattgtccaccgtgacatgaaggcaagcaatgtcttgctagatgcaaatatgaatcccaagattggcgattttggccttgctaggctcttccaacaggaccagactcgagatgtcaccgaccatatcgtcggtacattgtaattaagtcgaacacttgatctattttttgcacttggacttcaccttacctagaaatttaaccatgctacttctccctttgctatatgcagtggctacatgcctcctgagtatatgatgtgtggacagtattctacaaaatcagacgtgtttagctttggcattcttgtcatcgagatcgtgacaggccggaggaacaatgagcctgatttctctgaggaaaatgaagaaatagtgagcattgtgagtacacgtgctaattaactcatatagcaatacaccatattgctttgctttgtgtacttgcattttgtagataggtatatatggtcaccaatatcgtcattactactgatttatgaagacatatatgtgactatattgctaggtacgaaagcattgggaagacggaacaactgcagagctggtagaccattctttggaaagaaactattcagaatcagagatgctgaaatgcgtcaacattggacttctgtgtgcccaggagaaccctatagaccggcctacaatggcgcatgttatggttttgcttaacagtgattctacctgtttccttgatgctcatgcgaggccaacatatttcatggatgggagctctagttatccttccgaaacacaatcctctactgagtaataggggctaa
More
|
||||||||||
| CDS seq | atgcgccggcgattctcggtcgttcatgccgttcttctcctcgcggcggtcgcgctgccgcacttcgccgccaggccgtggcccctacgctgcaccggcggcaactgcagtgccgtgagcagctacaaatccaatctcccaacacccacgatcaaccttggcaagagcctcttcgcctcccggGcgagccgcgccctcagctccgcatccaccgccaacagcagctccgacgtcgtcgtcgcctacgaccgcgcggtcatcgagctcctcaacgccaccgtgcagtacgcggtggagaactccacgaggctgttcgccacgggcctgcgggtgggcaccgacccggggttcagcaagatctactccatggcgcagtgctcgccggacctgttgccggcgcagtgccggagctgcctcgacggcctcgtgggccagtggtggaagacgttcccgctgaacgggcagggggcgagggtcgccggcccgcgctgctacctgaggtccgagctgggccccttctacaccggcagcccgatggtgctgttgccgttgccggtcaaggccagcgggctcacgccggcgccgtcgccgtcgccggatgttgtgcctgccattacgggaggtaagcgtaattcagcaagcaaaattctggtaattatcattccaatacttgccattgcaatcctagctgcaatttccctctgtatatggaatatgtgtaagaaggtcagatcgagaaaagccgcaaagcgtttctccagacgtgatgaagttgaggaatttgaaagttttaggtcaaccttattatctctgacatcagtacaagtggcaacagataacttccacgaaagcaagaaaatcggtgaggggggcttcggcgcagtttataagaggttggtgaagggttcagaccaagaggggcaggaagaggtaaaaaatgagctaactctgatggccaaccttcatcacaggaatcttgtccaacttgagggtttttgccttgaggcaggagagaggctgcttgtatacgagtacatgcccaacaagagtctcgacacgtttctttttgaaggcgttgctcgaggattgcagtatcttcatgaggactcccaaaagaagattgtccaccgtgacatgaaggcaagcaatgtcttgctagatgcaaatatgaatcccaagattggcgattttggccttgctaggctcttccaacaggaccagactcgagatgtcaccgaccatatcgtcggtacatttggctacatgcctcctgagtatatgatgtgtggacagtattctacaaaatcagacgtgtttagctttggcattcttgtcatcgagatcgtgacaggccggaggaacaatgagcctgatttctctgaggaaaatgaagaaatagtgagcattgtacgaaagcattgggaagacggaacaactgcagagctggtagaccattctttggaaagaaactattcagaatcagagatgctgaaatgcgtcaacattggacttctgtgtgcccaggagaaccctatagaccggcctacaatggcgcatgttatggttttgcttaacagtgattctacctgtttccttgatgctcatgcgaggccaacatatttcatggatgggagctctagttatccttccgaaacacaatcctctactgagtaa
More
|
||||||||||
| Protein seq | MRRRFSVVHAVLLLAAVALPHFAARPWPLRCTGGNCSAVSSYKSNLPTPTINLGKSLFASRASRALSSASTANSSSDVVVAYDRAVIELLNATVQYAVENSTRLFATGLRVGTDPGFSKIYSMAQCSPDLLPAQCRSCLDGLVGQWWKTFPLNGQGARVAGPRCYLRSELGPFYTGSPMVLLPLPVKASGLTPAPSPSPDVVPAITGGKRNSASKILVIIIPILAIAILAAISLCIWNMCKKVRSRKAAKRFSRRDEVEEFESFRSTLLSLTSVQVATDNFHESKKIGEGGFGAVYKRLVKGSDQEGQEEVKNELTLMANLHHRNLVQLEGFCLEAGERLLVYEYMPNKSLDTFLFEGVARGLQYLHEDSQKKIVHRDMKASNVLLDANMNPKIGDFGLARLFQQDQTRDVTDHIVGTFGYMPPEYMMCGQYSTKSDVFSFGILVIEIVTGRRNNEPDFSEENEEIVSIVRKHWEDGTTAELVDHSLERNYSESEMLKCVNIGLLCAQENPIDRPTMAHVMVLLNSDSTCFLDAHARPTYFMDGSSSYPSETQSSTE |
||||||||||
| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q0D5R2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_07g0018290 | OsLiXu_07g0018290.01 | Chr07 | 21263620 | 21267280 | + | NAM | ||
| CDS seq | atgcgccggcgattctcggtcgttcatgccgttcttctcctcgcggcggtcgcgctgccgcacttcgccgccaggccgtggcccctacgctgcaccggcggcaactgcagtgccgtgagcagctacaaatccaatctcccaacacccacgatcaaccttggcaagagcctcttcgcctcccggGcgagccgcgccctcagctccgcatccaccgccaacagcagctccgacgtcgtcgtcgcctacgaccgcgcggtcatcgagctcctcaacgccaccgtgcagtacgcggtggagaactccacgaggctgttcgccacgggcctgcgggtgggcaccgacccggggttcagcaagatctactccatggcgcagtgctcgccggacctgttgccggcgcagtgccggagctgcctcgacggcctcgtgggccagtggtggaagacgttcccgctgaacgggcagggggcgagggtcgccggcccgcgctgctacctgaggtccgagctgggccccttctacaccggcagcccgatggtgctgttgccgttgccggtcaaggccagcgggctcacgccggcgccgtcgccgtcgccggatgttgtgcctgccattacgggaggtaagcgtaattcagcaagcaaaattctggtaattatcattccaatacttgccattgcaatcctagctgcaatttccctctgtatatggaatatgtgtaagaaggtcagatcgagaaaagccgcaaagcgtttctccagacgtgatgaagttgaggaatttgaaagttttaggtcaaccttattatctctgacatcagtacaagtggcaacagataacttccacgaaagcaagaaaatcggtgaggggggcttcggcgcagtttataagaggttggtgaagggttcagaccaagaggggcaggaagaggtaaaaaatgagctaactctgatggccaaccttcatcacaggaatcttgtccaacttgagggtttttgccttgaggcaggagagaggctgcttgtatacgagtacatgcccaacaagagtctcgacacgtttctttttgaaggcgttgctcgaggattgcagtatcttcatgaggactcccaaaagaagattgtccaccgtgacatgaaggcaagcaatgtcttgctagatgcaaatatgaatcccaagattggcgattttggccttgctaggctcttccaacaggaccagactcgagatgtcaccgaccatatcgtcggtacatttggctacatgcctcctgagtatatgatgtgtggacagtattctacaaaatcagacgtgtttagctttggcattcttgtcatcgagatcgtgacaggccggaggaacaatgagcctgatttctctgaggaaaatgaagaaatagtgagcattgtacgaaagcattgggaagacggaacaactgcagagctggtagaccattctttggaaagaaactattcagaatcagagatgctgaaatgcgtcaacattggacttctgtgtgcccaggagaaccctatagaccggcctacaatggcgcatgttatggttttgcttaacagtgattctacctgtttccttgatgctcatgcgaggccaacatatttcatggatgggagctctagttatccttccgaaacacaatcctctactgagtaa
More
|
|||||||
| Protein seq | MRRRFSVVHAVLLLAAVALPHFAARPWPLRCTGGNCSAVSSYKSNLPTPTINLGKSLFASRASRALSSASTANSSSDVVVAYDRAVIELLNATVQYAVENSTRLFATGLRVGTDPGFSKIYSMAQCSPDLLPAQCRSCLDGLVGQWWKTFPLNGQGARVAGPRCYLRSELGPFYTGSPMVLLPLPVKASGLTPAPSPSPDVVPAITGGKRNSASKILVIIIPILAIAILAAISLCIWNMCKKVRSRKAAKRFSRRDEVEEFESFRSTLLSLTSVQVATDNFHESKKIGEGGFGAVYKRLVKGSDQEGQEEVKNELTLMANLHHRNLVQLEGFCLEAGERLLVYEYMPNKSLDTFLFEGVARGLQYLHEDSQKKIVHRDMKASNVLLDANMNPKIGDFGLARLFQQDQTRDVTDHIVGTFGYMPPEYMMCGQYSTKSDVFSFGILVIEIVTGRRNNEPDFSEENEEIVSIVRKHWEDGTTAELVDHSLERNYSESEMLKCVNIGLLCAQENPIDRPTMAHVMVLLNSDSTCFLDAHARPTYFMDGSSSYPSETQSSTE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.244132 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0541900 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35770 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0541900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018290 | SBH | 0.0 | 1.561455 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0018220 | SBH | 0.000000 | 2.957791 | 0.279189 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0018190 | SBH | 0.0 | 26.989252 | 0.682892 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0018060 | RBH | 0.0 | 0.679471 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0018210 | SBH | 0.000000 | 15.029716 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0351400 | SBH | 0.309316 | 19.3094625 | 2.687566 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018700 | SBH | 0.025613 | 0.614638 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0361900 | SBH | 0.3760645 | 17.520449 | 0.218801 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017940 | SBH | 0.026354 | 0.135489 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0018130 | SBH | 0.0 | 5.208980 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0018010 | SBH | 0.0 | 12.870400 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018310 | SBH | 0.0 | 0.519603 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0018090 | SBH | 0.000000 | 5.407125 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G018000 | SBH | 0.072686 | 2.993767 | 0.096241 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0018080 | SBH | 0.086080 | 8.247792 | 0.0 |
